Marker Genes
Dataset: Single-cell transcriptomics reveals gene expression dynamics of human fetal kidney development
- tissue: Kidney
- ontology: Kidney
- genotype: -
- stage: Fetal
- treatment condition: WT
- cell/nucleus: Cells
- pmid: 30789893
- subset name: wk16
- total genes: Not reported
- clustering: scran
- pseudotime: Monocle 2
- link: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE114530
Rows:100
| dataset id | cluster id | cluster name | cell type name | sample id | gene symbol | entrez geneid | species specific geneid |
avg log fc (?)
|
pct 1 | pct 2 | p value | padj |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 74 | 4 | ICa | Interstitial cells a | wk16 | TAGLN | 6876 | 11553 | 1.31 | 0.6 | 0.12 | 4.8985192514907E-225 | 1.6505070765973E-220 |
| 74 | 4 | ICa | Interstitial cells a | wk16 | LGALS1 | 3956 | 6561 | 1.3 | 0.97 | 0.35 | 9.1119470979823E-276 | 3.0701794551942E-271 |
| 74 | 4 | ICa | Interstitial cells a | wk16 | TPM2 | 7169 | 12011 | 1.25 | 0.8 | 0.23 | 1.3204159051897E-252 | 4.4490093509462E-248 |
| 74 | 4 | ICa | Interstitial cells a | wk16 | ACTA2 | 59 | 130 | 1.15 | 0.39 | 0.08 | 6.9939318776815E-132 | 2.356535406866E-127 |
| 74 | 4 | ICa | Interstitial cells a | wk16 | CYP1B1 | 1545 | 2597 | 1.13 | 0.68 | 0.14 | 2.2401188268912E-244 | 7.5478563753273E-240 |
| 74 | 4 | ICa | Interstitial cells a | wk16 | PCOLCE | 5118 | 8738 | 1.1 | 0.78 | 0.16 | 3.2880620363018E-284 | 1.1078796225115E-279 |
| 74 | 4 | ICa | Interstitial cells a | wk16 | COL1A1 | 1277 | 2197 | 1.09 | 0.83 | 0.21 | 1.298556386034E-248 | 4.3753558871029E-244 |
| 74 | 4 | ICa | Interstitial cells a | wk16 | COL1A2 | 1278 | 2198 | 1.08 | 0.82 | 0.19 | 5.1325134947663E-273 | 1.7293490969266E-268 |
| 74 | 4 | ICa | Interstitial cells a | wk16 | COL3A1 | 1281 | 2201 | 1.01 | 0.79 | 0.21 | 9.7868114966225E-222 | 3.297568265672E-217 |
| 74 | 4 | ICa | Interstitial cells a | wk16 | MFAP4 | 4239 | 7035 | 0.98 | 0.72 | 0.18 | 1.421467652397E-213 | 4.7894931079865E-209 |
| 74 | 4 | ICa | Interstitial cells a | wk16 | PTN | 5764 | 9630 | 0.95 | 0.77 | 0.39 | 1.0174251970549E-119 | 3.4281124589568E-115 |
| 74 | 4 | ICa | Interstitial cells a | wk16 | PLAC9 | 219348 | 19255 | 0.94 | 0.59 | 0.11 | 1.801565798464E-214 | 6.0701958013447E-210 |
| 74 | 4 | ICa | Interstitial cells a | wk16 | OLFML3 | 56944 | 24956 | 0.94 | 0.66 | 0.14 | 8.2209302603539E-220 | 2.7699602419236E-215 |
| 74 | 4 | ICa | Interstitial cells a | wk16 | CALD1 | 800 | 1441 | 0.93 | 0.92 | 0.56 | 4.3508992624287E-163 | 1.4659919974827E-158 |
| 74 | 4 | ICa | Interstitial cells a | wk16 | CTSC | 1075 | 2528 | 0.88 | 0.76 | 0.28 | 5.7153156421599E-159 | 1.9257184524693E-154 |
| 74 | 4 | ICa | Interstitial cells a | wk16 | POSTN | 10631 | 16953 | 0.87 | 0.29 | 0.03 | 2.1932333519072E-151 | 7.3898804559159E-147 |
| 74 | 4 | ICa | Interstitial cells a | wk16 | EMCN | 51705 | 16041 | 0.85 | 0.53 | 0.12 | 1.7359857000701E-160 | 5.849230217816E-156 |
| 74 | 4 | ICa | Interstitial cells a | wk16 | SULT1E1 | 6783 | 11377 | 0.84 | 0.66 | 0.2 | 1.3637149767961E-140 | 4.5949012428168E-136 |
| 74 | 4 | ICa | Interstitial cells a | wk16 | FST | 10468 | 3971 | 0.83 | 0.35 | 0.09 | 4.9571733247719E-94 | 1.6702699800487E-89 |
| 74 | 4 | ICa | Interstitial cells a | wk16 | EMILIN1 | 11117 | 19880 | 0.82 | 0.54 | 0.11 | 9.7695662641001E-181 | 3.2917576570259E-176 |
| 74 | 4 | ICa | Interstitial cells a | wk16 | MMP2 | 4313 | 7166 | 0.81 | 0.55 | 0.13 | 2.7013437779096E-153 | 9.1019077252885E-149 |
| 74 | 4 | ICa | Interstitial cells a | wk16 | CXCL12 | 6387 | 10672 | 0.79 | 0.52 | 0.22 | 2.6280861946533E-71 | 8.855073624265E-67 |
| 74 | 4 | ICa | Interstitial cells a | wk16 | ITM2A | 9452 | 6173 | 0.79 | 0.4 | 0.11 | 7.0290501880604E-95 | 2.3683681703651E-90 |
| 74 | 4 | ICa | Interstitial cells a | wk16 | CLDN11 | 5010 | 8514 | 0.79 | 0.48 | 0.13 | 9.8482969268022E-110 | 3.3182851665167E-105 |
| 74 | 4 | ICa | Interstitial cells a | wk16 | COL6A3 | 1293 | 2213 | 0.78 | 0.58 | 0.16 | 9.837096361273E-142 | 3.3145112479673E-137 |
| 74 | 4 | ICa | Interstitial cells a | wk16 | IGF2 | 3481 | 5466 | 0.78 | 0.91 | 0.59 | 3.2987825405289E-127 | 1.1114917892058E-122 |
| 74 | 4 | ICa | Interstitial cells a | wk16 | TNC | 3371 | 5318 | 0.76 | 0.51 | 0.12 | 6.3830001871704E-142 | 2.1506880830652E-137 |
| 74 | 4 | ICa | Interstitial cells a | wk16 | MEG3 | 55384 | 14575 | 0.75 | 0.66 | 0.28 | 1.1162733749461E-95 | 3.7611715095434E-91 |
| 74 | 4 | ICa | Interstitial cells a | wk16 | C11orf96 | 387763 | 38675 | 0.72 | 0.38 | 0.11 | 2.9105173094989E-88 | 9.8066970226255E-84 |
| 74 | 4 | ICa | Interstitial cells a | wk16 | TGFBI | 7045 | 11771 | 0.71 | 0.47 | 0.11 | 4.5727037283755E-128 | 1.5407267942388E-123 |
| 74 | 4 | ICa | Interstitial cells a | wk16 | COL6A2 | 1292 | 2212 | 0.71 | 0.56 | 0.2 | 6.6556877379897E-106 | 2.2425674264383E-101 |
| 74 | 4 | ICa | Interstitial cells a | wk16 | MOXD1 | 26002 | 21063 | 0.7 | 0.53 | 0.15 | 4.1673443256864E-118 | 1.4041449970968E-113 |
| 74 | 4 | ICa | Interstitial cells a | wk16 | MDFI | 4188 | 6967 | 0.7 | 0.46 | 0.1 | 3.0398714150015E-135 | 1.0242542745706E-130 |
| 74 | 4 | ICa | Interstitial cells a | wk16 | FBLN5 | 10516 | 3602 | 0.7 | 0.44 | 0.1 | 7.5742428740946E-122 | 2.5520653939975E-117 |
| 74 | 4 | ICa | Interstitial cells a | wk16 | JUNB | 3726 | 6205 | 0.69 | 0.78 | 0.58 | 8.651364092128E-56 | 2.9149906172016E-51 |
| 74 | 4 | ICa | Interstitial cells a | wk16 | CCN1 | 3491 | 2654 | 0.67 | 0.78 | 0.54 | 4.0504534071452E-62 | 1.3647597710035E-57 |
| 74 | 4 | ICa | Interstitial cells a | wk16 | MGP | 4256 | 7060 | 0.67 | 0.16 | 0.02 | 1.0436489431114E-60 | 3.5164707489196E-56 |
| 74 | 4 | ICa | Interstitial cells a | wk16 | PRSS23 | 11098 | 14370 | 0.66 | 0.56 | 0.2 | 1.1934680583703E-96 | 4.0212712758728E-92 |
| 74 | 4 | ICa | Interstitial cells a | wk16 | GPC3 | 2719 | 4451 | 0.66 | 0.94 | 0.75 | 6.300187103513E-94 | 2.1227850426577E-89 |
| 74 | 4 | ICa | Interstitial cells a | wk16 | PDGFRA | 5156 | 8803 | 0.65 | 0.47 | 0.1 | 5.8898116978783E-138 | 1.9845131534831E-133 |
| 74 | 4 | ICa | Interstitial cells a | wk16 | EDNRA | 1909 | 3179 | 0.65 | 0.39 | 0.09 | 7.7229839857045E-112 | 2.6021822241433E-107 |
| 74 | 4 | ICa | Interstitial cells a | wk16 | BGN | 633 | 1044 | 0.64 | 0.42 | 0.11 | 3.0499713236269E-101 | 1.0276573377829E-96 |
| 74 | 4 | ICa | Interstitial cells a | wk16 | TMSB4X | 7114 | 11881 | 0.63 | 1 | 0.99 | 1.017493518481E-136 | 3.4283426611699E-132 |
| 74 | 4 | ICa | Interstitial cells a | wk16 | COL21A1 | 81578 | 17025 | 0.63 | 0.43 | 0.09 | 8.8647684355799E-125 | 2.9868950766843E-120 |
| 74 | 4 | ICa | Interstitial cells a | wk16 | SERPINH1 | 871 | 1546 | 0.63 | 0.82 | 0.54 | 4.9901269158589E-84 | 1.6813733630295E-79 |
| 74 | 4 | ICa | Interstitial cells a | wk16 | VIM | 7431 | 12692 | 0.63 | 0.97 | 0.84 | 2.240743630852E-92 | 7.5499615897928E-88 |
| 74 | 4 | ICa | Interstitial cells a | wk16 | LDB2 | 9079 | 6533 | 0.63 | 0.4 | 0.1 | 2.0235977766758E-104 | 6.8183103487315E-100 |
| 74 | 4 | ICa | Interstitial cells a | wk16 | MEIS2 | 4212 | 7001 | 0.63 | 0.72 | 0.39 | 5.8985410887415E-73 | 1.9874544344405E-68 |
| 74 | 4 | ICa | Interstitial cells a | wk16 | CNN2 | 1265 | 2156 | 0.63 | 0.54 | 0.26 | 1.0429361141545E-64 | 3.5140689430322E-60 |
| 74 | 4 | ICa | Interstitial cells a | wk16 | FLRT2 | 23768 | 3761 | 0.62 | 0.41 | 0.12 | 6.7845980676725E-92 | 2.2860024729216E-87 |
| 74 | 4 | ICa | Interstitial cells a | wk16 | C12orf57 | 113246 | 29521 | 0.62 | 0.79 | 0.55 | 4.1687719049016E-76 | 1.4046260056376E-71 |
| 74 | 4 | ICa | Interstitial cells a | wk16 | LRRC17 | 10234 | 16895 | 0.61 | 0.41 | 0.1 | 1.0771663565163E-110 | 3.6294043216459E-106 |
| 74 | 4 | ICa | Interstitial cells a | wk16 | RARRES2 | 5919 | 9868 | 0.61 | 0.42 | 0.17 | 4.6791028477867E-60 | 1.5765769135333E-55 |
| 74 | 4 | ICa | Interstitial cells a | wk16 | SNAI2 | 6591 | 11094 | 0.61 | 0.39 | 0.12 | 5.6988983509531E-74 | 1.9201868103701E-69 |
| 74 | 4 | ICa | Interstitial cells a | wk16 | CPE | 1363 | 2303 | 0.61 | 0.49 | 0.21 | 3.9561088249874E-64 | 1.3329713074912E-59 |
| 74 | 4 | ICa | Interstitial cells a | wk16 | CDC42EP5 | 148170 | 17408 | 0.59 | 0.37 | 0.08 | 2.5819160338328E-105 | 8.6995078843964E-101 |
| 74 | 4 | ICa | Interstitial cells a | wk16 | PDGFRB | 5159 | 8804 | 0.59 | 0.3 | 0.07 | 8.159113348033E-76 | 2.7491316514862E-71 |
| 74 | 4 | ICa | Interstitial cells a | wk16 | DCN | 1634 | 2705 | 0.59 | 0.46 | 0.18 | 2.189919373368E-62 | 7.3787143366263E-58 |
| 74 | 4 | ICa | Interstitial cells a | wk16 | KLF2 | 10365 | 6347 | 0.58 | 0.4 | 0.15 | 5.2781619861685E-63 | 1.7784238996196E-58 |
| 74 | 4 | ICa | Interstitial cells a | wk16 | SLC2A3 | 6515 | 11007 | 0.58 | 0.42 | 0.14 | 2.6315275792468E-77 | 8.8666690255142E-73 |
| 74 | 4 | ICa | Interstitial cells a | wk16 | GNAS | 2778 | 4392 | 0.58 | 0.75 | 0.65 | 9.3659848894087E-29 | 3.1557749486374E-24 |
| 74 | 4 | ICa | Interstitial cells a | wk16 | MAGED2 | 10916 | 16353 | 0.58 | 0.92 | 0.73 | 6.4700893605776E-93 | 2.180031909153E-88 |
| 74 | 4 | ICa | Interstitial cells a | wk16 | TGFB1I1 | 7041 | 11767 | 0.58 | 0.38 | 0.11 | 1.8692381443286E-84 | 6.2982110035008E-80 |
| 74 | 4 | ICa | Interstitial cells a | wk16 | CAVIN1 | 284119 | 9688 | 0.58 | 0.38 | 0.12 | 4.7066069378721E-75 | 1.5858441416466E-70 |
| 74 | 4 | ICa | Interstitial cells a | wk16 | HOPX | 84525 | 24961 | 0.58 | 0.27 | 0.05 | 7.2471122536904E-93 | 2.4418420027584E-88 |
| 74 | 4 | ICa | Interstitial cells a | wk16 | AGTR2 | 186 | 338 | 0.57 | 0.33 | 0.07 | 1.8190478195506E-91 | 6.1290997231937E-87 |
| 74 | 4 | ICa | Interstitial cells a | wk16 | FOS | 2353 | 3796 | 0.57 | 0.92 | 0.77 | 1.7990824244022E-58 | 6.0618283207806E-54 |
| 74 | 4 | ICa | Interstitial cells a | wk16 | COL5A2 | 1290 | 2210 | 0.57 | 0.39 | 0.1 | 1.2348700022095E-90 | 4.1607709854447E-86 |
| 74 | 4 | ICa | Interstitial cells a | wk16 | DKK1 | 22943 | 2891 | 0.57 | 0.13 | 0.03 | 3.2468568984877E-31 | 1.0939959633765E-26 |
| 74 | 4 | ICa | Interstitial cells a | wk16 | GUCY1A1 | 2982 | 4685 | 0.57 | 0.41 | 0.12 | 3.2834478706938E-79 | 1.1063249255516E-74 |
| 74 | 4 | ICa | Interstitial cells a | wk16 | FGF7 | 2252 | 3685 | 0.56 | 0.28 | 0.06 | 1.638031728892E-87 | 5.5191841073288E-83 |
| 74 | 4 | ICa | Interstitial cells a | wk16 | ALX1 | 8092 | 1494 | 0.56 | 0.37 | 0.09 | 8.5590229995376E-91 | 2.8838772094642E-86 |
| 74 | 4 | ICa | Interstitial cells a | wk16 | ID2 | 3398 | 5361 | 0.55 | 0.85 | 0.72 | 1.1502659467887E-44 | 3.8757060811098E-40 |
| 74 | 4 | ICa | Interstitial cells a | wk16 | ZEB2 | 9839 | 14881 | 0.55 | 0.51 | 0.19 | 2.6666583419711E-77 | 8.9850386174374E-73 |
| 74 | 4 | ICa | Interstitial cells a | wk16 | NR2F2-AS1 | 644192 | 44222 | 0.54 | 0.47 | 0.19 | 1.741630379424E-65 | 5.8682494004312E-61 |
| 74 | 4 | ICa | Interstitial cells a | wk16 | EFEMP2 | 30008 | 3219 | 0.54 | 0.52 | 0.28 | 5.2900651221128E-50 | 1.7824345422447E-45 |
| 74 | 4 | ICa | Interstitial cells a | wk16 | CRABP1 | 1381 | 2338 | 0.53 | 0.29 | 0.1 | 1.21928817767E-47 | 4.1082695858413E-43 |
| 74 | 4 | ICa | Interstitial cells a | wk16 | FN1 | 2335 | 3778 | 0.53 | 0.42 | 0.13 | 8.0502390413241E-75 | 2.7124475425837E-70 |
| 74 | 4 | ICa | Interstitial cells a | wk16 | KCNE4 | 23704 | 6244 | 0.53 | 0.21 | 0.03 | 2.1331086494256E-76 | 7.1872962833746E-72 |
| 74 | 4 | ICa | Interstitial cells a | wk16 | TPBG | 7162 | 12004 | 0.53 | 0.3 | 0.13 | 2.9354067531883E-40 | 9.8905595141926E-36 |
| 74 | 4 | ICa | Interstitial cells a | wk16 | ZFP36 | 7538 | 12862 | 0.53 | 0.42 | 0.25 | 4.507848059699E-27 | 1.518874325235E-22 |
| 74 | 4 | ICa | Interstitial cells a | wk16 | TPM4 | 7171 | 12013 | 0.53 | 0.64 | 0.4 | 1.4439542835176E-51 | 4.865259562884E-47 |
| 74 | 4 | ICa | Interstitial cells a | wk16 | CHODL | 140578 | 17807 | 0.53 | 0.22 | 0.06 | 1.8972953415046E-47 | 6.3927469236657E-43 |
| 74 | 4 | ICa | Interstitial cells a | wk16 | SH3BGRL | 6451 | 10823 | 0.52 | 0.72 | 0.49 | 2.043633623779E-56 | 6.8858191319611E-52 |
| 74 | 4 | ICa | Interstitial cells a | wk16 | NFIA | 4774 | 7784 | 0.52 | 0.32 | 0.1 | 5.6239053585121E-64 | 1.8949186714971E-59 |
| 74 | 4 | ICa | Interstitial cells a | wk16 | HIC1 | 3090 | 4909 | 0.52 | 0.29 | 0.05 | 3.3718173606386E-94 | 1.1361001414936E-89 |
| 74 | 4 | ICa | Interstitial cells a | wk16 | MYH10 | 4628 | 7568 | 0.51 | 0.56 | 0.35 | 1.3803047979847E-41 | 4.6507989863297E-37 |
| 74 | 4 | ICa | Interstitial cells a | wk16 | TCF21 | 6943 | 11632 | 0.51 | 0.7 | 0.36 | 1.7319263721234E-61 | 5.8355527182327E-57 |
| 74 | 4 | ICa | Interstitial cells a | wk16 | PELO | 53918 | 8829 | 0.5 | 0.38 | 0.17 | 2.6704207662112E-46 | 8.997715729672E-42 |
| 74 | 4 | ICa | Interstitial cells a | wk16 | SFRP1 | 6422 | 10776 | 0.49 | 0.44 | 0.23 | 3.370563186749E-37 | 1.1356775601432E-32 |
| 74 | 4 | ICa | Interstitial cells a | wk16 | FSTL1 | 11167 | 3972 | 0.49 | 0.53 | 0.29 | 9.8180390148082E-49 | 3.3080900656495E-44 |
| 74 | 4 | ICa | Interstitial cells a | wk16 | C7 | 730 | 1346 | 0.49 | 0.25 | 0.05 | 8.7102400364651E-73 | 2.9348282778865E-68 |
| 74 | 4 | ICa | Interstitial cells a | wk16 | PBX1 | 5087 | 8632 | 0.48 | 0.6 | 0.37 | 6.3531021156746E-43 | 2.1406142268554E-38 |
| 74 | 4 | ICa | Interstitial cells a | wk16 | OGN | 4969 | 8126 | 0.48 | 0.27 | 0.07 | 3.0783678346778E-61 | 1.0372252582163E-56 |
| 74 | 4 | ICa | Interstitial cells a | wk16 | PCDH18 | 54510 | 14268 | 0.48 | 0.39 | 0.13 | 5.2692343217161E-64 | 1.775415812359E-59 |
| 74 | 4 | ICa | Interstitial cells a | wk16 | STAT3 | 6774 | 11364 | 0.47 | 0.7 | 0.49 | 1.4394692417007E-43 | 4.8501476629864E-39 |
| 74 | 4 | ICa | Interstitial cells a | wk16 | BASP1 | 10409 | 957 | 0.47 | 0.64 | 0.45 | 9.5310060988373E-37 | 3.2113771949422E-32 |
| 74 | 4 | ICa | Interstitial cells a | wk16 | APCDD1 | 147495 | 15718 | 0.47 | 0.22 | 0.06 | 4.3000368833468E-46 | 1.4488544274749E-41 |
| 74 | 4 | ICa | Interstitial cells a | wk16 | MYLK | 4638 | 7590 | 0.47 | 0.36 | 0.13 | 5.5949400224562E-55 | 1.8851590911664E-50 |
| 74 | 4 | ICa | Interstitial cells a | wk16 | IGFBP5 | 3488 | 5474 | 0.47 | 0.51 | 0.2 | 1.3344947526308E-61 | 4.4964466195141E-57 |