Marker Genes
Dataset: Single-cell transcriptomics reveals gene expression dynamics of human fetal kidney development
- tissue: Kidney
- ontology: Kidney
- genotype: -
- stage: Fetal
- treatment condition: WT
- cell/nucleus: Cells
- pmid: 30789893
- subset name: wk16
- total genes: Not reported
- clustering: scran
- pseudotime: Monocle 2
- link: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE114530
Rows:100
dataset id | cluster id | cluster name | cell type name | sample id | gene symbol | entrez geneid | species specific geneid |
avg log fc (?)
|
pct 1 | pct 2 | p value | padj |
---|---|---|---|---|---|---|---|---|---|---|---|---|
74 | 4 | ICa | Interstitial cells a | wk16 | TAGLN | 6876 | 11553 | 1.31 | 0.6 | 0.12 | 4.89851925149074e-225 | 1.65050707659729e-220 |
74 | 4 | ICa | Interstitial cells a | wk16 | LGALS1 | 3956 | 6561 | 1.3 | 0.97 | 0.35 | 9.11194709798231e-276 | 3.07017945519416e-271 |
74 | 4 | ICa | Interstitial cells a | wk16 | TPM2 | 7169 | 12011 | 1.25 | 0.8 | 0.23 | 1.32041590518971e-252 | 4.4490093509462e-248 |
74 | 4 | ICa | Interstitial cells a | wk16 | ACTA2 | 59 | 130 | 1.15 | 0.39 | 0.08 | 6.99393187768149e-132 | 2.356535406866e-127 |
74 | 4 | ICa | Interstitial cells a | wk16 | CYP1B1 | 1545 | 2597 | 1.13 | 0.68 | 0.14 | 2.24011882689122e-244 | 7.54785637532729e-240 |
74 | 4 | ICa | Interstitial cells a | wk16 | PCOLCE | 5118 | 8738 | 1.1 | 0.78 | 0.16 | 3.28806203630183e-284 | 1.10787962251154e-279 |
74 | 4 | ICa | Interstitial cells a | wk16 | COL1A1 | 1277 | 2197 | 1.09 | 0.83 | 0.21 | 1.29855638603397e-248 | 4.37535588710285e-244 |
74 | 4 | ICa | Interstitial cells a | wk16 | COL1A2 | 1278 | 2198 | 1.08 | 0.82 | 0.19 | 5.1325134947663e-273 | 1.72934909692656e-268 |
74 | 4 | ICa | Interstitial cells a | wk16 | COL3A1 | 1281 | 2201 | 1.01 | 0.79 | 0.21 | 9.78681149662249e-222 | 3.29756826567198e-217 |
74 | 4 | ICa | Interstitial cells a | wk16 | MFAP4 | 4239 | 7035 | 0.98 | 0.72 | 0.18 | 1.421467652397e-213 | 4.78949310798645e-209 |
74 | 4 | ICa | Interstitial cells a | wk16 | PTN | 5764 | 9630 | 0.95 | 0.77 | 0.39 | 1.01742519705489e-119 | 3.42811245895676e-115 |
74 | 4 | ICa | Interstitial cells a | wk16 | PLAC9 | 219348 | 19255 | 0.94 | 0.59 | 0.11 | 1.80156579846403e-214 | 6.07019580134471e-210 |
74 | 4 | ICa | Interstitial cells a | wk16 | OLFML3 | 56944 | 24956 | 0.94 | 0.66 | 0.14 | 8.22093026035393e-220 | 2.76996024192365e-215 |
74 | 4 | ICa | Interstitial cells a | wk16 | CALD1 | 800 | 1441 | 0.93 | 0.92 | 0.56 | 4.35089926242866e-163 | 1.46599199748271e-158 |
74 | 4 | ICa | Interstitial cells a | wk16 | CTSC | 1075 | 2528 | 0.88 | 0.76 | 0.28 | 5.71531564215985e-159 | 1.92571845246934e-154 |
74 | 4 | ICa | Interstitial cells a | wk16 | POSTN | 10631 | 16953 | 0.87 | 0.29 | 0.03 | 2.19323335190715e-151 | 7.38988045591594e-147 |
74 | 4 | ICa | Interstitial cells a | wk16 | EMCN | 51705 | 16041 | 0.85 | 0.53 | 0.12 | 1.73598570007005e-160 | 5.84923021781603e-156 |
74 | 4 | ICa | Interstitial cells a | wk16 | SULT1E1 | 6783 | 11377 | 0.84 | 0.66 | 0.2 | 1.3637149767961e-140 | 4.5949012428168e-136 |
74 | 4 | ICa | Interstitial cells a | wk16 | FST | 10468 | 3971 | 0.83 | 0.35 | 0.09 | 4.95717332477191e-94 | 1.67026998004865e-89 |
74 | 4 | ICa | Interstitial cells a | wk16 | EMILIN1 | 11117 | 19880 | 0.82 | 0.54 | 0.11 | 9.76956626410012e-181 | 3.29175765702589e-176 |
74 | 4 | ICa | Interstitial cells a | wk16 | MMP2 | 4313 | 7166 | 0.81 | 0.55 | 0.13 | 2.70134377790956e-153 | 9.10190772528847e-149 |
74 | 4 | ICa | Interstitial cells a | wk16 | CXCL12 | 6387 | 10672 | 0.79 | 0.52 | 0.22 | 2.62808619465334e-71 | 8.85507362426498e-67 |
74 | 4 | ICa | Interstitial cells a | wk16 | ITM2A | 9452 | 6173 | 0.79 | 0.4 | 0.11 | 7.02905018806038e-95 | 2.36836817036507e-90 |
74 | 4 | ICa | Interstitial cells a | wk16 | CLDN11 | 5010 | 8514 | 0.79 | 0.48 | 0.13 | 9.8482969268022e-110 | 3.31828516651673e-105 |
74 | 4 | ICa | Interstitial cells a | wk16 | COL6A3 | 1293 | 2213 | 0.78 | 0.58 | 0.16 | 9.83709636127302e-142 | 3.31451124796733e-137 |
74 | 4 | ICa | Interstitial cells a | wk16 | IGF2 | 3481 | 5466 | 0.78 | 0.91 | 0.59 | 3.29878254052892e-127 | 1.11149178920581e-122 |
74 | 4 | ICa | Interstitial cells a | wk16 | TNC | 3371 | 5318 | 0.76 | 0.51 | 0.12 | 6.38300018717039e-142 | 2.15068808306519e-137 |
74 | 4 | ICa | Interstitial cells a | wk16 | MEG3 | 55384 | 14575 | 0.75 | 0.66 | 0.28 | 1.11627337494609e-95 | 3.76117150954336e-91 |
74 | 4 | ICa | Interstitial cells a | wk16 | C11orf96 | 387763 | 38675 | 0.72 | 0.38 | 0.11 | 2.91051730949888e-88 | 9.80669702262552e-84 |
74 | 4 | ICa | Interstitial cells a | wk16 | TGFBI | 7045 | 11771 | 0.71 | 0.47 | 0.11 | 4.57270372837554e-128 | 1.54072679423885e-123 |
74 | 4 | ICa | Interstitial cells a | wk16 | COL6A2 | 1292 | 2212 | 0.71 | 0.56 | 0.2 | 6.6556877379897e-106 | 2.24256742643825e-101 |
74 | 4 | ICa | Interstitial cells a | wk16 | MOXD1 | 26002 | 21063 | 0.7 | 0.53 | 0.15 | 4.1673443256864e-118 | 1.40414499709678e-113 |
74 | 4 | ICa | Interstitial cells a | wk16 | MDFI | 4188 | 6967 | 0.7 | 0.46 | 0.1 | 3.03987141500151e-135 | 1.02425427457061e-130 |
74 | 4 | ICa | Interstitial cells a | wk16 | FBLN5 | 10516 | 3602 | 0.7 | 0.44 | 0.1 | 7.57424287409465e-122 | 2.55206539399745e-117 |
74 | 4 | ICa | Interstitial cells a | wk16 | JUNB | 3726 | 6205 | 0.69 | 0.78 | 0.58 | 8.65136409212802e-56 | 2.91499061720161e-51 |
74 | 4 | ICa | Interstitial cells a | wk16 | CCN1 | 3491 | 2654 | 0.67 | 0.78 | 0.54 | 4.05045340714524e-62 | 1.36475977100352e-57 |
74 | 4 | ICa | Interstitial cells a | wk16 | MGP | 4256 | 7060 | 0.67 | 0.16 | 0.02 | 1.04364894311141e-60 | 3.51647074891959e-56 |
74 | 4 | ICa | Interstitial cells a | wk16 | PRSS23 | 11098 | 14370 | 0.66 | 0.56 | 0.2 | 1.19346805837027e-96 | 4.02127127587278e-92 |
74 | 4 | ICa | Interstitial cells a | wk16 | GPC3 | 2719 | 4451 | 0.66 | 0.94 | 0.75 | 6.30018710351299e-94 | 2.12278504265767e-89 |
74 | 4 | ICa | Interstitial cells a | wk16 | PDGFRA | 5156 | 8803 | 0.65 | 0.47 | 0.1 | 5.88981169787833e-138 | 1.98451315348312e-133 |
74 | 4 | ICa | Interstitial cells a | wk16 | EDNRA | 1909 | 3179 | 0.65 | 0.39 | 0.09 | 7.72298398570447e-112 | 2.60218222414326e-107 |
74 | 4 | ICa | Interstitial cells a | wk16 | BGN | 633 | 1044 | 0.64 | 0.42 | 0.11 | 3.04997132362695e-101 | 1.02765733778287e-96 |
74 | 4 | ICa | Interstitial cells a | wk16 | TMSB4X | 7114 | 11881 | 0.63 | 1 | 0.99 | 1.017493518481e-136 | 3.42834266116988e-132 |
74 | 4 | ICa | Interstitial cells a | wk16 | COL21A1 | 81578 | 17025 | 0.63 | 0.43 | 0.09 | 8.86476843557988e-125 | 2.98689507668429e-120 |
74 | 4 | ICa | Interstitial cells a | wk16 | SERPINH1 | 871 | 1546 | 0.63 | 0.82 | 0.54 | 4.99012691585892e-84 | 1.6813733630295e-79 |
74 | 4 | ICa | Interstitial cells a | wk16 | VIM | 7431 | 12692 | 0.63 | 0.97 | 0.84 | 2.24074363085203e-92 | 7.54996158979283e-88 |
74 | 4 | ICa | Interstitial cells a | wk16 | LDB2 | 9079 | 6533 | 0.63 | 0.4 | 0.1 | 2.02359777667581e-104 | 6.81831034873148e-100 |
74 | 4 | ICa | Interstitial cells a | wk16 | MEIS2 | 4212 | 7001 | 0.63 | 0.72 | 0.39 | 5.89854108874148e-73 | 1.98745443444055e-68 |
74 | 4 | ICa | Interstitial cells a | wk16 | CNN2 | 1265 | 2156 | 0.63 | 0.54 | 0.26 | 1.04293611415451e-64 | 3.51406894303219e-60 |
74 | 4 | ICa | Interstitial cells a | wk16 | FLRT2 | 23768 | 3761 | 0.62 | 0.41 | 0.12 | 6.7845980676725e-92 | 2.28600247292157e-87 |
74 | 4 | ICa | Interstitial cells a | wk16 | C12orf57 | 113246 | 29521 | 0.62 | 0.79 | 0.55 | 4.16877190490164e-76 | 1.40462600563756e-71 |
74 | 4 | ICa | Interstitial cells a | wk16 | LRRC17 | 10234 | 16895 | 0.61 | 0.41 | 0.1 | 1.07716635651626e-110 | 3.6294043216459e-106 |
74 | 4 | ICa | Interstitial cells a | wk16 | RARRES2 | 5919 | 9868 | 0.61 | 0.42 | 0.17 | 4.67910284778671e-60 | 1.57657691353325e-55 |
74 | 4 | ICa | Interstitial cells a | wk16 | SNAI2 | 6591 | 11094 | 0.61 | 0.39 | 0.12 | 5.69889835095311e-74 | 1.92018681037014e-69 |
74 | 4 | ICa | Interstitial cells a | wk16 | CPE | 1363 | 2303 | 0.61 | 0.49 | 0.21 | 3.95610882498735e-64 | 1.33297130749124e-59 |
74 | 4 | ICa | Interstitial cells a | wk16 | CDC42EP5 | 148170 | 17408 | 0.59 | 0.37 | 0.08 | 2.58191603383284e-105 | 8.69950788439636e-101 |
74 | 4 | ICa | Interstitial cells a | wk16 | PDGFRB | 5159 | 8804 | 0.59 | 0.3 | 0.07 | 8.15911334803304e-76 | 2.74913165148625e-71 |
74 | 4 | ICa | Interstitial cells a | wk16 | DCN | 1634 | 2705 | 0.59 | 0.46 | 0.18 | 2.18991937336805e-62 | 7.37871433662629e-58 |
74 | 4 | ICa | Interstitial cells a | wk16 | KLF2 | 10365 | 6347 | 0.58 | 0.4 | 0.15 | 5.27816198616847e-63 | 1.77842389961961e-58 |
74 | 4 | ICa | Interstitial cells a | wk16 | SLC2A3 | 6515 | 11007 | 0.58 | 0.42 | 0.14 | 2.6315275792468e-77 | 8.86666902551416e-73 |
74 | 4 | ICa | Interstitial cells a | wk16 | GNAS | 2778 | 4392 | 0.58 | 0.75 | 0.65 | 9.36598488940871e-29 | 3.15577494863737e-24 |
74 | 4 | ICa | Interstitial cells a | wk16 | MAGED2 | 10916 | 16353 | 0.58 | 0.92 | 0.73 | 6.47008936057762e-93 | 2.18003190915302e-88 |
74 | 4 | ICa | Interstitial cells a | wk16 | TGFB1I1 | 7041 | 11767 | 0.58 | 0.38 | 0.11 | 1.86923814432862e-84 | 6.29821100350084e-80 |
74 | 4 | ICa | Interstitial cells a | wk16 | CAVIN1 | 284119 | 9688 | 0.58 | 0.38 | 0.12 | 4.70660693787212e-75 | 1.58584414164663e-70 |
74 | 4 | ICa | Interstitial cells a | wk16 | HOPX | 84525 | 24961 | 0.58 | 0.27 | 0.05 | 7.2471122536904e-93 | 2.44184200275844e-88 |
74 | 4 | ICa | Interstitial cells a | wk16 | AGTR2 | 186 | 338 | 0.57 | 0.33 | 0.07 | 1.81904781955057e-91 | 6.12909972319369e-87 |
74 | 4 | ICa | Interstitial cells a | wk16 | FOS | 2353 | 3796 | 0.57 | 0.92 | 0.77 | 1.79908242440216e-58 | 6.06182832078063e-54 |
74 | 4 | ICa | Interstitial cells a | wk16 | COL5A2 | 1290 | 2210 | 0.57 | 0.39 | 0.1 | 1.23487000220951e-90 | 4.16077098544472e-86 |
74 | 4 | ICa | Interstitial cells a | wk16 | DKK1 | 22943 | 2891 | 0.57 | 0.13 | 0.03 | 3.24685689848771e-31 | 1.09399596337645e-26 |
74 | 4 | ICa | Interstitial cells a | wk16 | GUCY1A1 | 2982 | 4685 | 0.57 | 0.41 | 0.12 | 3.28344787069381e-79 | 1.10632492555157e-74 |
74 | 4 | ICa | Interstitial cells a | wk16 | FGF7 | 2252 | 3685 | 0.56 | 0.28 | 0.06 | 1.63803172889203e-87 | 5.51918410732881e-83 |
74 | 4 | ICa | Interstitial cells a | wk16 | ALX1 | 8092 | 1494 | 0.56 | 0.37 | 0.09 | 8.55902299953764e-91 | 2.88387720946421e-86 |
74 | 4 | ICa | Interstitial cells a | wk16 | ID2 | 3398 | 5361 | 0.55 | 0.85 | 0.72 | 1.15026594678867e-44 | 3.87570608110975e-40 |
74 | 4 | ICa | Interstitial cells a | wk16 | ZEB2 | 9839 | 14881 | 0.55 | 0.51 | 0.19 | 2.66665834197109e-77 | 8.98503861743738e-73 |
74 | 4 | ICa | Interstitial cells a | wk16 | NR2F2-AS1 | 644192 | 44222 | 0.54 | 0.47 | 0.19 | 1.741630379424e-65 | 5.86824940043122e-61 |
74 | 4 | ICa | Interstitial cells a | wk16 | EFEMP2 | 30008 | 3219 | 0.54 | 0.52 | 0.28 | 5.29006512211282e-50 | 1.78243454224469e-45 |
74 | 4 | ICa | Interstitial cells a | wk16 | CRABP1 | 1381 | 2338 | 0.53 | 0.29 | 0.1 | 1.21928817767e-47 | 4.10826958584131e-43 |
74 | 4 | ICa | Interstitial cells a | wk16 | FN1 | 2335 | 3778 | 0.53 | 0.42 | 0.13 | 8.05023904132407e-75 | 2.71244754258373e-70 |
74 | 4 | ICa | Interstitial cells a | wk16 | KCNE4 | 23704 | 6244 | 0.53 | 0.21 | 0.03 | 2.13310864942559e-76 | 7.18729628337457e-72 |
74 | 4 | ICa | Interstitial cells a | wk16 | TPBG | 7162 | 12004 | 0.53 | 0.3 | 0.13 | 2.93540675318828e-40 | 9.8905595141926e-36 |
74 | 4 | ICa | Interstitial cells a | wk16 | ZFP36 | 7538 | 12862 | 0.53 | 0.42 | 0.25 | 4.50784805969901e-27 | 1.51887432523498e-22 |
74 | 4 | ICa | Interstitial cells a | wk16 | TPM4 | 7171 | 12013 | 0.53 | 0.64 | 0.4 | 1.44395428351755e-51 | 4.86525956288404e-47 |
74 | 4 | ICa | Interstitial cells a | wk16 | CHODL | 140578 | 17807 | 0.53 | 0.22 | 0.06 | 1.89729534150462e-47 | 6.39274692366566e-43 |
74 | 4 | ICa | Interstitial cells a | wk16 | SH3BGRL | 6451 | 10823 | 0.52 | 0.72 | 0.49 | 2.04363362377903e-56 | 6.88581913196105e-52 |
74 | 4 | ICa | Interstitial cells a | wk16 | NFIA | 4774 | 7784 | 0.52 | 0.32 | 0.1 | 5.62390535851207e-64 | 1.89491867149706e-59 |
74 | 4 | ICa | Interstitial cells a | wk16 | HIC1 | 3090 | 4909 | 0.52 | 0.29 | 0.05 | 3.37181736063857e-94 | 1.13610014149356e-89 |
74 | 4 | ICa | Interstitial cells a | wk16 | MYH10 | 4628 | 7568 | 0.51 | 0.56 | 0.35 | 1.3803047979847e-41 | 4.65079898632966e-37 |
74 | 4 | ICa | Interstitial cells a | wk16 | TCF21 | 6943 | 11632 | 0.51 | 0.7 | 0.36 | 1.73192637212344e-61 | 5.83555271823271e-57 |
74 | 4 | ICa | Interstitial cells a | wk16 | PELO | 53918 | 8829 | 0.5 | 0.38 | 0.17 | 2.67042076621118e-46 | 8.99771572967196e-42 |
74 | 4 | ICa | Interstitial cells a | wk16 | SFRP1 | 6422 | 10776 | 0.49 | 0.44 | 0.23 | 3.37056318674897e-37 | 1.1356775601432e-32 |
74 | 4 | ICa | Interstitial cells a | wk16 | FSTL1 | 11167 | 3972 | 0.49 | 0.53 | 0.29 | 9.81803901480816e-49 | 3.30809006564946e-44 |
74 | 4 | ICa | Interstitial cells a | wk16 | C7 | 730 | 1346 | 0.49 | 0.25 | 0.05 | 8.7102400364651e-73 | 2.93482827788655e-68 |
74 | 4 | ICa | Interstitial cells a | wk16 | PBX1 | 5087 | 8632 | 0.48 | 0.6 | 0.37 | 6.35310211567462e-43 | 2.14061422685541e-38 |
74 | 4 | ICa | Interstitial cells a | wk16 | OGN | 4969 | 8126 | 0.48 | 0.27 | 0.07 | 3.07836783467783e-61 | 1.03722525821635e-56 |
74 | 4 | ICa | Interstitial cells a | wk16 | PCDH18 | 54510 | 14268 | 0.48 | 0.39 | 0.13 | 5.26923432171615e-64 | 1.77541581235904e-59 |
74 | 4 | ICa | Interstitial cells a | wk16 | STAT3 | 6774 | 11364 | 0.47 | 0.7 | 0.49 | 1.43946924170073e-43 | 4.85014766298643e-39 |
74 | 4 | ICa | Interstitial cells a | wk16 | BASP1 | 10409 | 957 | 0.47 | 0.64 | 0.45 | 9.5310060988373e-37 | 3.21137719494224e-32 |
74 | 4 | ICa | Interstitial cells a | wk16 | APCDD1 | 147495 | 15718 | 0.47 | 0.22 | 0.06 | 4.30003688334681e-46 | 1.44885442747487e-41 |
74 | 4 | ICa | Interstitial cells a | wk16 | MYLK | 4638 | 7590 | 0.47 | 0.36 | 0.13 | 5.59494002245622e-55 | 1.8851590911664e-50 |
74 | 4 | ICa | Interstitial cells a | wk16 | IGFBP5 | 3488 | 5474 | 0.47 | 0.51 | 0.2 | 1.33449475263076e-61 | 4.4964466195141e-57 |