Marker Genes
Dataset: Single-cell transcriptomics reveals gene expression dynamics of human fetal kidney development
- tissue: Kidney
- ontology: Kidney
- genotype: -
- stage: Fetal
- treatment condition: WT
- cell/nucleus: Cells
- pmid: 30789893
- subset name: wk16
- total genes: Not reported
- clustering: scran
- pseudotime: Monocle 2
- link: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE114530
Rows:100
| dataset id | cluster id | cluster name | cell type name | sample id | gene symbol | entrez geneid | species specific geneid |
avg log fc (?)
|
pct 1 | pct 2 | p value | padj |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 74 | 3 | ErPrT | Early proximal tubule | wk16 | APOE | 348 | 613 | 2.68 | 0.98 | 0.18 | 0 | 0 |
| 74 | 3 | ErPrT | Early proximal tubule | wk16 | APOA1 | 335 | 600 | 2.38 | 0.52 | 0.03 | 2.7130631744549E-305 | 9.1413950600083E-301 |
| 74 | 3 | ErPrT | Early proximal tubule | wk16 | APOM | 55937 | 13916 | 2.32 | 0.91 | 0.06 | 0 | 0 |
| 74 | 3 | ErPrT | Early proximal tubule | wk16 | SMIM24 | 284422 | 37244 | 2.16 | 0.96 | 0.07 | 0 | 0 |
| 74 | 3 | ErPrT | Early proximal tubule | wk16 | GPX3 | 2878 | 4555 | 2.11 | 0.85 | 0.09 | 0 | 0 |
| 74 | 3 | ErPrT | Early proximal tubule | wk16 | SPP1 | 6696 | 11255 | 2.05 | 0.69 | 0.06 | 0 | 0 |
| 74 | 3 | ErPrT | Early proximal tubule | wk16 | FTL | 2512 | 3999 | 2.02 | 1 | 0.97 | 9.595063203829E-202 | 3.2329605958981E-197 |
| 74 | 3 | ErPrT | Early proximal tubule | wk16 | LINC01781 | 101927412 | 52571 | 1.99 | 0.86 | 0.05 | 0 | 0 |
| 74 | 3 | ErPrT | Early proximal tubule | wk16 | DAB2 | 1601 | 2662 | 1.66 | 0.94 | 0.15 | 0 | 0 |
| 74 | 3 | ErPrT | Early proximal tubule | wk16 | CUBN | 8029 | 2548 | 1.61 | 0.8 | 0.01 | 0 | 0 |
| 74 | 3 | ErPrT | Early proximal tubule | wk16 | MPC2 | 25874 | 24515 | 1.6 | 0.98 | 0.41 | 9.4441872655363E-209 | 3.1821244572498E-204 |
| 74 | 3 | ErPrT | Early proximal tubule | wk16 | GLYATL1 | 92292 | 30519 | 1.55 | 0.68 | 0.02 | 0 | 0 |
| 74 | 3 | ErPrT | Early proximal tubule | wk16 | AMN | 81693 | 14604 | 1.49 | 0.81 | 0.02 | 0 | 0 |
| 74 | 3 | ErPrT | Early proximal tubule | wk16 | RIDA | 10247 | 16897 | 1.4 | 0.89 | 0.18 | 1.433177952928E-263 | 4.8289497945955E-259 |
| 74 | 3 | ErPrT | Early proximal tubule | wk16 | LGALS2 | 3957 | 6562 | 1.29 | 0.74 | 0.04 | 0 | 0 |
| 74 | 3 | ErPrT | Early proximal tubule | wk16 | MSRB1 | 51734 | 14133 | 1.27 | 0.76 | 0.16 | 2.2115988288332E-198 | 7.4517610938705E-194 |
| 74 | 3 | ErPrT | Early proximal tubule | wk16 | BHMT | 635 | 1047 | 1.24 | 0.55 | 0.02 | 0 | 0 |
| 74 | 3 | ErPrT | Early proximal tubule | wk16 | GCHFR | 2644 | 4194 | 1.24 | 0.77 | 0.15 | 9.6973804287731E-211 | 3.2674353616708E-206 |
| 74 | 3 | ErPrT | Early proximal tubule | wk16 | ATP6V1F | 9296 | 16832 | 1.2 | 0.97 | 0.5 | 2.7173403942998E-160 | 9.1558067245536E-156 |
| 74 | 3 | ErPrT | Early proximal tubule | wk16 | GATM | 2628 | 4175 | 1.17 | 0.58 | 0.04 | 0 | 0 |
| 74 | 3 | ErPrT | Early proximal tubule | wk16 | SERPINF1 | 5176 | 8824 | 1.15 | 0.68 | 0.07 | 4.2744803797732E-285 | 1.4402434191608E-280 |
| 74 | 3 | ErPrT | Early proximal tubule | wk16 | GLYAT | 10249 | 13734 | 1.15 | 0.61 | 0.008 | 0 | 0 |
| 74 | 3 | ErPrT | Early proximal tubule | wk16 | PDZK1 | 5174 | 8821 | 1.14 | 0.64 | 0.05 | 0 | 0 |
| 74 | 3 | ErPrT | Early proximal tubule | wk16 | ACAA2 | 10449 | 83 | 1.14 | 0.86 | 0.29 | 1.2484085677136E-155 | 4.2063878280541E-151 |
| 74 | 3 | ErPrT | Early proximal tubule | wk16 | ETFB | 2109 | 3482 | 1.14 | 0.91 | 0.37 | 3.0643983271195E-148 | 1.0325183723396E-143 |
| 74 | 3 | ErPrT | Early proximal tubule | wk16 | CHCHD10 | 400916 | 15559 | 1.12 | 0.84 | 0.25 | 3.9915126451064E-153 | 1.3449002706421E-148 |
| 74 | 3 | ErPrT | Early proximal tubule | wk16 | LRP2 | 4036 | 6694 | 1.12 | 0.6 | 0.03 | 0 | 0 |
| 74 | 3 | ErPrT | Early proximal tubule | wk16 | SLC3A1 | 6519 | 11025 | 1.11 | 0.63 | 0.03 | 0 | 0 |
| 74 | 3 | ErPrT | Early proximal tubule | wk16 | PPP1R16A | 84988 | 14941 | 1.1 | 0.8 | 0.24 | 6.645456924353E-143 | 2.2391202560915E-138 |
| 74 | 3 | ErPrT | Early proximal tubule | wk16 | ALDH6A1 | 4329 | 7179 | 1.09 | 0.74 | 0.16 | 4.5797660273638E-181 | 1.5431063652599E-176 |
| 74 | 3 | ErPrT | Early proximal tubule | wk16 | DNPH1 | 10591 | 21218 | 1.09 | 0.91 | 0.37 | 2.6105587309284E-149 | 8.7960165879902E-145 |
| 74 | 3 | ErPrT | Early proximal tubule | wk16 | HAO2 | 51179 | 4810 | 1.08 | 0.55 | 0.004 | 0 | 0 |
| 74 | 3 | ErPrT | Early proximal tubule | wk16 | ANXA4 | 307 | 542 | 1.06 | 0.75 | 0.2 | 1.0404170805568E-144 | 3.5055813112281E-140 |
| 74 | 3 | ErPrT | Early proximal tubule | wk16 | PSMA2 | 5683 | 9531 | 1.05 | 0.86 | 0.58 | 1.4448296891132E-59 | 4.868209154498E-55 |
| 74 | 3 | ErPrT | Early proximal tubule | wk16 | DBI | 1622 | 2690 | 1.05 | 0.97 | 0.47 | 7.4721531474617E-129 | 2.5176672815057E-124 |
| 74 | 3 | ErPrT | Early proximal tubule | wk16 | CRYL1 | 51084 | 18246 | 1.04 | 0.72 | 0.13 | 1.3202740787993E-203 | 4.4485314811065E-199 |
| 74 | 3 | ErPrT | Early proximal tubule | wk16 | C1QTNF3 | 114899 | 14326 | 1.04 | 0.47 | 0.11 | 7.9640797230124E-91 | 2.6834170218718E-86 |
| 74 | 3 | ErPrT | Early proximal tubule | wk16 | C11orf54 | 28970 | 30204 | 1.04 | 0.74 | 0.18 | 1.0277768613427E-157 | 3.4629913566079E-153 |
| 74 | 3 | ErPrT | Early proximal tubule | wk16 | GK | 2710 | 4289 | 1.03 | 0.63 | 0.04 | 0 | 0 |
| 74 | 3 | ErPrT | Early proximal tubule | wk16 | SLC5A8 | 160728 | 19119 | 1.01 | 0.48 | 0.01 | 0 | 0 |
| 74 | 3 | ErPrT | Early proximal tubule | wk16 | ANPEP | 290 | 500 | 0.99 | 0.54 | 0.01 | 0 | 0 |
| 74 | 3 | ErPrT | Early proximal tubule | wk16 | TNFSF10 | 8743 | 11925 | 0.98 | 0.43 | 0.01 | 0 | 0 |
| 74 | 3 | ErPrT | Early proximal tubule | wk16 | BNIP3 | 664 | 1084 | 0.98 | 0.78 | 0.24 | 7.6865063777721E-133 | 2.5898914589265E-128 |
| 74 | 3 | ErPrT | Early proximal tubule | wk16 | FABP1 | 2168 | 3555 | 0.96 | 0.41 | 0.004 | 0 | 0 |
| 74 | 3 | ErPrT | Early proximal tubule | wk16 | AIG1 | 51390 | 21607 | 0.96 | 0.79 | 0.26 | 1.6668990108842E-121 | 5.6164495272732E-117 |
| 74 | 3 | ErPrT | Early proximal tubule | wk16 | LAMTOR5 | 10542 | 17955 | 0.95 | 0.97 | 0.65 | 3.8486734686266E-124 | 1.2967720385191E-119 |
| 74 | 3 | ErPrT | Early proximal tubule | wk16 | GLS | 2744 | 4331 | 0.95 | 0.66 | 0.13 | 1.0963949667948E-164 | 3.6941932011183E-160 |
| 74 | 3 | ErPrT | Early proximal tubule | wk16 | CEBPD | 1052 | 1835 | 0.95 | 0.86 | 0.34 | 3.0804992826582E-104 | 1.0379434282989E-99 |
| 74 | 3 | ErPrT | Early proximal tubule | wk16 | HPN | 3249 | 5155 | 0.95 | 0.59 | 0.04 | 8.676407548143E-308 | 2.9234287592713E-303 |
| 74 | 3 | ErPrT | Early proximal tubule | wk16 | ATP5IF1 | 93974 | 871 | 0.95 | 0.98 | 0.66 | 4.3300384301065E-113 | 1.4589631486401E-108 |
| 74 | 3 | ErPrT | Early proximal tubule | wk16 | CARMIL1 | 55604 | 21581 | 0.94 | 0.54 | 0.06 | 3.0402966947565E-209 | 1.0243975683313E-204 |
| 74 | 3 | ErPrT | Early proximal tubule | wk16 | S100A10 | 6281 | 10487 | 0.94 | 0.92 | 0.31 | 8.7824653211003E-131 | 2.9591638652915E-126 |
| 74 | 3 | ErPrT | Early proximal tubule | wk16 | MDH1 | 4190 | 6970 | 0.94 | 0.9 | 0.48 | 2.8092225383304E-108 | 9.4653944206504E-104 |
| 74 | 3 | ErPrT | Early proximal tubule | wk16 | CA2 | 760 | 1373 | 0.94 | 0.55 | 0.07 | 2.2231997955752E-193 | 7.4908493912111E-189 |
| 74 | 3 | ErPrT | Early proximal tubule | wk16 | FLRT3 | 23767 | 3762 | 0.94 | 0.71 | 0.22 | 1.968308490837E-106 | 6.6320186290262E-102 |
| 74 | 3 | ErPrT | Early proximal tubule | wk16 | TMEM256 | 254863 | 28618 | 0.93 | 0.84 | 0.33 | 1.6004235880661E-114 | 5.3924672376299E-110 |
| 74 | 3 | ErPrT | Early proximal tubule | wk16 | SLC13A1 | 6561 | 10916 | 0.93 | 0.51 | 0.01 | 0 | 0 |
| 74 | 3 | ErPrT | Early proximal tubule | wk16 | MT1F | 4494 | 7398 | 0.92 | 0.55 | 0.08 | 3.4364904787446E-166 | 1.1578911019082E-161 |
| 74 | 3 | ErPrT | Early proximal tubule | wk16 | FXYD2 | 486 | 4026 | 0.92 | 0.56 | 0.06 | 2.5225944111728E-228 | 8.4996296090055E-224 |
| 74 | 3 | ErPrT | Early proximal tubule | wk16 | CYBA | 1535 | 2577 | 0.91 | 0.89 | 0.42 | 2.5516227530194E-99 | 8.5974377040237E-95 |
| 74 | 3 | ErPrT | Early proximal tubule | wk16 | UGCG | 7357 | 12524 | 0.9 | 0.66 | 0.16 | 1.9715303193583E-135 | 6.6428742580457E-131 |
| 74 | 3 | ErPrT | Early proximal tubule | wk16 | ACSM2A | 123876 | 32017 | 0.9 | 0.45 | 0.008 | 0 | 0 |
| 74 | 3 | ErPrT | Early proximal tubule | wk16 | ASS1 | 445 | 758 | 0.89 | 0.54 | 0.05 | 2.7988496492129E-231 | 9.4304440080579E-227 |
| 74 | 3 | ErPrT | Early proximal tubule | wk16 | ACMSD | 130013 | 19288 | 0.89 | 0.5 | 0.01 | 0 | 0 |
| 74 | 3 | ErPrT | Early proximal tubule | wk16 | ND3 | 4537 | 7458 | 0.88 | 0.99 | 0.91 | 5.0794850839945E-137 | 1.7114817042011E-132 |
| 74 | 3 | ErPrT | Early proximal tubule | wk16 | ERBB3 | 2065 | 3431 | 0.88 | 0.55 | 0.06 | 2.5019314319111E-225 | 8.4300077666812E-221 |
| 74 | 3 | ErPrT | Early proximal tubule | wk16 | UGT3A1 | 133688 | 26625 | 0.88 | 0.54 | 0.04 | 7.1196496440869E-279 | 2.3988947510786E-274 |
| 74 | 3 | ErPrT | Early proximal tubule | wk16 | KLF6 | 1316 | 2235 | 0.87 | 0.85 | 0.48 | 1.1991078438622E-62 | 4.0402739691093E-58 |
| 74 | 3 | ErPrT | Early proximal tubule | wk16 | KCNJ15 | 3772 | 6261 | 0.87 | 0.49 | 0.04 | 6.8009470575526E-250 | 2.2915111015718E-245 |
| 74 | 3 | ErPrT | Early proximal tubule | wk16 | AFP | 174 | 317 | 0.87 | 0.34 | 0.007 | 0 | 0 |
| 74 | 3 | ErPrT | Early proximal tubule | wk16 | SLC9A3R1 | 9368 | 11075 | 0.87 | 0.76 | 0.22 | 2.06968948608E-126 | 6.9736117543979E-122 |
| 74 | 3 | ErPrT | Early proximal tubule | wk16 | TUBB4B | 10383 | 20771 | 0.86 | 0.94 | 0.54 | 1.0519011952989E-87 | 3.5442758874402E-83 |
| 74 | 3 | ErPrT | Early proximal tubule | wk16 | SMIM1 | 388588 | 44204 | 0.86 | 0.5 | 0.04 | 1.1462220319193E-223 | 3.8620805143489E-219 |
| 74 | 3 | ErPrT | Early proximal tubule | wk16 | TMEM176A | 55365 | 24930 | 0.85 | 0.64 | 0.08 | 4.2799540662827E-209 | 1.4420877230933E-204 |
| 74 | 3 | ErPrT | Early proximal tubule | wk16 | CYB5A | 1528 | 2570 | 0.85 | 0.94 | 0.43 | 7.5099660458039E-115 | 2.5304079594732E-110 |
| 74 | 3 | ErPrT | Early proximal tubule | wk16 | AK4 | 205 | 363 | 0.84 | 0.51 | 0.04 | 1.188078296286E-242 | 4.003111011506E-238 |
| 74 | 3 | ErPrT | Early proximal tubule | wk16 | AKR1C3 | 8644 | 386 | 0.83 | 0.49 | 0.03 | 5.8098466165516E-276 | 1.9575697189809E-271 |
| 74 | 3 | ErPrT | Early proximal tubule | wk16 | TMEM176B | 28959 | 29596 | 0.83 | 0.57 | 0.07 | 3.9554309515544E-186 | 1.3327429048167E-181 |
| 74 | 3 | ErPrT | Early proximal tubule | wk16 | IMPA2 | 3613 | 6051 | 0.81 | 0.69 | 0.18 | 2.0940346647619E-125 | 7.0556403994488E-121 |
| 74 | 3 | ErPrT | Early proximal tubule | wk16 | COX3 | 4514 | 7422 | 0.81 | 1 | 0.99 | 2.0161564131624E-154 | 6.7932374185094E-150 |
| 74 | 3 | ErPrT | Early proximal tubule | wk16 | RBM47 | 54502 | 30358 | 0.81 | 0.58 | 0.11 | 2.3127646144522E-146 | 7.7926290919351E-142 |
| 74 | 3 | ErPrT | Early proximal tubule | wk16 | TSPAN12 | 23554 | 21641 | 0.8 | 0.68 | 0.22 | 1.3588357975015E-92 | 4.5784613361015E-88 |
| 74 | 3 | ErPrT | Early proximal tubule | wk16 | SPATS2L | 26010 | 24574 | 0.8 | 0.74 | 0.26 | 2.4765672906325E-95 | 8.3445458290572E-91 |
| 74 | 3 | ErPrT | Early proximal tubule | wk16 | DPYS | 1807 | 3013 | 0.79 | 0.44 | 0.008 | 0 | 0 |
| 74 | 3 | ErPrT | Early proximal tubule | wk16 | OCIAD2 | 132299 | 28685 | 0.79 | 0.87 | 0.45 | 7.9398689065632E-85 | 2.6752594293774E-80 |
| 74 | 3 | ErPrT | Early proximal tubule | wk16 | ND1 | 4535 | 7455 | 0.79 | 1 | 0.96 | 5.4062271710086E-130 | 1.8215741829996E-125 |
| 74 | 3 | ErPrT | Early proximal tubule | wk16 | UGT2A1 | 10941 | 12542 | 0.79 | 0.32 | 0.003 | 0 | 0 |
| 74 | 3 | ErPrT | Early proximal tubule | wk16 | SLC27A2 | 11001 | 10996 | 0.79 | 0.43 | 0.03 | 2.3947608501467E-206 | 8.0689072084842E-202 |
| 74 | 3 | ErPrT | Early proximal tubule | wk16 | ATP6 | 4508 | 7414 | 0.79 | 1 | 0.98 | 1.247616243428E-140 | 4.2037181706062E-136 |
| 74 | 3 | ErPrT | Early proximal tubule | wk16 | FTH1 | 2495 | 3976 | 0.78 | 1 | 0.99 | 1.7318804734465E-131 | 5.8353980672305E-127 |
| 74 | 3 | ErPrT | Early proximal tubule | wk16 | ALDH1A1 | 216 | 402 | 0.78 | 0.62 | 0.13 | 4.1285417473266E-128 | 1.3910708563442E-123 |
| 74 | 3 | ErPrT | Early proximal tubule | wk16 | AKR1A1 | 10327 | 380 | 0.78 | 0.82 | 0.45 | 6.945345026604E-68 | 2.3401645532639E-63 |
| 74 | 3 | ErPrT | Early proximal tubule | wk16 | DPP4 | 1803 | 3009 | 0.78 | 0.51 | 0.08 | 8.8053899097005E-156 | 2.9668880761745E-151 |
| 74 | 3 | ErPrT | Early proximal tubule | wk16 | ND4 | 4538 | 7459 | 0.78 | 1 | 0.99 | 5.6001689472703E-154 | 1.8869209250933E-149 |
| 74 | 3 | ErPrT | Early proximal tubule | wk16 | PDZK1IP1 | 10158 | 16887 | 0.77 | 0.2 | 0.02 | 1.5026556052132E-62 | 5.0630477962053E-58 |
| 74 | 3 | ErPrT | Early proximal tubule | wk16 | DSEL | 92126 | 18144 | 0.77 | 0.52 | 0.1 | 3.5067841088494E-124 | 1.1815758376357E-119 |
| 74 | 3 | ErPrT | Early proximal tubule | wk16 | SNHG8 | 100093630 | 33098 | 0.77 | 0.92 | 0.53 | 5.7075962560273E-84 | 1.9231174825058E-79 |
| 74 | 3 | ErPrT | Early proximal tubule | wk16 | COX1 | 4512 | 7419 | 0.76 | 1 | 0.99 | 4.3299993596733E-152 | 1.4589499842483E-147 |
| 74 | 3 | ErPrT | Early proximal tubule | wk16 | RNF181 | 51255 | 28037 | 0.76 | 0.76 | 0.35 | 1.340941448362E-76 | 4.518168116111E-72 |
| 74 | 3 | ErPrT | Early proximal tubule | wk16 | ADAMTS9-AS1 | 101929335 | 40625 | 0.76 | 0.47 | 0.03 | 1.4850449204119E-255 | 5.0037103548359E-251 |