Marker Genes
Dataset: Single-cell transcriptomics reveals gene expression dynamics of human fetal kidney development
- tissue: Kidney
- ontology: Kidney
- genotype: -
- stage: Fetal
- treatment condition: WT
- cell/nucleus: Cells
- pmid: 30789893
- subset name: wk16
- total genes: Not reported
- clustering: scran
- pseudotime: Monocle 2
- link: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE114530
Rows:100
dataset id | cluster id | cluster name | cell type name | sample id | gene symbol | entrez geneid | species specific geneid |
avg log fc (?)
|
pct 1 | pct 2 | p value | padj |
---|---|---|---|---|---|---|---|---|---|---|---|---|
74 | 3 | ErPrT | Early proximal tubule | wk16 | APOE | 348 | 613 | 2.68 | 0.98 | 0.18 | 0 | 0 |
74 | 3 | ErPrT | Early proximal tubule | wk16 | APOA1 | 335 | 600 | 2.38 | 0.52 | 0.03 | 2.71306317445488e-305 | 9.14139506000829e-301 |
74 | 3 | ErPrT | Early proximal tubule | wk16 | APOM | 55937 | 13916 | 2.32 | 0.91 | 0.06 | 0 | 0 |
74 | 3 | ErPrT | Early proximal tubule | wk16 | SMIM24 | 284422 | 37244 | 2.16 | 0.96 | 0.07 | 0 | 0 |
74 | 3 | ErPrT | Early proximal tubule | wk16 | GPX3 | 2878 | 4555 | 2.11 | 0.85 | 0.09 | 0 | 0 |
74 | 3 | ErPrT | Early proximal tubule | wk16 | SPP1 | 6696 | 11255 | 2.05 | 0.69 | 0.06 | 0 | 0 |
74 | 3 | ErPrT | Early proximal tubule | wk16 | FTL | 2512 | 3999 | 2.02 | 1 | 0.97 | 9.59506320382896e-202 | 3.23296059589813e-197 |
74 | 3 | ErPrT | Early proximal tubule | wk16 | LINC01781 | 101927412 | 52571 | 1.99 | 0.86 | 0.05 | 0 | 0 |
74 | 3 | ErPrT | Early proximal tubule | wk16 | DAB2 | 1601 | 2662 | 1.66 | 0.94 | 0.15 | 0 | 0 |
74 | 3 | ErPrT | Early proximal tubule | wk16 | CUBN | 8029 | 2548 | 1.61 | 0.8 | 0.01 | 0 | 0 |
74 | 3 | ErPrT | Early proximal tubule | wk16 | MPC2 | 25874 | 24515 | 1.6 | 0.98 | 0.41 | 9.44418726553631e-209 | 3.1821244572498e-204 |
74 | 3 | ErPrT | Early proximal tubule | wk16 | GLYATL1 | 92292 | 30519 | 1.55 | 0.68 | 0.02 | 0 | 0 |
74 | 3 | ErPrT | Early proximal tubule | wk16 | AMN | 81693 | 14604 | 1.49 | 0.81 | 0.02 | 0 | 0 |
74 | 3 | ErPrT | Early proximal tubule | wk16 | RIDA | 10247 | 16897 | 1.4 | 0.89 | 0.18 | 1.43317795292797e-263 | 4.8289497945955e-259 |
74 | 3 | ErPrT | Early proximal tubule | wk16 | LGALS2 | 3957 | 6562 | 1.29 | 0.74 | 0.04 | 0 | 0 |
74 | 3 | ErPrT | Early proximal tubule | wk16 | MSRB1 | 51734 | 14133 | 1.27 | 0.76 | 0.16 | 2.21159882883317e-198 | 7.45176109387049e-194 |
74 | 3 | ErPrT | Early proximal tubule | wk16 | BHMT | 635 | 1047 | 1.24 | 0.55 | 0.02 | 0 | 0 |
74 | 3 | ErPrT | Early proximal tubule | wk16 | GCHFR | 2644 | 4194 | 1.24 | 0.77 | 0.15 | 9.69738042877313e-211 | 3.26743536167082e-206 |
74 | 3 | ErPrT | Early proximal tubule | wk16 | ATP6V1F | 9296 | 16832 | 1.2 | 0.97 | 0.5 | 2.71734039429976e-160 | 9.1558067245536e-156 |
74 | 3 | ErPrT | Early proximal tubule | wk16 | GATM | 2628 | 4175 | 1.17 | 0.58 | 0.04 | 0 | 0 |
74 | 3 | ErPrT | Early proximal tubule | wk16 | SERPINF1 | 5176 | 8824 | 1.15 | 0.68 | 0.07 | 4.27448037977323e-285 | 1.44024341916079e-280 |
74 | 3 | ErPrT | Early proximal tubule | wk16 | GLYAT | 10249 | 13734 | 1.15 | 0.61 | 0.008 | 0 | 0 |
74 | 3 | ErPrT | Early proximal tubule | wk16 | PDZK1 | 5174 | 8821 | 1.14 | 0.64 | 0.05 | 0 | 0 |
74 | 3 | ErPrT | Early proximal tubule | wk16 | ACAA2 | 10449 | 83 | 1.14 | 0.86 | 0.29 | 1.24840856771357e-155 | 4.20638782805409e-151 |
74 | 3 | ErPrT | Early proximal tubule | wk16 | ETFB | 2109 | 3482 | 1.14 | 0.91 | 0.37 | 3.06439832711947e-148 | 1.03251837233964e-143 |
74 | 3 | ErPrT | Early proximal tubule | wk16 | CHCHD10 | 400916 | 15559 | 1.12 | 0.84 | 0.25 | 3.99151264510636e-153 | 1.34490027064214e-148 |
74 | 3 | ErPrT | Early proximal tubule | wk16 | LRP2 | 4036 | 6694 | 1.12 | 0.6 | 0.03 | 0 | 0 |
74 | 3 | ErPrT | Early proximal tubule | wk16 | SLC3A1 | 6519 | 11025 | 1.11 | 0.63 | 0.03 | 0 | 0 |
74 | 3 | ErPrT | Early proximal tubule | wk16 | PPP1R16A | 84988 | 14941 | 1.1 | 0.8 | 0.24 | 6.64545692435303e-143 | 2.23912025609151e-138 |
74 | 3 | ErPrT | Early proximal tubule | wk16 | ALDH6A1 | 4329 | 7179 | 1.09 | 0.74 | 0.16 | 4.57976602736375e-181 | 1.54310636525994e-176 |
74 | 3 | ErPrT | Early proximal tubule | wk16 | DNPH1 | 10591 | 21218 | 1.09 | 0.91 | 0.37 | 2.61055873092842e-149 | 8.79601658799023e-145 |
74 | 3 | ErPrT | Early proximal tubule | wk16 | HAO2 | 51179 | 4810 | 1.08 | 0.55 | 0.004 | 0 | 0 |
74 | 3 | ErPrT | Early proximal tubule | wk16 | ANXA4 | 307 | 542 | 1.06 | 0.75 | 0.2 | 1.04041708055681e-144 | 3.5055813112281e-140 |
74 | 3 | ErPrT | Early proximal tubule | wk16 | PSMA2 | 5683 | 9531 | 1.05 | 0.86 | 0.58 | 1.44482968911319e-59 | 4.868209154498e-55 |
74 | 3 | ErPrT | Early proximal tubule | wk16 | DBI | 1622 | 2690 | 1.05 | 0.97 | 0.47 | 7.47215314746173e-129 | 2.51766728150575e-124 |
74 | 3 | ErPrT | Early proximal tubule | wk16 | CRYL1 | 51084 | 18246 | 1.04 | 0.72 | 0.13 | 1.32027407879934e-203 | 4.44853148110649e-199 |
74 | 3 | ErPrT | Early proximal tubule | wk16 | C1QTNF3 | 114899 | 14326 | 1.04 | 0.47 | 0.11 | 7.9640797230124e-91 | 2.6834170218718e-86 |
74 | 3 | ErPrT | Early proximal tubule | wk16 | C11orf54 | 28970 | 30204 | 1.04 | 0.74 | 0.18 | 1.02777686134266e-157 | 3.46299135660795e-153 |
74 | 3 | ErPrT | Early proximal tubule | wk16 | GK | 2710 | 4289 | 1.03 | 0.63 | 0.04 | 0 | 0 |
74 | 3 | ErPrT | Early proximal tubule | wk16 | SLC5A8 | 160728 | 19119 | 1.01 | 0.48 | 0.01 | 0 | 0 |
74 | 3 | ErPrT | Early proximal tubule | wk16 | ANPEP | 290 | 500 | 0.99 | 0.54 | 0.01 | 0 | 0 |
74 | 3 | ErPrT | Early proximal tubule | wk16 | TNFSF10 | 8743 | 11925 | 0.98 | 0.43 | 0.01 | 0 | 0 |
74 | 3 | ErPrT | Early proximal tubule | wk16 | BNIP3 | 664 | 1084 | 0.98 | 0.78 | 0.24 | 7.68650637777212e-133 | 2.58989145892654e-128 |
74 | 3 | ErPrT | Early proximal tubule | wk16 | FABP1 | 2168 | 3555 | 0.96 | 0.41 | 0.004 | 0 | 0 |
74 | 3 | ErPrT | Early proximal tubule | wk16 | AIG1 | 51390 | 21607 | 0.96 | 0.79 | 0.26 | 1.6668990108842e-121 | 5.61644952727323e-117 |
74 | 3 | ErPrT | Early proximal tubule | wk16 | LAMTOR5 | 10542 | 17955 | 0.95 | 0.97 | 0.65 | 3.84867346862664e-124 | 1.29677203851906e-119 |
74 | 3 | ErPrT | Early proximal tubule | wk16 | GLS | 2744 | 4331 | 0.95 | 0.66 | 0.13 | 1.09639496679476e-164 | 3.69419320111827e-160 |
74 | 3 | ErPrT | Early proximal tubule | wk16 | CEBPD | 1052 | 1835 | 0.95 | 0.86 | 0.34 | 3.08049928265824e-104 | 1.03794342829887e-99 |
74 | 3 | ErPrT | Early proximal tubule | wk16 | HPN | 3249 | 5155 | 0.95 | 0.59 | 0.04 | 8.67640754814298e-308 | 2.9234287592713e-303 |
74 | 3 | ErPrT | Early proximal tubule | wk16 | ATP5IF1 | 93974 | 871 | 0.95 | 0.98 | 0.66 | 4.33003843010651e-113 | 1.45896314864009e-108 |
74 | 3 | ErPrT | Early proximal tubule | wk16 | CARMIL1 | 55604 | 21581 | 0.94 | 0.54 | 0.06 | 3.04029669475654e-209 | 1.02439756833127e-204 |
74 | 3 | ErPrT | Early proximal tubule | wk16 | S100A10 | 6281 | 10487 | 0.94 | 0.92 | 0.31 | 8.78246532110031e-131 | 2.95916386529154e-126 |
74 | 3 | ErPrT | Early proximal tubule | wk16 | MDH1 | 4190 | 6970 | 0.94 | 0.9 | 0.48 | 2.80922253833039e-108 | 9.46539442065042e-104 |
74 | 3 | ErPrT | Early proximal tubule | wk16 | CA2 | 760 | 1373 | 0.94 | 0.55 | 0.07 | 2.22319979557521e-193 | 7.49084939121111e-189 |
74 | 3 | ErPrT | Early proximal tubule | wk16 | FLRT3 | 23767 | 3762 | 0.94 | 0.71 | 0.22 | 1.96830849083702e-106 | 6.63201862902624e-102 |
74 | 3 | ErPrT | Early proximal tubule | wk16 | TMEM256 | 254863 | 28618 | 0.93 | 0.84 | 0.33 | 1.60042358806609e-114 | 5.39246723762987e-110 |
74 | 3 | ErPrT | Early proximal tubule | wk16 | SLC13A1 | 6561 | 10916 | 0.93 | 0.51 | 0.01 | 0 | 0 |
74 | 3 | ErPrT | Early proximal tubule | wk16 | MT1F | 4494 | 7398 | 0.92 | 0.55 | 0.08 | 3.4364904787446e-166 | 1.15789110190821e-161 |
74 | 3 | ErPrT | Early proximal tubule | wk16 | FXYD2 | 486 | 4026 | 0.92 | 0.56 | 0.06 | 2.52259441117275e-228 | 8.49962960900548e-224 |
74 | 3 | ErPrT | Early proximal tubule | wk16 | CYBA | 1535 | 2577 | 0.91 | 0.89 | 0.42 | 2.55162275301945e-99 | 8.59743770402372e-95 |
74 | 3 | ErPrT | Early proximal tubule | wk16 | UGCG | 7357 | 12524 | 0.9 | 0.66 | 0.16 | 1.97153031935826e-135 | 6.64287425804572e-131 |
74 | 3 | ErPrT | Early proximal tubule | wk16 | ACSM2A | 123876 | 32017 | 0.9 | 0.45 | 0.008 | 0 | 0 |
74 | 3 | ErPrT | Early proximal tubule | wk16 | ASS1 | 445 | 758 | 0.89 | 0.54 | 0.05 | 2.7988496492129e-231 | 9.43044400805794e-227 |
74 | 3 | ErPrT | Early proximal tubule | wk16 | ACMSD | 130013 | 19288 | 0.89 | 0.5 | 0.01 | 0 | 0 |
74 | 3 | ErPrT | Early proximal tubule | wk16 | ND3 | 4537 | 7458 | 0.88 | 0.99 | 0.91 | 5.07948508399448e-137 | 1.7114817042011e-132 |
74 | 3 | ErPrT | Early proximal tubule | wk16 | ERBB3 | 2065 | 3431 | 0.88 | 0.55 | 0.06 | 2.50193143191108e-225 | 8.4300077666812e-221 |
74 | 3 | ErPrT | Early proximal tubule | wk16 | UGT3A1 | 133688 | 26625 | 0.88 | 0.54 | 0.04 | 7.11964964408689e-279 | 2.39889475107864e-274 |
74 | 3 | ErPrT | Early proximal tubule | wk16 | KLF6 | 1316 | 2235 | 0.87 | 0.85 | 0.48 | 1.19910784386219e-62 | 4.04027396910926e-58 |
74 | 3 | ErPrT | Early proximal tubule | wk16 | KCNJ15 | 3772 | 6261 | 0.87 | 0.49 | 0.04 | 6.80094705755264e-250 | 2.29151110157179e-245 |
74 | 3 | ErPrT | Early proximal tubule | wk16 | AFP | 174 | 317 | 0.87 | 0.34 | 0.007 | 0 | 0 |
74 | 3 | ErPrT | Early proximal tubule | wk16 | SLC9A3R1 | 9368 | 11075 | 0.87 | 0.76 | 0.22 | 2.06968948608e-126 | 6.97361175439794e-122 |
74 | 3 | ErPrT | Early proximal tubule | wk16 | TUBB4B | 10383 | 20771 | 0.86 | 0.94 | 0.54 | 1.05190119529891e-87 | 3.54427588744016e-83 |
74 | 3 | ErPrT | Early proximal tubule | wk16 | SMIM1 | 388588 | 44204 | 0.86 | 0.5 | 0.04 | 1.14622203191931e-223 | 3.86208051434893e-219 |
74 | 3 | ErPrT | Early proximal tubule | wk16 | TMEM176A | 55365 | 24930 | 0.85 | 0.64 | 0.08 | 4.27995406628272e-209 | 1.4420877230933e-204 |
74 | 3 | ErPrT | Early proximal tubule | wk16 | CYB5A | 1528 | 2570 | 0.85 | 0.94 | 0.43 | 7.50996604580392e-115 | 2.53040795947317e-110 |
74 | 3 | ErPrT | Early proximal tubule | wk16 | AK4 | 205 | 363 | 0.84 | 0.51 | 0.04 | 1.18807829628597e-242 | 4.00311101150596e-238 |
74 | 3 | ErPrT | Early proximal tubule | wk16 | AKR1C3 | 8644 | 386 | 0.83 | 0.49 | 0.03 | 5.8098466165516e-276 | 1.9575697189809e-271 |
74 | 3 | ErPrT | Early proximal tubule | wk16 | TMEM176B | 28959 | 29596 | 0.83 | 0.57 | 0.07 | 3.95543095155437e-186 | 1.33274290481673e-181 |
74 | 3 | ErPrT | Early proximal tubule | wk16 | IMPA2 | 3613 | 6051 | 0.81 | 0.69 | 0.18 | 2.09403466476192e-125 | 7.0556403994488e-121 |
74 | 3 | ErPrT | Early proximal tubule | wk16 | COX3 | 4514 | 7422 | 0.81 | 1 | 0.99 | 2.0161564131624e-154 | 6.79323741850939e-150 |
74 | 3 | ErPrT | Early proximal tubule | wk16 | RBM47 | 54502 | 30358 | 0.81 | 0.58 | 0.11 | 2.31276461445216e-146 | 7.79262909193511e-142 |
74 | 3 | ErPrT | Early proximal tubule | wk16 | TSPAN12 | 23554 | 21641 | 0.8 | 0.68 | 0.22 | 1.35883579750149e-92 | 4.57846133610153e-88 |
74 | 3 | ErPrT | Early proximal tubule | wk16 | SPATS2L | 26010 | 24574 | 0.8 | 0.74 | 0.26 | 2.47656729063253e-95 | 8.34454582905724e-91 |
74 | 3 | ErPrT | Early proximal tubule | wk16 | DPYS | 1807 | 3013 | 0.79 | 0.44 | 0.008 | 0 | 0 |
74 | 3 | ErPrT | Early proximal tubule | wk16 | OCIAD2 | 132299 | 28685 | 0.79 | 0.87 | 0.45 | 7.93986890656317e-85 | 2.67525942937739e-80 |
74 | 3 | ErPrT | Early proximal tubule | wk16 | ND1 | 4535 | 7455 | 0.79 | 1 | 0.96 | 5.4062271710086e-130 | 1.82157418299964e-125 |
74 | 3 | ErPrT | Early proximal tubule | wk16 | UGT2A1 | 10941 | 12542 | 0.79 | 0.32 | 0.003 | 0 | 0 |
74 | 3 | ErPrT | Early proximal tubule | wk16 | SLC27A2 | 11001 | 10996 | 0.79 | 0.43 | 0.03 | 2.39476085014669e-206 | 8.06890720848425e-202 |
74 | 3 | ErPrT | Early proximal tubule | wk16 | ATP6 | 4508 | 7414 | 0.79 | 1 | 0.98 | 1.24761624342798e-140 | 4.20371817060624e-136 |
74 | 3 | ErPrT | Early proximal tubule | wk16 | FTH1 | 2495 | 3976 | 0.78 | 1 | 0.99 | 1.73188047344645e-131 | 5.83539806723048e-127 |
74 | 3 | ErPrT | Early proximal tubule | wk16 | ALDH1A1 | 216 | 402 | 0.78 | 0.62 | 0.13 | 4.12854174732661e-128 | 1.39107085634423e-123 |
74 | 3 | ErPrT | Early proximal tubule | wk16 | AKR1A1 | 10327 | 380 | 0.78 | 0.82 | 0.45 | 6.94534502660397e-68 | 2.34016455326394e-63 |
74 | 3 | ErPrT | Early proximal tubule | wk16 | DPP4 | 1803 | 3009 | 0.78 | 0.51 | 0.08 | 8.80538990970048e-156 | 2.96688807617448e-151 |
74 | 3 | ErPrT | Early proximal tubule | wk16 | ND4 | 4538 | 7459 | 0.78 | 1 | 0.99 | 5.60016894727033e-154 | 1.88692092509327e-149 |
74 | 3 | ErPrT | Early proximal tubule | wk16 | PDZK1IP1 | 10158 | 16887 | 0.77 | 0.2 | 0.02 | 1.50265560521319e-62 | 5.06304779620532e-58 |
74 | 3 | ErPrT | Early proximal tubule | wk16 | DSEL | 92126 | 18144 | 0.77 | 0.52 | 0.1 | 3.50678410884941e-124 | 1.18157583763572e-119 |
74 | 3 | ErPrT | Early proximal tubule | wk16 | SNHG8 | 100093630 | 33098 | 0.77 | 0.92 | 0.53 | 5.70759625602728e-84 | 1.92311748250583e-79 |
74 | 3 | ErPrT | Early proximal tubule | wk16 | COX1 | 4512 | 7419 | 0.76 | 1 | 0.99 | 4.32999935967332e-152 | 1.45894998424833e-147 |
74 | 3 | ErPrT | Early proximal tubule | wk16 | RNF181 | 51255 | 28037 | 0.76 | 0.76 | 0.35 | 1.34094144836201e-76 | 4.51816811611096e-72 |
74 | 3 | ErPrT | Early proximal tubule | wk16 | ADAMTS9-AS1 | 101929335 | 40625 | 0.76 | 0.47 | 0.03 | 1.48504492041192e-255 | 5.00371035483591e-251 |