Marker Genes
Dataset: Single-cell transcriptomics reveals gene expression dynamics of human fetal kidney development
- tissue: Kidney
- ontology: Kidney
- genotype: -
- stage: Fetal
- treatment condition: WT
- cell/nucleus: Cells
- pmid: 30789893
- subset name: wk16
- total genes: Not reported
- clustering: scran
- pseudotime: Monocle 2
- link: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE114530
Rows:100
dataset id | cluster id | cluster name | cell type name | sample id | gene symbol | entrez geneid | species specific geneid |
avg log fc (?)
|
pct 1 | pct 2 | p value | padj |
---|---|---|---|---|---|---|---|---|---|---|---|---|
74 | 21 | UBCD | Ureteric bud/collecting duct | wk16 | PHLDA2 | 7262 | 12385 | 2.37 | 0.83 | 0.04 | 0 | 0 |
74 | 21 | UBCD | Ureteric bud/collecting duct | wk16 | AQP2 | 359 | 634 | 2.23 | 0.83 | 0.007 | 0 | 0 |
74 | 21 | UBCD | Ureteric bud/collecting duct | wk16 | S100A6 | 6277 | 10496 | 2.21 | 0.96 | 0.4 | 3.7908676889146e-163 | 1.27729495910289e-158 |
74 | 21 | UBCD | Ureteric bud/collecting duct | wk16 | WFDC2 | 10406 | 15939 | 2.19 | 0.99 | 0.27 | 5.3201462363973e-258 | 1.79257007289171e-253 |
74 | 21 | UBCD | Ureteric bud/collecting duct | wk16 | CLDN4 | 1364 | 2046 | 2.12 | 0.97 | 0.11 | 0 | 0 |
74 | 21 | UBCD | Ureteric bud/collecting duct | wk16 | SPINK1 | 6690 | 11244 | 2.12 | 0.31 | 0.005 | 0 | 0 |
74 | 21 | UBCD | Ureteric bud/collecting duct | wk16 | CYB5A | 1528 | 2570 | 1.99 | 0.99 | 0.43 | 1.10248602014821e-220 | 3.71471639628737e-216 |
74 | 21 | UBCD | Ureteric bud/collecting duct | wk16 | KRT8 | 3856 | 6446 | 1.97 | 0.99 | 0.22 | 2.17738207771237e-302 | 7.33647117264408e-298 |
74 | 21 | UBCD | Ureteric bud/collecting duct | wk16 | KRT19 | 3880 | 6436 | 1.9 | 0.97 | 0.28 | 1.48370106359047e-236 | 4.99918236366172e-232 |
74 | 21 | UBCD | Ureteric bud/collecting duct | wk16 | ADH1C | 126 | 251 | 1.9 | 0.8 | 0.01 | 0 | 0 |
74 | 21 | UBCD | Ureteric bud/collecting duct | wk16 | KRT18 | 3875 | 6430 | 1.79 | 0.99 | 0.34 | 2.84561686907134e-214 | 9.58802147864898e-210 |
74 | 21 | UBCD | Ureteric bud/collecting duct | wk16 | CLU | 1191 | 2095 | 1.78 | 0.92 | 0.23 | 3.07235378937529e-236 | 1.03519888579211e-231 |
74 | 21 | UBCD | Ureteric bud/collecting duct | wk16 | TACSTD2 | 4070 | 11530 | 1.66 | 0.83 | 0.05 | 0 | 0 |
74 | 21 | UBCD | Ureteric bud/collecting duct | wk16 | S100A11 | 6282 | 10488 | 1.64 | 0.99 | 0.5 | 2.45934298315963e-183 | 8.28651024745806e-179 |
74 | 21 | UBCD | Ureteric bud/collecting duct | wk16 | ELF3 | 1999 | 3318 | 1.55 | 0.89 | 0.19 | 7.77241162152789e-233 | 2.61883637175761e-228 |
74 | 21 | UBCD | Ureteric bud/collecting duct | wk16 | SAT1 | 6303 | 10540 | 1.54 | 0.98 | 0.52 | 6.79523030897882e-160 | 2.28958490030732e-155 |
74 | 21 | UBCD | Ureteric bud/collecting duct | wk16 | TMEM176A | 55365 | 24930 | 1.5 | 0.87 | 0.07 | 0 | 0 |
74 | 21 | UBCD | Ureteric bud/collecting duct | wk16 | CTSH | 1512 | 2535 | 1.49 | 0.88 | 0.09 | 0 | 0 |
74 | 21 | UBCD | Ureteric bud/collecting duct | wk16 | CAPS | 828 | 1487 | 1.49 | 0.82 | 0.02 | 0 | 0 |
74 | 21 | UBCD | Ureteric bud/collecting duct | wk16 | ELF5 | 2001 | 3320 | 1.48 | 0.79 | 0.004 | 0 | 0 |
74 | 21 | UBCD | Ureteric bud/collecting duct | wk16 | ATF3 | 467 | 785 | 1.47 | 0.94 | 0.3 | 4.47994168667671e-185 | 1.50947155190885e-180 |
74 | 21 | UBCD | Ureteric bud/collecting duct | wk16 | AGR2 | 10551 | 328 | 1.46 | 0.77 | 0.01 | 0 | 0 |
74 | 21 | UBCD | Ureteric bud/collecting duct | wk16 | CLDN3 | 1365 | 2045 | 1.37 | 0.86 | 0.28 | 1.31315842707234e-149 | 4.42455600417754e-145 |
74 | 21 | UBCD | Ureteric bud/collecting duct | wk16 | GSTM3 | 2947 | 4635 | 1.37 | 0.95 | 0.25 | 1.68068466898248e-215 | 5.66289892366957e-211 |
74 | 21 | UBCD | Ureteric bud/collecting duct | wk16 | HPGD | 3248 | 5154 | 1.33 | 0.59 | 0.04 | 0 | 0 |
74 | 21 | UBCD | Ureteric bud/collecting duct | wk16 | HERPUD1 | 9709 | 13744 | 1.32 | 0.95 | 0.52 | 1.09931907544385e-129 | 3.70404569280052e-125 |
74 | 21 | UBCD | Ureteric bud/collecting duct | wk16 | HMGCS2 | 3158 | 5008 | 1.31 | 0.63 | 0.01 | 0 | 0 |
74 | 21 | UBCD | Ureteric bud/collecting duct | wk16 | CD9 | 928 | 1709 | 1.3 | 0.91 | 0.3 | 7.19880105939407e-162 | 2.42556402895224e-157 |
74 | 21 | UBCD | Ureteric bud/collecting duct | wk16 | DHRS2 | 10202 | 18349 | 1.29 | 0.31 | 0.04 | 7.77120681914812e-107 | 2.61843042564377e-102 |
74 | 21 | UBCD | Ureteric bud/collecting duct | wk16 | TMEM176B | 28959 | 29596 | 1.29 | 0.83 | 0.06 | 0 | 0 |
74 | 21 | UBCD | Ureteric bud/collecting duct | wk16 | GATA3 | 2625 | 4172 | 1.28 | 0.75 | 0.04 | 0 | 0 |
74 | 21 | UBCD | Ureteric bud/collecting duct | wk16 | FXYD3 | 5349 | 4027 | 1.27 | 0.62 | 0.009 | 0 | 0 |
74 | 21 | UBCD | Ureteric bud/collecting duct | wk16 | MMP7 | 4316 | 7174 | 1.26 | 0.62 | 0.01 | 0 | 0 |
74 | 21 | UBCD | Ureteric bud/collecting duct | wk16 | TNFRSF12A | 51330 | 18152 | 1.25 | 0.78 | 0.14 | 9.0825724809162e-202 | 3.06028197171991e-197 |
74 | 21 | UBCD | Ureteric bud/collecting duct | wk16 | CALB1 | 793 | 1434 | 1.23 | 0.5 | 0.005 | 0 | 0 |
74 | 21 | UBCD | Ureteric bud/collecting duct | wk16 | SDF2L1 | 23753 | 10676 | 1.21 | 0.84 | 0.29 | 1.2997049537012e-130 | 4.37922587100084e-126 |
74 | 21 | UBCD | Ureteric bud/collecting duct | wk16 | BTG2 | 7832 | 1131 | 1.2 | 0.93 | 0.33 | 1.52516041313394e-148 | 5.1388754960135e-144 |
74 | 21 | UBCD | Ureteric bud/collecting duct | wk16 | SCIN | 85477 | 21695 | 1.16 | 0.75 | 0.03 | 0 | 0 |
74 | 21 | UBCD | Ureteric bud/collecting duct | wk16 | ADIRF | 10974 | 24043 | 1.12 | 0.2 | 0.01 | 2.47400590842296e-93 | 8.33591550784033e-89 |
74 | 21 | UBCD | Ureteric bud/collecting duct | wk16 | MAL2 | 114569 | 13634 | 1.11 | 0.79 | 0.11 | 8.86201517150423e-270 | 2.98596739188664e-265 |
74 | 21 | UBCD | Ureteric bud/collecting duct | wk16 | LMNA | 4000 | 6636 | 1.1 | 0.96 | 0.43 | 1.39211599876085e-134 | 4.69059564622482e-130 |
74 | 21 | UBCD | Ureteric bud/collecting duct | wk16 | CYSTM1 | 84418 | 30239 | 1.1 | 0.89 | 0.25 | 1.86939504738485e-172 | 6.29873967265853e-168 |
74 | 21 | UBCD | Ureteric bud/collecting duct | wk16 | AOC1 | 26 | 80 | 1.1 | 0.64 | 0.004 | 0 | 0 |
74 | 21 | UBCD | Ureteric bud/collecting duct | wk16 | GDF15 | 9518 | 30142 | 1.1 | 0.45 | 0.01 | 0 | 0 |
74 | 21 | UBCD | Ureteric bud/collecting duct | wk16 | KRT7 | 3855 | 6445 | 1.1 | 0.3 | 0.003 | 0 | 0 |
74 | 21 | UBCD | Ureteric bud/collecting duct | wk16 | MAL | 4118 | 6817 | 1.09 | 0.69 | 0.09 | 6.40769859000719e-222 | 2.15900996291702e-217 |
74 | 21 | UBCD | Ureteric bud/collecting duct | wk16 | KLF6 | 1316 | 2235 | 1.05 | 0.94 | 0.48 | 2.90205733078712e-110 | 9.77819197035413e-106 |
74 | 21 | UBCD | Ureteric bud/collecting duct | wk16 | SNCG | 6623 | 11141 | 1.05 | 0.22 | 0.01 | 9.63723392186751e-102 | 3.24716959763404e-97 |
74 | 21 | UBCD | Ureteric bud/collecting duct | wk16 | ZNF44 | 51710 | 13110 | 1.02 | 0.72 | 0.08 | 5.72789308135766e-290 | 1.92995629483265e-285 |
74 | 21 | UBCD | Ureteric bud/collecting duct | wk16 | AHI1 | 54806 | 21575 | 1.01 | 0.78 | 0.16 | 4.09564385911204e-185 | 1.37998624188921e-180 |
74 | 21 | UBCD | Ureteric bud/collecting duct | wk16 | TSPAN1 | 10103 | 20657 | 1 | 0.66 | 0.02 | 0 | 0 |
74 | 21 | UBCD | Ureteric bud/collecting duct | wk16 | S100A10 | 6281 | 10487 | 0.99 | 0.94 | 0.31 | 5.72298370961065e-136 | 1.92830213111621e-131 |
74 | 21 | UBCD | Ureteric bud/collecting duct | wk16 | AQP3 | 360 | 636 | 0.98 | 0.65 | 0.07 | 4.99387293165325e-251 | 1.68263554559124e-246 |
74 | 21 | UBCD | Ureteric bud/collecting duct | wk16 | GATA2 | 2624 | 4171 | 0.98 | 0.58 | 0.05 | 1.17593432068092e-264 | 3.96219310010229e-260 |
74 | 21 | UBCD | Ureteric bud/collecting duct | wk16 | PTGER1 | 5731 | 9593 | 0.96 | 0.52 | 0.01 | 0 | 0 |
74 | 21 | UBCD | Ureteric bud/collecting duct | wk16 | GMNN | 51053 | 17493 | 0.95 | 0.78 | 0.21 | 7.61392318007859e-135 | 2.56543527629568e-130 |
74 | 21 | UBCD | Ureteric bud/collecting duct | wk16 | LOC102724889 | 102724889 | NULL | 0.95 | 0.61 | 0.08 | 2.87828141948615e-199 | 9.69808141481663e-195 |
74 | 21 | UBCD | Ureteric bud/collecting duct | wk16 | SMIM22 | 440335 | 48329 | 0.95 | 0.61 | 0.007 | 0 | 0 |
74 | 21 | UBCD | Ureteric bud/collecting duct | wk16 | STC1 | 6781 | 11373 | 0.94 | 0.54 | 0.04 | 1.92138122391406e-247 | 6.47390189585602e-243 |
74 | 21 | UBCD | Ureteric bud/collecting duct | wk16 | MAFF | 23764 | 6780 | 0.93 | 0.8 | 0.26 | 4.54394293758636e-113 | 1.53103613339035e-108 |
74 | 21 | UBCD | Ureteric bud/collecting duct | wk16 | PRPS2 | 5634 | 9465 | 0.93 | 0.59 | 0.07 | 2.13225289939946e-200 | 7.18441291923654e-196 |
74 | 21 | UBCD | Ureteric bud/collecting duct | wk16 | S100A4 | 6275 | 10494 | 0.92 | 0.48 | 0.08 | 5.53163680846379e-117 | 1.86382970624379e-112 |
74 | 21 | UBCD | Ureteric bud/collecting duct | wk16 | BLVRB | 645 | 1063 | 0.9 | 0.76 | 0.13 | 1.18130906740954e-194 | 3.98030277172971e-190 |
74 | 21 | UBCD | Ureteric bud/collecting duct | wk16 | CDK2AP2 | 10263 | 30833 | 0.9 | 0.72 | 0.2 | 1.18099531225414e-111 | 3.9792456051091e-107 |
74 | 21 | UBCD | Ureteric bud/collecting duct | wk16 | C9orf16 | 79095 | 17823 | 0.9 | 0.91 | 0.45 | 1.37981531426402e-85 | 4.64914971988118e-81 |
74 | 21 | UBCD | Ureteric bud/collecting duct | wk16 | CLDN7 | 1366 | 2049 | 0.89 | 0.74 | 0.11 | 1.71306809598788e-223 | 5.77201164262156e-219 |
74 | 21 | UBCD | Ureteric bud/collecting duct | wk16 | S100A14 | 57402 | 18901 | 0.89 | 0.59 | 0.02 | 0 | 0 |
74 | 21 | UBCD | Ureteric bud/collecting duct | wk16 | CREM | 1390 | 2352 | 0.88 | 0.72 | 0.22 | 2.35650123831742e-99 | 7.93999527238672e-95 |
74 | 21 | UBCD | Ureteric bud/collecting duct | wk16 | ENSG00000262920 | NULL | 0.88 | 0.48 | 0.02 | 0 | 0 | |
74 | 21 | UBCD | Ureteric bud/collecting duct | wk16 | RDH10 | 157506 | 19975 | 0.87 | 0.63 | 0.07 | 3.02425176277124e-227 | 1.01899138894814e-222 |
74 | 21 | UBCD | Ureteric bud/collecting duct | wk16 | KLF5 | 688 | 6349 | 0.87 | 0.63 | 0.05 | 1.22164828804613e-281 | 4.11622174174263e-277 |
74 | 21 | UBCD | Ureteric bud/collecting duct | wk16 | SELENOK | 58515 | 30394 | 0.86 | 0.96 | 0.58 | 2.57788834007387e-95 | 8.68593697304489e-91 |
74 | 21 | UBCD | Ureteric bud/collecting duct | wk16 | KLF4 | 9314 | 6348 | 0.84 | 0.79 | 0.24 | 1.68386299181627e-107 | 5.67360796462572e-103 |
74 | 21 | UBCD | Ureteric bud/collecting duct | wk16 | NEAT1 | 283131 | 30815 | 0.84 | 0.87 | 0.46 | 6.37530810265484e-69 | 2.14809631210852e-64 |
74 | 21 | UBCD | Ureteric bud/collecting duct | wk16 | PERP | 64065 | 17637 | 0.83 | 0.64 | 0.07 | 9.4317056322023e-225 | 3.17791889571424e-220 |
74 | 21 | UBCD | Ureteric bud/collecting duct | wk16 | S100P | 6286 | 10504 | 0.82 | 0.16 | 0.003 | 1.05195685514467e-167 | 3.54446342772444e-163 |
74 | 21 | UBCD | Ureteric bud/collecting duct | wk16 | ATP1B1 | 481 | 804 | 0.82 | 0.84 | 0.3 | 4.00017437543637e-102 | 1.34781875405953e-97 |
74 | 21 | UBCD | Ureteric bud/collecting duct | wk16 | EPCAM | 4072 | 11529 | 0.81 | 0.89 | 0.41 | 4.84597624162675e-83 | 1.63280323485372e-78 |
74 | 21 | UBCD | Ureteric bud/collecting duct | wk16 | LRRFIP1 | 9208 | 6702 | 0.81 | 0.82 | 0.27 | 4.62009849182526e-110 | 1.5566959858356e-105 |
74 | 21 | UBCD | Ureteric bud/collecting duct | wk16 | PLP2 | 5355 | 9087 | 0.8 | 0.66 | 0.08 | 3.16198129216624e-227 | 1.06539797658249e-222 |
74 | 21 | UBCD | Ureteric bud/collecting duct | wk16 | TSPO | 706 | 1158 | 0.8 | 0.77 | 0.19 | 4.93409229296779e-134 | 1.66249305719257e-129 |
74 | 21 | UBCD | Ureteric bud/collecting duct | wk16 | CAPG | 822 | 1474 | 0.8 | 0.74 | 0.13 | 9.87479727302099e-181 | 3.32721419317169e-176 |
74 | 21 | UBCD | Ureteric bud/collecting duct | wk16 | ANXA11 | 311 | 535 | 0.79 | 0.73 | 0.15 | 2.03605336803789e-151 | 6.86027821826686e-147 |
74 | 21 | UBCD | Ureteric bud/collecting duct | wk16 | FAM3B | 54097 | 1253 | 0.79 | 0.53 | 0.01 | 0 | 0 |
74 | 21 | UBCD | Ureteric bud/collecting duct | wk16 | DBI | 1622 | 2690 | 0.78 | 0.93 | 0.48 | 7.21815128839676e-86 | 2.4320838951124e-81 |
74 | 21 | UBCD | Ureteric bud/collecting duct | wk16 | COMT | 1312 | 2228 | 0.78 | 0.81 | 0.24 | 1.66433114429974e-115 | 5.60779735760356e-111 |
74 | 21 | UBCD | Ureteric bud/collecting duct | wk16 | PRKCA | 5578 | 9393 | 0.78 | 0.64 | 0.12 | 4.63381077059795e-142 | 1.56131620104527e-137 |
74 | 21 | UBCD | Ureteric bud/collecting duct | wk16 | SERP1 | 27230 | 10759 | 0.78 | 0.95 | 0.55 | 7.10458166679845e-92 | 2.39381774681107e-87 |
74 | 21 | UBCD | Ureteric bud/collecting duct | wk16 | ERRFI1 | 54206 | 18185 | 0.77 | 0.6 | 0.08 | 2.40186430158232e-181 | 8.09284157775148e-177 |
74 | 21 | UBCD | Ureteric bud/collecting duct | wk16 | CYTOR | 112597 | 28717 | 0.76 | 0.42 | 0.04 | 1.29077207548384e-164 | 4.34912743113524e-160 |
74 | 21 | UBCD | Ureteric bud/collecting duct | wk16 | VAMP8 | 8673 | 12647 | 0.76 | 0.77 | 0.23 | 2.4173257029082e-105 | 8.14493722337888e-101 |
74 | 21 | UBCD | Ureteric bud/collecting duct | wk16 | UQCRQ | 27089 | 29594 | 0.75 | 0.97 | 0.72 | 4.00294895488438e-69 | 1.34875362085874e-64 |
74 | 21 | UBCD | Ureteric bud/collecting duct | wk16 | RALBP1 | 10928 | 9841 | 0.75 | 0.82 | 0.35 | 2.24666413358689e-78 | 7.56991013170766e-74 |
74 | 21 | UBCD | Ureteric bud/collecting duct | wk16 | DMKN | 93099 | 25063 | 0.75 | 0.74 | 0.18 | 1.70182563255069e-128 | 5.7341312863163e-124 |
74 | 21 | UBCD | Ureteric bud/collecting duct | wk16 | PPDPF | 79144 | 16142 | 0.74 | 0.95 | 0.57 | 2.60046955165951e-84 | 8.76202210736154e-80 |
74 | 21 | UBCD | Ureteric bud/collecting duct | wk16 | RTN4 | 57142 | 14085 | 0.74 | 0.98 | 0.69 | 3.66049585408548e-85 | 1.23336747307556e-80 |
74 | 21 | UBCD | Ureteric bud/collecting duct | wk16 | GPR160 | 26996 | 23693 | 0.74 | 0.53 | 0.02 | 0 | 0 |
74 | 21 | UBCD | Ureteric bud/collecting duct | wk16 | LIMCH1 | 22998 | 29191 | 0.73 | 0.67 | 0.09 | 2.27424934389459e-205 | 7.66285573931844e-201 |
74 | 21 | UBCD | Ureteric bud/collecting duct | wk16 | PIM3 | 415116 | 19310 | 0.73 | 0.61 | 0.15 | 1.61559773516287e-103 | 5.44359500885776e-99 |
74 | 21 | UBCD | Ureteric bud/collecting duct | wk16 | CD24 | 100133941 | 1645 | 0.72 | 0.98 | 0.52 | 4.65144148650817e-77 | 1.56725669446406e-72 |