Marker Genes
Dataset: Single-cell transcriptomics reveals gene expression dynamics of human fetal kidney development
- tissue: Kidney
- ontology: Kidney
- genotype: -
- stage: Fetal
- treatment condition: WT
- cell/nucleus: Cells
- pmid: 30789893
- subset name: wk16
- total genes: Not reported
- clustering: scran
- pseudotime: Monocle 2
- link: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE114530
Rows:100
dataset id | cluster id | cluster name | cell type name | sample id | gene symbol | entrez geneid | species specific geneid |
avg log fc (?)
|
pct 1 | pct 2 | p value | padj |
---|---|---|---|---|---|---|---|---|---|---|---|---|
74 | 2 | End | Endothelial cells | wk16 | PLVAP | 83483 | 13635 | 2.48 | 0.94 | 0.07 | 0 | 0 |
74 | 2 | End | Endothelial cells | wk16 | RAMP2 | 10266 | 9844 | 2.42 | 0.96 | 0.12 | 0 | 0 |
74 | 2 | End | Endothelial cells | wk16 | RNASE1 | 6035 | 10044 | 2.36 | 0.89 | 0.01 | 0 | 0 |
74 | 2 | End | Endothelial cells | wk16 | IGFBP5 | 3488 | 5474 | 2.27 | 0.94 | 0.21 | 1.80679065096153e-191 | 6.08780041934979e-187 |
74 | 2 | End | Endothelial cells | wk16 | EGFL7 | 51162 | 20594 | 2.24 | 0.91 | 0.11 | 1.7475776190778e-305 | 5.88828802972073e-301 |
74 | 2 | End | Endothelial cells | wk16 | CD74 | 972 | 1697 | 2.12 | 0.91 | 0.16 | 1.2046319667809e-232 | 4.05888694887155e-228 |
74 | 2 | End | Endothelial cells | wk16 | TM4SF1 | 4071 | 11853 | 2.09 | 0.84 | 0.04 | 0 | 0 |
74 | 2 | End | Endothelial cells | wk16 | GNG11 | 2791 | 4403 | 1.94 | 0.94 | 0.24 | 2.45595164634014e-189 | 8.27508347717848e-185 |
74 | 2 | End | Endothelial cells | wk16 | TMEM88 | 92162 | 32371 | 1.83 | 0.82 | 0.01 | 0 | 0 |
74 | 2 | End | Endothelial cells | wk16 | VAMP5 | 10791 | 12646 | 1.79 | 0.91 | 0.19 | 1.07698023847396e-199 | 3.62877721551417e-195 |
74 | 2 | End | Endothelial cells | wk16 | PRCP | 5547 | 9344 | 1.75 | 0.88 | 0.21 | 1.30352950373032e-170 | 4.39211230986894e-166 |
74 | 2 | End | Endothelial cells | wk16 | ICAM2 | 3384 | 5345 | 1.67 | 0.75 | 0.01 | 0 | 0 |
74 | 2 | End | Endothelial cells | wk16 | CAVIN2 | 8436 | 10690 | 1.67 | 0.76 | 0.02 | 0 | 0 |
74 | 2 | End | Endothelial cells | wk16 | B2M | 567 | 914 | 1.64 | 1 | 0.82 | 2.64251596172302e-126 | 8.90369328142954e-122 |
74 | 2 | End | Endothelial cells | wk16 | HLA-E | 3133 | 4962 | 1.64 | 0.88 | 0.22 | 1.78747864254641e-161 | 6.02273053819588e-157 |
74 | 2 | End | Endothelial cells | wk16 | APLNR | 187 | 339 | 1.6 | 0.75 | 0.003 | 0 | 0 |
74 | 2 | End | Endothelial cells | wk16 | HLA-B | 3106 | 4932 | 1.58 | 0.8 | 0.12 | 6.47509160892469e-205 | 2.18171736671109e-200 |
74 | 2 | End | Endothelial cells | wk16 | HLA-DRB1 | 3123 | 4948 | 1.54 | 0.77 | 0.04 | 0 | 0 |
74 | 2 | End | Endothelial cells | wk16 | HSPG2 | 3339 | 5273 | 1.53 | 0.72 | 0.08 | 1.16521346079975e-231 | 3.92607023481869e-227 |
74 | 2 | End | Endothelial cells | wk16 | ESAM | 90952 | 17474 | 1.52 | 0.76 | 0.06 | 0 | 0 |
74 | 2 | End | Endothelial cells | wk16 | CD34 | 947 | 1662 | 1.51 | 0.72 | 0.01 | 0 | 0 |
74 | 2 | End | Endothelial cells | wk16 | RBP5 | 83758 | 15847 | 1.51 | 0.68 | 0.01 | 0 | 0 |
74 | 2 | End | Endothelial cells | wk16 | HLA-DRA | 3122 | 4947 | 1.49 | 0.71 | 0.02 | 0 | 0 |
74 | 2 | End | Endothelial cells | wk16 | TCIM | 56892 | 1357 | 1.48 | 0.69 | 0.15 | 4.23086178086569e-116 | 1.42554656844489e-111 |
74 | 2 | End | Endothelial cells | wk16 | SLC2A3 | 6515 | 11007 | 1.46 | 0.71 | 0.15 | 1.0993271754458e-130 | 3.70407298494709e-126 |
74 | 2 | End | Endothelial cells | wk16 | CCDC85B | 11007 | 24926 | 1.44 | 0.83 | 0.23 | 8.16020714816787e-139 | 2.74950019650368e-134 |
74 | 2 | End | Endothelial cells | wk16 | GMFG | 9535 | 4374 | 1.41 | 0.68 | 0.01 | 0 | 0 |
74 | 2 | End | Endothelial cells | wk16 | S100A10 | 6281 | 10487 | 1.41 | 0.91 | 0.32 | 2.19353765734278e-116 | 7.39090578265076e-112 |
74 | 2 | End | Endothelial cells | wk16 | CCL2 | 6347 | 10618 | 1.41 | 0.5 | 0.07 | 8.38964233581358e-124 | 2.82680608862903e-119 |
74 | 2 | End | Endothelial cells | wk16 | S100A16 | 140576 | 20441 | 1.38 | 0.83 | 0.25 | 7.64437603970746e-124 | 2.57569606281903e-119 |
74 | 2 | End | Endothelial cells | wk16 | A2M | 2 | 7 | 1.37 | 0.7 | 0.03 | 0 | 0 |
74 | 2 | End | Endothelial cells | wk16 | CRHBP | 1393 | 2356 | 1.36 | 0.51 | 0.002 | 0 | 0 |
74 | 2 | End | Endothelial cells | wk16 | HSPB1 | 3315 | 5246 | 1.36 | 0.98 | 0.67 | 1.19381490086908e-97 | 4.02243992698829e-93 |
74 | 2 | End | Endothelial cells | wk16 | ECSCR | 641700 | 35454 | 1.35 | 0.64 | 0.005 | 0 | 0 |
74 | 2 | End | Endothelial cells | wk16 | FN1 | 2335 | 3778 | 1.34 | 0.73 | 0.14 | 6.81146166961875e-132 | 2.29505389496134e-127 |
74 | 2 | End | Endothelial cells | wk16 | HLA-A | 3105 | 4931 | 1.34 | 0.88 | 0.36 | 1.27894502075565e-103 | 4.3092773529341e-99 |
74 | 2 | End | Endothelial cells | wk16 | MEF2C | 4208 | 6996 | 1.32 | 0.7 | 0.05 | 0 | 0 |
74 | 2 | End | Endothelial cells | wk16 | RHOC | 389 | 669 | 1.31 | 0.89 | 0.34 | 8.89069121344167e-113 | 2.99562949745704e-108 |
74 | 2 | End | Endothelial cells | wk16 | ENG | 2022 | 3349 | 1.3 | 0.6 | 0.04 | 3.07564758616676e-237 | 1.03630869768303e-232 |
74 | 2 | End | Endothelial cells | wk16 | FAM167B | 84734 | 28133 | 1.29 | 0.52 | 0.005 | 0 | 0 |
74 | 2 | End | Endothelial cells | wk16 | CLDN5 | 7122 | 2047 | 1.29 | 0.72 | 0.18 | 1.08095497660362e-90 | 3.64216969816823e-86 |
74 | 2 | End | Endothelial cells | wk16 | CRIP2 | 1397 | 2361 | 1.27 | 0.83 | 0.31 | 1.03381480310026e-97 | 3.48333559756602e-93 |
74 | 2 | End | Endothelial cells | wk16 | TM4SF18 | 116441 | 25181 | 1.27 | 0.61 | 0.004 | 0 | 0 |
74 | 2 | End | Endothelial cells | wk16 | HLA-DRB5 | 3127 | 4953 | 1.25 | 0.59 | 0.03 | 4.70092114734239e-307 | 1.58392837138554e-302 |
74 | 2 | End | Endothelial cells | wk16 | COTL1 | 23406 | 18304 | 1.22 | 0.83 | 0.36 | 8.4776028571811e-84 | 2.8564435066986e-79 |
74 | 2 | End | Endothelial cells | wk16 | PLPP3 | 8613 | 9229 | 1.22 | 0.74 | 0.19 | 3.36404809079659e-107 | 1.133482363713e-102 |
74 | 2 | End | Endothelial cells | wk16 | KANK3 | 256949 | 24796 | 1.21 | 0.61 | 0.005 | 0 | 0 |
74 | 2 | End | Endothelial cells | wk16 | THY1 | 7070 | 11801 | 1.19 | 0.68 | 0.14 | 2.05190519185156e-113 | 6.91368935342465e-109 |
74 | 2 | End | Endothelial cells | wk16 | HLA-C | 3107 | 4933 | 1.19 | 0.83 | 0.36 | 3.80247853922867e-83 | 1.28120711900771e-78 |
74 | 2 | End | Endothelial cells | wk16 | NRP2 | 8828 | 8005 | 1.19 | 0.75 | 0.22 | 4.63209815526384e-99 | 1.5607391524346e-94 |
74 | 2 | End | Endothelial cells | wk16 | NPDC1 | 56654 | 7899 | 1.17 | 0.69 | 0.13 | 3.27332340582052e-128 | 1.10291358835717e-123 |
74 | 2 | End | Endothelial cells | wk16 | EMCN | 51705 | 16041 | 1.16 | 0.74 | 0.14 | 2.38511127465285e-129 | 8.03639392881531e-125 |
74 | 2 | End | Endothelial cells | wk16 | CLEC14A | 161198 | 19832 | 1.16 | 0.48 | 0.008 | 0 | 0 |
74 | 2 | End | Endothelial cells | wk16 | IL32 | 9235 | 16830 | 1.15 | 0.33 | 0.01 | 9.83786507568165e-179 | 3.31477025860017e-174 |
74 | 2 | End | Endothelial cells | wk16 | RAMP3 | 10268 | 9845 | 1.15 | 0.49 | 0.005 | 0 | 0 |
74 | 2 | End | Endothelial cells | wk16 | PCAT19 | 100505495 | 49593 | 1.15 | 0.59 | 0.003 | 0 | 0 |
74 | 2 | End | Endothelial cells | wk16 | CCL21 | 6366 | 10620 | 1.15 | 0.51 | 0.004 | 0 | 0 |
74 | 2 | End | Endothelial cells | wk16 | CDH5 | 1003 | 1764 | 1.15 | 0.57 | 0.004 | 0 | 0 |
74 | 2 | End | Endothelial cells | wk16 | PECAM1 | 5175 | 8823 | 1.11 | 0.54 | 0.003 | 0 | 0 |
74 | 2 | End | Endothelial cells | wk16 | GIMAP7 | 168537 | 22404 | 1.1 | 0.51 | 0.003 | 0 | 0 |
74 | 2 | End | Endothelial cells | wk16 | S100A6 | 6277 | 10496 | 1.1 | 0.96 | 0.41 | 6.33618817442151e-100 | 2.13491524348958e-95 |
74 | 2 | End | Endothelial cells | wk16 | ARHGAP29 | 9411 | 30207 | 1.09 | 0.75 | 0.24 | 5.25875314555597e-89 | 1.77188428486363e-84 |
74 | 2 | End | Endothelial cells | wk16 | ITM2A | 9452 | 6173 | 1.09 | 0.7 | 0.12 | 5.17629181140771e-135 | 1.74409976293571e-130 |
74 | 2 | End | Endothelial cells | wk16 | GYPC | 2995 | 4704 | 1.08 | 0.73 | 0.25 | 1.28309571053393e-81 | 4.32326268707304e-77 |
74 | 2 | End | Endothelial cells | wk16 | ANXA2 | 302 | 537 | 1.05 | 0.87 | 0.44 | 4.139772437674e-69 | 1.39485492514988e-64 |
74 | 2 | End | Endothelial cells | wk16 | LMO2 | 4005 | 6642 | 1.04 | 0.52 | 0.02 | 0 | 0 |
74 | 2 | End | Endothelial cells | wk16 | KLF2 | 10365 | 6347 | 1.03 | 0.67 | 0.15 | 6.92911295714896e-98 | 2.33469531978177e-93 |
74 | 2 | End | Endothelial cells | wk16 | SLC9A3R2 | 9351 | 11076 | 1.02 | 0.67 | 0.2 | 5.89178180489657e-73 | 1.98517696134185e-68 |
74 | 2 | End | Endothelial cells | wk16 | SPTBN1 | 6711 | 11275 | 1.02 | 0.68 | 0.21 | 2.87095388298225e-79 | 9.6733920133204e-75 |
74 | 2 | End | Endothelial cells | wk16 | FLT1 | 2321 | 3763 | 1.01 | 0.45 | 0.005 | 0 | 0 |
74 | 2 | End | Endothelial cells | wk16 | PCDH17 | 27253 | 14267 | 1.01 | 0.56 | 0.08 | 1.52915321653243e-132 | 5.15232884778436e-128 |
74 | 2 | End | Endothelial cells | wk16 | FKBP1A | 2280 | 3711 | 1.01 | 0.94 | 0.67 | 1.87500184075217e-72 | 6.31763120223035e-68 |
74 | 2 | End | Endothelial cells | wk16 | SH3BP5 | 9467 | 10827 | 1 | 0.61 | 0.15 | 4.31545718375594e-86 | 1.45405014349473e-81 |
74 | 2 | End | Endothelial cells | wk16 | DNASE1L3 | 1776 | 2959 | 0.98 | 0.29 | 0.002 | 0 | 0 |
74 | 2 | End | Endothelial cells | wk16 | FCGRT | 2217 | 3621 | 0.98 | 0.83 | 0.38 | 1.10407588339563e-69 | 3.72007328151325e-65 |
74 | 2 | End | Endothelial cells | wk16 | HYAL2 | 8692 | 5321 | 0.97 | 0.72 | 0.27 | 6.35119925671062e-66 | 2.13997307755608e-61 |
74 | 2 | End | Endothelial cells | wk16 | GSN | 2934 | 4620 | 0.96 | 0.66 | 0.17 | 1.33397151115969e-81 | 4.49468360970145e-77 |
74 | 2 | End | Endothelial cells | wk16 | TMSB10 | 9168 | 11879 | 0.96 | 1 | 0.98 | 1.32592811118894e-93 | 4.46758217784001e-89 |
74 | 2 | End | Endothelial cells | wk16 | NOSTRIN | 115677 | 20203 | 0.96 | 0.48 | 0.007 | 0 | 0 |
74 | 2 | End | Endothelial cells | wk16 | GUK1 | 2987 | 4693 | 0.96 | 0.87 | 0.55 | 2.55427378113647e-67 | 8.60637007816123e-63 |
74 | 2 | End | Endothelial cells | wk16 | NOTCH4 | 4855 | 7884 | 0.96 | 0.47 | 0.03 | 2.09806754954011e-206 | 7.06922880142046e-202 |
74 | 2 | End | Endothelial cells | wk16 | TIE1 | 7075 | 11809 | 0.96 | 0.51 | 0.004 | 0 | 0 |
74 | 2 | End | Endothelial cells | wk16 | IGFBP4 | 3487 | 5473 | 0.95 | 0.87 | 0.43 | 4.3017681748057e-64 | 1.44943776881903e-59 |
74 | 2 | End | Endothelial cells | wk16 | PLAT | 5327 | 9051 | 0.95 | 0.52 | 0.17 | 1.74303142152425e-43 | 5.8729700716838e-39 |
74 | 2 | End | Endothelial cells | wk16 | ADAM15 | 8751 | 193 | 0.94 | 0.44 | 0.02 | 1.89448373707667e-205 | 6.38327350370612e-201 |
74 | 2 | End | Endothelial cells | wk16 | LYL1 | 4066 | 6734 | 0.94 | 0.5 | 0.009 | 0 | 0 |
74 | 2 | End | Endothelial cells | wk16 | FXYD6 | 53826 | 4030 | 0.93 | 0.77 | 0.33 | 1.96457880837009e-64 | 6.61945183692218e-60 |
74 | 2 | End | Endothelial cells | wk16 | IGFBP7 | 3490 | 5476 | 0.93 | 0.96 | 0.56 | 6.94849040940021e-63 | 2.34122435854331e-58 |
74 | 2 | End | Endothelial cells | wk16 | CALM1 | 801 | 1442 | 0.93 | 0.92 | 0.63 | 1.08720616179944e-59 | 3.66323244156705e-55 |
74 | 2 | End | Endothelial cells | wk16 | IFITM3 | 10410 | 5414 | 0.92 | 0.96 | 0.71 | 2.16155264805099e-69 | 7.28313549234301e-65 |
74 | 2 | End | Endothelial cells | wk16 | MSN | 4478 | 7373 | 0.92 | 0.54 | 0.12 | 2.38289916870054e-78 | 8.0289404590196e-74 |
74 | 2 | End | Endothelial cells | wk16 | CD81 | 975 | 1701 | 0.91 | 0.64 | 0.21 | 2.34179720058863e-63 | 7.89045148766333e-59 |
74 | 2 | End | Endothelial cells | wk16 | MYL12A | 10627 | 16701 | 0.89 | 0.95 | 0.71 | 6.03267159966352e-67 | 2.03264836879063e-62 |
74 | 2 | End | Endothelial cells | wk16 | GIMAP4 | 55303 | 21872 | 0.89 | 0.4 | 0.002 | 0 | 0 |
74 | 2 | End | Endothelial cells | wk16 | CAVIN1 | 284119 | 9688 | 0.89 | 0.62 | 0.13 | 4.77401436691826e-94 | 1.60855640078944e-89 |
74 | 2 | End | Endothelial cells | wk16 | TEK | 7010 | 11724 | 0.87 | 0.43 | 0.002 | 0 | 0 |
74 | 2 | End | Endothelial cells | wk16 | CAVIN3 | 112464 | 9400 | 0.87 | 0.52 | 0.09 | 2.74105247133991e-89 | 9.23570219693269e-85 |
74 | 2 | End | Endothelial cells | wk16 | VWA1 | 64856 | 30910 | 0.87 | 0.54 | 0.12 | 2.09795475548985e-82 | 7.06884875314749e-78 |
74 | 2 | End | Endothelial cells | wk16 | ISG15 | 9636 | 4053 | 0.86 | 0.59 | 0.11 | 1.68885228107499e-104 | 5.69041887585406e-100 |
74 | 2 | End | Endothelial cells | wk16 | CAV1 | 857 | 1527 | 0.86 | 0.35 | 0.04 | 9.30645521931293e-93 | 3.1357170215953e-88 |