Marker Genes
Dataset: Single-cell transcriptomics reveals gene expression dynamics of human fetal kidney development
- tissue: Kidney
- ontology: Kidney
- genotype: -
- stage: Fetal
- treatment condition: WT
- cell/nucleus: Cells
- pmid: 30789893
- subset name: wk16
- total genes: Not reported
- clustering: scran
- pseudotime: Monocle 2
- link: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE114530
Rows:100
dataset id | cluster id | cluster name | cell type name | sample id | gene symbol | entrez geneid | species specific geneid |
avg log fc (?)
|
pct 1 | pct 2 | p value | padj |
---|---|---|---|---|---|---|---|---|---|---|---|---|
74 | 18 | SSBm/d | S-shaped body medial/distal | wk16 | CD24 | 100133941 | 1645 | 1.22 | 0.97 | 0.53 | 1.18132269740236e-66 | 3.98034869662751e-62 |
74 | 18 | SSBm/d | S-shaped body medial/distal | wk16 | MAL | 4118 | 6817 | 0.99 | 0.67 | 0.11 | 2.27851116972849e-97 | 7.67721553528318e-93 |
74 | 18 | SSBm/d | S-shaped body medial/distal | wk16 | CLDN10 | 9071 | 2033 | 0.95 | 0.54 | 0.07 | 6.75888425065742e-91 | 2.27733845941651e-86 |
74 | 18 | SSBm/d | S-shaped body medial/distal | wk16 | CEBPD | 1052 | 1835 | 0.93 | 0.84 | 0.36 | 1.50413258877397e-48 | 5.06802434461502e-44 |
74 | 18 | SSBm/d | S-shaped body medial/distal | wk16 | TSPAN8 | 7103 | 11855 | 0.89 | 0.55 | 0.06 | 5.67708010822987e-117 | 1.91283537166697e-112 |
74 | 18 | SSBm/d | S-shaped body medial/distal | wk16 | MAFF | 23764 | 6780 | 0.86 | 0.83 | 0.27 | 5.36634626886273e-57 | 1.80813671183061e-52 |
74 | 18 | SSBm/d | S-shaped body medial/distal | wk16 | TSPAN15 | 23555 | 23298 | 0.83 | 0.58 | 0.06 | 4.21695585933475e-122 | 1.42086110724425e-117 |
74 | 18 | SSBm/d | S-shaped body medial/distal | wk16 | LIMCH1 | 22998 | 29191 | 0.81 | 0.66 | 0.1 | 1.95608320364256e-95 | 6.59082674635325e-91 |
74 | 18 | SSBm/d | S-shaped body medial/distal | wk16 | EGR1 | 1958 | 3238 | 0.8 | 0.92 | 0.43 | 5.37790959769242e-43 | 1.81203285984648e-38 |
74 | 18 | SSBm/d | S-shaped body medial/distal | wk16 | SPP1 | 6696 | 11255 | 0.79 | 0.55 | 0.08 | 3.09112542858587e-81 | 1.04152380190772e-76 |
74 | 18 | SSBm/d | S-shaped body medial/distal | wk16 | PAPPA2 | 60676 | 14615 | 0.78 | 0.28 | 0.01 | 6.4108108549326e-122 | 2.16005860946099e-117 |
74 | 18 | SSBm/d | S-shaped body medial/distal | wk16 | MPC2 | 25874 | 24515 | 0.77 | 0.94 | 0.42 | 2.57079450395156e-49 | 8.66203500161439e-45 |
74 | 18 | SSBm/d | S-shaped body medial/distal | wk16 | CLDN3 | 1365 | 2045 | 0.74 | 0.85 | 0.3 | 4.93709696031619e-51 | 1.66350544980894e-46 |
74 | 18 | SSBm/d | S-shaped body medial/distal | wk16 | TUBB2B | 347733 | 30829 | 0.68 | 0.8 | 0.3 | 7.00972010460707e-37 | 2.36185509204631e-32 |
74 | 18 | SSBm/d | S-shaped body medial/distal | wk16 | MITF | 4286 | 7105 | 0.66 | 0.58 | 0.07 | 1.42225194467445e-108 | 4.79213570238609e-104 |
74 | 18 | SSBm/d | S-shaped body medial/distal | wk16 | HMGA1 | 3159 | 5010 | 0.65 | 0.84 | 0.35 | 3.01730141523225e-37 | 1.01664953884836e-32 |
74 | 18 | SSBm/d | S-shaped body medial/distal | wk16 | ELF3 | 1999 | 3318 | 0.64 | 0.74 | 0.22 | 3.3035549176443e-49 | 1.11309979395107e-44 |
74 | 18 | SSBm/d | S-shaped body medial/distal | wk16 | DNAJB6 | 10049 | 14888 | 0.63 | 0.95 | 0.62 | 9.12388191615773e-30 | 3.07420077283019e-25 |
74 | 18 | SSBm/d | S-shaped body medial/distal | wk16 | IRX1 | 79192 | 14358 | 0.62 | 0.46 | 0.02 | 7.57648115358052e-202 | 2.55281955988742e-197 |
74 | 18 | SSBm/d | S-shaped body medial/distal | wk16 | ODC1 | 4953 | 8109 | 0.6 | 0.9 | 0.58 | 2.97824379896671e-16 | 1.00348946562384e-11 |
74 | 18 | SSBm/d | S-shaped body medial/distal | wk16 | LINC02381 | 400043 | 53304 | 0.6 | 0.53 | 0.14 | 7.04823436906526e-39 | 2.37483208831285e-34 |
74 | 18 | SSBm/d | S-shaped body medial/distal | wk16 | CLDN4 | 1364 | 2046 | 0.57 | 0.64 | 0.14 | 1.5898940535482e-56 | 5.35698902402532e-52 |
74 | 18 | SSBm/d | S-shaped body medial/distal | wk16 | KLF6 | 1316 | 2235 | 0.56 | 0.86 | 0.49 | 9.05873593353073e-24 | 3.05225048544384e-19 |
74 | 18 | SSBm/d | S-shaped body medial/distal | wk16 | CCDC198 | 55195 | 20189 | 0.56 | 0.63 | 0.14 | 9.36691700758345e-57 | 3.15608901653517e-52 |
74 | 18 | SSBm/d | S-shaped body medial/distal | wk16 | MCL1 | 4170 | 6943 | 0.55 | 0.83 | 0.43 | 1.43684237167352e-27 | 4.84129668711677e-23 |
74 | 18 | SSBm/d | S-shaped body medial/distal | wk16 | S100A10 | 6281 | 10487 | 0.55 | 0.81 | 0.33 | 8.58096387225552e-32 | 2.89126996711778e-27 |
74 | 18 | SSBm/d | S-shaped body medial/distal | wk16 | ZFAS1 | 441951 | 33101 | 0.53 | 0.98 | 0.81 | 2.03191664099646e-31 | 6.84633993017347e-27 |
74 | 18 | SSBm/d | S-shaped body medial/distal | wk16 | GMDS | 2762 | 4369 | 0.52 | 0.59 | 0.2 | 2.34851046937071e-30 | 7.91307117549768e-26 |
74 | 18 | SSBm/d | S-shaped body medial/distal | wk16 | DNAJB1 | 3337 | 5270 | 0.52 | 0.91 | 0.52 | 5.55440932255096e-24 | 1.87150267714032e-19 |
74 | 18 | SSBm/d | S-shaped body medial/distal | wk16 | SNHG8 | 100093630 | 33098 | 0.52 | 0.87 | 0.54 | 1.2330625920142e-22 | 4.15468109753263e-18 |
74 | 18 | SSBm/d | S-shaped body medial/distal | wk16 | CARMIL1 | 55604 | 21581 | 0.52 | 0.46 | 0.08 | 7.2970843057882e-58 | 2.45867958599228e-53 |
74 | 18 | SSBm/d | S-shaped body medial/distal | wk16 | DMKN | 93099 | 25063 | 0.52 | 0.66 | 0.2 | 9.80686949576812e-40 | 3.30432660790411e-35 |
74 | 18 | SSBm/d | S-shaped body medial/distal | wk16 | WFDC2 | 10406 | 15939 | 0.51 | 0.74 | 0.3 | 8.60359118286165e-28 | 2.8988940131534e-23 |
74 | 18 | SSBm/d | S-shaped body medial/distal | wk16 | HLA-DMB | 3109 | 4935 | 0.51 | 0.5 | 0.12 | 1.96128455767488e-38 | 6.60835218862975e-34 |
74 | 18 | SSBm/d | S-shaped body medial/distal | wk16 | ERBB4 | 2066 | 3432 | 0.51 | 0.47 | 0.06 | 1.60288658333429e-79 | 5.40076605388654e-75 |
74 | 18 | SSBm/d | S-shaped body medial/distal | wk16 | DEDD2 | 162989 | 24450 | 0.51 | 0.59 | 0.2 | 9.76261165406653e-31 | 3.28941437072118e-26 |
74 | 18 | SSBm/d | S-shaped body medial/distal | wk16 | PLEKHA1 | 59338 | 14335 | 0.51 | 0.64 | 0.23 | 1.66912737750009e-29 | 5.6239577857488e-25 |
74 | 18 | SSBm/d | S-shaped body medial/distal | wk16 | HOXD8 | 3234 | 5139 | 0.5 | 0.57 | 0.16 | 3.20949285729104e-37 | 1.08140652333564e-32 |
74 | 18 | SSBm/d | S-shaped body medial/distal | wk16 | GLRX | 2745 | 4330 | 0.5 | 0.57 | 0.13 | 3.4724041603761e-51 | 1.16999185779712e-46 |
74 | 18 | SSBm/d | S-shaped body medial/distal | wk16 | EPCAM | 4072 | 11529 | 0.5 | 0.9 | 0.42 | 2.97801969843157e-28 | 1.00341395718953e-23 |
74 | 18 | SSBm/d | S-shaped body medial/distal | wk16 | SLC25A25 | 114789 | 20663 | 0.49 | 0.47 | 0.11 | 1.72444768726683e-39 | 5.81035403747685e-35 |
74 | 18 | SSBm/d | S-shaped body medial/distal | wk16 | HERPUD1 | 9709 | 13744 | 0.49 | 0.86 | 0.53 | 3.05332974483784e-18 | 1.02878892422566e-13 |
74 | 18 | SSBm/d | S-shaped body medial/distal | wk16 | HES1 | 3280 | 5192 | 0.48 | 0.96 | 0.68 | 9.20187106954568e-20 | 3.10047843817272e-15 |
74 | 18 | SSBm/d | S-shaped body medial/distal | wk16 | HOTAIRM1 | 100506311 | 37117 | 0.48 | 0.53 | 0.17 | 4.14141720987524e-28 | 1.39540911469536e-23 |
74 | 18 | SSBm/d | S-shaped body medial/distal | wk16 | MECOM | 2122 | 3498 | 0.48 | 0.37 | 0.07 | 9.18480883808277e-44 | 3.09472948990361e-39 |
74 | 18 | SSBm/d | S-shaped body medial/distal | wk16 | EPB41L4A-AS1 | 114915 | 30749 | 0.47 | 0.88 | 0.45 | 2.94326775276366e-25 | 9.91704636616186e-21 |
74 | 18 | SSBm/d | S-shaped body medial/distal | wk16 | OVOL1 | 5017 | 8525 | 0.47 | 0.39 | 0.04 | 2.79452163823686e-88 | 9.41586120787527e-84 |
74 | 18 | SSBm/d | S-shaped body medial/distal | wk16 | MGLL | 11343 | 17038 | 0.47 | 0.47 | 0.06 | 1.32600320463662e-79 | 4.46783519770261e-75 |
74 | 18 | SSBm/d | S-shaped body medial/distal | wk16 | FOSB | 2354 | 3797 | 0.47 | 0.79 | 0.43 | 9.32727259167593e-21 | 3.14273122703929e-16 |
74 | 18 | SSBm/d | S-shaped body medial/distal | wk16 | IER2 | 9592 | 28871 | 0.47 | 0.96 | 0.72 | 6.44485395962049e-21 | 2.17152909315453e-16 |
74 | 18 | SSBm/d | S-shaped body medial/distal | wk16 | MLF1 | 4291 | 7125 | 0.46 | 0.62 | 0.26 | 6.05997209772768e-22 | 2.04184699860836e-17 |
74 | 18 | SSBm/d | S-shaped body medial/distal | wk16 | PERP | 64065 | 17637 | 0.46 | 0.47 | 0.09 | 3.19596287594243e-48 | 1.07684773142004e-43 |
74 | 18 | SSBm/d | S-shaped body medial/distal | wk16 | EFNA1 | 1942 | 3221 | 0.46 | 0.59 | 0.19 | 2.41909141139674e-30 | 8.15088660156018e-26 |
74 | 18 | SSBm/d | S-shaped body medial/distal | wk16 | IMPA2 | 3613 | 6051 | 0.46 | 0.59 | 0.19 | 4.57305621187666e-31 | 1.54084556002972e-26 |
74 | 18 | SSBm/d | S-shaped body medial/distal | wk16 | CYS1 | 192668 | 18525 | 0.46 | 0.45 | 0.06 | 4.01702307602598e-72 | 1.3534957552362e-67 |
74 | 18 | SSBm/d | S-shaped body medial/distal | wk16 | CPVL | 54504 | 14399 | 0.46 | 0.43 | 0.08 | 3.64340115880074e-50 | 1.22760758644632e-45 |
74 | 18 | SSBm/d | S-shaped body medial/distal | wk16 | KLF4 | 9314 | 6348 | 0.46 | 0.7 | 0.26 | 2.00020518035362e-27 | 6.7394913346835e-23 |
74 | 18 | SSBm/d | S-shaped body medial/distal | wk16 | CLDN6 | 9074 | 2048 | 0.46 | 0.33 | 0.03 | 1.2028871086295e-81 | 4.05300782381622e-77 |
74 | 18 | SSBm/d | S-shaped body medial/distal | wk16 | HOXB8 | 3218 | 5119 | 0.45 | 0.44 | 0.08 | 7.64226203337984e-48 | 2.574983769527e-43 |
74 | 18 | SSBm/d | S-shaped body medial/distal | wk16 | C12orf75 | 387882 | 35164 | 0.45 | 0.67 | 0.28 | 1.01919810645656e-23 | 3.43408609989474e-19 |
74 | 18 | SSBm/d | S-shaped body medial/distal | wk16 | DNER | 92737 | 24456 | 0.45 | 0.4 | 0.03 | 1.0861902595828e-104 | 3.65980946063829e-100 |
74 | 18 | SSBm/d | S-shaped body medial/distal | wk16 | ADAMTS9-AS1 | 101929335 | 40625 | 0.45 | 0.36 | 0.05 | 8.22651073417223e-58 | 2.77184052677199e-53 |
74 | 18 | SSBm/d | S-shaped body medial/distal | wk16 | RPS3 | 6188 | 10420 | 0.45 | 1 | 0.99 | 6.51864052642119e-56 | 2.19639073897236e-51 |
74 | 18 | SSBm/d | S-shaped body medial/distal | wk16 | HSPE1 | 3336 | 5269 | 0.44 | 0.97 | 0.83 | 8.99841422704125e-20 | 3.03192568965928e-15 |
74 | 18 | SSBm/d | S-shaped body medial/distal | wk16 | ARG2 | 384 | 664 | 0.44 | 0.39 | 0.1 | 7.96874588732653e-31 | 2.6849892392758e-26 |
74 | 18 | SSBm/d | S-shaped body medial/distal | wk16 | LRATD2 | 157638 | 24166 | 0.44 | 0.47 | 0.08 | 3.07709455389522e-54 | 1.03679623898946e-49 |
74 | 18 | SSBm/d | S-shaped body medial/distal | wk16 | KRT8 | 3856 | 6446 | 0.44 | 0.75 | 0.24 | 5.50810631252401e-38 | 1.85590134094184e-33 |
74 | 18 | SSBm/d | S-shaped body medial/distal | wk16 | IRX2 | 153572 | 14359 | 0.44 | 0.34 | 0.01 | 6.45220200660409e-172 | 2.17400494410518e-167 |
74 | 18 | SSBm/d | S-shaped body medial/distal | wk16 | DCDC2 | 51473 | 18141 | 0.44 | 0.58 | 0.16 | 3.27693637672304e-35 | 1.10413094277306e-30 |
74 | 18 | SSBm/d | S-shaped body medial/distal | wk16 | CYSTM1 | 84418 | 30239 | 0.44 | 0.7 | 0.27 | 1.76374078951629e-26 | 5.94274821619619e-22 |
74 | 18 | SSBm/d | S-shaped body medial/distal | wk16 | HSP90AA1 | 3320 | 5253 | 0.44 | 1 | 0.98 | 5.76903973795002e-21 | 1.94382024930488e-16 |
74 | 18 | SSBm/d | S-shaped body medial/distal | wk16 | MRPL18 | 29074 | 14477 | 0.44 | 0.79 | 0.45 | 1.51556929629166e-16 | 5.10655918692512e-12 |
74 | 18 | SSBm/d | S-shaped body medial/distal | wk16 | RPL12 | 6136 | 10302 | 0.43 | 1 | 0.99 | 4.36207684132114e-44 | 1.46975817091475e-39 |
74 | 18 | SSBm/d | S-shaped body medial/distal | wk16 | HES4 | 57801 | 24149 | 0.43 | 0.84 | 0.48 | 2.36076855922253e-15 | 7.9543735834444e-11 |
74 | 18 | SSBm/d | S-shaped body medial/distal | wk16 | RPSA | 3921 | 6502 | 0.43 | 1 | 0.98 | 4.6575656709333e-39 | 1.56932017716427e-34 |
74 | 18 | SSBm/d | S-shaped body medial/distal | wk16 | ATF3 | 467 | 785 | 0.43 | 0.76 | 0.32 | 4.49810871603336e-24 | 1.51559275078028e-19 |
74 | 18 | SSBm/d | S-shaped body medial/distal | wk16 | EEF2 | 1938 | 3214 | 0.43 | 0.99 | 0.92 | 1.87186724279775e-29 | 6.30706948788275e-25 |
74 | 18 | SSBm/d | S-shaped body medial/distal | wk16 | CKB | 1152 | 1991 | 0.43 | 0.74 | 0.38 | 1.96620781372074e-16 | 6.62494060755065e-12 |
74 | 18 | SSBm/d | S-shaped body medial/distal | wk16 | RPL3 | 6122 | 10332 | 0.43 | 1 | 1 | 6.71288013846568e-62 | 2.26183783385462e-57 |
74 | 18 | SSBm/d | S-shaped body medial/distal | wk16 | PTGR1 | 22949 | 18429 | 0.43 | 0.6 | 0.35 | 6.99636544626675e-09 | 0.000235735537346512 |
74 | 18 | SSBm/d | S-shaped body medial/distal | wk16 | AKIRIN1 | 79647 | 25744 | 0.42 | 0.72 | 0.37 | 1.35700117875579e-17 | 4.57227977169977e-13 |
74 | 18 | SSBm/d | S-shaped body medial/distal | wk16 | ANXA4 | 307 | 542 | 0.42 | 0.61 | 0.22 | 8.22110980365604e-25 | 2.77002073724386e-20 |
74 | 18 | SSBm/d | S-shaped body medial/distal | wk16 | RPL8 | 6132 | 10368 | 0.42 | 1 | 0.99 | 5.55982739722249e-53 | 1.87332824322015e-48 |
74 | 18 | SSBm/d | S-shaped body medial/distal | wk16 | DNAJA1 | 3301 | 5229 | 0.42 | 0.96 | 0.72 | 1.10509425922283e-15 | 3.7235045970254e-11 |
74 | 18 | SSBm/d | S-shaped body medial/distal | wk16 | PPP1R15A | 23645 | 14375 | 0.41 | 0.91 | 0.55 | 1.78278271648991e-16 | 6.00690808494112e-12 |
74 | 18 | SSBm/d | S-shaped body medial/distal | wk16 | HPN | 3249 | 5155 | 0.41 | 0.42 | 0.06 | 2.01812572001581e-56 | 6.79987280102127e-52 |
74 | 18 | SSBm/d | S-shaped body medial/distal | wk16 | PCBD1 | 5092 | 8646 | 0.41 | 0.85 | 0.46 | 8.40929993006526e-20 | 2.83342951843619e-15 |
74 | 18 | SSBm/d | S-shaped body medial/distal | wk16 | RPS6 | 6194 | 10429 | 0.4 | 1 | 1 | 8.94320663300722e-51 | 3.01332404292545e-46 |
74 | 18 | SSBm/d | S-shaped body medial/distal | wk16 | NOP53 | 29997 | 4333 | 0.4 | 0.95 | 0.72 | 7.02197970138233e-20 | 2.36598584058376e-15 |
74 | 18 | SSBm/d | S-shaped body medial/distal | wk16 | DDIT3 | 1649 | 2726 | 0.4 | 0.68 | 0.26 | 3.97589542905937e-25 | 1.33963820586726e-20 |
74 | 18 | SSBm/d | S-shaped body medial/distal | wk16 | CKS2 | 1164 | 2000 | 0.4 | 0.76 | 0.38 | 9.21210616078431e-19 | 3.10392704981466e-14 |
74 | 18 | SSBm/d | S-shaped body medial/distal | wk16 | LDHB | 3945 | 6541 | 0.4 | 1 | 0.9 | 2.41340210759569e-21 | 8.13171706133292e-17 |
74 | 18 | SSBm/d | S-shaped body medial/distal | wk16 | ZFP36 | 7538 | 12862 | 0.4 | 0.7 | 0.26 | 8.88081045378767e-28 | 2.99230027429922e-23 |
74 | 18 | SSBm/d | S-shaped body medial/distal | wk16 | CLDN19 | 149461 | 2040 | 0.4 | 0.34 | 0.03 | 1.05766891620641e-70 | 3.56370964626586e-66 |
74 | 18 | SSBm/d | S-shaped body medial/distal | wk16 | RPS9 | 6203 | 10442 | 0.4 | 1 | 0.99 | 4.2310508727061e-46 | 1.42561028104959e-41 |
74 | 18 | SSBm/d | S-shaped body medial/distal | wk16 | MT1F | 4494 | 7398 | 0.39 | 0.41 | 0.1 | 2.36952270703984e-32 | 7.98386980910004e-28 |
74 | 18 | SSBm/d | S-shaped body medial/distal | wk16 | SOSTDC1 | 25928 | 21748 | 0.39 | 0.42 | 0.07 | 1.62852321950626e-53 | 5.4871461358044e-49 |
74 | 18 | SSBm/d | S-shaped body medial/distal | wk16 | TMEM161B-AS1 | 100505894 | 43839 | 0.39 | 0.43 | 0.08 | 1.86790550249788e-49 | 6.29372080011637e-45 |
74 | 18 | SSBm/d | S-shaped body medial/distal | wk16 | RPS28 | 6234 | 10418 | 0.39 | 1 | 0.99 | 1.90221993201253e-40 | 6.40933983892301e-36 |
74 | 18 | SSBm/d | S-shaped body medial/distal | wk16 | EIF3F | 8665 | 3275 | 0.39 | 0.97 | 0.75 | 1.52041681384538e-19 | 5.12289241257062e-15 |