Marker Genes
Dataset: Single-cell transcriptomics reveals gene expression dynamics of human fetal kidney development
- tissue: Kidney
- ontology: Kidney
- genotype: -
- stage: Fetal
- treatment condition: WT
- cell/nucleus: Cells
- pmid: 30789893
- subset name: wk16
- total genes: Not reported
- clustering: scran
- pseudotime: Monocle 2
- link: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE114530
Rows:100
| dataset id | cluster id | cluster name | cell type name | sample id | gene symbol | entrez geneid | species specific geneid |
avg log fc (?)
|
pct 1 | pct 2 | p value | padj |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 74 | 18 | SSBm/d | S-shaped body medial/distal | wk16 | CD24 | 100133941 | 1645 | 1.22 | 0.97 | 0.53 | 1.1813226974024E-66 | 3.9803486966275E-62 |
| 74 | 18 | SSBm/d | S-shaped body medial/distal | wk16 | MAL | 4118 | 6817 | 0.99 | 0.67 | 0.11 | 2.2785111697285E-97 | 7.6772155352832E-93 |
| 74 | 18 | SSBm/d | S-shaped body medial/distal | wk16 | CLDN10 | 9071 | 2033 | 0.95 | 0.54 | 0.07 | 6.7588842506574E-91 | 2.2773384594165E-86 |
| 74 | 18 | SSBm/d | S-shaped body medial/distal | wk16 | CEBPD | 1052 | 1835 | 0.93 | 0.84 | 0.36 | 1.504132588774E-48 | 5.068024344615E-44 |
| 74 | 18 | SSBm/d | S-shaped body medial/distal | wk16 | TSPAN8 | 7103 | 11855 | 0.89 | 0.55 | 0.06 | 5.6770801082299E-117 | 1.912835371667E-112 |
| 74 | 18 | SSBm/d | S-shaped body medial/distal | wk16 | MAFF | 23764 | 6780 | 0.86 | 0.83 | 0.27 | 5.3663462688627E-57 | 1.8081367118306E-52 |
| 74 | 18 | SSBm/d | S-shaped body medial/distal | wk16 | TSPAN15 | 23555 | 23298 | 0.83 | 0.58 | 0.06 | 4.2169558593347E-122 | 1.4208611072443E-117 |
| 74 | 18 | SSBm/d | S-shaped body medial/distal | wk16 | LIMCH1 | 22998 | 29191 | 0.81 | 0.66 | 0.1 | 1.9560832036426E-95 | 6.5908267463533E-91 |
| 74 | 18 | SSBm/d | S-shaped body medial/distal | wk16 | EGR1 | 1958 | 3238 | 0.8 | 0.92 | 0.43 | 5.3779095976924E-43 | 1.8120328598465E-38 |
| 74 | 18 | SSBm/d | S-shaped body medial/distal | wk16 | SPP1 | 6696 | 11255 | 0.79 | 0.55 | 0.08 | 3.0911254285859E-81 | 1.0415238019077E-76 |
| 74 | 18 | SSBm/d | S-shaped body medial/distal | wk16 | PAPPA2 | 60676 | 14615 | 0.78 | 0.28 | 0.01 | 6.4108108549326E-122 | 2.160058609461E-117 |
| 74 | 18 | SSBm/d | S-shaped body medial/distal | wk16 | MPC2 | 25874 | 24515 | 0.77 | 0.94 | 0.42 | 2.5707945039516E-49 | 8.6620350016144E-45 |
| 74 | 18 | SSBm/d | S-shaped body medial/distal | wk16 | CLDN3 | 1365 | 2045 | 0.74 | 0.85 | 0.3 | 4.9370969603162E-51 | 1.6635054498089E-46 |
| 74 | 18 | SSBm/d | S-shaped body medial/distal | wk16 | TUBB2B | 347733 | 30829 | 0.68 | 0.8 | 0.3 | 7.0097201046071E-37 | 2.3618550920463E-32 |
| 74 | 18 | SSBm/d | S-shaped body medial/distal | wk16 | MITF | 4286 | 7105 | 0.66 | 0.58 | 0.07 | 1.4222519446745E-108 | 4.7921357023861E-104 |
| 74 | 18 | SSBm/d | S-shaped body medial/distal | wk16 | HMGA1 | 3159 | 5010 | 0.65 | 0.84 | 0.35 | 3.0173014152322E-37 | 1.0166495388484E-32 |
| 74 | 18 | SSBm/d | S-shaped body medial/distal | wk16 | ELF3 | 1999 | 3318 | 0.64 | 0.74 | 0.22 | 3.3035549176443E-49 | 1.1130997939511E-44 |
| 74 | 18 | SSBm/d | S-shaped body medial/distal | wk16 | DNAJB6 | 10049 | 14888 | 0.63 | 0.95 | 0.62 | 9.1238819161577E-30 | 3.0742007728302E-25 |
| 74 | 18 | SSBm/d | S-shaped body medial/distal | wk16 | IRX1 | 79192 | 14358 | 0.62 | 0.46 | 0.02 | 7.5764811535805E-202 | 2.5528195598874E-197 |
| 74 | 18 | SSBm/d | S-shaped body medial/distal | wk16 | ODC1 | 4953 | 8109 | 0.6 | 0.9 | 0.58 | 2.9782437989667E-16 | 1.0034894656238E-11 |
| 74 | 18 | SSBm/d | S-shaped body medial/distal | wk16 | LINC02381 | 400043 | 53304 | 0.6 | 0.53 | 0.14 | 7.0482343690653E-39 | 2.3748320883128E-34 |
| 74 | 18 | SSBm/d | S-shaped body medial/distal | wk16 | CLDN4 | 1364 | 2046 | 0.57 | 0.64 | 0.14 | 1.5898940535482E-56 | 5.3569890240253E-52 |
| 74 | 18 | SSBm/d | S-shaped body medial/distal | wk16 | KLF6 | 1316 | 2235 | 0.56 | 0.86 | 0.49 | 9.0587359335307E-24 | 3.0522504854438E-19 |
| 74 | 18 | SSBm/d | S-shaped body medial/distal | wk16 | CCDC198 | 55195 | 20189 | 0.56 | 0.63 | 0.14 | 9.3669170075835E-57 | 3.1560890165352E-52 |
| 74 | 18 | SSBm/d | S-shaped body medial/distal | wk16 | MCL1 | 4170 | 6943 | 0.55 | 0.83 | 0.43 | 1.4368423716735E-27 | 4.8412966871168E-23 |
| 74 | 18 | SSBm/d | S-shaped body medial/distal | wk16 | S100A10 | 6281 | 10487 | 0.55 | 0.81 | 0.33 | 8.5809638722555E-32 | 2.8912699671178E-27 |
| 74 | 18 | SSBm/d | S-shaped body medial/distal | wk16 | ZFAS1 | 441951 | 33101 | 0.53 | 0.98 | 0.81 | 2.0319166409965E-31 | 6.8463399301735E-27 |
| 74 | 18 | SSBm/d | S-shaped body medial/distal | wk16 | GMDS | 2762 | 4369 | 0.52 | 0.59 | 0.2 | 2.3485104693707E-30 | 7.9130711754977E-26 |
| 74 | 18 | SSBm/d | S-shaped body medial/distal | wk16 | DNAJB1 | 3337 | 5270 | 0.52 | 0.91 | 0.52 | 5.554409322551E-24 | 1.8715026771403E-19 |
| 74 | 18 | SSBm/d | S-shaped body medial/distal | wk16 | SNHG8 | 100093630 | 33098 | 0.52 | 0.87 | 0.54 | 1.2330625920142E-22 | 4.1546810975326E-18 |
| 74 | 18 | SSBm/d | S-shaped body medial/distal | wk16 | CARMIL1 | 55604 | 21581 | 0.52 | 0.46 | 0.08 | 7.2970843057882E-58 | 2.4586795859923E-53 |
| 74 | 18 | SSBm/d | S-shaped body medial/distal | wk16 | DMKN | 93099 | 25063 | 0.52 | 0.66 | 0.2 | 9.8068694957681E-40 | 3.3043266079041E-35 |
| 74 | 18 | SSBm/d | S-shaped body medial/distal | wk16 | WFDC2 | 10406 | 15939 | 0.51 | 0.74 | 0.3 | 8.6035911828617E-28 | 2.8988940131534E-23 |
| 74 | 18 | SSBm/d | S-shaped body medial/distal | wk16 | HLA-DMB | 3109 | 4935 | 0.51 | 0.5 | 0.12 | 1.9612845576749E-38 | 6.6083521886297E-34 |
| 74 | 18 | SSBm/d | S-shaped body medial/distal | wk16 | ERBB4 | 2066 | 3432 | 0.51 | 0.47 | 0.06 | 1.6028865833343E-79 | 5.4007660538865E-75 |
| 74 | 18 | SSBm/d | S-shaped body medial/distal | wk16 | DEDD2 | 162989 | 24450 | 0.51 | 0.59 | 0.2 | 9.7626116540665E-31 | 3.2894143707212E-26 |
| 74 | 18 | SSBm/d | S-shaped body medial/distal | wk16 | PLEKHA1 | 59338 | 14335 | 0.51 | 0.64 | 0.23 | 1.6691273775001E-29 | 5.6239577857488E-25 |
| 74 | 18 | SSBm/d | S-shaped body medial/distal | wk16 | HOXD8 | 3234 | 5139 | 0.5 | 0.57 | 0.16 | 3.209492857291E-37 | 1.0814065233356E-32 |
| 74 | 18 | SSBm/d | S-shaped body medial/distal | wk16 | GLRX | 2745 | 4330 | 0.5 | 0.57 | 0.13 | 3.4724041603761E-51 | 1.1699918577971E-46 |
| 74 | 18 | SSBm/d | S-shaped body medial/distal | wk16 | EPCAM | 4072 | 11529 | 0.5 | 0.9 | 0.42 | 2.9780196984316E-28 | 1.0034139571895E-23 |
| 74 | 18 | SSBm/d | S-shaped body medial/distal | wk16 | SLC25A25 | 114789 | 20663 | 0.49 | 0.47 | 0.11 | 1.7244476872668E-39 | 5.8103540374769E-35 |
| 74 | 18 | SSBm/d | S-shaped body medial/distal | wk16 | HERPUD1 | 9709 | 13744 | 0.49 | 0.86 | 0.53 | 3.0533297448378E-18 | 1.0287889242257E-13 |
| 74 | 18 | SSBm/d | S-shaped body medial/distal | wk16 | HES1 | 3280 | 5192 | 0.48 | 0.96 | 0.68 | 9.2018710695457E-20 | 3.1004784381727E-15 |
| 74 | 18 | SSBm/d | S-shaped body medial/distal | wk16 | HOTAIRM1 | 100506311 | 37117 | 0.48 | 0.53 | 0.17 | 4.1414172098752E-28 | 1.3954091146954E-23 |
| 74 | 18 | SSBm/d | S-shaped body medial/distal | wk16 | MECOM | 2122 | 3498 | 0.48 | 0.37 | 0.07 | 9.1848088380828E-44 | 3.0947294899036E-39 |
| 74 | 18 | SSBm/d | S-shaped body medial/distal | wk16 | EPB41L4A-AS1 | 114915 | 30749 | 0.47 | 0.88 | 0.45 | 2.9432677527637E-25 | 9.9170463661619E-21 |
| 74 | 18 | SSBm/d | S-shaped body medial/distal | wk16 | OVOL1 | 5017 | 8525 | 0.47 | 0.39 | 0.04 | 2.7945216382369E-88 | 9.4158612078753E-84 |
| 74 | 18 | SSBm/d | S-shaped body medial/distal | wk16 | MGLL | 11343 | 17038 | 0.47 | 0.47 | 0.06 | 1.3260032046366E-79 | 4.4678351977026E-75 |
| 74 | 18 | SSBm/d | S-shaped body medial/distal | wk16 | FOSB | 2354 | 3797 | 0.47 | 0.79 | 0.43 | 9.3272725916759E-21 | 3.1427312270393E-16 |
| 74 | 18 | SSBm/d | S-shaped body medial/distal | wk16 | IER2 | 9592 | 28871 | 0.47 | 0.96 | 0.72 | 6.4448539596205E-21 | 2.1715290931545E-16 |
| 74 | 18 | SSBm/d | S-shaped body medial/distal | wk16 | MLF1 | 4291 | 7125 | 0.46 | 0.62 | 0.26 | 6.0599720977277E-22 | 2.0418469986084E-17 |
| 74 | 18 | SSBm/d | S-shaped body medial/distal | wk16 | PERP | 64065 | 17637 | 0.46 | 0.47 | 0.09 | 3.1959628759424E-48 | 1.07684773142E-43 |
| 74 | 18 | SSBm/d | S-shaped body medial/distal | wk16 | EFNA1 | 1942 | 3221 | 0.46 | 0.59 | 0.19 | 2.4190914113967E-30 | 8.1508866015602E-26 |
| 74 | 18 | SSBm/d | S-shaped body medial/distal | wk16 | IMPA2 | 3613 | 6051 | 0.46 | 0.59 | 0.19 | 4.5730562118767E-31 | 1.5408455600297E-26 |
| 74 | 18 | SSBm/d | S-shaped body medial/distal | wk16 | CYS1 | 192668 | 18525 | 0.46 | 0.45 | 0.06 | 4.017023076026E-72 | 1.3534957552362E-67 |
| 74 | 18 | SSBm/d | S-shaped body medial/distal | wk16 | CPVL | 54504 | 14399 | 0.46 | 0.43 | 0.08 | 3.6434011588007E-50 | 1.2276075864463E-45 |
| 74 | 18 | SSBm/d | S-shaped body medial/distal | wk16 | KLF4 | 9314 | 6348 | 0.46 | 0.7 | 0.26 | 2.0002051803536E-27 | 6.7394913346835E-23 |
| 74 | 18 | SSBm/d | S-shaped body medial/distal | wk16 | CLDN6 | 9074 | 2048 | 0.46 | 0.33 | 0.03 | 1.2028871086295E-81 | 4.0530078238162E-77 |
| 74 | 18 | SSBm/d | S-shaped body medial/distal | wk16 | HOXB8 | 3218 | 5119 | 0.45 | 0.44 | 0.08 | 7.6422620333798E-48 | 2.574983769527E-43 |
| 74 | 18 | SSBm/d | S-shaped body medial/distal | wk16 | C12orf75 | 387882 | 35164 | 0.45 | 0.67 | 0.28 | 1.0191981064566E-23 | 3.4340860998947E-19 |
| 74 | 18 | SSBm/d | S-shaped body medial/distal | wk16 | DNER | 92737 | 24456 | 0.45 | 0.4 | 0.03 | 1.0861902595828E-104 | 3.6598094606383E-100 |
| 74 | 18 | SSBm/d | S-shaped body medial/distal | wk16 | ADAMTS9-AS1 | 101929335 | 40625 | 0.45 | 0.36 | 0.05 | 8.2265107341722E-58 | 2.771840526772E-53 |
| 74 | 18 | SSBm/d | S-shaped body medial/distal | wk16 | RPS3 | 6188 | 10420 | 0.45 | 1 | 0.99 | 6.5186405264212E-56 | 2.1963907389724E-51 |
| 74 | 18 | SSBm/d | S-shaped body medial/distal | wk16 | HSPE1 | 3336 | 5269 | 0.44 | 0.97 | 0.83 | 8.9984142270412E-20 | 3.0319256896593E-15 |
| 74 | 18 | SSBm/d | S-shaped body medial/distal | wk16 | ARG2 | 384 | 664 | 0.44 | 0.39 | 0.1 | 7.9687458873265E-31 | 2.6849892392758E-26 |
| 74 | 18 | SSBm/d | S-shaped body medial/distal | wk16 | LRATD2 | 157638 | 24166 | 0.44 | 0.47 | 0.08 | 3.0770945538952E-54 | 1.0367962389895E-49 |
| 74 | 18 | SSBm/d | S-shaped body medial/distal | wk16 | KRT8 | 3856 | 6446 | 0.44 | 0.75 | 0.24 | 5.508106312524E-38 | 1.8559013409418E-33 |
| 74 | 18 | SSBm/d | S-shaped body medial/distal | wk16 | IRX2 | 153572 | 14359 | 0.44 | 0.34 | 0.01 | 6.4522020066041E-172 | 2.1740049441052E-167 |
| 74 | 18 | SSBm/d | S-shaped body medial/distal | wk16 | DCDC2 | 51473 | 18141 | 0.44 | 0.58 | 0.16 | 3.276936376723E-35 | 1.1041309427731E-30 |
| 74 | 18 | SSBm/d | S-shaped body medial/distal | wk16 | CYSTM1 | 84418 | 30239 | 0.44 | 0.7 | 0.27 | 1.7637407895163E-26 | 5.9427482161962E-22 |
| 74 | 18 | SSBm/d | S-shaped body medial/distal | wk16 | HSP90AA1 | 3320 | 5253 | 0.44 | 1 | 0.98 | 5.76903973795E-21 | 1.9438202493049E-16 |
| 74 | 18 | SSBm/d | S-shaped body medial/distal | wk16 | MRPL18 | 29074 | 14477 | 0.44 | 0.79 | 0.45 | 1.5155692962917E-16 | 5.1065591869251E-12 |
| 74 | 18 | SSBm/d | S-shaped body medial/distal | wk16 | RPL12 | 6136 | 10302 | 0.43 | 1 | 0.99 | 4.3620768413211E-44 | 1.4697581709148E-39 |
| 74 | 18 | SSBm/d | S-shaped body medial/distal | wk16 | HES4 | 57801 | 24149 | 0.43 | 0.84 | 0.48 | 2.3607685592225E-15 | 7.9543735834444E-11 |
| 74 | 18 | SSBm/d | S-shaped body medial/distal | wk16 | RPSA | 3921 | 6502 | 0.43 | 1 | 0.98 | 4.6575656709333E-39 | 1.5693201771643E-34 |
| 74 | 18 | SSBm/d | S-shaped body medial/distal | wk16 | ATF3 | 467 | 785 | 0.43 | 0.76 | 0.32 | 4.4981087160334E-24 | 1.5155927507803E-19 |
| 74 | 18 | SSBm/d | S-shaped body medial/distal | wk16 | EEF2 | 1938 | 3214 | 0.43 | 0.99 | 0.92 | 1.8718672427978E-29 | 6.3070694878828E-25 |
| 74 | 18 | SSBm/d | S-shaped body medial/distal | wk16 | CKB | 1152 | 1991 | 0.43 | 0.74 | 0.38 | 1.9662078137207E-16 | 6.6249406075507E-12 |
| 74 | 18 | SSBm/d | S-shaped body medial/distal | wk16 | RPL3 | 6122 | 10332 | 0.43 | 1 | 1 | 6.7128801384657E-62 | 2.2618378338546E-57 |
| 74 | 18 | SSBm/d | S-shaped body medial/distal | wk16 | PTGR1 | 22949 | 18429 | 0.43 | 0.6 | 0.35 | 6.9963654462668E-9 | 0.00023573553734651 |
| 74 | 18 | SSBm/d | S-shaped body medial/distal | wk16 | AKIRIN1 | 79647 | 25744 | 0.42 | 0.72 | 0.37 | 1.3570011787558E-17 | 4.5722797716998E-13 |
| 74 | 18 | SSBm/d | S-shaped body medial/distal | wk16 | ANXA4 | 307 | 542 | 0.42 | 0.61 | 0.22 | 8.221109803656E-25 | 2.7700207372439E-20 |
| 74 | 18 | SSBm/d | S-shaped body medial/distal | wk16 | RPL8 | 6132 | 10368 | 0.42 | 1 | 0.99 | 5.5598273972225E-53 | 1.8733282432201E-48 |
| 74 | 18 | SSBm/d | S-shaped body medial/distal | wk16 | DNAJA1 | 3301 | 5229 | 0.42 | 0.96 | 0.72 | 1.1050942592228E-15 | 3.7235045970254E-11 |
| 74 | 18 | SSBm/d | S-shaped body medial/distal | wk16 | PPP1R15A | 23645 | 14375 | 0.41 | 0.91 | 0.55 | 1.7827827164899E-16 | 6.0069080849411E-12 |
| 74 | 18 | SSBm/d | S-shaped body medial/distal | wk16 | HPN | 3249 | 5155 | 0.41 | 0.42 | 0.06 | 2.0181257200158E-56 | 6.7998728010213E-52 |
| 74 | 18 | SSBm/d | S-shaped body medial/distal | wk16 | PCBD1 | 5092 | 8646 | 0.41 | 0.85 | 0.46 | 8.4092999300653E-20 | 2.8334295184362E-15 |
| 74 | 18 | SSBm/d | S-shaped body medial/distal | wk16 | RPS6 | 6194 | 10429 | 0.4 | 1 | 1 | 8.9432066330072E-51 | 3.0133240429254E-46 |
| 74 | 18 | SSBm/d | S-shaped body medial/distal | wk16 | NOP53 | 29997 | 4333 | 0.4 | 0.95 | 0.72 | 7.0219797013823E-20 | 2.3659858405838E-15 |
| 74 | 18 | SSBm/d | S-shaped body medial/distal | wk16 | DDIT3 | 1649 | 2726 | 0.4 | 0.68 | 0.26 | 3.9758954290594E-25 | 1.3396382058673E-20 |
| 74 | 18 | SSBm/d | S-shaped body medial/distal | wk16 | CKS2 | 1164 | 2000 | 0.4 | 0.76 | 0.38 | 9.2121061607843E-19 | 3.1039270498147E-14 |
| 74 | 18 | SSBm/d | S-shaped body medial/distal | wk16 | LDHB | 3945 | 6541 | 0.4 | 1 | 0.9 | 2.4134021075957E-21 | 8.1317170613329E-17 |
| 74 | 18 | SSBm/d | S-shaped body medial/distal | wk16 | ZFP36 | 7538 | 12862 | 0.4 | 0.7 | 0.26 | 8.8808104537877E-28 | 2.9923002742992E-23 |
| 74 | 18 | SSBm/d | S-shaped body medial/distal | wk16 | CLDN19 | 149461 | 2040 | 0.4 | 0.34 | 0.03 | 1.0576689162064E-70 | 3.5637096462659E-66 |
| 74 | 18 | SSBm/d | S-shaped body medial/distal | wk16 | RPS9 | 6203 | 10442 | 0.4 | 1 | 0.99 | 4.2310508727061E-46 | 1.4256102810496E-41 |
| 74 | 18 | SSBm/d | S-shaped body medial/distal | wk16 | MT1F | 4494 | 7398 | 0.39 | 0.41 | 0.1 | 2.3695227070398E-32 | 7.9838698091E-28 |
| 74 | 18 | SSBm/d | S-shaped body medial/distal | wk16 | SOSTDC1 | 25928 | 21748 | 0.39 | 0.42 | 0.07 | 1.6285232195063E-53 | 5.4871461358044E-49 |
| 74 | 18 | SSBm/d | S-shaped body medial/distal | wk16 | TMEM161B-AS1 | 100505894 | 43839 | 0.39 | 0.43 | 0.08 | 1.8679055024979E-49 | 6.2937208001164E-45 |
| 74 | 18 | SSBm/d | S-shaped body medial/distal | wk16 | RPS28 | 6234 | 10418 | 0.39 | 1 | 0.99 | 1.9022199320125E-40 | 6.409339838923E-36 |
| 74 | 18 | SSBm/d | S-shaped body medial/distal | wk16 | EIF3F | 8665 | 3275 | 0.39 | 0.97 | 0.75 | 1.5204168138454E-19 | 5.1228924125706E-15 |