Marker Genes
Dataset: Single-cell transcriptomics reveals gene expression dynamics of human fetal kidney development
- tissue: Kidney
- ontology: Kidney
- genotype: -
- stage: Fetal
- treatment condition: WT
- cell/nucleus: Cells
- pmid: 30789893
- subset name: wk16
- total genes: Not reported
- clustering: scran
- pseudotime: Monocle 2
- link: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE114530
Rows:100
dataset id | cluster id | cluster name | cell type name | sample id | gene symbol | entrez geneid | species specific geneid |
avg log fc (?)
|
pct 1 | pct 2 | p value | padj |
---|---|---|---|---|---|---|---|---|---|---|---|---|
74 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | wk16 | CCN2 | 1490 | 2500 | 1.27 | 0.8 | 0.54 | 1.73941882665433e-50 | 5.8607977945291e-46 |
74 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | wk16 | PAX8 | 7849 | 8622 | 1.02 | 0.8 | 0.34 | 8.69572367055695e-91 | 2.92993713355746e-86 |
74 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | wk16 | OLFM3 | 118427 | 17990 | 0.95 | 0.42 | 0.11 | 1.57179059757012e-59 | 5.29599123945277e-55 |
74 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | wk16 | PCP4 | 5121 | 8742 | 0.79 | 0.35 | 0.11 | 2.36626364781506e-42 | 7.97288873494807e-38 |
74 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | wk16 | LHX1 | 3975 | 6593 | 0.79 | 0.58 | 0.24 | 7.32359586389905e-48 | 2.46761239038215e-43 |
74 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | wk16 | PLOD2 | 5352 | 9082 | 0.76 | 0.6 | 0.25 | 3.27995079823016e-52 | 1.10514662195567e-47 |
74 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | wk16 | CADM1 | 23705 | 5951 | 0.75 | 0.76 | 0.43 | 3.59878720901826e-46 | 1.21257536220661e-41 |
74 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | wk16 | KLK6 | 5653 | 6367 | 0.73 | 0.51 | 0.17 | 6.49017896042738e-59 | 2.1868008989264e-54 |
74 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | wk16 | IGFBP4 | 3487 | 5473 | 0.71 | 0.78 | 0.43 | 1.94280464404218e-51 | 6.54608596763572e-47 |
74 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | wk16 | IGFBP2 | 3485 | 5471 | 0.68 | 0.94 | 0.64 | 3.01951271684839e-57 | 1.0173946148149e-52 |
74 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | wk16 | BCAM | 4059 | 6722 | 0.68 | 0.79 | 0.46 | 2.72485737611622e-50 | 9.18113444308599e-46 |
74 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | wk16 | CCND1 | 595 | 1582 | 0.68 | 0.59 | 0.36 | 6.32547141593328e-21 | 2.13130433888456e-16 |
74 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | wk16 | IGFBP7 | 3490 | 5476 | 0.67 | 0.72 | 0.57 | 7.80739509978032e-16 | 2.63062370491998e-11 |
74 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | wk16 | WT1 | 7490 | 12796 | 0.66 | 0.74 | 0.35 | 1.85882682972985e-53 | 6.26313112009175e-49 |
74 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | wk16 | HES4 | 57801 | 24149 | 0.65 | 0.82 | 0.48 | 1.5129545423839e-42 | 5.09774903510832e-38 |
74 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | wk16 | MAFB | 9935 | 6408 | 0.65 | 0.63 | 0.33 | 9.26129556146436e-36 | 3.1205009264798e-31 |
74 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | wk16 | EIF3M | 10480 | 24460 | 0.65 | 0.89 | 0.71 | 1.01573584173907e-50 | 3.42242034515561e-46 |
74 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | wk16 | TPM1 | 7168 | 12010 | 0.64 | 0.88 | 0.71 | 1.44300446548186e-33 | 4.86205924599457e-29 |
74 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | wk16 | EFNB2 | 1948 | 3227 | 0.64 | 0.61 | 0.34 | 9.10632172112185e-34 | 3.06828404071479e-29 |
74 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | wk16 | COL13A1 | 1305 | 2190 | 0.63 | 0.39 | 0.15 | 2.18521837683528e-34 | 7.36287479890878e-30 |
74 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | wk16 | PLPP3 | 8613 | 9229 | 0.63 | 0.5 | 0.19 | 4.47775257819747e-42 | 1.50873395369786e-37 |
74 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | wk16 | ID4 | 3400 | 5363 | 0.61 | 0.87 | 0.63 | 1.28670893298517e-35 | 4.33543707880022e-31 |
74 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | wk16 | CTTNBP2 | 83992 | 15679 | 0.59 | 0.42 | 0.15 | 3.13113569579731e-38 | 1.05500486134194e-33 |
74 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | wk16 | ADAMTS1 | 9510 | 217 | 0.59 | 0.38 | 0.15 | 1.98046709852757e-30 | 6.67298584177881e-26 |
74 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | wk16 | CRTAC1 | 55118 | 14882 | 0.59 | 0.26 | 0.07 | 1.942242615038e-37 | 6.54419226710905e-33 |
74 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | wk16 | DSP | 1832 | 3052 | 0.58 | 0.35 | 0.15 | 3.91363547943348e-26 | 1.31866033844032e-21 |
74 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | wk16 | CLDN5 | 7122 | 2047 | 0.58 | 0.49 | 0.19 | 1.28938032709813e-38 | 4.34443807412444e-34 |
74 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | wk16 | FOXC2 | 2303 | 3801 | 0.58 | 0.62 | 0.32 | 4.48811392892027e-32 | 1.51222510721039e-27 |
74 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | wk16 | EMID1 | 129080 | 18036 | 0.57 | 0.45 | 0.22 | 2.3861293367989e-28 | 8.03982418741021e-24 |
74 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | wk16 | TNNI1 | 7135 | 11945 | 0.57 | 0.32 | 0.12 | 4.08783524109564e-26 | 1.37735520613477e-21 |
74 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | wk16 | PCBD1 | 5092 | 8646 | 0.56 | 0.71 | 0.45 | 1.25777119329894e-31 | 4.23793425870146e-27 |
74 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | wk16 | KRT19 | 3880 | 6436 | 0.54 | 0.63 | 0.29 | 1.86871471769456e-41 | 6.29644736980006e-37 |
74 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | wk16 | ANK3 | 288 | 494 | 0.53 | 0.38 | 0.17 | 7.56963016486575e-25 | 2.55051118774987e-20 |
74 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | wk16 | LYPD1 | 116372 | 28431 | 0.52 | 0.62 | 0.34 | 3.32590374262585e-25 | 1.12063000704035e-20 |
74 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | wk16 | JAG1 | 182 | 6188 | 0.52 | 0.44 | 0.2 | 1.49809324309289e-29 | 5.04767537327718e-25 |
74 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | wk16 | SLC16A1 | 6566 | 10922 | 0.52 | 0.41 | 0.21 | 1.70030321015659e-21 | 5.7290016363016e-17 |
74 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | wk16 | LRRTM1 | 347730 | 19408 | 0.51 | 0.31 | 0.08 | 1.03010127989277e-42 | 3.4708232524707e-38 |
74 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | wk16 | PCDH9-AS1 | 100874065 | 39897 | 0.51 | 0.27 | 0.07 | 1.42396406801695e-41 | 4.79790453077632e-37 |
74 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | wk16 | AKAP12 | 9590 | 370 | 0.51 | 0.77 | 0.52 | 3.042154880315e-26 | 1.02502366537333e-21 |
74 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | wk16 | BMP7 | 655 | 1074 | 0.5 | 0.39 | 0.17 | 3.05532567457057e-26 | 1.02946143278981e-21 |
74 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | wk16 | NRGN | 4900 | 8000 | 0.5 | 0.26 | 0.07 | 2.43111324358499e-32 | 8.19139296293526e-28 |
74 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | wk16 | FBXO17 | 115290 | 18754 | 0.49 | 0.55 | 0.37 | 3.3429455469753e-18 | 1.12637207259786e-13 |
74 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | wk16 | CDH6 | 1004 | 1765 | 0.49 | 0.32 | 0.13 | 2.83802890804182e-24 | 9.56245460275609e-20 |
74 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | wk16 | WDR86 | 349136 | 28020 | 0.48 | 0.29 | 0.1 | 4.15693946058874e-31 | 1.40063918185077e-26 |
74 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | wk16 | DSC2 | 1824 | 3036 | 0.48 | 0.35 | 0.11 | 2.66075933509208e-38 | 8.96516250365926e-34 |
74 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | wk16 | TSC22D3 | 1831 | 3051 | 0.47 | 0.59 | 0.38 | 4.43180350983407e-20 | 1.49325187460349e-15 |
74 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | wk16 | SQOR | 58472 | 20390 | 0.47 | 0.26 | 0.06 | 9.18103101280994e-38 | 3.09345658945618e-33 |
74 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | wk16 | ERP27 | 121506 | 26495 | 0.47 | 0.17 | 0.03 | 5.38687674906081e-31 | 1.81505425182855e-26 |
74 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | wk16 | C1QTNF12 | 388581 | 32308 | 0.46 | 0.25 | 0.1 | 4.38550546809149e-18 | 1.47765221241875e-13 |
74 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | wk16 | RASSF7 | 8045 | 1166 | 0.46 | 0.37 | 0.18 | 1.2003023610016e-19 | 4.04429877515879e-15 |
74 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | wk16 | LAMP5 | 24141 | 16097 | 0.46 | 0.17 | 0.05 | 5.93435412984926e-20 | 1.99952128051141e-15 |
74 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | wk16 | PRDX6 | 9588 | 16753 | 0.46 | 0.9 | 0.76 | 4.80952296933619e-32 | 1.62052066928814e-27 |
74 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | wk16 | KAAG1 | 353219 | 21031 | 0.46 | 0.13 | 0.02 | 6.34661476023897e-37 | 2.13842837731492e-32 |
74 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | wk16 | FBLN2 | 2199 | 3601 | 0.45 | 0.24 | 0.06 | 6.95646058932362e-34 | 2.3439098309667e-29 |
74 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | wk16 | PPA1 | 5464 | 9226 | 0.45 | 0.63 | 0.43 | 1.21951035437786e-19 | 4.10901818804075e-15 |
74 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | wk16 | CITED2 | 10370 | 1987 | 0.45 | 0.75 | 0.53 | 4.25571230016134e-23 | 1.43391970241636e-18 |
74 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | wk16 | RGS10 | 6001 | 9992 | 0.44 | 0.36 | 0.15 | 1.64804866082651e-25 | 5.55293515778885e-21 |
74 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | wk16 | TSPAN12 | 23554 | 21641 | 0.44 | 0.45 | 0.23 | 1.1444269995205e-21 | 3.85603233218438e-17 |
74 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | wk16 | NDNF | 79625 | 26256 | 0.44 | 0.23 | 0.05 | 3.76932516657916e-35 | 1.27003642162718e-30 |
74 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | wk16 | PMP22 | 5376 | 9118 | 0.44 | 0.34 | 0.17 | 1.89151285656788e-14 | 6.37326341891981e-10 |
74 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | wk16 | CAV1 | 857 | 1527 | 0.43 | 0.2 | 0.04 | 1.27725884204185e-32 | 4.3035959423758e-28 |
74 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | wk16 | HEY1 | 23462 | 4880 | 0.43 | 0.38 | 0.22 | 3.138694132344e-14 | 1.05755160095199e-09 |
74 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | wk16 | GLIPR2 | 152007 | 18007 | 0.43 | 0.41 | 0.22 | 1.4348717306877e-18 | 4.83465680937915e-14 |
74 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | wk16 | CLDN1 | 9076 | 2032 | 0.43 | 0.26 | 0.06 | 1.57018452982736e-37 | 5.29057975480031e-33 |
74 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | wk16 | QPRT | 23475 | 9755 | 0.43 | 0.69 | 0.57 | 5.64758744723167e-12 | 1.90289811447024e-07 |
74 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | wk16 | ZNF770 | 54989 | 26061 | 0.42 | 0.35 | 0.17 | 3.97133973254923e-20 | 1.33810320948514e-15 |
74 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | wk16 | ATP5F1A | 498 | 823 | 0.42 | 0.91 | 0.76 | 3.16439376711236e-31 | 1.06621083589084e-26 |
74 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | wk16 | GRIN2A | 2903 | 4585 | 0.42 | 0.2 | 0.08 | 7.21885404741083e-16 | 2.4323206827346e-11 |
74 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | wk16 | OSR2 | 116039 | 15830 | 0.41 | 0.29 | 0.12 | 3.30976055157779e-19 | 1.11519072024862e-14 |
74 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | wk16 | SNCA | 6622 | 11138 | 0.41 | 0.36 | 0.17 | 1.94069178237745e-21 | 6.53896689154258e-17 |
74 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | wk16 | WT1-AS | 51352 | 18135 | 0.41 | 0.38 | 0.15 | 1.66934001427839e-26 | 5.62467424410961e-22 |
74 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | wk16 | SERINC5 | 256987 | 18825 | 0.41 | 0.23 | 0.1 | 3.7884778611011e-15 | 1.2764897305194e-10 |
74 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | wk16 | EFNB1 | 1947 | 3226 | 0.4 | 0.5 | 0.29 | 5.97937061313141e-18 | 2.0146891343885e-13 |
74 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | wk16 | CCDC198 | 55195 | 20189 | 0.4 | 0.26 | 0.15 | 5.71702880898737e-09 | 0.000192629568690021 |
74 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | wk16 | SNHG19 | 100507303 | 49574 | 0.4 | 0.45 | 0.28 | 2.66357273018511e-15 | 8.97464195708572e-11 |
74 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | wk16 | C17orf58 | 284018 | 27568 | 0.4 | 0.33 | 0.15 | 5.26671410778536e-17 | 1.7745666514772e-12 |
74 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | wk16 | MGST1 | 4257 | 7061 | 0.4 | 0.33 | 0.18 | 1.01805724568354e-12 | 3.43024208360613e-08 |
74 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | wk16 | FRMD4B | 23150 | 24886 | 0.4 | 0.3 | 0.17 | 2.8930627240897e-11 | 9.74788554254783e-07 |
74 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | wk16 | LHX1-DT | 102723471 | 53778 | 0.4 | 0.29 | 0.16 | 7.7055964745431e-13 | 2.59632367613255e-08 |
74 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | wk16 | RASSF10 | 644943 | 33984 | 0.4 | 0.3 | 0.12 | 2.75902295321137e-22 | 9.2962519385504e-18 |
74 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | wk16 | SFRP2 | 6423 | 10777 | 0.4 | 0.22 | 0.08 | 1.14724675392504e-16 | 3.86553321267502e-12 |
74 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | wk16 | TTYH1 | 57348 | 13476 | 0.4 | 0.19 | 0.06 | 6.06994678186446e-21 | 2.04520786868141e-16 |
74 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | wk16 | FOXP1 | 27086 | 3823 | 0.39 | 0.48 | 0.31 | 4.69308650919322e-13 | 1.58128856840756e-08 |
74 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | wk16 | KAZN | 23254 | 29173 | 0.39 | 0.28 | 0.12 | 2.75914651252868e-19 | 9.29666825931412e-15 |
74 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | wk16 | CRB2 | 286204 | 18688 | 0.39 | 0.29 | 0.09 | 3.04625961426384e-28 | 1.02640671443006e-23 |
74 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | wk16 | EMX2 | 2018 | 3341 | 0.39 | 0.37 | 0.21 | 6.68299703398036e-14 | 2.25176902062934e-09 |
74 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | wk16 | DCDC2 | 51473 | 18141 | 0.39 | 0.31 | 0.17 | 1.03416694527088e-12 | 3.48452210539571e-08 |
74 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | wk16 | HIPK2 | 28996 | 14402 | 0.39 | 0.44 | 0.28 | 4.43750763618808e-13 | 1.49517382293721e-08 |
74 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | wk16 | BEX1 | 55859 | 1036 | 0.39 | 0.52 | 0.38 | 3.05816912079849e-11 | 1.03041950356184e-06 |
74 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | wk16 | ID1 | 3397 | 5360 | 0.38 | 0.93 | 0.74 | 3.77158933030697e-21 | 1.27079930895363e-16 |
74 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | wk16 | APELA | 100506013 | 48925 | 0.38 | 0.17 | 0.03 | 6.47924437061298e-40 | 2.18311659823434e-35 |
74 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | wk16 | SULF1 | 23213 | 20391 | 0.37 | 0.18 | 0.04 | 2.04418409926796e-30 | 6.88767390407346e-26 |
74 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | wk16 | EIF3A | 8661 | 3271 | 0.37 | 0.73 | 0.55 | 1.20009934199476e-17 | 4.04361472291714e-13 |
74 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | wk16 | SYTL2 | 54843 | 15585 | 0.37 | 0.18 | 0.08 | 2.93658352841193e-12 | 9.89452454063114e-08 |
74 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | wk16 | IL1R1 | 3554 | 5993 | 0.37 | 0.2 | 0.06 | 2.18730690599422e-24 | 7.36991188905692e-20 |
74 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | wk16 | RFLNB | 359845 | 28705 | 0.37 | 0.21 | 0.1 | 1.48929561018413e-10 | 5.01803262895441e-06 |
74 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | wk16 | CXXC5 | 51523 | 26943 | 0.36 | 0.76 | 0.56 | 1.57158083260718e-16 | 5.29528445738663e-12 |
74 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | wk16 | CANX | 821 | 1473 | 0.36 | 0.59 | 0.43 | 1.72170922392557e-11 | 5.80112705909483e-07 |
74 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | wk16 | FYN | 2534 | 4037 | 0.36 | 0.36 | 0.22 | 1.68073464176513e-10 | 5.66306730196342e-06 |
74 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | wk16 | ITM2B | 9445 | 6174 | 0.35 | 0.95 | 0.9 | 9.29639571246668e-14 | 3.13232757135852e-09 |