Marker Genes
Dataset: Single-cell transcriptomics reveals gene expression dynamics of human fetal kidney development
- tissue: Kidney
- ontology: Kidney
- genotype: -
- stage: Fetal
- treatment condition: WT
- cell/nucleus: Cells
- pmid: 30789893
- subset name: wk16
- total genes: Not reported
- clustering: scran
- pseudotime: Monocle 2
- link: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE114530
Rows:100
| dataset id | cluster id | cluster name | cell type name | sample id | gene symbol | entrez geneid | species specific geneid |
avg log fc (?)
|
pct 1 | pct 2 | p value | padj |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 74 | 14 | Prolif | Proliferating cells | wk16 | TUBA1B | 10376 | 18809 | 1.17 | 0.88 | 0.79 | 2.0467359580373E-18 | 6.8962721370109E-14 |
| 74 | 14 | Prolif | Proliferating cells | wk16 | UBE2C | 11065 | 15937 | 1.02 | 0.32 | 0.15 | 5.7881985603342E-7 | 0.01 |
| 74 | 14 | Prolif | Proliferating cells | wk16 | TYMS | 7298 | 12441 | 1.01 | 0.54 | 0.24 | 1.1008840289142E-14 | 3.7093186470235E-10 |
| 74 | 14 | Prolif | Proliferating cells | wk16 | PCLAF | 9768 | 28961 | 0.98 | 0.6 | 0.28 | 2.3742992049806E-15 | 7.9999637412616E-11 |
| 74 | 14 | Prolif | Proliferating cells | wk16 | TUBB | 203068 | 20778 | 0.95 | 0.95 | 0.88 | 1.9012660858448E-21 | 6.4061259496455E-17 |
| 74 | 14 | Prolif | Proliferating cells | wk16 | PCNA | 5111 | 8729 | 0.9 | 0.52 | 0.32 | 6.1133651985339E-9 | 0.0002059837269994 |
| 74 | 14 | Prolif | Proliferating cells | wk16 | CDK1 | 983 | 1722 | 0.9 | 0.35 | 0.11 | 2.9127790200902E-14 | 9.8143176302917E-10 |
| 74 | 14 | Prolif | Proliferating cells | wk16 | H2AFZ | 3015 | 4741 | 0.9 | 0.88 | 0.82 | 5.233931882106E-14 | 1.7635210083568E-9 |
| 74 | 14 | Prolif | Proliferating cells | wk16 | TMSB15A | 11013 | 30744 | 0.9 | 0.57 | 0.31 | 7.3230771411596E-13 | 2.4674376119423E-8 |
| 74 | 14 | Prolif | Proliferating cells | wk16 | HMGB2 | 3148 | 5000 | 0.87 | 0.68 | 0.53 | 3.0806151748984E-8 | 0.0010379824770303 |
| 74 | 14 | Prolif | Proliferating cells | wk16 | MAD2L1 | 4085 | 6763 | 0.86 | 0.48 | 0.21 | 6.2293509971318E-13 | 2.0989175249736E-8 |
| 74 | 14 | Prolif | Proliferating cells | wk16 | RANBP1 | 5902 | 9847 | 0.85 | 0.85 | 0.69 | 2.2031517865043E-18 | 7.4232996294474E-14 |
| 74 | 14 | Prolif | Proliferating cells | wk16 | STMN1 | 3925 | 6510 | 0.83 | 1 | 0.92 | 6.1558913226324E-20 | 2.0741660222478E-15 |
| 74 | 14 | Prolif | Proliferating cells | wk16 | UBE2T | 29089 | 25009 | 0.82 | 0.43 | 0.17 | 1.3523896342428E-13 | 4.5567416336177E-9 |
| 74 | 14 | Prolif | Proliferating cells | wk16 | ENO1 | 2023 | 3350 | 0.78 | 0.88 | 0.67 | 1.6865060945594E-19 | 5.6825136350086E-15 |
| 74 | 14 | Prolif | Proliferating cells | wk16 | HMGN2 | 3151 | 4986 | 0.76 | 0.95 | 0.9 | 2.2615619965771E-18 | 7.6201069912668E-14 |
| 74 | 14 | Prolif | Proliferating cells | wk16 | SPC25 | 57405 | 24031 | 0.75 | 0.29 | 0.07 | 2.4664314125227E-17 | 8.3103940013539E-13 |
| 74 | 14 | Prolif | Proliferating cells | wk16 | PTTG1 | 9232 | 9690 | 0.74 | 0.48 | 0.27 | 5.2949030937398E-8 | 0.0017840646484047 |
| 74 | 14 | Prolif | Proliferating cells | wk16 | MCM7 | 4176 | 6950 | 0.72 | 0.47 | 0.28 | 9.7060766040741E-8 | 0.0032703654509767 |
| 74 | 14 | Prolif | Proliferating cells | wk16 | NUSAP1 | 51203 | 18538 | 0.72 | 0.34 | 0.15 | 2.2483611813325E-7 | 0.0075756281643817 |
| 74 | 14 | Prolif | Proliferating cells | wk16 | DUT | 1854 | 3078 | 0.7 | 0.74 | 0.58 | 1.0128950730243E-9 | 3.4128486590481E-5 |
| 74 | 14 | Prolif | Proliferating cells | wk16 | RPA3 | 6119 | 10291 | 0.7 | 0.48 | 0.33 | 1.460893879751E-6 | 0.04 |
| 74 | 14 | Prolif | Proliferating cells | wk16 | CKS1B | 1163 | 19083 | 0.7 | 0.52 | 0.35 | 6.666847711329E-8 | 0.0022463276678552 |
| 74 | 14 | Prolif | Proliferating cells | wk16 | POLR2I | 5438 | 9196 | 0.69 | 0.55 | 0.41 | 1.6044241366842E-7 | 0.0054059466861437 |
| 74 | 14 | Prolif | Proliferating cells | wk16 | GAPDH | 2597 | 4141 | 0.69 | 1 | 0.97 | 9.9945862830213E-29 | 3.3675759022012E-24 |
| 74 | 14 | Prolif | Proliferating cells | wk16 | SNRPD1 | 6632 | 11158 | 0.68 | 0.8 | 0.63 | 2.4145341863937E-13 | 8.1355314876348E-9 |
| 74 | 14 | Prolif | Proliferating cells | wk16 | SNRPD2 | 6633 | 11159 | 0.67 | 0.89 | 0.81 | 2.794088595106E-17 | 9.4144021123503E-13 |
| 74 | 14 | Prolif | Proliferating cells | wk16 | RAN | 5901 | 9846 | 0.66 | 0.9 | 0.78 | 7.8367344857375E-15 | 2.6405093176244E-10 |
| 74 | 14 | Prolif | Proliferating cells | wk16 | LDHA | 3939 | 6535 | 0.66 | 0.65 | 0.52 | 2.5955994491534E-8 | 0.00087456127839773 |
| 74 | 14 | Prolif | Proliferating cells | wk16 | MIF | 4282 | 7097 | 0.65 | 0.81 | 0.68 | 6.5161164407752E-13 | 2.1955402735548E-8 |
| 74 | 14 | Prolif | Proliferating cells | wk16 | TK1 | 7083 | 11830 | 0.65 | 0.32 | 0.14 | 4.3266686563011E-8 | 0.0014578277370541 |
| 74 | 14 | Prolif | Proliferating cells | wk16 | HMGB1 | 3146 | 4983 | 0.61 | 0.96 | 0.96 | 2.24199297136E-13 | 7.5541711177004E-9 |
| 74 | 14 | Prolif | Proliferating cells | wk16 | PTMA | 5757 | 9623 | 0.6 | 1 | 1 | 4.7576506962335E-28 | 1.6030428255889E-23 |
| 74 | 14 | Prolif | Proliferating cells | wk16 | LSM3 | 27258 | 17874 | 0.59 | 0.7 | 0.57 | 3.3131199900228E-10 | 1.1163226494383E-5 |
| 74 | 14 | Prolif | Proliferating cells | wk16 | PRDX2 | 7001 | 9353 | 0.59 | 0.9 | 0.8 | 8.0077610361313E-15 | 2.6981350035141E-10 |
| 74 | 14 | Prolif | Proliferating cells | wk16 | LSM4 | 25804 | 17259 | 0.59 | 0.64 | 0.51 | 1.5796099383465E-7 | 0.0053223377262647 |
| 74 | 14 | Prolif | Proliferating cells | wk16 | NME1 | 4830 | 7849 | 0.59 | 0.61 | 0.47 | 6.6168688386752E-8 | 0.0022294877865032 |
| 74 | 14 | Prolif | Proliferating cells | wk16 | RRM2 | 6241 | 10452 | 0.58 | 0.24 | 0.08 | 1.1044893134513E-8 | 0.00037214662927427 |
| 74 | 14 | Prolif | Proliferating cells | wk16 | YBX1 | 4904 | 8014 | 0.58 | 1 | 0.92 | 1.501077068873E-18 | 5.0577290758608E-14 |
| 74 | 14 | Prolif | Proliferating cells | wk16 | GSTO1 | 9446 | 13312 | 0.57 | 0.55 | 0.36 | 6.8315955696311E-9 | 0.00023018378112315 |
| 74 | 14 | Prolif | Proliferating cells | wk16 | LDHB | 3945 | 6541 | 0.57 | 0.98 | 0.9 | 1.8538747032402E-14 | 6.2464454250975E-10 |
| 74 | 14 | Prolif | Proliferating cells | wk16 | CENPV | 201161 | 29920 | 0.57 | 0.52 | 0.36 | 7.6560136538041E-7 | 0.02 |
| 74 | 14 | Prolif | Proliferating cells | wk16 | RBX1 | 9978 | 9928 | 0.55 | 0.72 | 0.62 | 2.7317781592457E-8 | 0.00092044533297625 |
| 74 | 14 | Prolif | Proliferating cells | wk16 | CCT8 | 10694 | 1623 | 0.54 | 0.64 | 0.56 | 2.3850065924629E-7 | 0.0080360412126445 |
| 74 | 14 | Prolif | Proliferating cells | wk16 | RPL35 | 11224 | 10344 | 0.54 | 1 | 0.99 | 1.7278889546393E-26 | 5.8219490437617E-22 |
| 74 | 14 | Prolif | Proliferating cells | wk16 | RPS3A | 6189 | 10421 | 0.54 | 1 | 1 | 2.8862276200426E-36 | 9.7248553429716E-32 |
| 74 | 14 | Prolif | Proliferating cells | wk16 | AURKB | 9212 | 11390 | 0.54 | 0.24 | 0.1 | 1.3520054475864E-6 | 0.04 |
| 74 | 14 | Prolif | Proliferating cells | wk16 | RPL18A | 6142 | 10311 | 0.53 | 1 | 0.99 | 1.3914614185819E-29 | 4.6883901037699E-25 |
| 74 | 14 | Prolif | Proliferating cells | wk16 | PIMREG | 54478 | 25483 | 0.52 | 0.24 | 0.09 | 9.896182694785E-8 | 0.0033344197971808 |
| 74 | 14 | Prolif | Proliferating cells | wk16 | ERH | 2079 | 3447 | 0.52 | 0.8 | 0.78 | 9.9198547742009E-7 | 0.03 |
| 74 | 14 | Prolif | Proliferating cells | wk16 | LSM5 | 23658 | 17162 | 0.52 | 0.67 | 0.53 | 1.2790627497688E-7 | 0.004309674029071 |
| 74 | 14 | Prolif | Proliferating cells | wk16 | RPL22 | 6146 | 10315 | 0.52 | 1 | 0.98 | 6.6847291358774E-20 | 2.2523526350425E-15 |
| 74 | 14 | Prolif | Proliferating cells | wk16 | PARK7 | 11315 | 16369 | 0.51 | 0.8 | 0.77 | 2.0531865015275E-8 | 0.00069180065982469 |
| 74 | 14 | Prolif | Proliferating cells | wk16 | TPI1 | 7167 | 12009 | 0.51 | 0.87 | 0.81 | 2.7218293373683E-10 | 9.1709317693287E-6 |
| 74 | 14 | Prolif | Proliferating cells | wk16 | PKM | 5315 | 9021 | 0.51 | 0.75 | 0.66 | 6.5618372158413E-8 | 0.0022109454315056 |
| 74 | 14 | Prolif | Proliferating cells | wk16 | PSMA4 | 5685 | 9533 | 0.5 | 0.83 | 0.73 | 9.3238091298557E-9 | 0.00031415642482136 |
| 74 | 14 | Prolif | Proliferating cells | wk16 | EEF1B2 | 1933 | 3208 | 0.5 | 0.94 | 0.87 | 8.7432348642084E-14 | 2.9459455551464E-9 |
| 74 | 14 | Prolif | Proliferating cells | wk16 | SNRPG | 6637 | 11163 | 0.5 | 0.75 | 0.65 | 8.6257935623854E-9 | 0.00029063748829101 |
| 74 | 14 | Prolif | Proliferating cells | wk16 | SRP9 | 6726 | 11304 | 0.48 | 0.77 | 0.7 | 9.0866171338884E-8 | 0.0030616447770924 |
| 74 | 14 | Prolif | Proliferating cells | wk16 | TXN | 7295 | 12435 | 0.48 | 0.82 | 0.79 | 1.027203255473E-7 | 0.0034610586489908 |
| 74 | 14 | Prolif | Proliferating cells | wk16 | RPL31 | 6160 | 10334 | 0.48 | 1 | 0.99 | 5.3730531424543E-23 | 1.8103965258185E-18 |
| 74 | 14 | Prolif | Proliferating cells | wk16 | SEC61G | 23480 | 18277 | 0.48 | 0.76 | 0.69 | 1.5600240914127E-9 | 5.2563451736058E-5 |
| 74 | 14 | Prolif | Proliferating cells | wk16 | UBA52 | 7311 | 12458 | 0.48 | 0.98 | 0.96 | 9.0742440931965E-14 | 3.0574758047616E-9 |
| 74 | 14 | Prolif | Proliferating cells | wk16 | RPL39 | 6170 | 10350 | 0.48 | 1 | 0.99 | 2.7132986283114E-25 | 9.1421883982325E-21 |
| 74 | 14 | Prolif | Proliferating cells | wk16 | PPIA | 5478 | 9253 | 0.47 | 0.97 | 0.95 | 4.8554549928089E-14 | 1.6359970052771E-9 |
| 74 | 14 | Prolif | Proliferating cells | wk16 | RPS17 | 6218 | 10397 | 0.47 | 1 | 0.99 | 1.1326549576474E-28 | 3.8163676142973E-24 |
| 74 | 14 | Prolif | Proliferating cells | wk16 | RPSA | 3921 | 6502 | 0.47 | 1 | 0.98 | 2.6639618375566E-20 | 8.9759530154631E-16 |
| 74 | 14 | Prolif | Proliferating cells | wk16 | RPL32 | 6161 | 10336 | 0.47 | 1 | 0.99 | 6.4810533000849E-29 | 2.1837260989306E-24 |
| 74 | 14 | Prolif | Proliferating cells | wk16 | SNRPE | 6635 | 11161 | 0.47 | 0.82 | 0.82 | 3.6122647189831E-8 | 0.0012171164744142 |
| 74 | 14 | Prolif | Proliferating cells | wk16 | RPLP0 | 6175 | 10371 | 0.47 | 1 | 0.99 | 9.9624217134533E-24 | 3.3567383721309E-19 |
| 74 | 14 | Prolif | Proliferating cells | wk16 | RPS5 | 6193 | 10426 | 0.47 | 1 | 0.99 | 4.6509052554194E-26 | 1.567076016761E-21 |
| 74 | 14 | Prolif | Proliferating cells | wk16 | PTGES3 | 10728 | 16049 | 0.46 | 0.77 | 0.71 | 4.5420392937775E-7 | 0.01 |
| 74 | 14 | Prolif | Proliferating cells | wk16 | RPL23A | 6147 | 10317 | 0.46 | 1 | 0.99 | 1.0662835387169E-21 | 3.5927357553528E-17 |
| 74 | 14 | Prolif | Proliferating cells | wk16 | RPS6 | 6194 | 10429 | 0.46 | 1 | 1 | 1.6794180542497E-25 | 5.6586311919889E-21 |
| 74 | 14 | Prolif | Proliferating cells | wk16 | UQCRQ | 27089 | 29594 | 0.46 | 0.78 | 0.73 | 4.7013332440615E-7 | 0.01 |
| 74 | 14 | Prolif | Proliferating cells | wk16 | EEF1D | 1936 | 3211 | 0.45 | 0.91 | 0.87 | 1.1338388548134E-10 | 3.8203566374084E-6 |
| 74 | 14 | Prolif | Proliferating cells | wk16 | RPS24 | 6229 | 10411 | 0.45 | 1 | 0.99 | 5.2830356977904E-19 | 1.7800660480135E-14 |
| 74 | 14 | Prolif | Proliferating cells | wk16 | RPL26 | 6154 | 10327 | 0.45 | 1 | 0.99 | 1.1401146234589E-26 | 3.8415022122825E-22 |
| 74 | 14 | Prolif | Proliferating cells | wk16 | RPS15A | 6210 | 10389 | 0.45 | 1 | 0.99 | 1.1730393849041E-23 | 3.9524389034958E-19 |
| 74 | 14 | Prolif | Proliferating cells | wk16 | SNRPF | 6636 | 11162 | 0.44 | 0.78 | 0.66 | 2.5622550362211E-7 | 0.0086332621190434 |
| 74 | 14 | Prolif | Proliferating cells | wk16 | NDUFS5 | 4725 | 7712 | 0.44 | 0.84 | 0.81 | 1.5730093777081E-8 | 0.00053000977972496 |
| 74 | 14 | Prolif | Proliferating cells | wk16 | PFN1 | 5216 | 8881 | 0.44 | 0.82 | 0.79 | 8.7790478411409E-7 | 0.02 |
| 74 | 14 | Prolif | Proliferating cells | wk16 | CHCHD2 | 51142 | 21645 | 0.44 | 0.97 | 0.92 | 3.4554402619943E-11 | 1.1642760418764E-6 |
| 74 | 14 | Prolif | Proliferating cells | wk16 | RPS14 | 6208 | 10387 | 0.43 | 1 | 1 | 1.5793987673081E-26 | 5.321626206568E-22 |
| 74 | 14 | Prolif | Proliferating cells | wk16 | TMSB10 | 9168 | 11879 | 0.43 | 0.98 | 0.98 | 1.7959580923608E-17 | 6.0513011964004E-13 |
| 74 | 14 | Prolif | Proliferating cells | wk16 | RPL12 | 6136 | 10302 | 0.43 | 1 | 0.99 | 3.7911444975146E-17 | 1.2773882269926E-12 |
| 74 | 14 | Prolif | Proliferating cells | wk16 | RPS15 | 6209 | 10388 | 0.42 | 1 | 0.99 | 1.1318273912699E-22 | 3.8135792121449E-18 |
| 74 | 14 | Prolif | Proliferating cells | wk16 | YWHAQ | 10971 | 12854 | 0.42 | 0.82 | 0.73 | 6.006564880913E-9 | 0.00020238519709748 |
| 74 | 14 | Prolif | Proliferating cells | wk16 | RPL7 | 6129 | 10363 | 0.42 | 1 | 1 | 2.6093141551188E-21 | 8.7918231142572E-17 |
| 74 | 14 | Prolif | Proliferating cells | wk16 | RPLP2 | 6181 | 10377 | 0.42 | 1 | 0.99 | 8.4608923589637E-22 | 2.8508130714292E-17 |
| 74 | 14 | Prolif | Proliferating cells | wk16 | SRSF3 | 6428 | 10785 | 0.41 | 0.9 | 0.85 | 9.4728603339347E-7 | 0.03 |
| 74 | 14 | Prolif | Proliferating cells | wk16 | RPL6 | 6128 | 10362 | 0.41 | 1 | 0.99 | 5.2539963525204E-17 | 1.7702815310182E-12 |
| 74 | 14 | Prolif | Proliferating cells | wk16 | RPL37 | 6167 | 10347 | 0.41 | 1 | 0.98 | 2.3118967354708E-18 | 7.7897048604952E-14 |
| 74 | 14 | Prolif | Proliferating cells | wk16 | RPS10 | 6204 | 10383 | 0.4 | 0.97 | 0.93 | 1.6809700547508E-12 | 5.6638605024773E-8 |
| 74 | 14 | Prolif | Proliferating cells | wk16 | NPM1 | 4869 | 7910 | 0.39 | 1 | 0.97 | 1.8918440390384E-12 | 6.374379305136E-8 |
| 74 | 14 | Prolif | Proliferating cells | wk16 | ATP5MPL | 9556 | 1188 | 0.39 | 0.81 | 0.77 | 2.8290801043075E-7 | 0.0095323025034535 |
| 74 | 14 | Prolif | Proliferating cells | wk16 | RPL8 | 6132 | 10368 | 0.38 | 1 | 0.99 | 2.4215943309607E-21 | 8.159319938739E-17 |
| 74 | 14 | Prolif | Proliferating cells | wk16 | ATP5F1E | 514 | 838 | 0.38 | 0.95 | 0.9 | 1.699839039587E-8 | 0.00057274376599845 |
| 74 | 14 | Prolif | Proliferating cells | wk16 | RPL36 | 25873 | 13631 | 0.38 | 0.97 | 0.97 | 2.8701548052164E-10 | 9.6706996006963E-6 |
| 74 | 14 | Prolif | Proliferating cells | wk16 | RPL19 | 6143 | 10312 | 0.37 | 1 | 0.99 | 1.2888414057898E-21 | 4.3426222326682E-17 |