Marker Genes
Dataset: Single-cell transcriptomics reveals gene expression dynamics of human fetal kidney development
- tissue: Kidney
- ontology: Kidney
- genotype: -
- stage: Fetal
- treatment condition: WT
- cell/nucleus: Cells
- pmid: 30789893
- subset name: wk16
- total genes: Not reported
- clustering: scran
- pseudotime: Monocle 2
- link: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE114530
Rows:100
dataset id | cluster id | cluster name | cell type name | sample id | gene symbol | entrez geneid | species specific geneid |
avg log fc (?)
|
pct 1 | pct 2 | p value | padj |
---|---|---|---|---|---|---|---|---|---|---|---|---|
74 | 14 | Prolif | Proliferating cells | wk16 | TUBA1B | 10376 | 18809 | 1.17 | 0.88 | 0.79 | 2.0467359580373e-18 | 6.89627213701089e-14 |
74 | 14 | Prolif | Proliferating cells | wk16 | UBE2C | 11065 | 15937 | 1.02 | 0.32 | 0.15 | 5.78819856033422e-07 | 0.01 |
74 | 14 | Prolif | Proliferating cells | wk16 | TYMS | 7298 | 12441 | 1.01 | 0.54 | 0.24 | 1.10088402891418e-14 | 3.70931864702345e-10 |
74 | 14 | Prolif | Proliferating cells | wk16 | PCLAF | 9768 | 28961 | 0.98 | 0.6 | 0.28 | 2.3742992049806e-15 | 7.99996374126162e-11 |
74 | 14 | Prolif | Proliferating cells | wk16 | TUBB | 203068 | 20778 | 0.95 | 0.95 | 0.88 | 1.90126608584481e-21 | 6.40612594964552e-17 |
74 | 14 | Prolif | Proliferating cells | wk16 | PCNA | 5111 | 8729 | 0.9 | 0.52 | 0.32 | 6.11336519853387e-09 | 0.0002059837269994 |
74 | 14 | Prolif | Proliferating cells | wk16 | CDK1 | 983 | 1722 | 0.9 | 0.35 | 0.11 | 2.91277902009015e-14 | 9.81431763029173e-10 |
74 | 14 | Prolif | Proliferating cells | wk16 | H2AFZ | 3015 | 4741 | 0.9 | 0.88 | 0.82 | 5.23393188210598e-14 | 1.76352100835679e-09 |
74 | 14 | Prolif | Proliferating cells | wk16 | TMSB15A | 11013 | 30744 | 0.9 | 0.57 | 0.31 | 7.32307714115962e-13 | 2.46743761194232e-08 |
74 | 14 | Prolif | Proliferating cells | wk16 | HMGB2 | 3148 | 5000 | 0.87 | 0.68 | 0.53 | 3.08061517489838e-08 | 0.00103798247703026 |
74 | 14 | Prolif | Proliferating cells | wk16 | MAD2L1 | 4085 | 6763 | 0.86 | 0.48 | 0.21 | 6.2293509971318e-13 | 2.09891752497359e-08 |
74 | 14 | Prolif | Proliferating cells | wk16 | RANBP1 | 5902 | 9847 | 0.85 | 0.85 | 0.69 | 2.20315178650426e-18 | 7.42329962944744e-14 |
74 | 14 | Prolif | Proliferating cells | wk16 | STMN1 | 3925 | 6510 | 0.83 | 1 | 0.92 | 6.15589132263241e-20 | 2.07416602224776e-15 |
74 | 14 | Prolif | Proliferating cells | wk16 | UBE2T | 29089 | 25009 | 0.82 | 0.43 | 0.17 | 1.35238963424279e-13 | 4.55674163361765e-09 |
74 | 14 | Prolif | Proliferating cells | wk16 | ENO1 | 2023 | 3350 | 0.78 | 0.88 | 0.67 | 1.68650609455944e-19 | 5.68251363500857e-15 |
74 | 14 | Prolif | Proliferating cells | wk16 | HMGN2 | 3151 | 4986 | 0.76 | 0.95 | 0.9 | 2.26156199657707e-18 | 7.62010699126677e-14 |
74 | 14 | Prolif | Proliferating cells | wk16 | SPC25 | 57405 | 24031 | 0.75 | 0.29 | 0.07 | 2.46643141252268e-17 | 8.31039400135392e-13 |
74 | 14 | Prolif | Proliferating cells | wk16 | PTTG1 | 9232 | 9690 | 0.74 | 0.48 | 0.27 | 5.29490309373978e-08 | 0.00178406464840468 |
74 | 14 | Prolif | Proliferating cells | wk16 | MCM7 | 4176 | 6950 | 0.72 | 0.47 | 0.28 | 9.7060766040741e-08 | 0.00327036545097673 |
74 | 14 | Prolif | Proliferating cells | wk16 | NUSAP1 | 51203 | 18538 | 0.72 | 0.34 | 0.15 | 2.24836118133249e-07 | 0.0075756281643817 |
74 | 14 | Prolif | Proliferating cells | wk16 | DUT | 1854 | 3078 | 0.7 | 0.74 | 0.58 | 1.01289507302432e-09 | 3.41284865904814e-05 |
74 | 14 | Prolif | Proliferating cells | wk16 | RPA3 | 6119 | 10291 | 0.7 | 0.48 | 0.33 | 1.46089387975098e-06 | 0.04 |
74 | 14 | Prolif | Proliferating cells | wk16 | CKS1B | 1163 | 19083 | 0.7 | 0.52 | 0.35 | 6.66684771132899e-08 | 0.00224632766785519 |
74 | 14 | Prolif | Proliferating cells | wk16 | POLR2I | 5438 | 9196 | 0.69 | 0.55 | 0.41 | 1.60442413668418e-07 | 0.00540594668614369 |
74 | 14 | Prolif | Proliferating cells | wk16 | GAPDH | 2597 | 4141 | 0.69 | 1 | 0.97 | 9.99458628302128e-29 | 3.36757590220119e-24 |
74 | 14 | Prolif | Proliferating cells | wk16 | SNRPD1 | 6632 | 11158 | 0.68 | 0.8 | 0.63 | 2.41453418639366e-13 | 8.13553148763479e-09 |
74 | 14 | Prolif | Proliferating cells | wk16 | SNRPD2 | 6633 | 11159 | 0.67 | 0.89 | 0.81 | 2.79408859510603e-17 | 9.41440211235027e-13 |
74 | 14 | Prolif | Proliferating cells | wk16 | RAN | 5901 | 9846 | 0.66 | 0.9 | 0.78 | 7.83673448573746e-15 | 2.64050931762438e-10 |
74 | 14 | Prolif | Proliferating cells | wk16 | LDHA | 3939 | 6535 | 0.66 | 0.65 | 0.52 | 2.59559944915336e-08 | 0.000874561278397732 |
74 | 14 | Prolif | Proliferating cells | wk16 | MIF | 4282 | 7097 | 0.65 | 0.81 | 0.68 | 6.51611644077519e-13 | 2.19554027355479e-08 |
74 | 14 | Prolif | Proliferating cells | wk16 | TK1 | 7083 | 11830 | 0.65 | 0.32 | 0.14 | 4.32666865630108e-08 | 0.00145782773705408 |
74 | 14 | Prolif | Proliferating cells | wk16 | HMGB1 | 3146 | 4983 | 0.61 | 0.96 | 0.96 | 2.24199297136002e-13 | 7.55417111770044e-09 |
74 | 14 | Prolif | Proliferating cells | wk16 | PTMA | 5757 | 9623 | 0.6 | 1 | 1 | 4.75765069623354e-28 | 1.60304282558893e-23 |
74 | 14 | Prolif | Proliferating cells | wk16 | LSM3 | 27258 | 17874 | 0.59 | 0.7 | 0.57 | 3.31311999002279e-10 | 1.11632264943828e-05 |
74 | 14 | Prolif | Proliferating cells | wk16 | PRDX2 | 7001 | 9353 | 0.59 | 0.9 | 0.8 | 8.00776103613127e-15 | 2.69813500351407e-10 |
74 | 14 | Prolif | Proliferating cells | wk16 | LSM4 | 25804 | 17259 | 0.59 | 0.64 | 0.51 | 1.5796099383465e-07 | 0.00532233772626469 |
74 | 14 | Prolif | Proliferating cells | wk16 | NME1 | 4830 | 7849 | 0.59 | 0.61 | 0.47 | 6.61686883867515e-08 | 0.0022294877865032 |
74 | 14 | Prolif | Proliferating cells | wk16 | RRM2 | 6241 | 10452 | 0.58 | 0.24 | 0.08 | 1.10448931345127e-08 | 0.000372146629274271 |
74 | 14 | Prolif | Proliferating cells | wk16 | YBX1 | 4904 | 8014 | 0.58 | 1 | 0.92 | 1.50107706887304e-18 | 5.05772907586084e-14 |
74 | 14 | Prolif | Proliferating cells | wk16 | GSTO1 | 9446 | 13312 | 0.57 | 0.55 | 0.36 | 6.83159556963114e-09 | 0.000230183781123152 |
74 | 14 | Prolif | Proliferating cells | wk16 | LDHB | 3945 | 6541 | 0.57 | 0.98 | 0.9 | 1.8538747032402e-14 | 6.24644542509752e-10 |
74 | 14 | Prolif | Proliferating cells | wk16 | CENPV | 201161 | 29920 | 0.57 | 0.52 | 0.36 | 7.65601365380406e-07 | 0.02 |
74 | 14 | Prolif | Proliferating cells | wk16 | RBX1 | 9978 | 9928 | 0.55 | 0.72 | 0.62 | 2.73177815924572e-08 | 0.000920445332976253 |
74 | 14 | Prolif | Proliferating cells | wk16 | CCT8 | 10694 | 1623 | 0.54 | 0.64 | 0.56 | 2.38500659246289e-07 | 0.00803604121264446 |
74 | 14 | Prolif | Proliferating cells | wk16 | RPL35 | 11224 | 10344 | 0.54 | 1 | 0.99 | 1.72788895463932e-26 | 5.82194904376172e-22 |
74 | 14 | Prolif | Proliferating cells | wk16 | RPS3A | 6189 | 10421 | 0.54 | 1 | 1 | 2.88622762004263e-36 | 9.72485534297163e-32 |
74 | 14 | Prolif | Proliferating cells | wk16 | AURKB | 9212 | 11390 | 0.54 | 0.24 | 0.1 | 1.35200544758642e-06 | 0.04 |
74 | 14 | Prolif | Proliferating cells | wk16 | RPL18A | 6142 | 10311 | 0.53 | 1 | 0.99 | 1.39146141858191e-29 | 4.68839010376989e-25 |
74 | 14 | Prolif | Proliferating cells | wk16 | PIMREG | 54478 | 25483 | 0.52 | 0.24 | 0.09 | 9.89618269478497e-08 | 0.00333441979718085 |
74 | 14 | Prolif | Proliferating cells | wk16 | ERH | 2079 | 3447 | 0.52 | 0.8 | 0.78 | 9.91985477420086e-07 | 0.03 |
74 | 14 | Prolif | Proliferating cells | wk16 | LSM5 | 23658 | 17162 | 0.52 | 0.67 | 0.53 | 1.27906274976879e-07 | 0.00430967402907098 |
74 | 14 | Prolif | Proliferating cells | wk16 | RPL22 | 6146 | 10315 | 0.52 | 1 | 0.98 | 6.68472913587743e-20 | 2.25235263504254e-15 |
74 | 14 | Prolif | Proliferating cells | wk16 | PARK7 | 11315 | 16369 | 0.51 | 0.8 | 0.77 | 2.05318650152755e-08 | 0.000691800659824694 |
74 | 14 | Prolif | Proliferating cells | wk16 | TPI1 | 7167 | 12009 | 0.51 | 0.87 | 0.81 | 2.72182933736829e-10 | 9.17093176932873e-06 |
74 | 14 | Prolif | Proliferating cells | wk16 | PKM | 5315 | 9021 | 0.51 | 0.75 | 0.66 | 6.56183721584128e-08 | 0.00221094543150556 |
74 | 14 | Prolif | Proliferating cells | wk16 | PSMA4 | 5685 | 9533 | 0.5 | 0.83 | 0.73 | 9.32380912985573e-09 | 0.000314156424821359 |
74 | 14 | Prolif | Proliferating cells | wk16 | EEF1B2 | 1933 | 3208 | 0.5 | 0.94 | 0.87 | 8.74323486420843e-14 | 2.94594555514639e-09 |
74 | 14 | Prolif | Proliferating cells | wk16 | SNRPG | 6637 | 11163 | 0.5 | 0.75 | 0.65 | 8.62579356238542e-09 | 0.000290637488291014 |
74 | 14 | Prolif | Proliferating cells | wk16 | SRP9 | 6726 | 11304 | 0.48 | 0.77 | 0.7 | 9.08661713388842e-08 | 0.00306164477709237 |
74 | 14 | Prolif | Proliferating cells | wk16 | TXN | 7295 | 12435 | 0.48 | 0.82 | 0.79 | 1.02720325547302e-07 | 0.0034610586489908 |
74 | 14 | Prolif | Proliferating cells | wk16 | RPL31 | 6160 | 10334 | 0.48 | 1 | 0.99 | 5.37305314245426e-23 | 1.81039652581854e-18 |
74 | 14 | Prolif | Proliferating cells | wk16 | SEC61G | 23480 | 18277 | 0.48 | 0.76 | 0.69 | 1.56002409141266e-09 | 5.25634517360581e-05 |
74 | 14 | Prolif | Proliferating cells | wk16 | UBA52 | 7311 | 12458 | 0.48 | 0.98 | 0.96 | 9.07424409319654e-14 | 3.05747580476164e-09 |
74 | 14 | Prolif | Proliferating cells | wk16 | RPL39 | 6170 | 10350 | 0.48 | 1 | 0.99 | 2.71329862831141e-25 | 9.14218839823247e-21 |
74 | 14 | Prolif | Proliferating cells | wk16 | PPIA | 5478 | 9253 | 0.47 | 0.97 | 0.95 | 4.85545499280895e-14 | 1.63599700527705e-09 |
74 | 14 | Prolif | Proliferating cells | wk16 | RPS17 | 6218 | 10397 | 0.47 | 1 | 0.99 | 1.13265495764743e-28 | 3.81636761429726e-24 |
74 | 14 | Prolif | Proliferating cells | wk16 | RPSA | 3921 | 6502 | 0.47 | 1 | 0.98 | 2.66396183755657e-20 | 8.97595301546312e-16 |
74 | 14 | Prolif | Proliferating cells | wk16 | RPL32 | 6161 | 10336 | 0.47 | 1 | 0.99 | 6.48105330008486e-29 | 2.18372609893059e-24 |
74 | 14 | Prolif | Proliferating cells | wk16 | SNRPE | 6635 | 11161 | 0.47 | 0.82 | 0.82 | 3.61226471898314e-08 | 0.00121711647441418 |
74 | 14 | Prolif | Proliferating cells | wk16 | RPLP0 | 6175 | 10371 | 0.47 | 1 | 0.99 | 9.96242171345325e-24 | 3.35673837213094e-19 |
74 | 14 | Prolif | Proliferating cells | wk16 | RPS5 | 6193 | 10426 | 0.47 | 1 | 0.99 | 4.65090525541944e-26 | 1.56707601676102e-21 |
74 | 14 | Prolif | Proliferating cells | wk16 | PTGES3 | 10728 | 16049 | 0.46 | 0.77 | 0.71 | 4.54203929377754e-07 | 0.01 |
74 | 14 | Prolif | Proliferating cells | wk16 | RPL23A | 6147 | 10317 | 0.46 | 1 | 0.99 | 1.06628353871691e-21 | 3.59273575535276e-17 |
74 | 14 | Prolif | Proliferating cells | wk16 | RPS6 | 6194 | 10429 | 0.46 | 1 | 1 | 1.6794180542497e-25 | 5.65863119198892e-21 |
74 | 14 | Prolif | Proliferating cells | wk16 | UQCRQ | 27089 | 29594 | 0.46 | 0.78 | 0.73 | 4.70133324406148e-07 | 0.01 |
74 | 14 | Prolif | Proliferating cells | wk16 | EEF1D | 1936 | 3211 | 0.45 | 0.91 | 0.87 | 1.13383885481343e-10 | 3.82035663740838e-06 |
74 | 14 | Prolif | Proliferating cells | wk16 | RPS24 | 6229 | 10411 | 0.45 | 1 | 0.99 | 5.28303569779044e-19 | 1.78006604801351e-14 |
74 | 14 | Prolif | Proliferating cells | wk16 | RPL26 | 6154 | 10327 | 0.45 | 1 | 0.99 | 1.14011462345893e-26 | 3.84150221228252e-22 |
74 | 14 | Prolif | Proliferating cells | wk16 | RPS15A | 6210 | 10389 | 0.45 | 1 | 0.99 | 1.17303938490408e-23 | 3.9524389034958e-19 |
74 | 14 | Prolif | Proliferating cells | wk16 | SNRPF | 6636 | 11162 | 0.44 | 0.78 | 0.66 | 2.56225503622112e-07 | 0.00863326211904344 |
74 | 14 | Prolif | Proliferating cells | wk16 | NDUFS5 | 4725 | 7712 | 0.44 | 0.84 | 0.81 | 1.57300937770809e-08 | 0.000530009779724964 |
74 | 14 | Prolif | Proliferating cells | wk16 | PFN1 | 5216 | 8881 | 0.44 | 0.82 | 0.79 | 8.77904784114091e-07 | 0.02 |
74 | 14 | Prolif | Proliferating cells | wk16 | CHCHD2 | 51142 | 21645 | 0.44 | 0.97 | 0.92 | 3.45544026199434e-11 | 1.16427604187637e-06 |
74 | 14 | Prolif | Proliferating cells | wk16 | RPS14 | 6208 | 10387 | 0.43 | 1 | 1 | 1.57939876730813e-26 | 5.32162620656801e-22 |
74 | 14 | Prolif | Proliferating cells | wk16 | TMSB10 | 9168 | 11879 | 0.43 | 0.98 | 0.98 | 1.79595809236077e-17 | 6.05130119640039e-13 |
74 | 14 | Prolif | Proliferating cells | wk16 | RPL12 | 6136 | 10302 | 0.43 | 1 | 0.99 | 3.7911444975146e-17 | 1.27738822699257e-12 |
74 | 14 | Prolif | Proliferating cells | wk16 | RPS15 | 6209 | 10388 | 0.42 | 1 | 0.99 | 1.13182739126993e-22 | 3.81357921214491e-18 |
74 | 14 | Prolif | Proliferating cells | wk16 | YWHAQ | 10971 | 12854 | 0.42 | 0.82 | 0.73 | 6.006564880913e-09 | 0.000202385197097483 |
74 | 14 | Prolif | Proliferating cells | wk16 | RPL7 | 6129 | 10363 | 0.42 | 1 | 1 | 2.60931415511878e-21 | 8.79182311425722e-17 |
74 | 14 | Prolif | Proliferating cells | wk16 | RPLP2 | 6181 | 10377 | 0.42 | 1 | 0.99 | 8.46089235896373e-22 | 2.85081307142924e-17 |
74 | 14 | Prolif | Proliferating cells | wk16 | SRSF3 | 6428 | 10785 | 0.41 | 0.9 | 0.85 | 9.47286033393467e-07 | 0.03 |
74 | 14 | Prolif | Proliferating cells | wk16 | RPL6 | 6128 | 10362 | 0.41 | 1 | 0.99 | 5.25399635252038e-17 | 1.77028153101822e-12 |
74 | 14 | Prolif | Proliferating cells | wk16 | RPL37 | 6167 | 10347 | 0.41 | 1 | 0.98 | 2.31189673547077e-18 | 7.78970486049521e-14 |
74 | 14 | Prolif | Proliferating cells | wk16 | RPS10 | 6204 | 10383 | 0.4 | 0.97 | 0.93 | 1.6809700547508e-12 | 5.66386050247733e-08 |
74 | 14 | Prolif | Proliferating cells | wk16 | NPM1 | 4869 | 7910 | 0.39 | 1 | 0.97 | 1.8918440390384e-12 | 6.374379305136e-08 |
74 | 14 | Prolif | Proliferating cells | wk16 | ATP5MPL | 9556 | 1188 | 0.39 | 0.81 | 0.77 | 2.82908010430745e-07 | 0.00953230250345352 |
74 | 14 | Prolif | Proliferating cells | wk16 | RPL8 | 6132 | 10368 | 0.38 | 1 | 0.99 | 2.4215943309607e-21 | 8.159319938739e-17 |
74 | 14 | Prolif | Proliferating cells | wk16 | ATP5F1E | 514 | 838 | 0.38 | 0.95 | 0.9 | 1.69983903958701e-08 | 0.000572743765998447 |
74 | 14 | Prolif | Proliferating cells | wk16 | RPL36 | 25873 | 13631 | 0.38 | 0.97 | 0.97 | 2.87015480521645e-10 | 9.6706996006963e-06 |
74 | 14 | Prolif | Proliferating cells | wk16 | RPL19 | 6143 | 10312 | 0.37 | 1 | 0.99 | 1.28884140578981e-21 | 4.34262223266817e-17 |