Marker Genes
Dataset: Single-cell transcriptomics reveals gene expression dynamics of human fetal kidney development
- tissue: Kidney
- ontology: Kidney
- genotype: -
- stage: Fetal
- treatment condition: WT
- cell/nucleus: Cells
- pmid: 30789893
- subset name: wk16
- total genes: Not reported
- clustering: scran
- pseudotime: Monocle 2
- link: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE114530
Rows:100
| dataset id | cluster id | cluster name | cell type name | sample id | gene symbol | entrez geneid | species specific geneid |
avg log fc (?)
|
pct 1 | pct 2 | p value | padj |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 74 | 13 | Pod | Podocyte | wk16 | NPHS2 | 7827 | 13394 | 2.45 | 0.94 | 0.07 | 0 | 0 |
| 74 | 13 | Pod | Podocyte | wk16 | TPPP3 | 51673 | 24162 | 2.38 | 0.91 | 0.09 | 0 | 0 |
| 74 | 13 | Pod | Podocyte | wk16 | PODXL | 5420 | 9171 | 2.3 | 0.94 | 0.1 | 0 | 0 |
| 74 | 13 | Pod | Podocyte | wk16 | SOST | 50964 | 13771 | 2.27 | 0.9 | 0.08 | 0 | 0 |
| 74 | 13 | Pod | Podocyte | wk16 | AIF1 | 199 | 352 | 2.13 | 0.84 | 0.07 | 0 | 0 |
| 74 | 13 | Pod | Podocyte | wk16 | THSD7A | 221981 | 22207 | 2.13 | 0.91 | 0.11 | 0 | 0 |
| 74 | 13 | Pod | Podocyte | wk16 | MAFB | 9935 | 6408 | 2.13 | 0.99 | 0.3 | 9.8542779881485E-307 | 3.3203004253268E-302 |
| 74 | 13 | Pod | Podocyte | wk16 | PTPRO | 5800 | 9678 | 2.06 | 0.87 | 0.05 | 0 | 0 |
| 74 | 13 | Pod | Podocyte | wk16 | CLIC5 | 53405 | 13517 | 2.02 | 0.83 | 0.05 | 0 | 0 |
| 74 | 13 | Pod | Podocyte | wk16 | GADD45A | 1647 | 4095 | 1.84 | 0.96 | 0.45 | 4.6390465711503E-238 | 1.5630803516834E-233 |
| 74 | 13 | Pod | Podocyte | wk16 | MYL9 | 10398 | 15754 | 1.83 | 0.91 | 0.35 | 2.795278903658E-223 | 9.4184127379851E-219 |
| 74 | 13 | Pod | Podocyte | wk16 | HTRA1 | 5654 | 9476 | 1.82 | 0.74 | 0.11 | 0 | 0 |
| 74 | 13 | Pod | Podocyte | wk16 | MPP5 | 64398 | 18669 | 1.76 | 0.79 | 0.11 | 0 | 0 |
| 74 | 13 | Pod | Podocyte | wk16 | MME | 4311 | 7154 | 1.75 | 0.73 | 0.06 | 0 | 0 |
| 74 | 13 | Pod | Podocyte | wk16 | NES | 10763 | 7756 | 1.7 | 0.85 | 0.19 | 3.5127549650837E-296 | 1.1835876579353E-291 |
| 74 | 13 | Pod | Podocyte | wk16 | MXRA8 | 54587 | 7542 | 1.6 | 0.89 | 0.26 | 2.2777734192893E-260 | 7.6747297589533E-256 |
| 74 | 13 | Pod | Podocyte | wk16 | BST2 | 684 | 1119 | 1.58 | 0.96 | 0.45 | 9.4016331881602E-197 | 3.1677862864187E-192 |
| 74 | 13 | Pod | Podocyte | wk16 | PTH1R | 5745 | 9608 | 1.55 | 0.64 | 0.06 | 0 | 0 |
| 74 | 13 | Pod | Podocyte | wk16 | IQGAP2 | 10788 | 6111 | 1.52 | 0.75 | 0.11 | 0 | 0 |
| 74 | 13 | Pod | Podocyte | wk16 | TNNI1 | 7135 | 11945 | 1.47 | 0.61 | 0.09 | 1.5768537372047E-237 | 5.3130509821374E-233 |
| 74 | 13 | Pod | Podocyte | wk16 | SPINT2 | 10653 | 11247 | 1.46 | 0.94 | 0.41 | 2.2412957016446E-211 | 7.5518217371212E-207 |
| 74 | 13 | Pod | Podocyte | wk16 | PDLIM2 | 64236 | 13992 | 1.4 | 0.74 | 0.18 | 1.5656911236476E-207 | 5.2754396720183E-203 |
| 74 | 13 | Pod | Podocyte | wk16 | LOXL1 | 4016 | 6665 | 1.4 | 0.78 | 0.18 | 3.9644562598834E-236 | 1.3357838922051E-231 |
| 74 | 13 | Pod | Podocyte | wk16 | S100A6 | 6277 | 10496 | 1.34 | 0.9 | 0.39 | 5.2191470993708E-177 | 1.758539423662E-172 |
| 74 | 13 | Pod | Podocyte | wk16 | ANXA2 | 302 | 537 | 1.32 | 0.93 | 0.43 | 3.8557704397323E-179 | 1.2991632919634E-174 |
| 74 | 13 | Pod | Podocyte | wk16 | PLTP | 5360 | 9093 | 1.3 | 0.61 | 0.1 | 8.1441675745234E-229 | 2.7440958225599E-224 |
| 74 | 13 | Pod | Podocyte | wk16 | VEGFA | 7422 | 12680 | 1.3 | 0.68 | 0.15 | 2.4899105718302E-206 | 8.3895046807246E-202 |
| 74 | 13 | Pod | Podocyte | wk16 | SPARC | 6678 | 11219 | 1.3 | 0.99 | 0.65 | 4.079887527509E-185 | 1.3746773035189E-180 |
| 74 | 13 | Pod | Podocyte | wk16 | WT1 | 7490 | 12796 | 1.29 | 0.88 | 0.33 | 3.171451870455E-184 | 1.0685889932311E-179 |
| 74 | 13 | Pod | Podocyte | wk16 | TNNT2 | 7139 | 11949 | 1.28 | 0.53 | 0.05 | 4.2967839447739E-279 | 1.4477583823521E-274 |
| 74 | 13 | Pod | Podocyte | wk16 | RETREG1 | 54463 | 25964 | 1.28 | 0.65 | 0.09 | 4.2690338820303E-263 | 1.4384082762113E-258 |
| 74 | 13 | Pod | Podocyte | wk16 | TCF21 | 6943 | 11632 | 1.27 | 0.95 | 0.35 | 4.5784142192645E-187 | 1.542650887039E-182 |
| 74 | 13 | Pod | Podocyte | wk16 | DUSP1 | 1843 | 3064 | 1.25 | 0.87 | 0.6 | 3.1400442710912E-110 | 1.0580065167015E-105 |
| 74 | 13 | Pod | Podocyte | wk16 | CPXM1 | 56265 | 15771 | 1.25 | 0.76 | 0.3 | 5.4282690677173E-144 | 1.8290009796767E-139 |
| 74 | 13 | Pod | Podocyte | wk16 | MRGPRF | 116535 | 24828 | 1.25 | 0.53 | 0.03 | 0 | 0 |
| 74 | 13 | Pod | Podocyte | wk16 | ARMH4 | 145407 | 19846 | 1.24 | 0.57 | 0.11 | 5.6280177912706E-184 | 1.8963043145907E-179 |
| 74 | 13 | Pod | Podocyte | wk16 | SEMA3B | 7869 | 10724 | 1.24 | 0.66 | 0.1 | 3.6416533007074E-256 | 1.2270186631404E-251 |
| 74 | 13 | Pod | Podocyte | wk16 | DDN | 23109 | 24458 | 1.24 | 0.48 | 0.005 | 0 | 0 |
| 74 | 13 | Pod | Podocyte | wk16 | CLDN5 | 7122 | 2047 | 1.24 | 0.74 | 0.16 | 2.9716157228555E-206 | 1.0012562016589E-201 |
| 74 | 13 | Pod | Podocyte | wk16 | TGFBR3 | 7049 | 11774 | 1.23 | 0.57 | 0.07 | 1.5451351281126E-255 | 5.2061783006626E-251 |
| 74 | 13 | Pod | Podocyte | wk16 | SRGAP1 | 57522 | 17382 | 1.23 | 0.69 | 0.18 | 5.2421656953356E-178 | 1.7662953093864E-173 |
| 74 | 13 | Pod | Podocyte | wk16 | ST3GAL6 | 10402 | 18080 | 1.22 | 0.54 | 0.04 | 0 | 0 |
| 74 | 13 | Pod | Podocyte | wk16 | CITED2 | 10370 | 1987 | 1.19 | 0.9 | 0.51 | 3.1295182313635E-133 | 1.0544598728756E-128 |
| 74 | 13 | Pod | Podocyte | wk16 | RAMP1 | 10267 | 9843 | 1.19 | 0.51 | 0.04 | 0 | 0 |
| 74 | 13 | Pod | Podocyte | wk16 | BCAM | 4059 | 6722 | 1.18 | 0.89 | 0.45 | 1.2472183233592E-147 | 4.2023774187266E-143 |
| 74 | 13 | Pod | Podocyte | wk16 | RGS3 | 5998 | 9999 | 1.16 | 0.63 | 0.18 | 2.1451079744703E-147 | 7.2277268091803E-143 |
| 74 | 13 | Pod | Podocyte | wk16 | SLC9A3R2 | 9351 | 11076 | 1.14 | 0.7 | 0.19 | 6.6691221974109E-170 | 2.2470940331956E-165 |
| 74 | 13 | Pod | Podocyte | wk16 | SPOCK2 | 9806 | 13564 | 1.14 | 0.6 | 0.16 | 2.8549959575955E-139 | 9.6196233795223E-135 |
| 74 | 13 | Pod | Podocyte | wk16 | TJP1 | 7082 | 11827 | 1.14 | 0.72 | 0.27 | 1.4607997887736E-136 | 4.9220188082939E-132 |
| 74 | 13 | Pod | Podocyte | wk16 | TUBB2A | 7280 | 12412 | 1.12 | 0.63 | 0.22 | 4.2517221457515E-116 | 1.4325752597895E-111 |
| 74 | 13 | Pod | Podocyte | wk16 | NPHS1 | 4868 | 7908 | 1.12 | 0.56 | 0.05 | 1.5950175813675E-292 | 5.3742522386595E-288 |
| 74 | 13 | Pod | Podocyte | wk16 | TSC22D3 | 1831 | 3051 | 1.11 | 0.79 | 0.37 | 6.285715252934E-130 | 2.1179088973236E-125 |
| 74 | 13 | Pod | Podocyte | wk16 | GSN | 2934 | 4620 | 1.1 | 0.64 | 0.16 | 3.338208511322E-163 | 1.1247759758048E-158 |
| 74 | 13 | Pod | Podocyte | wk16 | ST6GALNAC3 | 256435 | 19343 | 1.1 | 0.48 | 0.05 | 8.9145468995533E-222 | 3.0036674323355E-217 |
| 74 | 13 | Pod | Podocyte | wk16 | CXCL12 | 6387 | 10672 | 1.09 | 0.61 | 0.23 | 2.7121755407524E-87 | 9.1384042670111E-83 |
| 74 | 13 | Pod | Podocyte | wk16 | TYRO3 | 7301 | 12446 | 1.03 | 0.51 | 0.1 | 8.8245014884188E-150 | 2.9733275315078E-145 |
| 74 | 13 | Pod | Podocyte | wk16 | CRB2 | 286204 | 18688 | 1.03 | 0.48 | 0.07 | 1.2797375424802E-173 | 4.3119476756327E-169 |
| 74 | 13 | Pod | Podocyte | wk16 | CD151 | 977 | 1630 | 1.02 | 0.81 | 0.46 | 4.1830390362685E-109 | 1.4094331728803E-104 |
| 74 | 13 | Pod | Podocyte | wk16 | SNCA | 6622 | 11138 | 1.01 | 0.57 | 0.15 | 2.4230579898513E-136 | 8.1642515910049E-132 |
| 74 | 13 | Pod | Podocyte | wk16 | COL4A4 | 1286 | 2206 | 1 | 0.41 | 0.01 | 0 | 0 |
| 74 | 13 | Pod | Podocyte | wk16 | SYNPO | 11346 | 30672 | 1 | 0.46 | 0.03 | 1.1073394213328E-273 | 3.7310694462389E-269 |
| 74 | 13 | Pod | Podocyte | wk16 | DUSP23 | 54935 | 21480 | 0.98 | 0.5 | 0.17 | 1.7797654147022E-90 | 5.9967415882978E-86 |
| 74 | 13 | Pod | Podocyte | wk16 | RIPOR1 | 79567 | 25836 | 0.97 | 0.44 | 0.04 | 1.1208695064806E-211 | 3.7766577151356E-207 |
| 74 | 13 | Pod | Podocyte | wk16 | ACTN4 | 81 | 166 | 0.96 | 0.68 | 0.34 | 1.6638456020404E-89 | 5.606161371515E-85 |
| 74 | 13 | Pod | Podocyte | wk16 | DACH1 | 1602 | 2663 | 0.95 | 0.66 | 0.29 | 6.3846081340771E-96 | 2.1512298646959E-91 |
| 74 | 13 | Pod | Podocyte | wk16 | KLRB1 | 3820 | 6373 | 0.94 | 0.39 | 0.02 | 3.5462336257755E-290 | 1.1948679578688E-285 |
| 74 | 13 | Pod | Podocyte | wk16 | ITM2B | 9445 | 6174 | 0.93 | 0.97 | 0.9 | 3.1959248644596E-109 | 1.076834923831E-104 |
| 74 | 13 | Pod | Podocyte | wk16 | SELENOP | 6414 | 10751 | 0.93 | 0.84 | 0.47 | 2.2810361174551E-102 | 7.6857230941532E-98 |
| 74 | 13 | Pod | Podocyte | wk16 | NECTIN2 | 5819 | 9707 | 0.92 | 0.73 | 0.37 | 1.3419314287822E-94 | 4.5215037561386E-90 |
| 74 | 13 | Pod | Podocyte | wk16 | LEPROT | 54741 | 29477 | 0.92 | 0.79 | 0.43 | 1.8918098514947E-102 | 6.3742641136263E-98 |
| 74 | 13 | Pod | Podocyte | wk16 | ZFP36L2 | 678 | 1108 | 0.91 | 0.79 | 0.49 | 2.5422433031079E-81 | 8.5658345854918E-77 |
| 74 | 13 | Pod | Podocyte | wk16 | PLCE1 | 51196 | 17175 | 0.91 | 0.41 | 0.05 | 1.1477024711052E-185 | 3.867068706142E-181 |
| 74 | 13 | Pod | Podocyte | wk16 | NTNG1 | 22854 | 23319 | 0.9 | 0.33 | 0.006 | 0 | 0 |
| 74 | 13 | Pod | Podocyte | wk16 | WT1-AS | 51352 | 18135 | 0.9 | 0.52 | 0.14 | 1.442262709331E-116 | 4.85955997282E-112 |
| 74 | 13 | Pod | Podocyte | wk16 | ARHGEF3 | 50650 | 683 | 0.89 | 0.4 | 0.05 | 1.8680069487136E-157 | 6.2940626129955E-153 |
| 74 | 13 | Pod | Podocyte | wk16 | AIF1L | 83543 | 28904 | 0.88 | 0.58 | 0.23 | 2.4102160720458E-86 | 8.120982033151E-82 |
| 74 | 13 | Pod | Podocyte | wk16 | FOXC2 | 2303 | 3801 | 0.88 | 0.69 | 0.31 | 2.4723307520237E-82 | 8.3302712358687E-78 |
| 74 | 13 | Pod | Podocyte | wk16 | VAMP2 | 6844 | 12643 | 0.87 | 0.78 | 0.44 | 1.0992389629155E-91 | 3.7037757616475E-87 |
| 74 | 13 | Pod | Podocyte | wk16 | CD59 | 966 | 1689 | 0.87 | 0.74 | 0.44 | 3.1350688548852E-78 | 1.056330099965E-73 |
| 74 | 13 | Pod | Podocyte | wk16 | VASN | 114990 | 18517 | 0.85 | 0.44 | 0.12 | 3.2655669635122E-85 | 1.1003001326858E-80 |
| 74 | 13 | Pod | Podocyte | wk16 | ANXA1 | 301 | 533 | 0.85 | 0.23 | 0.03 | 2.6299304371011E-86 | 8.8612876147683E-82 |
| 74 | 13 | Pod | Podocyte | wk16 | PARD3B | 117583 | 14446 | 0.85 | 0.41 | 0.08 | 3.0756381267763E-110 | 1.036305510436E-105 |
| 74 | 13 | Pod | Podocyte | wk16 | TMEM106B | 54664 | 22407 | 0.85 | 0.53 | 0.19 | 1.0879711725234E-80 | 3.6658100687003E-76 |
| 74 | 13 | Pod | Podocyte | wk16 | CTSD | 1509 | 2529 | 0.84 | 0.65 | 0.32 | 7.9356867954237E-77 | 2.6738503088501E-72 |
| 74 | 13 | Pod | Podocyte | wk16 | EIF3M | 10480 | 24460 | 0.84 | 0.92 | 0.7 | 6.830289247425E-92 | 2.3013976590274E-87 |
| 74 | 13 | Pod | Podocyte | wk16 | NDRG2 | 57447 | 14460 | 0.83 | 0.41 | 0.15 | 5.0258643636565E-59 | 1.6934147386904E-54 |
| 74 | 13 | Pod | Podocyte | wk16 | EFNB2 | 1948 | 3227 | 0.82 | 0.67 | 0.33 | 3.8017819982712E-74 | 1.2809724264975E-69 |
| 74 | 13 | Pod | Podocyte | wk16 | SAMD11 | 148398 | 28706 | 0.81 | 0.5 | 0.16 | 4.7250843252857E-84 | 1.5920699125618E-79 |
| 74 | 13 | Pod | Podocyte | wk16 | FOXC1 | 2296 | 3800 | 0.81 | 0.53 | 0.18 | 1.5660391650138E-87 | 5.2766123625975E-83 |
| 74 | 13 | Pod | Podocyte | wk16 | HMGN3 | 9324 | 12312 | 0.8 | 0.94 | 0.74 | 3.1086256998228E-99 | 1.0474203432983E-94 |
| 74 | 13 | Pod | Podocyte | wk16 | RBMS1 | 5937 | 9907 | 0.8 | 0.73 | 0.43 | 1.0633577870678E-73 | 3.5828777277462E-69 |
| 74 | 13 | Pod | Podocyte | wk16 | TMEM150C | 441027 | 37263 | 0.8 | 0.37 | 0.06 | 5.0603882730574E-126 | 1.705047224724E-121 |
| 74 | 13 | Pod | Podocyte | wk16 | SEPTIN11 | 55752 | 25589 | 0.8 | 0.84 | 0.51 | 1.8958017831268E-85 | 6.3877145280673E-81 |
| 74 | 13 | Pod | Podocyte | wk16 | PLA2R1 | 22925 | 9042 | 0.79 | 0.31 | 0.01 | 4.3167173874354E-211 | 1.4544747565225E-206 |
| 74 | 13 | Pod | Podocyte | wk16 | VWA1 | 64856 | 30910 | 0.79 | 0.39 | 0.11 | 2.6698788768463E-70 | 8.9958898876458E-66 |
| 74 | 13 | Pod | Podocyte | wk16 | LTBP4 | 8425 | 6717 | 0.79 | 0.61 | 0.26 | 1.4195262455636E-72 | 4.782951731802E-68 |
| 74 | 13 | Pod | Podocyte | wk16 | PDE4DIP | 9659 | 15580 | 0.78 | 0.38 | 0.07 | 1.2648514394178E-114 | 4.2617904399744E-110 |
| 74 | 13 | Pod | Podocyte | wk16 | ENPEP | 2028 | 3355 | 0.78 | 0.36 | 0.05 | 2.038347592353E-128 | 6.8680083776743E-124 |
| 74 | 13 | Pod | Podocyte | wk16 | TAGLN2 | 8407 | 11554 | 0.78 | 0.53 | 0.26 | 2.3532106908063E-52 | 7.9289081016029E-48 |
| 74 | 13 | Pod | Podocyte | wk16 | CKB | 1152 | 1991 | 0.77 | 0.68 | 0.37 | 1.5778587016098E-64 | 5.3164371092042E-60 |