Marker Genes
Dataset: Single-cell transcriptomics reveals gene expression dynamics of human fetal kidney development
- tissue: Kidney
- ontology: Kidney
- genotype: -
- stage: Fetal
- treatment condition: WT
- cell/nucleus: Cells
- pmid: 30789893
- subset name: wk16
- total genes: Not reported
- clustering: scran
- pseudotime: Monocle 2
- link: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE114530
Rows:100
dataset id | cluster id | cluster name | cell type name | sample id | gene symbol | entrez geneid | species specific geneid |
avg log fc (?)
|
pct 1 | pct 2 | p value | padj |
---|---|---|---|---|---|---|---|---|---|---|---|---|
74 | 11 | NPCc | Nephron progenitor cells c | wk16 | CRABP2 | 1382 | 2339 | 1.18 | 0.78 | 0.27 | 5.47340645778042e-196 | 1.84420957188453e-191 |
74 | 11 | NPCc | Nephron progenitor cells c | wk16 | TMEM100 | 55273 | 25607 | 1.18 | 0.68 | 0.19 | 2.4747967890676e-183 | 8.33858030108436e-179 |
74 | 11 | NPCc | Nephron progenitor cells c | wk16 | DAPL1 | 92196 | 21490 | 1.12 | 0.79 | 0.25 | 1.95328149840087e-201 | 6.5813866807119e-197 |
74 | 11 | NPCc | Nephron progenitor cells c | wk16 | NNAT | 4826 | 7860 | 0.98 | 0.75 | 0.27 | 7.70425938089077e-166 | 2.59587315579734e-161 |
74 | 11 | NPCc | Nephron progenitor cells c | wk16 | HLA-DQB1 | 3119 | 4944 | 0.82 | 0.55 | 0.16 | 3.15987662473694e-126 | 1.06468882993886e-121 |
74 | 11 | NPCc | Nephron progenitor cells c | wk16 | CITED1 | 4435 | 1986 | 0.81 | 0.47 | 0.1 | 2.46775689293834e-136 | 8.31486007506645e-132 |
74 | 11 | NPCc | Nephron progenitor cells c | wk16 | LYPD1 | 116372 | 28431 | 0.79 | 0.76 | 0.31 | 3.23352457835248e-119 | 1.08950377143008e-114 |
74 | 11 | NPCc | Nephron progenitor cells c | wk16 | NKAIN3 | 286183 | 26829 | 0.67 | 0.5 | 0.14 | 5.06322205292649e-110 | 1.70600203851305e-105 |
74 | 11 | NPCc | Nephron progenitor cells c | wk16 | SCG5 | 6447 | 10816 | 0.59 | 0.44 | 0.16 | 4.2520648726779e-68 | 1.43269073820009e-63 |
74 | 11 | NPCc | Nephron progenitor cells c | wk16 | PRXL2A | 84293 | 28651 | 0.59 | 0.73 | 0.53 | 1.32014820898031e-53 | 4.44810737533827e-49 |
74 | 11 | NPCc | Nephron progenitor cells c | wk16 | PAX2 | 5076 | 8616 | 0.58 | 0.6 | 0.34 | 5.57006996293046e-54 | 1.87677937330979e-49 |
74 | 11 | NPCc | Nephron progenitor cells c | wk16 | SIX1 | 6495 | 10887 | 0.57 | 0.42 | 0.14 | 1.11988753207842e-72 | 3.77334905058504e-68 |
74 | 11 | NPCc | Nephron progenitor cells c | wk16 | SEPTIN6 | 23157 | 15848 | 0.54 | 0.53 | 0.28 | 3.82042892343682e-47 | 1.2872553214628e-42 |
74 | 11 | NPCc | Nephron progenitor cells c | wk16 | ECEL1 | 9427 | 3147 | 0.54 | 0.32 | 0.06 | 5.55559997400214e-108 | 1.87190385524028e-103 |
74 | 11 | NPCc | Nephron progenitor cells c | wk16 | MEOX1 | 4222 | 7013 | 0.52 | 0.3 | 0.07 | 9.761653891289e-74 | 3.28909166213091e-69 |
74 | 11 | NPCc | Nephron progenitor cells c | wk16 | PRKAR1A | 5573 | 9388 | 0.52 | 0.53 | 0.36 | 3.50945822496367e-32 | 1.18247685431926e-27 |
74 | 11 | NPCc | Nephron progenitor cells c | wk16 | HOXC6 | 3223 | 5128 | 0.52 | 0.38 | 0.14 | 1.14081329647046e-54 | 3.84385632112756e-50 |
74 | 11 | NPCc | Nephron progenitor cells c | wk16 | NTRK2 | 4915 | 8032 | 0.51 | 0.62 | 0.39 | 1.41832989844357e-37 | 4.77892075981577e-33 |
74 | 11 | NPCc | Nephron progenitor cells c | wk16 | SLC15A1 | 6564 | 10920 | 0.51 | 0.31 | 0.07 | 6.4396515599923e-77 | 2.16977619662381e-72 |
74 | 11 | NPCc | Nephron progenitor cells c | wk16 | MARCKSL1 | 65108 | 7142 | 0.51 | 0.98 | 0.89 | 2.74346549880587e-97 | 9.24383265167649e-93 |
74 | 11 | NPCc | Nephron progenitor cells c | wk16 | EYA1 | 2138 | 3519 | 0.51 | 0.3 | 0.07 | 2.63723203764468e-73 | 8.88588962763999e-69 |
74 | 11 | NPCc | Nephron progenitor cells c | wk16 | UCHL1 | 7345 | 12513 | 0.51 | 0.44 | 0.21 | 7.53256845420329e-44 | 2.53802361495926e-39 |
74 | 11 | NPCc | Nephron progenitor cells c | wk16 | STMN1 | 3925 | 6510 | 0.5 | 0.99 | 0.92 | 2.40924845415694e-87 | 8.11772174143638e-83 |
74 | 11 | NPCc | Nephron progenitor cells c | wk16 | UNC5B-AS1 | 728978 | 45096 | 0.49 | 0.24 | 0.06 | 4.47599703104057e-58 | 1.50814243963881e-53 |
74 | 11 | NPCc | Nephron progenitor cells c | wk16 | RSPO3 | 84870 | 20866 | 0.48 | 0.31 | 0.11 | 4.05389533710217e-44 | 1.36591949488321e-39 |
74 | 11 | NPCc | Nephron progenitor cells c | wk16 | COL2A1 | 1280 | 2200 | 0.48 | 0.38 | 0.15 | 4.83019447999087e-48 | 1.62748572808812e-43 |
74 | 11 | NPCc | Nephron progenitor cells c | wk16 | HOXB9 | 3219 | 5120 | 0.47 | 0.35 | 0.15 | 4.27215170186586e-43 | 1.43945879442668e-38 |
74 | 11 | NPCc | Nephron progenitor cells c | wk16 | ITGA8 | 8516 | 6144 | 0.47 | 0.35 | 0.15 | 6.26102648294812e-41 | 2.10959026316454e-36 |
74 | 11 | NPCc | Nephron progenitor cells c | wk16 | HOXB-AS3 | 404266 | 40283 | 0.47 | 0.33 | 0.13 | 1.50291272829334e-41 | 5.06391414671159e-37 |
74 | 11 | NPCc | Nephron progenitor cells c | wk16 | TUBA1A | 7846 | 20766 | 0.46 | 0.94 | 0.76 | 9.83027372334391e-58 | 3.3122124283435e-53 |
74 | 11 | NPCc | Nephron progenitor cells c | wk16 | ABCA5 | 23461 | 35 | 0.46 | 0.3 | 0.1 | 1.20513586511954e-49 | 4.06058478393377e-45 |
74 | 11 | NPCc | Nephron progenitor cells c | wk16 | HOXB2 | 3212 | 5113 | 0.45 | 0.4 | 0.21 | 3.0705345062064e-33 | 1.03458589652118e-28 |
74 | 11 | NPCc | Nephron progenitor cells c | wk16 | CXXC5 | 51523 | 26943 | 0.45 | 0.76 | 0.55 | 3.25004292803062e-42 | 1.09506946417064e-37 |
74 | 11 | NPCc | Nephron progenitor cells c | wk16 | LAMA4 | 3910 | 6484 | 0.44 | 0.37 | 0.17 | 9.9779801518977e-37 | 3.36198063238041e-32 |
74 | 11 | NPCc | Nephron progenitor cells c | wk16 | HOXA10 | 3206 | 5100 | 0.44 | 0.73 | 0.5 | 4.49398112498749e-42 | 1.51420200025328e-37 |
74 | 11 | NPCc | Nephron progenitor cells c | wk16 | SIX2 | 10736 | 10888 | 0.43 | 0.27 | 0.07 | 6.10308086109757e-57 | 2.05637206533821e-52 |
74 | 11 | NPCc | Nephron progenitor cells c | wk16 | NASP | 4678 | 7644 | 0.42 | 0.7 | 0.54 | 2.06517006751517e-30 | 6.95838402548562e-26 |
74 | 11 | NPCc | Nephron progenitor cells c | wk16 | NR2F1 | 7025 | 7975 | 0.42 | 0.79 | 0.56 | 1.20917844301248e-44 | 4.07420584588624e-40 |
74 | 11 | NPCc | Nephron progenitor cells c | wk16 | HOXA9 | 3205 | 5109 | 0.42 | 0.51 | 0.33 | 3.79328296424526e-26 | 1.2781087619728e-21 |
74 | 11 | NPCc | Nephron progenitor cells c | wk16 | SINHCAF | 58516 | 30702 | 0.42 | 0.75 | 0.51 | 8.06141286690962e-43 | 2.71621245137653e-38 |
74 | 11 | NPCc | Nephron progenitor cells c | wk16 | GINS2 | 51659 | 24575 | 0.42 | 0.33 | 0.19 | 1.41305926340532e-20 | 4.76116188211789e-16 |
74 | 11 | NPCc | Nephron progenitor cells c | wk16 | ELAVL4 | 1996 | 3315 | 0.42 | 0.2 | 0.04 | 5.37527570235455e-59 | 1.81114539515134e-54 |
74 | 11 | NPCc | Nephron progenitor cells c | wk16 | MDK | 4192 | 6972 | 0.41 | 0.99 | 0.89 | 1.7835948113022e-65 | 6.00964435720163e-61 |
74 | 11 | NPCc | Nephron progenitor cells c | wk16 | CENPV | 201161 | 29920 | 0.41 | 0.55 | 0.35 | 2.30314531706515e-31 | 7.76021783131931e-27 |
74 | 11 | NPCc | Nephron progenitor cells c | wk16 | HAS2 | 3037 | 4819 | 0.41 | 0.25 | 0.08 | 7.45131752350361e-45 | 2.51064692636931e-40 |
74 | 11 | NPCc | Nephron progenitor cells c | wk16 | MCM3 | 4172 | 6945 | 0.4 | 0.37 | 0.22 | 2.55096545965872e-20 | 8.5952230197741e-16 |
74 | 11 | NPCc | Nephron progenitor cells c | wk16 | HMGB1 | 3146 | 4983 | 0.39 | 1 | 0.96 | 4.95341261751121e-80 | 1.66900284734423e-75 |
74 | 11 | NPCc | Nephron progenitor cells c | wk16 | C1QTNF4 | 114900 | 14346 | 0.39 | 0.35 | 0.18 | 1.77591709939356e-28 | 5.98377507469665e-24 |
74 | 11 | NPCc | Nephron progenitor cells c | wk16 | COL9A2 | 1298 | 2218 | 0.38 | 0.24 | 0.09 | 1.68589377447738e-30 | 5.6804504837241e-26 |
74 | 11 | NPCc | Nephron progenitor cells c | wk16 | PSIP1 | 11168 | 9527 | 0.38 | 0.7 | 0.52 | 2.84021350032052e-31 | 9.56981536797995e-27 |
74 | 11 | NPCc | Nephron progenitor cells c | wk16 | BEX1 | 55859 | 1036 | 0.37 | 0.53 | 0.37 | 3.05414236912635e-21 | 1.02906272985343e-16 |
74 | 11 | NPCc | Nephron progenitor cells c | wk16 | MMP23B | 8510 | 7171 | 0.37 | 0.51 | 0.31 | 2.12037231458083e-25 | 7.14438247674864e-21 |
74 | 11 | NPCc | Nephron progenitor cells c | wk16 | REC8 | 9985 | 16879 | 0.37 | 0.29 | 0.13 | 2.52975964238749e-28 | 8.52377213906041e-24 |
74 | 11 | NPCc | Nephron progenitor cells c | wk16 | PEG10 | 23089 | 14005 | 0.37 | 0.5 | 0.35 | 9.81002715810726e-21 | 3.30539055065266e-16 |
74 | 11 | NPCc | Nephron progenitor cells c | wk16 | FADS1 | 3992 | 3574 | 0.37 | 0.41 | 0.26 | 4.04678901786696e-21 | 1.36352509168009e-16 |
74 | 11 | NPCc | Nephron progenitor cells c | wk16 | CENPW | 387103 | 21488 | 0.37 | 0.38 | 0.23 | 1.29763556194432e-20 | 4.37225326241518e-16 |
74 | 11 | NPCc | Nephron progenitor cells c | wk16 | DEK | 7913 | 2768 | 0.36 | 0.73 | 0.59 | 7.79281721817564e-25 | 2.6257118334921e-20 |
74 | 11 | NPCc | Nephron progenitor cells c | wk16 | BCL7A | 605 | 1004 | 0.36 | 0.32 | 0.2 | 6.60260016091801e-17 | 2.22468009821971e-12 |
74 | 11 | NPCc | Nephron progenitor cells c | wk16 | PRDX2 | 7001 | 9353 | 0.36 | 0.89 | 0.79 | 4.42525738869497e-37 | 1.49104622454688e-32 |
74 | 11 | NPCc | Nephron progenitor cells c | wk16 | CDH7 | 1005 | 1766 | 0.36 | 0.27 | 0.11 | 3.71149219745405e-30 | 1.25055018101017e-25 |
74 | 11 | NPCc | Nephron progenitor cells c | wk16 | UNG | 7374 | 12572 | 0.35 | 0.31 | 0.17 | 1.60847380340181e-20 | 5.41959163318207e-16 |
74 | 11 | NPCc | Nephron progenitor cells c | wk16 | H2AFY2 | 55506 | 14453 | 0.34 | 0.45 | 0.3 | 2.40807459654159e-21 | 8.11376654558724e-17 |
74 | 11 | NPCc | Nephron progenitor cells c | wk16 | CLTA | 1211 | 2090 | 0.34 | 0.91 | 0.79 | 1.00975509966989e-40 | 3.40226883282774e-36 |
74 | 11 | NPCc | Nephron progenitor cells c | wk16 | DLK1 | 8788 | 2907 | 0.34 | 0.14 | 0.05 | 6.50987803387668e-19 | 2.19343830473441e-14 |
74 | 11 | NPCc | Nephron progenitor cells c | wk16 | PCSK1N | 27344 | 17301 | 0.34 | 0.33 | 0.18 | 1.01709412367844e-22 | 3.42699694032214e-18 |
74 | 11 | NPCc | Nephron progenitor cells c | wk16 | BMPER | 168667 | 24154 | 0.34 | 0.2 | 0.07 | 2.38437115561032e-31 | 8.03390017171341e-27 |
74 | 11 | NPCc | Nephron progenitor cells c | wk16 | MCM7 | 4176 | 6950 | 0.34 | 0.41 | 0.27 | 2.31896988425036e-17 | 7.81353712799315e-13 |
74 | 11 | NPCc | Nephron progenitor cells c | wk16 | WASF3 | 10810 | 12734 | 0.34 | 0.27 | 0.12 | 6.43339657406705e-28 | 2.16766864166615e-23 |
74 | 11 | NPCc | Nephron progenitor cells c | wk16 | UBE2E3 | 10477 | 12479 | 0.33 | 0.76 | 0.63 | 1.29638675623333e-28 | 4.36804553645258e-24 |
74 | 11 | NPCc | Nephron progenitor cells c | wk16 | DDX1 | 1653 | 2734 | 0.33 | 0.49 | 0.36 | 8.16951768767827e-18 | 2.75263728968632e-13 |
74 | 11 | NPCc | Nephron progenitor cells c | wk16 | APEX1 | 328 | 587 | 0.33 | 0.76 | 0.64 | 2.97947454650751e-23 | 1.00390415370024e-18 |
74 | 11 | NPCc | Nephron progenitor cells c | wk16 | IGF2 | 3481 | 5466 | 0.33 | 0.84 | 0.6 | 1.03067567695014e-34 | 3.4727586259158e-30 |
74 | 11 | NPCc | Nephron progenitor cells c | wk16 | NME1 | 4830 | 7849 | 0.33 | 0.59 | 0.46 | 3.16899377491928e-18 | 1.0677607625213e-13 |
74 | 11 | NPCc | Nephron progenitor cells c | wk16 | H3F3A | 3020 | 4764 | 0.33 | 1 | 0.99 | 8.49087087723384e-91 | 2.86091403337517e-86 |
74 | 11 | NPCc | Nephron progenitor cells c | wk16 | CADM1 | 23705 | 5951 | 0.33 | 0.67 | 0.42 | 2.55798435430605e-33 | 8.61887248339879e-29 |
74 | 11 | NPCc | Nephron progenitor cells c | wk16 | ENC1 | 8507 | 3345 | 0.32 | 0.33 | 0.21 | 2.12985549650149e-14 | 7.17633510991212e-10 |
74 | 11 | NPCc | Nephron progenitor cells c | wk16 | HOXC8 | 3224 | 5129 | 0.32 | 0.24 | 0.1 | 2.04065620140484e-25 | 6.87578700501347e-21 |
74 | 11 | NPCc | Nephron progenitor cells c | wk16 | HOXC9 | 3225 | 5130 | 0.32 | 0.36 | 0.21 | 2.07862508494305e-18 | 7.00371936120712e-14 |
74 | 11 | NPCc | Nephron progenitor cells c | wk16 | LTBP1 | 4052 | 6714 | 0.32 | 0.3 | 0.17 | 8.07154625182008e-17 | 2.71962679408826e-12 |
74 | 11 | NPCc | Nephron progenitor cells c | wk16 | RBP1 | 5947 | 9919 | 0.32 | 0.89 | 0.68 | 2.74340731169487e-35 | 9.24363659602469e-31 |
74 | 11 | NPCc | Nephron progenitor cells c | wk16 | SHISA3 | 152573 | 25159 | 0.31 | 0.3 | 0.14 | 2.76721301048306e-25 | 9.32384751752162e-21 |
74 | 11 | NPCc | Nephron progenitor cells c | wk16 | SET | 6418 | 10760 | 0.31 | 0.91 | 0.81 | 3.7088362548118e-28 | 1.24965528769629e-23 |
74 | 11 | NPCc | Nephron progenitor cells c | wk16 | RAB34 | 83871 | 16519 | 0.31 | 0.66 | 0.53 | 3.29662877158677e-21 | 1.11076609829845e-16 |
74 | 11 | NPCc | Nephron progenitor cells c | wk16 | HELLS | 3070 | 4861 | 0.31 | 0.32 | 0.21 | 6.47656971463826e-13 | 2.18221539965022e-08 |
74 | 11 | NPCc | Nephron progenitor cells c | wk16 | SIL1 | 64374 | 24624 | 0.3 | 0.22 | 0.13 | 4.38947939318323e-12 | 1.47899118673916e-07 |
74 | 11 | NPCc | Nephron progenitor cells c | wk16 | PKM | 5315 | 9021 | 0.3 | 0.79 | 0.65 | 1.63299098065898e-25 | 5.50219981023235e-21 |
74 | 11 | NPCc | Nephron progenitor cells c | wk16 | HOMER3 | 9454 | 17514 | 0.3 | 0.29 | 0.17 | 3.17303070431993e-16 | 1.06912096551356e-11 |
74 | 11 | NPCc | Nephron progenitor cells c | wk16 | NLRP1 | 22861 | 14374 | 0.3 | 0.55 | 0.4 | 2.71970346272764e-18 | 9.16376884731451e-14 |
74 | 11 | NPCc | Nephron progenitor cells c | wk16 | DDAH2 | 23564 | 2716 | 0.3 | 0.73 | 0.63 | 1.69632334448246e-18 | 5.7155918768992e-14 |
74 | 11 | NPCc | Nephron progenitor cells c | wk16 | LAPTM4B | 55353 | 13646 | 0.3 | 0.76 | 0.64 | 9.08924042837542e-22 | 3.06252866993681e-17 |
74 | 11 | NPCc | Nephron progenitor cells c | wk16 | CCNI | 10983 | 1595 | 0.3 | 0.95 | 0.9 | 7.54561176623485e-30 | 2.54241842851517e-25 |
74 | 11 | NPCc | Nephron progenitor cells c | wk16 | MEIS2 | 4212 | 7001 | 0.3 | 0.6 | 0.4 | 2.195150082743e-21 | 7.39633868879425e-17 |
74 | 11 | NPCc | Nephron progenitor cells c | wk16 | SMARCC1 | 6599 | 11104 | 0.29 | 0.52 | 0.41 | 4.91490468288859e-14 | 1.65602798385248e-09 |
74 | 11 | NPCc | Nephron progenitor cells c | wk16 | G6PD | 2539 | 4057 | 0.29 | 0.24 | 0.12 | 1.35227411477455e-19 | 4.55635240232136e-15 |
74 | 11 | NPCc | Nephron progenitor cells c | wk16 | CTSB | 1508 | 2527 | 0.29 | 0.48 | 0.39 | 1.08864015750805e-09 | 3.66806414670763e-05 |
74 | 11 | NPCc | Nephron progenitor cells c | wk16 | RPL5 | 6125 | 10360 | 0.29 | 1 | 0.99 | 3.34177840824022e-82 | 1.12597881687246e-77 |
74 | 11 | NPCc | Nephron progenitor cells c | wk16 | CLNS1A | 1207 | 2080 | 0.29 | 0.59 | 0.48 | 6.92512325328832e-15 | 2.33335102896297e-10 |
74 | 11 | NPCc | Nephron progenitor cells c | wk16 | MEAF6 | 64769 | 25674 | 0.29 | 0.47 | 0.4 | 6.93353676268993e-10 | 2.33618587682075e-05 |
74 | 11 | NPCc | Nephron progenitor cells c | wk16 | SALL1 | 6299 | 10524 | 0.28 | 0.2 | 0.09 | 6.31732473011925e-20 | 2.12855939456638e-15 |
74 | 11 | NPCc | Nephron progenitor cells c | wk16 | NAE1 | 8883 | 621 | 0.28 | 0.37 | 0.25 | 6.01186976112348e-13 | 2.02563939731295e-08 |