Marker Genes
Dataset: Single-cell transcriptomics reveals gene expression dynamics of human fetal kidney development
- tissue: Kidney
- ontology: Kidney
- genotype: -
- stage: Fetal
- treatment condition: WT
- cell/nucleus: Cells
- pmid: 30789893
- subset name: wk16
- total genes: Not reported
- clustering: scran
- pseudotime: Monocle 2
- link: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE114530
Rows:100
| dataset id | cluster id | cluster name | cell type name | sample id | gene symbol | entrez geneid | species specific geneid |
avg log fc (?)
|
pct 1 | pct 2 | p value | padj |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 74 | 0 | CnT | Connecting tubule | wk16 | KRT17 | 3872 | 6427 | 1.36 | 0.57 | 0.01 | 1.1818602517873E-219 | 3.9821599323722E-215 |
| 74 | 0 | CnT | Connecting tubule | wk16 | CLDN4 | 1364 | 2046 | 1.35 | 0.85 | 0.14 | 8.2430256081645E-72 | 2.777405048415E-67 |
| 74 | 0 | CnT | Connecting tubule | wk16 | WFDC2 | 10406 | 15939 | 1.25 | 0.95 | 0.3 | 7.0500860891615E-49 | 2.3754560068821E-44 |
| 74 | 0 | CnT | Connecting tubule | wk16 | AKR1B1 | 231 | 381 | 1.18 | 0.81 | 0.33 | 2.9090262218507E-32 | 9.8016729519038E-28 |
| 74 | 0 | CnT | Connecting tubule | wk16 | ALDH1A1 | 216 | 402 | 1.16 | 0.73 | 0.15 | 2.8102375581491E-52 | 9.4688144284275E-48 |
| 74 | 0 | CnT | Connecting tubule | wk16 | TACSTD2 | 4070 | 11530 | 1.12 | 0.63 | 0.08 | 3.4962902133734E-66 | 1.178040024494E-61 |
| 74 | 0 | CnT | Connecting tubule | wk16 | KRT18 | 3875 | 6430 | 1.05 | 0.93 | 0.36 | 8.533479061158E-35 | 2.8752704348666E-30 |
| 74 | 0 | CnT | Connecting tubule | wk16 | KRT8 | 3856 | 6446 | 0.97 | 0.83 | 0.25 | 2.1286978110821E-36 | 7.1724344046601E-32 |
| 74 | 0 | CnT | Connecting tubule | wk16 | CLDN3 | 1365 | 2045 | 0.94 | 0.81 | 0.3 | 3.2032934702732E-26 | 1.0793177018738E-21 |
| 74 | 0 | CnT | Connecting tubule | wk16 | BCAT1 | 586 | 976 | 0.93 | 0.56 | 0.04 | 1.4315473376874E-93 | 4.8234555996038E-89 |
| 74 | 0 | CnT | Connecting tubule | wk16 | HMGA1 | 3159 | 5010 | 0.91 | 0.93 | 0.36 | 1.336437151891E-34 | 4.5029913395815E-30 |
| 74 | 0 | CnT | Connecting tubule | wk16 | ATF3 | 467 | 785 | 0.9 | 0.87 | 0.33 | 1.7749149768022E-28 | 5.9803985228375E-24 |
| 74 | 0 | CnT | Connecting tubule | wk16 | TNFRSF12A | 51330 | 18152 | 0.88 | 0.71 | 0.17 | 3.5780191792649E-39 | 1.2055777822615E-34 |
| 74 | 0 | CnT | Connecting tubule | wk16 | MAFF | 23764 | 6780 | 0.87 | 0.81 | 0.28 | 3.4942065468547E-26 | 1.1773379538972E-21 |
| 74 | 0 | CnT | Connecting tubule | wk16 | GATA3 | 2625 | 4172 | 0.86 | 0.52 | 0.07 | 1.5756124681073E-50 | 5.3088686500407E-46 |
| 74 | 0 | CnT | Connecting tubule | wk16 | DMKN | 93099 | 25063 | 0.8 | 0.72 | 0.2 | 1.7270404550692E-31 | 5.8190901093101E-27 |
| 74 | 0 | CnT | Connecting tubule | wk16 | TSPAN1 | 10103 | 20657 | 0.8 | 0.52 | 0.05 | 3.0349405278081E-74 | 1.0225928614397E-69 |
| 74 | 0 | CnT | Connecting tubule | wk16 | ELF3 | 1999 | 3318 | 0.79 | 0.73 | 0.22 | 3.3781047790405E-27 | 1.1382186242499E-22 |
| 74 | 0 | CnT | Connecting tubule | wk16 | AGR2 | 10551 | 328 | 0.78 | 0.42 | 0.04 | 2.6398766633571E-53 | 8.8948004295155E-49 |
| 74 | 0 | CnT | Connecting tubule | wk16 | LMNA | 4000 | 6636 | 0.76 | 0.88 | 0.45 | 4.5762450385215E-18 | 1.5419200032794E-13 |
| 74 | 0 | CnT | Connecting tubule | wk16 | MYO6 | 4646 | 7605 | 0.75 | 0.63 | 0.17 | 5.8012543284376E-28 | 1.9546746334238E-23 |
| 74 | 0 | CnT | Connecting tubule | wk16 | CRABP1 | 1381 | 2338 | 0.75 | 0.43 | 0.11 | 1.1628619648518E-18 | 3.9181471043716E-14 |
| 74 | 0 | CnT | Connecting tubule | wk16 | EPCAM | 4072 | 11529 | 0.74 | 0.88 | 0.42 | 2.3327820864622E-21 | 7.8600759621256E-17 |
| 74 | 0 | CnT | Connecting tubule | wk16 | MAL | 4118 | 6817 | 0.73 | 0.61 | 0.11 | 1.1968801871827E-38 | 4.0327681026934E-34 |
| 74 | 0 | CnT | Connecting tubule | wk16 | CYTOR | 112597 | 28717 | 0.71 | 0.35 | 0.06 | 3.9304334103209E-27 | 1.3243202332735E-22 |
| 74 | 0 | CnT | Connecting tubule | wk16 | LINC01116 | 375295 | 49259 | 0.7 | 0.51 | 0.07 | 1.1854242637825E-49 | 3.9941685143887E-45 |
| 74 | 0 | CnT | Connecting tubule | wk16 | S100A14 | 57402 | 18901 | 0.69 | 0.46 | 0.04 | 2.6295620732114E-60 | 8.8600464494786E-56 |
| 74 | 0 | CnT | Connecting tubule | wk16 | SCIN | 85477 | 21695 | 0.69 | 0.57 | 0.06 | 8.7220549840749E-68 | 2.9388092063342E-63 |
| 74 | 0 | CnT | Connecting tubule | wk16 | MMP7 | 4316 | 7174 | 0.69 | 0.3 | 0.04 | 1.7831739826018E-29 | 6.0082264169786E-25 |
| 74 | 0 | CnT | Connecting tubule | wk16 | SH3YL1 | 26751 | 29546 | 0.68 | 0.6 | 0.14 | 9.3556436149291E-31 | 3.1522905596142E-26 |
| 74 | 0 | CnT | Connecting tubule | wk16 | MAL2 | 114569 | 13634 | 0.66 | 0.61 | 0.14 | 1.0995336457778E-32 | 3.7047686660836E-28 |
| 74 | 0 | CnT | Connecting tubule | wk16 | STXBP6 | 29091 | 19666 | 0.65 | 0.51 | 0.05 | 8.7362001470858E-65 | 2.9435752775591E-60 |
| 74 | 0 | CnT | Connecting tubule | wk16 | RGS10 | 6001 | 9992 | 0.63 | 0.57 | 0.15 | 3.3602482566559E-23 | 1.1322020475976E-18 |
| 74 | 0 | CnT | Connecting tubule | wk16 | MEST | 4232 | 7028 | 0.63 | 0.9 | 0.76 | 1.5737049197004E-9 | 5.3024413564386E-5 |
| 74 | 0 | CnT | Connecting tubule | wk16 | LIMCH1 | 22998 | 29191 | 0.63 | 0.55 | 0.11 | 4.1228487686891E-32 | 1.3891526641221E-27 |
| 74 | 0 | CnT | Connecting tubule | wk16 | SAT1 | 6303 | 10540 | 0.62 | 0.96 | 0.53 | 2.7911399557246E-20 | 9.4044669668186E-16 |
| 74 | 0 | CnT | Connecting tubule | wk16 | RAB11FIP2 | 22841 | 29152 | 0.61 | 0.51 | 0.1 | 7.552893566377E-31 | 2.5448719582551E-26 |
| 74 | 0 | CnT | Connecting tubule | wk16 | KRT19 | 3880 | 6436 | 0.61 | 0.73 | 0.3 | 4.3154765241585E-15 | 1.45405666005E-10 |
| 74 | 0 | CnT | Connecting tubule | wk16 | TSTD1 | 100131187 | 35410 | 0.61 | 0.82 | 0.4 | 4.4355443992233E-17 | 1.4945123298743E-12 |
| 74 | 0 | CnT | Connecting tubule | wk16 | SOX9 | 6662 | 11204 | 0.6 | 0.46 | 0.07 | 1.6612622103883E-39 | 5.5974568916822E-35 |
| 74 | 0 | CnT | Connecting tubule | wk16 | TUBB2B | 347733 | 30829 | 0.6 | 0.77 | 0.31 | 6.370684362331E-19 | 2.1465383890438E-14 |
| 74 | 0 | CnT | Connecting tubule | wk16 | EMX2 | 2018 | 3341 | 0.6 | 0.66 | 0.21 | 4.1319567353428E-21 | 1.3922215024064E-16 |
| 74 | 0 | CnT | Connecting tubule | wk16 | RDH10 | 157506 | 19975 | 0.59 | 0.55 | 0.09 | 3.4844001660913E-39 | 1.1740337919628E-34 |
| 74 | 0 | CnT | Connecting tubule | wk16 | CNKSR3 | 154043 | 23034 | 0.58 | 0.57 | 0.2 | 1.4440697181807E-15 | 4.8656485084381E-11 |
| 74 | 0 | CnT | Connecting tubule | wk16 | KLF5 | 688 | 6349 | 0.57 | 0.46 | 0.08 | 3.60894502638E-34 | 1.2159979371885E-29 |
| 74 | 0 | CnT | Connecting tubule | wk16 | KLF6 | 1316 | 2235 | 0.57 | 0.87 | 0.5 | 4.3749633505662E-14 | 1.4741001513398E-9 |
| 74 | 0 | CnT | Connecting tubule | wk16 | PHLDA1 | 22822 | 8933 | 0.57 | 0.7 | 0.26 | 1.4607675642183E-18 | 4.9219102308773E-14 |
| 74 | 0 | CnT | Connecting tubule | wk16 | TESC | 54997 | 26065 | 0.56 | 0.45 | 0.08 | 6.199122600747E-29 | 2.0887323690957E-24 |
| 74 | 0 | CnT | Connecting tubule | wk16 | CYBA | 1535 | 2577 | 0.56 | 0.86 | 0.44 | 2.0635401900381E-14 | 6.9528923163143E-10 |
| 74 | 0 | CnT | Connecting tubule | wk16 | CLDN7 | 1366 | 2049 | 0.56 | 0.58 | 0.13 | 8.2622633728382E-31 | 2.7838870208441E-26 |
| 74 | 0 | CnT | Connecting tubule | wk16 | PCP4 | 5121 | 8742 | 0.55 | 0.43 | 0.11 | 3.9340511120026E-18 | 1.3255391816782E-13 |
| 74 | 0 | CnT | Connecting tubule | wk16 | GGCT | 79017 | 21705 | 0.53 | 0.72 | 0.3 | 5.0026018490594E-17 | 1.6855766670221E-12 |
| 74 | 0 | CnT | Connecting tubule | wk16 | GSTM3 | 2947 | 4635 | 0.52 | 0.73 | 0.28 | 1.1092053068717E-16 | 3.7373563609735E-12 |
| 74 | 0 | CnT | Connecting tubule | wk16 | TFAP2A | 7020 | 11742 | 0.52 | 0.37 | 0.03 | 5.8433652336946E-65 | 1.968863481841E-60 |
| 74 | 0 | CnT | Connecting tubule | wk16 | TBC1D9 | 23158 | 21710 | 0.52 | 0.37 | 0.04 | 1.9158719008959E-41 | 6.4553387828785E-37 |
| 74 | 0 | CnT | Connecting tubule | wk16 | CREB5 | 9586 | 16844 | 0.52 | 0.41 | 0.09 | 1.1572126085716E-20 | 3.8991121633211E-16 |
| 74 | 0 | CnT | Connecting tubule | wk16 | ZFP36 | 7538 | 12862 | 0.52 | 0.71 | 0.26 | 6.7943806201035E-17 | 2.2892986061377E-12 |
| 74 | 0 | CnT | Connecting tubule | wk16 | ANXA3 | 306 | 541 | 0.51 | 0.36 | 0.05 | 3.9486965103885E-35 | 1.3304738022103E-30 |
| 74 | 0 | CnT | Connecting tubule | wk16 | MCL1 | 4170 | 6943 | 0.49 | 0.83 | 0.43 | 4.0224412201234E-12 | 1.3553213447084E-7 |
| 74 | 0 | CnT | Connecting tubule | wk16 | KCTD12 | 115207 | 14678 | 0.49 | 0.36 | 0.08 | 4.2246795406084E-20 | 1.4234635244126E-15 |
| 74 | 0 | CnT | Connecting tubule | wk16 | HOXB8 | 3218 | 5119 | 0.49 | 0.4 | 0.09 | 3.5137636762037E-21 | 1.1839275330601E-16 |
| 74 | 0 | CnT | Connecting tubule | wk16 | STK17A | 9263 | 11395 | 0.48 | 0.38 | 0.08 | 3.8195023816854E-22 | 1.2869431324851E-17 |
| 74 | 0 | CnT | Connecting tubule | wk16 | RAB25 | 57111 | 18238 | 0.48 | 0.4 | 0.06 | 6.6671250015015E-30 | 2.2464210980059E-25 |
| 74 | 0 | CnT | Connecting tubule | wk16 | PODXL2 | 50512 | 17936 | 0.48 | 0.52 | 0.16 | 7.1692625525304E-17 | 2.4156113244496E-12 |
| 74 | 0 | CnT | Connecting tubule | wk16 | YPEL5 | 51646 | 18329 | 0.48 | 0.81 | 0.41 | 7.0832211282186E-11 | 2.386620526942E-6 |
| 74 | 0 | CnT | Connecting tubule | wk16 | NEDD9 | 4739 | 7733 | 0.47 | 0.48 | 0.13 | 1.0908423817176E-19 | 3.6754843209594E-15 |
| 74 | 0 | CnT | Connecting tubule | wk16 | MECOM | 2122 | 3498 | 0.47 | 0.42 | 0.07 | 1.2020594803546E-30 | 4.0502192131067E-26 |
| 74 | 0 | CnT | Connecting tubule | wk16 | LINC00645 | 100505967 | 44299 | 0.47 | 0.31 | 0.01 | 3.4756825980305E-97 | 1.1710964945804E-92 |
| 74 | 0 | CnT | Connecting tubule | wk16 | PCDH7 | 5099 | 8659 | 0.46 | 0.37 | 0.04 | 1.0117384717885E-42 | 3.4089516068441E-38 |
| 74 | 0 | CnT | Connecting tubule | wk16 | SPINT1-AS1 | 102724362 | 53162 | 0.46 | 0.46 | 0.09 | 8.5582697964236E-29 | 2.883623425207E-24 |
| 74 | 0 | CnT | Connecting tubule | wk16 | PRPS2 | 5634 | 9465 | 0.46 | 0.46 | 0.09 | 1.4351301144635E-25 | 4.8355274076732E-21 |
| 74 | 0 | CnT | Connecting tubule | wk16 | RPLP1 | 6176 | 10372 | 0.46 | 1 | 1 | 2.7349439305642E-34 | 9.2151200796429E-30 |
| 74 | 0 | CnT | Connecting tubule | wk16 | PLEKHA1 | 59338 | 14335 | 0.45 | 0.68 | 0.23 | 1.1515704379782E-18 | 3.8801014337237E-14 |
| 74 | 0 | CnT | Connecting tubule | wk16 | GPRC5A | 9052 | 9836 | 0.45 | 0.31 | 0.03 | 5.860805544094E-35 | 1.974739820027E-30 |
| 74 | 0 | CnT | Connecting tubule | wk16 | HELLS | 3070 | 4861 | 0.44 | 0.55 | 0.22 | 5.5646064142417E-12 | 1.8749384852146E-7 |
| 74 | 0 | CnT | Connecting tubule | wk16 | TGM2 | 7052 | 11778 | 0.44 | 0.33 | 0.03 | 3.0988123320968E-41 | 1.0441138271767E-36 |
| 74 | 0 | CnT | Connecting tubule | wk16 | NFKBIA | 4792 | 7797 | 0.44 | 0.88 | 0.51 | 1.7106999658366E-11 | 5.7640324648898E-7 |
| 74 | 0 | CnT | Connecting tubule | wk16 | MLF1 | 4291 | 7125 | 0.44 | 0.57 | 0.26 | 7.6987790768372E-10 | 2.5940266221495E-5 |
| 74 | 0 | CnT | Connecting tubule | wk16 | MIR4435-2HG | 541471 | 35163 | 0.44 | 0.32 | 0.04 | 6.3014194921977E-34 | 2.1232002837011E-29 |
| 74 | 0 | CnT | Connecting tubule | wk16 | LRATD2 | 157638 | 24166 | 0.43 | 0.41 | 0.09 | 4.4332415242994E-22 | 1.4937363991974E-17 |
| 74 | 0 | CnT | Connecting tubule | wk16 | TPD52 | 7163 | 12005 | 0.43 | 0.48 | 0.11 | 4.2304832679458E-24 | 1.4254190323016E-19 |
| 74 | 0 | CnT | Connecting tubule | wk16 | LHX1-DT | 102723471 | 53778 | 0.43 | 0.53 | 0.16 | 2.9388037686383E-18 | 9.90200541805E-14 |
| 74 | 0 | CnT | Connecting tubule | wk16 | MUC6 | 4588 | 7517 | 0.42 | 0.25 | 0.004 | 3.5911300082974E-143 | 1.2099953449957E-138 |
| 74 | 0 | CnT | Connecting tubule | wk16 | REL | 5966 | 9954 | 0.42 | 0.61 | 0.22 | 9.1535202351118E-15 | 3.0841871080186E-10 |
| 74 | 0 | CnT | Connecting tubule | wk16 | TRIB1 | 10221 | 16891 | 0.42 | 0.52 | 0.17 | 2.2842421404352E-15 | 7.6965254679825E-11 |
| 74 | 0 | CnT | Connecting tubule | wk16 | PLP2 | 5355 | 9087 | 0.42 | 0.37 | 0.1 | 9.2013998496542E-14 | 3.1003196653425E-9 |
| 74 | 0 | CnT | Connecting tubule | wk16 | RET | 5979 | 9967 | 0.42 | 0.28 | 0.007 | 2.5412834788084E-139 | 8.562600553497E-135 |
| 74 | 0 | CnT | Connecting tubule | wk16 | TGIF1 | 7050 | 11776 | 0.42 | 0.66 | 0.31 | 7.712352273529E-11 | 2.5985999750429E-6 |
| 74 | 0 | CnT | Connecting tubule | wk16 | ENO1 | 2023 | 3350 | 0.42 | 0.91 | 0.67 | 2.1183365521125E-8 | 0.00071375231786878 |
| 74 | 0 | CnT | Connecting tubule | wk16 | SPINT1 | 6692 | 11246 | 0.42 | 0.43 | 0.09 | 5.7417230080683E-24 | 1.9346161503385E-19 |
| 74 | 0 | CnT | Connecting tubule | wk16 | ANKRD28 | 23243 | 29024 | 0.42 | 0.31 | 0.08 | 4.5673477058068E-12 | 1.5389221359946E-7 |
| 74 | 0 | CnT | Connecting tubule | wk16 | CKS2 | 1164 | 2000 | 0.42 | 0.73 | 0.38 | 2.7487441837539E-9 | 9.2616186527405E-5 |
| 74 | 0 | CnT | Connecting tubule | wk16 | RAB32 | 10981 | 9772 | 0.41 | 0.42 | 0.15 | 1.1118378078228E-10 | 3.7462263096781E-6 |
| 74 | 0 | CnT | Connecting tubule | wk16 | CTSH | 1512 | 2535 | 0.41 | 0.52 | 0.12 | 7.0226332274171E-25 | 2.3662060396459E-20 |
| 74 | 0 | CnT | Connecting tubule | wk16 | RPS3 | 6188 | 10420 | 0.41 | 1 | 0.99 | 1.7009321175836E-28 | 5.731120676986E-24 |
| 74 | 0 | CnT | Connecting tubule | wk16 | ETV4 | 2118 | 3493 | 0.41 | 0.45 | 0.09 | 2.070941100501E-23 | 6.9778289440281E-19 |
| 74 | 0 | CnT | Connecting tubule | wk16 | CEBPB | 1051 | 1834 | 0.4 | 0.5 | 0.16 | 1.6246305547569E-14 | 5.4740301911978E-10 |
| 74 | 0 | CnT | Connecting tubule | wk16 | SNHG8 | 100093630 | 33098 | 0.4 | 0.85 | 0.55 | 3.1849115728262E-8 | 0.0010731241053481 |
| 74 | 0 | CnT | Connecting tubule | wk16 | ANXA11 | 311 | 535 | 0.4 | 0.48 | 0.18 | 8.5459698069088E-12 | 2.8794790667398E-7 |
| 74 | 0 | CnT | Connecting tubule | wk16 | HSPH1 | 10808 | 16969 | 0.4 | 0.75 | 0.41 | 4.2843742715138E-8 | 0.0014435770670438 |