Marker Genes
Dataset: Single-cell transcriptomics reveals gene expression dynamics of human fetal kidney development
- tissue: Kidney
- ontology: Kidney
- genotype: -
- stage: Fetal
- treatment condition: WT
- cell/nucleus: Cells
- pmid: 30789893
- subset name: wk16
- total genes: Not reported
- clustering: scran
- pseudotime: Monocle 2
- link: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE114530
Rows:100
dataset id | cluster id | cluster name | cell type name | sample id | gene symbol | entrez geneid | species specific geneid |
avg log fc (?)
|
pct 1 | pct 2 | p value | padj |
---|---|---|---|---|---|---|---|---|---|---|---|---|
74 | 0 | CnT | Connecting tubule | wk16 | KRT17 | 3872 | 6427 | 1.36 | 0.57 | 0.01 | 1.18186025178733e-219 | 3.98215993237224e-215 |
74 | 0 | CnT | Connecting tubule | wk16 | CLDN4 | 1364 | 2046 | 1.35 | 0.85 | 0.14 | 8.24302560816452e-72 | 2.77740504841495e-67 |
74 | 0 | CnT | Connecting tubule | wk16 | WFDC2 | 10406 | 15939 | 1.25 | 0.95 | 0.3 | 7.05008608916147e-49 | 2.37545600688207e-44 |
74 | 0 | CnT | Connecting tubule | wk16 | AKR1B1 | 231 | 381 | 1.18 | 0.81 | 0.33 | 2.90902622185071e-32 | 9.80167295190378e-28 |
74 | 0 | CnT | Connecting tubule | wk16 | ALDH1A1 | 216 | 402 | 1.16 | 0.73 | 0.15 | 2.81023755814909e-52 | 9.46881442842753e-48 |
74 | 0 | CnT | Connecting tubule | wk16 | TACSTD2 | 4070 | 11530 | 1.12 | 0.63 | 0.08 | 3.49629021337341e-66 | 1.17804002449404e-61 |
74 | 0 | CnT | Connecting tubule | wk16 | KRT18 | 3875 | 6430 | 1.05 | 0.93 | 0.36 | 8.53347906115798e-35 | 2.87527043486657e-30 |
74 | 0 | CnT | Connecting tubule | wk16 | KRT8 | 3856 | 6446 | 0.97 | 0.83 | 0.25 | 2.12869781108213e-36 | 7.17243440466014e-32 |
74 | 0 | CnT | Connecting tubule | wk16 | CLDN3 | 1365 | 2045 | 0.94 | 0.81 | 0.3 | 3.20329347027317e-26 | 1.07931770187384e-21 |
74 | 0 | CnT | Connecting tubule | wk16 | BCAT1 | 586 | 976 | 0.93 | 0.56 | 0.04 | 1.43154733768736e-93 | 4.8234555996038e-89 |
74 | 0 | CnT | Connecting tubule | wk16 | HMGA1 | 3159 | 5010 | 0.91 | 0.93 | 0.36 | 1.336437151891e-34 | 4.50299133958152e-30 |
74 | 0 | CnT | Connecting tubule | wk16 | ATF3 | 467 | 785 | 0.9 | 0.87 | 0.33 | 1.77491497680224e-28 | 5.98039852283747e-24 |
74 | 0 | CnT | Connecting tubule | wk16 | TNFRSF12A | 51330 | 18152 | 0.88 | 0.71 | 0.17 | 3.57801917926489e-39 | 1.20557778226151e-34 |
74 | 0 | CnT | Connecting tubule | wk16 | MAFF | 23764 | 6780 | 0.87 | 0.81 | 0.28 | 3.49420654685473e-26 | 1.17733795389723e-21 |
74 | 0 | CnT | Connecting tubule | wk16 | GATA3 | 2625 | 4172 | 0.86 | 0.52 | 0.07 | 1.57561246810729e-50 | 5.3088686500407e-46 |
74 | 0 | CnT | Connecting tubule | wk16 | DMKN | 93099 | 25063 | 0.8 | 0.72 | 0.2 | 1.72704045506918e-31 | 5.8190901093101e-27 |
74 | 0 | CnT | Connecting tubule | wk16 | TSPAN1 | 10103 | 20657 | 0.8 | 0.52 | 0.05 | 3.0349405278081e-74 | 1.02259286143966e-69 |
74 | 0 | CnT | Connecting tubule | wk16 | ELF3 | 1999 | 3318 | 0.79 | 0.73 | 0.22 | 3.37810477904052e-27 | 1.13821862424991e-22 |
74 | 0 | CnT | Connecting tubule | wk16 | AGR2 | 10551 | 328 | 0.78 | 0.42 | 0.04 | 2.63987666335712e-53 | 8.89480042951548e-49 |
74 | 0 | CnT | Connecting tubule | wk16 | LMNA | 4000 | 6636 | 0.76 | 0.88 | 0.45 | 4.5762450385215e-18 | 1.54192000327943e-13 |
74 | 0 | CnT | Connecting tubule | wk16 | MYO6 | 4646 | 7605 | 0.75 | 0.63 | 0.17 | 5.80125432843758e-28 | 1.95467463342376e-23 |
74 | 0 | CnT | Connecting tubule | wk16 | CRABP1 | 1381 | 2338 | 0.75 | 0.43 | 0.11 | 1.16286196485177e-18 | 3.91814710437157e-14 |
74 | 0 | CnT | Connecting tubule | wk16 | EPCAM | 4072 | 11529 | 0.74 | 0.88 | 0.42 | 2.33278208646216e-21 | 7.86007596212559e-17 |
74 | 0 | CnT | Connecting tubule | wk16 | MAL | 4118 | 6817 | 0.73 | 0.61 | 0.11 | 1.19688018718271e-38 | 4.03276810269341e-34 |
74 | 0 | CnT | Connecting tubule | wk16 | CYTOR | 112597 | 28717 | 0.71 | 0.35 | 0.06 | 3.9304334103209e-27 | 1.32432023327352e-22 |
74 | 0 | CnT | Connecting tubule | wk16 | LINC01116 | 375295 | 49259 | 0.7 | 0.51 | 0.07 | 1.18542426378248e-49 | 3.9941685143887e-45 |
74 | 0 | CnT | Connecting tubule | wk16 | S100A14 | 57402 | 18901 | 0.69 | 0.46 | 0.04 | 2.62956207321143e-60 | 8.86004644947858e-56 |
74 | 0 | CnT | Connecting tubule | wk16 | SCIN | 85477 | 21695 | 0.69 | 0.57 | 0.06 | 8.72205498407491e-68 | 2.9388092063342e-63 |
74 | 0 | CnT | Connecting tubule | wk16 | MMP7 | 4316 | 7174 | 0.69 | 0.3 | 0.04 | 1.78317398260184e-29 | 6.00822641697865e-25 |
74 | 0 | CnT | Connecting tubule | wk16 | SH3YL1 | 26751 | 29546 | 0.68 | 0.6 | 0.14 | 9.35564361492907e-31 | 3.1522905596142e-26 |
74 | 0 | CnT | Connecting tubule | wk16 | MAL2 | 114569 | 13634 | 0.66 | 0.61 | 0.14 | 1.09953364577777e-32 | 3.70476866608361e-28 |
74 | 0 | CnT | Connecting tubule | wk16 | STXBP6 | 29091 | 19666 | 0.65 | 0.51 | 0.05 | 8.73620014708583e-65 | 2.9435752775591e-60 |
74 | 0 | CnT | Connecting tubule | wk16 | RGS10 | 6001 | 9992 | 0.63 | 0.57 | 0.15 | 3.36024825665587e-23 | 1.13220204759763e-18 |
74 | 0 | CnT | Connecting tubule | wk16 | MEST | 4232 | 7028 | 0.63 | 0.9 | 0.76 | 1.57370491970042e-09 | 5.30244135643859e-05 |
74 | 0 | CnT | Connecting tubule | wk16 | LIMCH1 | 22998 | 29191 | 0.63 | 0.55 | 0.11 | 4.12284876868915e-32 | 1.38915266412212e-27 |
74 | 0 | CnT | Connecting tubule | wk16 | SAT1 | 6303 | 10540 | 0.62 | 0.96 | 0.53 | 2.79113995572463e-20 | 9.40446696681858e-16 |
74 | 0 | CnT | Connecting tubule | wk16 | RAB11FIP2 | 22841 | 29152 | 0.61 | 0.51 | 0.1 | 7.55289356637701e-31 | 2.54487195825507e-26 |
74 | 0 | CnT | Connecting tubule | wk16 | KRT19 | 3880 | 6436 | 0.61 | 0.73 | 0.3 | 4.31547652415853e-15 | 1.45405666004998e-10 |
74 | 0 | CnT | Connecting tubule | wk16 | TSTD1 | 100131187 | 35410 | 0.61 | 0.82 | 0.4 | 4.43554439922325e-17 | 1.49451232987428e-12 |
74 | 0 | CnT | Connecting tubule | wk16 | SOX9 | 6662 | 11204 | 0.6 | 0.46 | 0.07 | 1.66126221038827e-39 | 5.59745689168223e-35 |
74 | 0 | CnT | Connecting tubule | wk16 | TUBB2B | 347733 | 30829 | 0.6 | 0.77 | 0.31 | 6.370684362331e-19 | 2.14653838904381e-14 |
74 | 0 | CnT | Connecting tubule | wk16 | EMX2 | 2018 | 3341 | 0.6 | 0.66 | 0.21 | 4.13195673534278e-21 | 1.39222150240639e-16 |
74 | 0 | CnT | Connecting tubule | wk16 | RDH10 | 157506 | 19975 | 0.59 | 0.55 | 0.09 | 3.48440016609133e-39 | 1.17403379196281e-34 |
74 | 0 | CnT | Connecting tubule | wk16 | CNKSR3 | 154043 | 23034 | 0.58 | 0.57 | 0.2 | 1.44406971818071e-15 | 4.86564850843808e-11 |
74 | 0 | CnT | Connecting tubule | wk16 | KLF5 | 688 | 6349 | 0.57 | 0.46 | 0.08 | 3.60894502637996e-34 | 1.21599793718846e-29 |
74 | 0 | CnT | Connecting tubule | wk16 | KLF6 | 1316 | 2235 | 0.57 | 0.87 | 0.5 | 4.37496335056616e-14 | 1.47410015133976e-09 |
74 | 0 | CnT | Connecting tubule | wk16 | PHLDA1 | 22822 | 8933 | 0.57 | 0.7 | 0.26 | 1.46076756421834e-18 | 4.92191023087727e-14 |
74 | 0 | CnT | Connecting tubule | wk16 | TESC | 54997 | 26065 | 0.56 | 0.45 | 0.08 | 6.19912260074698e-29 | 2.08873236909569e-24 |
74 | 0 | CnT | Connecting tubule | wk16 | CYBA | 1535 | 2577 | 0.56 | 0.86 | 0.44 | 2.06354019003806e-14 | 6.95289231631425e-10 |
74 | 0 | CnT | Connecting tubule | wk16 | CLDN7 | 1366 | 2049 | 0.56 | 0.58 | 0.13 | 8.26226337283821e-31 | 2.78388702084411e-26 |
74 | 0 | CnT | Connecting tubule | wk16 | PCP4 | 5121 | 8742 | 0.55 | 0.43 | 0.11 | 3.9340511120026e-18 | 1.32553918167816e-13 |
74 | 0 | CnT | Connecting tubule | wk16 | GGCT | 79017 | 21705 | 0.53 | 0.72 | 0.3 | 5.00260184905943e-17 | 1.68557666702208e-12 |
74 | 0 | CnT | Connecting tubule | wk16 | GSTM3 | 2947 | 4635 | 0.52 | 0.73 | 0.28 | 1.10920530687169e-16 | 3.73735636097348e-12 |
74 | 0 | CnT | Connecting tubule | wk16 | TFAP2A | 7020 | 11742 | 0.52 | 0.37 | 0.03 | 5.84336523369457e-65 | 1.96886348184105e-60 |
74 | 0 | CnT | Connecting tubule | wk16 | TBC1D9 | 23158 | 21710 | 0.52 | 0.37 | 0.04 | 1.91587190089586e-41 | 6.45533878287851e-37 |
74 | 0 | CnT | Connecting tubule | wk16 | CREB5 | 9586 | 16844 | 0.52 | 0.41 | 0.09 | 1.15721260857158e-20 | 3.8991121633211e-16 |
74 | 0 | CnT | Connecting tubule | wk16 | ZFP36 | 7538 | 12862 | 0.52 | 0.71 | 0.26 | 6.79438062010352e-17 | 2.28929860613768e-12 |
74 | 0 | CnT | Connecting tubule | wk16 | ANXA3 | 306 | 541 | 0.51 | 0.36 | 0.05 | 3.94869651038855e-35 | 1.33047380221032e-30 |
74 | 0 | CnT | Connecting tubule | wk16 | MCL1 | 4170 | 6943 | 0.49 | 0.83 | 0.43 | 4.02244122012337e-12 | 1.35532134470837e-07 |
74 | 0 | CnT | Connecting tubule | wk16 | KCTD12 | 115207 | 14678 | 0.49 | 0.36 | 0.08 | 4.2246795406084e-20 | 1.4234635244126e-15 |
74 | 0 | CnT | Connecting tubule | wk16 | HOXB8 | 3218 | 5119 | 0.49 | 0.4 | 0.09 | 3.51376367620372e-21 | 1.18392753306008e-16 |
74 | 0 | CnT | Connecting tubule | wk16 | STK17A | 9263 | 11395 | 0.48 | 0.38 | 0.08 | 3.81950238168538e-22 | 1.28694313248507e-17 |
74 | 0 | CnT | Connecting tubule | wk16 | RAB25 | 57111 | 18238 | 0.48 | 0.4 | 0.06 | 6.66712500150146e-30 | 2.2464210980059e-25 |
74 | 0 | CnT | Connecting tubule | wk16 | PODXL2 | 50512 | 17936 | 0.48 | 0.52 | 0.16 | 7.16926255253043e-17 | 2.4156113244496e-12 |
74 | 0 | CnT | Connecting tubule | wk16 | YPEL5 | 51646 | 18329 | 0.48 | 0.81 | 0.41 | 7.08322112821859e-11 | 2.38662052694197e-06 |
74 | 0 | CnT | Connecting tubule | wk16 | NEDD9 | 4739 | 7733 | 0.47 | 0.48 | 0.13 | 1.09084238171763e-19 | 3.67548432095937e-15 |
74 | 0 | CnT | Connecting tubule | wk16 | MECOM | 2122 | 3498 | 0.47 | 0.42 | 0.07 | 1.20205948035457e-30 | 4.05021921310667e-26 |
74 | 0 | CnT | Connecting tubule | wk16 | LINC00645 | 100505967 | 44299 | 0.47 | 0.31 | 0.01 | 3.47568259803051e-97 | 1.1710964945804e-92 |
74 | 0 | CnT | Connecting tubule | wk16 | PCDH7 | 5099 | 8659 | 0.46 | 0.37 | 0.04 | 1.01173847178848e-42 | 3.40895160684411e-38 |
74 | 0 | CnT | Connecting tubule | wk16 | SPINT1-AS1 | 102724362 | 53162 | 0.46 | 0.46 | 0.09 | 8.55826979642357e-29 | 2.88362342520696e-24 |
74 | 0 | CnT | Connecting tubule | wk16 | PRPS2 | 5634 | 9465 | 0.46 | 0.46 | 0.09 | 1.43513011446347e-25 | 4.83552740767321e-21 |
74 | 0 | CnT | Connecting tubule | wk16 | RPLP1 | 6176 | 10372 | 0.46 | 1 | 1 | 2.73494393056417e-34 | 9.21512007964292e-30 |
74 | 0 | CnT | Connecting tubule | wk16 | PLEKHA1 | 59338 | 14335 | 0.45 | 0.68 | 0.23 | 1.1515704379782e-18 | 3.88010143372374e-14 |
74 | 0 | CnT | Connecting tubule | wk16 | GPRC5A | 9052 | 9836 | 0.45 | 0.31 | 0.03 | 5.86080554409404e-35 | 1.97473982002705e-30 |
74 | 0 | CnT | Connecting tubule | wk16 | HELLS | 3070 | 4861 | 0.44 | 0.55 | 0.22 | 5.56460641424174e-12 | 1.87493848521461e-07 |
74 | 0 | CnT | Connecting tubule | wk16 | TGM2 | 7052 | 11778 | 0.44 | 0.33 | 0.03 | 3.09881233209678e-41 | 1.04411382717669e-36 |
74 | 0 | CnT | Connecting tubule | wk16 | NFKBIA | 4792 | 7797 | 0.44 | 0.88 | 0.51 | 1.71069996583659e-11 | 5.76403246488981e-07 |
74 | 0 | CnT | Connecting tubule | wk16 | MLF1 | 4291 | 7125 | 0.44 | 0.57 | 0.26 | 7.69877907683721e-10 | 2.59402662214953e-05 |
74 | 0 | CnT | Connecting tubule | wk16 | MIR4435-2HG | 541471 | 35163 | 0.44 | 0.32 | 0.04 | 6.30141949219768e-34 | 2.12320028370109e-29 |
74 | 0 | CnT | Connecting tubule | wk16 | LRATD2 | 157638 | 24166 | 0.43 | 0.41 | 0.09 | 4.43324152429938e-22 | 1.49373639919743e-17 |
74 | 0 | CnT | Connecting tubule | wk16 | TPD52 | 7163 | 12005 | 0.43 | 0.48 | 0.11 | 4.23048326794576e-24 | 1.42541903230164e-19 |
74 | 0 | CnT | Connecting tubule | wk16 | LHX1-DT | 102723471 | 53778 | 0.43 | 0.53 | 0.16 | 2.93880376863834e-18 | 9.90200541805001e-14 |
74 | 0 | CnT | Connecting tubule | wk16 | MUC6 | 4588 | 7517 | 0.42 | 0.25 | 0.004 | 3.59113000829741e-143 | 1.20999534499573e-138 |
74 | 0 | CnT | Connecting tubule | wk16 | REL | 5966 | 9954 | 0.42 | 0.61 | 0.22 | 9.15352023511181e-15 | 3.08418710801857e-10 |
74 | 0 | CnT | Connecting tubule | wk16 | TRIB1 | 10221 | 16891 | 0.42 | 0.52 | 0.17 | 2.28424214043523e-15 | 7.69652546798246e-11 |
74 | 0 | CnT | Connecting tubule | wk16 | PLP2 | 5355 | 9087 | 0.42 | 0.37 | 0.1 | 9.20139984965423e-14 | 3.10031966534249e-09 |
74 | 0 | CnT | Connecting tubule | wk16 | RET | 5979 | 9967 | 0.42 | 0.28 | 0.007 | 2.54128347880841e-139 | 8.56260055349705e-135 |
74 | 0 | CnT | Connecting tubule | wk16 | TGIF1 | 7050 | 11776 | 0.42 | 0.66 | 0.31 | 7.71235227352903e-11 | 2.59859997504287e-06 |
74 | 0 | CnT | Connecting tubule | wk16 | ENO1 | 2023 | 3350 | 0.42 | 0.91 | 0.67 | 2.11833655211247e-08 | 0.000713752317868775 |
74 | 0 | CnT | Connecting tubule | wk16 | SPINT1 | 6692 | 11246 | 0.42 | 0.43 | 0.09 | 5.74172300806826e-24 | 1.93461615033852e-19 |
74 | 0 | CnT | Connecting tubule | wk16 | ANKRD28 | 23243 | 29024 | 0.42 | 0.31 | 0.08 | 4.56734770580685e-12 | 1.53892213599456e-07 |
74 | 0 | CnT | Connecting tubule | wk16 | CKS2 | 1164 | 2000 | 0.42 | 0.73 | 0.38 | 2.74874418375394e-09 | 9.26161865274054e-05 |
74 | 0 | CnT | Connecting tubule | wk16 | RAB32 | 10981 | 9772 | 0.41 | 0.42 | 0.15 | 1.1118378078228e-10 | 3.74622630967814e-06 |
74 | 0 | CnT | Connecting tubule | wk16 | CTSH | 1512 | 2535 | 0.41 | 0.52 | 0.12 | 7.02263322741714e-25 | 2.36620603964593e-20 |
74 | 0 | CnT | Connecting tubule | wk16 | RPS3 | 6188 | 10420 | 0.41 | 1 | 0.99 | 1.70093211758355e-28 | 5.73112067698603e-24 |
74 | 0 | CnT | Connecting tubule | wk16 | ETV4 | 2118 | 3493 | 0.41 | 0.45 | 0.09 | 2.070941100501e-23 | 6.97782894402808e-19 |
74 | 0 | CnT | Connecting tubule | wk16 | CEBPB | 1051 | 1834 | 0.4 | 0.5 | 0.16 | 1.62463055475687e-14 | 5.47403019119778e-10 |
74 | 0 | CnT | Connecting tubule | wk16 | SNHG8 | 100093630 | 33098 | 0.4 | 0.85 | 0.55 | 3.18491157282622e-08 | 0.00107312410534807 |
74 | 0 | CnT | Connecting tubule | wk16 | ANXA11 | 311 | 535 | 0.4 | 0.48 | 0.18 | 8.54596980690876e-12 | 2.87947906673984e-07 |
74 | 0 | CnT | Connecting tubule | wk16 | HSPH1 | 10808 | 16969 | 0.4 | 0.75 | 0.41 | 4.28437427151378e-08 | 0.00144357706704385 |