Marker Genes
Dataset: Single-cell transcriptomics reveals gene expression dynamics of human fetal kidney development
- tissue: Kidney
- ontology: Kidney
- genotype: -
- stage: Fetal
- treatment condition: WT
- cell/nucleus: Cells
- pmid: 30789893
- subset name: wk13
- total genes: Not reported
- clustering: scran
- pseudotime: Monocle 2
- link: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE114530
Rows:100
dataset id | cluster id | cluster name | cell type name | sample id | gene symbol | entrez geneid | species specific geneid |
avg log fc (?)
|
pct 1 | pct 2 | p value | padj |
---|---|---|---|---|---|---|---|---|---|---|---|---|
73 | 9 | NPCa | Nephron progenitor cells a | wk13 | TMEM100 | 55273 | 25607 | 1.86 | 0.81 | 0.11 | 1.35861278055567e-51 | 4.57770990280428e-47 |
73 | 9 | NPCa | Nephron progenitor cells a | wk13 | CRABP2 | 1382 | 2339 | 1.71 | 0.81 | 0.08 | 1.19105484541056e-64 | 4.01314019612633e-60 |
73 | 9 | NPCa | Nephron progenitor cells a | wk13 | NNAT | 4826 | 7860 | 1.69 | 0.75 | 0.09 | 3.02988900768823e-51 | 1.02089080225047e-46 |
73 | 9 | NPCa | Nephron progenitor cells a | wk13 | IGF2 | 3481 | 5466 | 1.48 | 0.95 | 0.27 | 1.74814811182342e-32 | 5.89021024797783e-28 |
73 | 9 | NPCa | Nephron progenitor cells a | wk13 | RSPO3 | 84870 | 20866 | 1.43 | 0.5 | 0.02 | 7.51868842633892e-66 | 2.53334687837064e-61 |
73 | 9 | NPCa | Nephron progenitor cells a | wk13 | TUBA1A | 7846 | 20766 | 1.42 | 0.93 | 0.6 | 3.19185524988974e-19 | 1.07546370789785e-14 |
73 | 9 | NPCa | Nephron progenitor cells a | wk13 | EYA1 | 2138 | 3519 | 1.31 | 0.52 | 0.05 | 4.82704758423354e-43 | 1.62642541303165e-38 |
73 | 9 | NPCa | Nephron progenitor cells a | wk13 | CITED1 | 4435 | 1986 | 1.16 | 0.5 | 0.02 | 1.68235774656644e-66 | 5.66853619128097e-62 |
73 | 9 | NPCa | Nephron progenitor cells a | wk13 | MEIS2 | 4212 | 7001 | 1.13 | 0.63 | 0.13 | 9.24122652626624e-26 | 3.11373886576015e-21 |
73 | 9 | NPCa | Nephron progenitor cells a | wk13 | DAPL1 | 92196 | 21490 | 1.13 | 0.5 | 0.04 | 1.06502088440684e-47 | 3.5884813679204e-43 |
73 | 9 | NPCa | Nephron progenitor cells a | wk13 | NKAIN3 | 286183 | 26829 | 1.12 | 0.43 | 0.03 | 1.02005973282546e-37 | 3.43698926378211e-33 |
73 | 9 | NPCa | Nephron progenitor cells a | wk13 | PRXL2A | 84293 | 28651 | 1.11 | 0.77 | 0.4 | 1.23426676693855e-13 | 4.15873844452274e-09 |
73 | 9 | NPCa | Nephron progenitor cells a | wk13 | PHLDA1 | 22822 | 8933 | 1.09 | 0.59 | 0.13 | 8.50539936301486e-21 | 2.86580926137423e-16 |
73 | 9 | NPCa | Nephron progenitor cells a | wk13 | LYPD1 | 116372 | 28431 | 1.08 | 0.61 | 0.12 | 8.51311162104036e-24 | 2.86840782959334e-19 |
73 | 9 | NPCa | Nephron progenitor cells a | wk13 | BMPER | 168667 | 24154 | 1.07 | 0.43 | 0.02 | 7.73498259998539e-68 | 2.60622503723908e-63 |
73 | 9 | NPCa | Nephron progenitor cells a | wk13 | NTRK2 | 4915 | 8032 | 1.06 | 0.77 | 0.36 | 8.66235510116967e-13 | 2.91869392778811e-08 |
73 | 9 | NPCa | Nephron progenitor cells a | wk13 | MEOX1 | 4222 | 7013 | 1.04 | 0.4 | 0.02 | 9.74714490762616e-56 | 3.28420300517556e-51 |
73 | 9 | NPCa | Nephron progenitor cells a | wk13 | SLC15A1 | 6564 | 10920 | 1.03 | 0.36 | 0.03 | 2.19463664503909e-32 | 7.39460871179471e-28 |
73 | 9 | NPCa | Nephron progenitor cells a | wk13 | HOXC6 | 3223 | 5128 | 0.99 | 0.4 | 0.07 | 2.52323007424526e-18 | 8.50177141216198e-14 |
73 | 9 | NPCa | Nephron progenitor cells a | wk13 | SHISA3 | 152573 | 25159 | 0.97 | 0.54 | 0.17 | 2.70174822593749e-12 | 9.10327047247378e-08 |
73 | 9 | NPCa | Nephron progenitor cells a | wk13 | REC8 | 9985 | 16879 | 0.96 | 0.47 | 0.12 | 1.74316146813103e-15 | 5.87340825072068e-11 |
73 | 9 | NPCa | Nephron progenitor cells a | wk13 | SIX1 | 6495 | 10887 | 0.95 | 0.4 | 0.06 | 7.3261942174417e-20 | 2.46848787962481e-15 |
73 | 9 | NPCa | Nephron progenitor cells a | wk13 | NR2F2 | 7026 | 7976 | 0.94 | 0.81 | 0.45 | 3.46630282340678e-13 | 1.16793607331868e-08 |
73 | 9 | NPCa | Nephron progenitor cells a | wk13 | SOX11 | 6664 | 11191 | 0.93 | 0.65 | 0.34 | 7.43141777319924e-09 | 0.000250394190450175 |
73 | 9 | NPCa | Nephron progenitor cells a | wk13 | LAMA4 | 3910 | 6484 | 0.92 | 0.4 | 0.08 | 2.82169135725026e-15 | 9.50740685911903e-11 |
73 | 9 | NPCa | Nephron progenitor cells a | wk13 | OSR1 | 130497 | 8111 | 0.92 | 0.29 | 0.01 | 5.78373647979737e-53 | 1.94877216950292e-48 |
73 | 9 | NPCa | Nephron progenitor cells a | wk13 | SCG5 | 6447 | 10816 | 0.92 | 0.4 | 0.1 | 8.95760297198353e-13 | 3.01817474538013e-08 |
73 | 9 | NPCa | Nephron progenitor cells a | wk13 | ELAVL4 | 1996 | 3315 | 0.91 | 0.31 | 0.01 | 2.25843469458349e-65 | 7.60956985992961e-61 |
73 | 9 | NPCa | Nephron progenitor cells a | wk13 | HOXB9 | 3219 | 5120 | 0.91 | 0.38 | 0.08 | 2.06425213028053e-14 | 6.95529112776723e-10 |
73 | 9 | NPCa | Nephron progenitor cells a | wk13 | MAP1B | 4131 | 6836 | 0.89 | 0.45 | 0.14 | 3.39113494532755e-10 | 1.14260900847866e-05 |
73 | 9 | NPCa | Nephron progenitor cells a | wk13 | CHRNA1 | 1134 | 1955 | 0.88 | 0.29 | 0.008 | 2.64714834677804e-69 | 8.91930163963392e-65 |
73 | 9 | NPCa | Nephron progenitor cells a | wk13 | NCAM1 | 4684 | 7656 | 0.87 | 0.45 | 0.09 | 1.55200648273335e-18 | 5.22933064292176e-14 |
73 | 9 | NPCa | Nephron progenitor cells a | wk13 | ETV1 | 2115 | 3490 | 0.86 | 0.29 | 0.04 | 1.99459060851379e-15 | 6.72057359632638e-11 |
73 | 9 | NPCa | Nephron progenitor cells a | wk13 | MARCKSL1 | 65108 | 7142 | 0.86 | 0.97 | 0.79 | 3.95047034993103e-14 | 1.33107147970576e-09 |
73 | 9 | NPCa | Nephron progenitor cells a | wk13 | RBP1 | 5947 | 9919 | 0.86 | 0.63 | 0.28 | 3.88964903195948e-10 | 1.31057834482843e-05 |
73 | 9 | NPCa | Nephron progenitor cells a | wk13 | MEIS1 | 4211 | 7000 | 0.86 | 0.38 | 0.07 | 2.5942371829784e-15 | 8.74102276432743e-11 |
73 | 9 | NPCa | Nephron progenitor cells a | wk13 | HAS2 | 3037 | 4819 | 0.86 | 0.27 | 0.03 | 2.64196730815774e-18 | 8.90184464810668e-14 |
73 | 9 | NPCa | Nephron progenitor cells a | wk13 | SEPTIN6 | 23157 | 15848 | 0.85 | 0.5 | 0.21 | 1.37734729792042e-08 | 0.000464083398561306 |
73 | 9 | NPCa | Nephron progenitor cells a | wk13 | AP1S2 | 8905 | 560 | 0.85 | 0.52 | 0.13 | 7.47315783833188e-16 | 2.51800580204754e-11 |
73 | 9 | NPCa | Nephron progenitor cells a | wk13 | COL2A1 | 1280 | 2200 | 0.84 | 0.34 | 0.07 | 1.28035376608905e-12 | 4.31402397946045e-08 |
73 | 9 | NPCa | Nephron progenitor cells a | wk13 | ITGA8 | 8516 | 6144 | 0.83 | 0.31 | 0.03 | 2.07333916262405e-23 | 6.98590897454547e-19 |
73 | 9 | NPCa | Nephron progenitor cells a | wk13 | SINHCAF | 58516 | 30702 | 0.82 | 0.81 | 0.43 | 8.90578164738855e-13 | 3.0007140682711e-08 |
73 | 9 | NPCa | Nephron progenitor cells a | wk13 | ECEL1 | 9427 | 3147 | 0.79 | 0.29 | 0.01 | 8.01408961055357e-45 | 2.70026735337992e-40 |
73 | 9 | NPCa | Nephron progenitor cells a | wk13 | RBPJ | 3516 | 5724 | 0.78 | 0.61 | 0.33 | 5.66150065442741e-08 | 0.00190758603050277 |
73 | 9 | NPCa | Nephron progenitor cells a | wk13 | LRATD1 | 151354 | 20743 | 0.78 | 0.45 | 0.17 | 3.47611963474357e-08 | 0.0011712437497305 |
73 | 9 | NPCa | Nephron progenitor cells a | wk13 | PDGFC | 56034 | 8801 | 0.78 | 0.4 | 0.14 | 2.28444788969759e-08 | 0.000769721871954707 |
73 | 9 | NPCa | Nephron progenitor cells a | wk13 | PLEKHO1 | 51177 | 24310 | 0.77 | 0.38 | 0.12 | 4.99444792132123e-09 | 0.000168282928260998 |
73 | 9 | NPCa | Nephron progenitor cells a | wk13 | CDH7 | 1005 | 1766 | 0.75 | 0.25 | 0.02 | 1.74495411752088e-20 | 5.87944840357485e-16 |
73 | 9 | NPCa | Nephron progenitor cells a | wk13 | CCDC80 | 151887 | 30649 | 0.74 | 0.36 | 0.12 | 1.30355671937636e-07 | 0.00439220401026672 |
73 | 9 | NPCa | Nephron progenitor cells a | wk13 | NKAIN3-IT1 | 643763 | 48595 | 0.72 | 0.27 | 0.01 | 1.35169380702101e-44 | 4.5543971133766e-40 |
73 | 9 | NPCa | Nephron progenitor cells a | wk13 | NREP | 9315 | 16834 | 0.72 | 0.84 | 0.58 | 1.94028902828347e-09 | 6.53760985189834e-05 |
73 | 9 | NPCa | Nephron progenitor cells a | wk13 | RBM26 | 64062 | 20327 | 0.72 | 0.43 | 0.16 | 5.36254331380483e-08 | 0.0018068553441534 |
73 | 9 | NPCa | Nephron progenitor cells a | wk13 | C1QTNF4 | 114900 | 14346 | 0.72 | 0.47 | 0.17 | 4.70293242776855e-09 | 0.000158460605221233 |
73 | 9 | NPCa | Nephron progenitor cells a | wk13 | TNFRSF19 | 55504 | 11915 | 0.71 | 0.4 | 0.1 | 3.71720396752128e-12 | 1.25247470481662e-07 |
73 | 9 | NPCa | Nephron progenitor cells a | wk13 | KLF7 | 8609 | 6350 | 0.7 | 0.36 | 0.11 | 5.37637200837981e-08 | 0.00181151478450349 |
73 | 9 | NPCa | Nephron progenitor cells a | wk13 | SOX4 | 6659 | 11200 | 0.7 | 0.81 | 0.61 | 5.15066938707708e-07 | 0.01 |
73 | 9 | NPCa | Nephron progenitor cells a | wk13 | TTC28 | 23331 | 29179 | 0.69 | 0.31 | 0.09 | 2.3082838330005e-08 | 0.000777753154691187 |
73 | 9 | NPCa | Nephron progenitor cells a | wk13 | EFNA5 | 1946 | 3225 | 0.68 | 0.36 | 0.12 | 3.09372838347453e-07 | 0.01 |
73 | 9 | NPCa | Nephron progenitor cells a | wk13 | TPM1 | 7168 | 12010 | 0.68 | 0.81 | 0.45 | 1.21666003388987e-09 | 4.09941431818854e-05 |
73 | 9 | NPCa | Nephron progenitor cells a | wk13 | ENOX1 | 55068 | 25474 | 0.68 | 0.22 | 0.01 | 1.80549903285171e-27 | 6.08344844129056e-23 |
73 | 9 | NPCa | Nephron progenitor cells a | wk13 | ZNF703 | 80139 | 25883 | 0.68 | 0.38 | 0.14 | 3.55140997977357e-07 | 0.01 |
73 | 9 | NPCa | Nephron progenitor cells a | wk13 | HMCN1 | 83872 | 19194 | 0.66 | 0.2 | 0.007 | 1.75150568848492e-40 | 5.9015232667811e-36 |
73 | 9 | NPCa | Nephron progenitor cells a | wk13 | CADM1 | 23705 | 5951 | 0.66 | 0.63 | 0.32 | 1.75569986536199e-07 | 0.00591565512635069 |
73 | 9 | NPCa | Nephron progenitor cells a | wk13 | HOXA10 | 3206 | 5100 | 0.65 | 0.72 | 0.44 | 4.06066668557505e-08 | 0.00136820103303766 |
73 | 9 | NPCa | Nephron progenitor cells a | wk13 | IGF2-AS | 51214 | 14062 | 0.64 | 0.2 | 0.03 | 2.20924354159178e-11 | 7.44382518903936e-07 |
73 | 9 | NPCa | Nephron progenitor cells a | wk13 | MMP23B | 8510 | 7171 | 0.64 | 0.56 | 0.25 | 5.24096741941343e-07 | 0.01 |
73 | 9 | NPCa | Nephron progenitor cells a | wk13 | LY6H | 4062 | 6728 | 0.64 | 0.2 | 0.01 | 3.61045790323473e-26 | 1.21650768591591e-21 |
73 | 9 | NPCa | Nephron progenitor cells a | wk13 | MFAP2 | 4237 | 7033 | 0.63 | 0.47 | 0.22 | 6.32023117449551e-07 | 0.02 |
73 | 9 | NPCa | Nephron progenitor cells a | wk13 | MYO10 | 4651 | 7593 | 0.63 | 0.31 | 0.08 | 1.098540924596e-09 | 3.70142379133376e-05 |
73 | 9 | NPCa | Nephron progenitor cells a | wk13 | MEST | 4232 | 7028 | 0.63 | 0.93 | 0.74 | 6.7509893776475e-10 | 2.27467836090455e-05 |
73 | 9 | NPCa | Nephron progenitor cells a | wk13 | TCF7L2 | 6934 | 11641 | 0.62 | 0.5 | 0.21 | 1.4366509830758e-07 | 0.00484065182237561 |
73 | 9 | NPCa | Nephron progenitor cells a | wk13 | DDAH2 | 23564 | 2716 | 0.61 | 0.81 | 0.57 | 2.67931259000959e-07 | 0.00902767584077832 |
73 | 9 | NPCa | Nephron progenitor cells a | wk13 | PCDH15 | 65217 | 14674 | 0.6 | 0.2 | 0.006 | 1.01134151484745e-44 | 3.40761410012699e-40 |
73 | 9 | NPCa | Nephron progenitor cells a | wk13 | NR2F1-AS1 | 441094 | 48622 | 0.6 | 0.34 | 0.11 | 5.10985851990631e-07 | 0.01 |
73 | 9 | NPCa | Nephron progenitor cells a | wk13 | RGMA | 56963 | 30308 | 0.6 | 0.27 | 0.05 | 5.08107903519154e-10 | 1.71201877011744e-05 |
73 | 9 | NPCa | Nephron progenitor cells a | wk13 | NPTX2 | 4885 | 7953 | 0.59 | 0.18 | 0.01 | 5.6248648831471e-18 | 1.89524197372758e-13 |
73 | 9 | NPCa | Nephron progenitor cells a | wk13 | XIST | 7503 | 12810 | 0.59 | 0.88 | 0.67 | 4.75400513652088e-08 | 0.00160181449069935 |
73 | 9 | NPCa | Nephron progenitor cells a | wk13 | TESC | 54997 | 26065 | 0.58 | 0.25 | 0.05 | 3.28755705356245e-08 | 0.00110770947362733 |
73 | 9 | NPCa | Nephron progenitor cells a | wk13 | GDNF | 2668 | 4232 | 0.57 | 0.15 | 0.01 | 7.474940568759e-12 | 2.51860647523766e-07 |
73 | 9 | NPCa | Nephron progenitor cells a | wk13 | FAT3 | 120114 | 23112 | 0.57 | 0.2 | 0.01 | 6.53426703701741e-21 | 2.20165593545265e-16 |
73 | 9 | NPCa | Nephron progenitor cells a | wk13 | STOX1 | 219736 | 23508 | 0.57 | 0.18 | 0.02 | 5.72763565507657e-12 | 1.9298695576215e-07 |
73 | 9 | NPCa | Nephron progenitor cells a | wk13 | UNC5B | 219699 | 12568 | 0.56 | 0.2 | 0.04 | 1.17116614564982e-07 | 0.00394612721115251 |
73 | 9 | NPCa | Nephron progenitor cells a | wk13 | LINC02253 | 107984764 | 53151 | 0.56 | 0.18 | 0.007 | 5.54562769531621e-33 | 1.86854379565984e-28 |
73 | 9 | NPCa | Nephron progenitor cells a | wk13 | ZMAT4 | 79698 | 25844 | 0.55 | 0.18 | 0.005 | 7.08185114839097e-41 | 2.38615892593885e-36 |
73 | 9 | NPCa | Nephron progenitor cells a | wk13 | PCDH18 | 54510 | 14268 | 0.55 | 0.22 | 0.03 | 3.11700278871794e-11 | 1.05024291963062e-06 |
73 | 9 | NPCa | Nephron progenitor cells a | wk13 | CLK2 | 1196 | 2069 | 0.54 | 0.22 | 0.04 | 2.95794286624069e-09 | 9.96649269351139e-05 |
73 | 9 | NPCa | Nephron progenitor cells a | wk13 | KRBA2 | 124751 | 26989 | 0.54 | 0.15 | 0.01 | 6.39400481915624e-13 | 2.1543959837665e-08 |
73 | 9 | NPCa | Nephron progenitor cells a | wk13 | HNRNPR | 10236 | 5047 | 0.54 | 0.84 | 0.57 | 6.62078703621851e-08 | 0.00223080798398346 |
73 | 9 | NPCa | Nephron progenitor cells a | wk13 | EFNB3 | 1949 | 3228 | 0.54 | 0.22 | 0.04 | 1.51042948220606e-09 | 5.08924109734509e-05 |
73 | 9 | NPCa | Nephron progenitor cells a | wk13 | HTR1F | 3355 | 5292 | 0.54 | 0.18 | 0.009 | 2.97256551875355e-28 | 1.00157622588882e-23 |
73 | 9 | NPCa | Nephron progenitor cells a | wk13 | MDK | 4192 | 6972 | 0.53 | 0.95 | 0.68 | 8.16156799169161e-07 | 0.02 |
73 | 9 | NPCa | Nephron progenitor cells a | wk13 | LBX2 | 85474 | 15525 | 0.52 | 0.15 | 0.02 | 4.37947849093726e-10 | 1.4756214827364e-05 |
73 | 9 | NPCa | Nephron progenitor cells a | wk13 | COL6A2 | 1292 | 2212 | 0.52 | 0.2 | 0.03 | 5.85408674720312e-11 | 1.97247598860262e-06 |
73 | 9 | NPCa | Nephron progenitor cells a | wk13 | OSBPL6 | 114880 | 16388 | 0.52 | 0.15 | 0.01 | 2.88378697768697e-12 | 9.71663184261849e-08 |
73 | 9 | NPCa | Nephron progenitor cells a | wk13 | MFAP4 | 4239 | 7035 | 0.51 | 0.2 | 0.04 | 3.19664720001952e-07 | 0.01 |
73 | 9 | NPCa | Nephron progenitor cells a | wk13 | PTPRM | 5797 | 9675 | 0.5 | 0.18 | 0.02 | 4.34119791842272e-11 | 1.46272322663335e-06 |
73 | 9 | NPCa | Nephron progenitor cells a | wk13 | CLSTN3 | 9746 | 18371 | 0.5 | 0.22 | 0.05 | 1.7902376880457e-07 | 0.00603202686610117 |
73 | 9 | NPCa | Nephron progenitor cells a | wk13 | HOXC10 | 3226 | 5122 | 0.5 | 0.22 | 0.05 | 1.01983571714185e-07 | 0.00343623446533774 |
73 | 9 | NPCa | Nephron progenitor cells a | wk13 | ANKRD36B | 57730 | 29333 | 0.5 | 0.15 | 0.02 | 9.66916665190707e-10 | 3.25792901169357e-05 |
73 | 9 | NPCa | Nephron progenitor cells a | wk13 | ROR2 | 4920 | 10257 | 0.49 | 0.18 | 0.01 | 6.75814672087429e-15 | 2.27708995613138e-10 |