Marker Genes
Dataset: Single-cell transcriptomics reveals gene expression dynamics of human fetal kidney development
- tissue: Kidney
- ontology: Kidney
- genotype: -
- stage: Fetal
- treatment condition: WT
- cell/nucleus: Cells
- pmid: 30789893
- subset name: wk13
- total genes: Not reported
- clustering: scran
- pseudotime: Monocle 2
- link: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE114530
Rows:100
| dataset id | cluster id | cluster name | cell type name | sample id | gene symbol | entrez geneid | species specific geneid |
avg log fc (?)
|
pct 1 | pct 2 | p value | padj |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 73 | 8 | Mes | Mesangial cells | wk13 | MGP | 4256 | 7060 | 2.67 | 0.66 | 0.003 | 1.034459146262E-83 | 3.485506647415E-79 |
| 73 | 8 | Mes | Mesangial cells | wk13 | GATA3 | 2625 | 4172 | 2.51 | 0.66 | 0.02 | 5.9168361702026E-16 | 1.9936187791881E-11 |
| 73 | 8 | Mes | Mesangial cells | wk13 | ENG | 2022 | 3349 | 2.34 | 0.66 | 0.01 | 3.9826584114773E-18 | 1.3419169251632E-13 |
| 73 | 8 | Mes | Mesangial cells | wk13 | TPM2 | 7169 | 12011 | 2.11 | 1 | 0.13 | 9.2061866233933E-7 | 0.03 |
| 73 | 8 | Mes | Mesangial cells | wk13 | CHODL | 140578 | 17807 | 2.06 | 0.66 | 0.008 | 5.2617836983267E-37 | 1.7729053993142E-32 |
| 73 | 8 | Mes | Mesangial cells | wk13 | EMCN | 51705 | 16041 | 1.88 | 1 | 0.01 | 4.1430026907104E-37 | 1.395943326608E-32 |
| 73 | 8 | Mes | Mesangial cells | wk13 | TAGLN | 6876 | 11553 | 1.81 | 1 | 0.05 | 4.2407631907911E-13 | 1.4288827495052E-8 |
| 73 | 8 | Mes | Mesangial cells | wk13 | A2M | 2 | 7 | 1.8 | 0.66 | 0.009 | 2.9332810156607E-30 | 9.8833970541673E-26 |
| 73 | 8 | Mes | Mesangial cells | wk13 | ACTN1 | 87 | 163 | 1.74 | 1 | 0.08 | 7.0815317683444E-9 | 0.00023860513140259 |
| 73 | 8 | Mes | Mesangial cells | wk13 | FMOD | 2331 | 3774 | 1.58 | 0.66 | 0.005 | 7.6046960791859E-51 | 2.5623262969209E-46 |
| 73 | 8 | Mes | Mesangial cells | wk13 | GJA5 | 2702 | 4279 | 1.57 | 0.66 | 0.006 | 1.6500484902416E-48 | 5.5596733830199E-44 |
| 73 | 8 | Mes | Mesangial cells | wk13 | NPY1R | 4886 | 7956 | 1.56 | 0.66 | 0.01 | 3.8515672133047E-24 | 1.2977470568509E-19 |
| 73 | 8 | Mes | Mesangial cells | wk13 | SH3PXD2A | 9644 | 23664 | 1.48 | 0.66 | 0.03 | 5.7043980917308E-9 | 0.00019220398930278 |
| 73 | 8 | Mes | Mesangial cells | wk13 | COL1A2 | 1278 | 2198 | 1.45 | 1 | 0.08 | 9.4395774484224E-9 | 0.00031805712254714 |
| 73 | 8 | Mes | Mesangial cells | wk13 | TINAGL1 | 64129 | 19168 | 1.44 | 0.66 | 0.04 | 2.4500640619866E-8 | 0.00082552458504575 |
| 73 | 8 | Mes | Mesangial cells | wk13 | ACTA2 | 59 | 130 | 1.42 | 0.66 | 0.02 | 2.7261639650439E-12 | 9.1855368638189E-8 |
| 73 | 8 | Mes | Mesangial cells | wk13 | C1QL4 | 338761 | 31416 | 1.41 | 0.33 | 0.001 | 1.116847348444E-42 | 3.7631054558474E-38 |
| 73 | 8 | Mes | Mesangial cells | wk13 | KCNE4 | 23704 | 6244 | 1.41 | 0.66 | 0.003 | 6.6227946554891E-84 | 2.2314844312205E-79 |
| 73 | 8 | Mes | Mesangial cells | wk13 | FRZB | 2487 | 3959 | 1.4 | 0.66 | 0.007 | 7.0164896640982E-38 | 2.3641360274212E-33 |
| 73 | 8 | Mes | Mesangial cells | wk13 | SLFN5 | 162394 | 28286 | 1.39 | 0.66 | 0.01 | 7.6616036124101E-30 | 2.5815007211654E-25 |
| 73 | 8 | Mes | Mesangial cells | wk13 | SPRY4 | 81848 | 15533 | 1.38 | 0.66 | 0.01 | 4.8771265548414E-18 | 1.6432990213883E-13 |
| 73 | 8 | Mes | Mesangial cells | wk13 | POSTN | 10631 | 16953 | 1.38 | 0.33 | 0.008 | 1.6927314690881E-10 | 5.7034894119453E-6 |
| 73 | 8 | Mes | Mesangial cells | wk13 | AGTR1 | 185 | 336 | 1.37 | 0.66 | 0.009 | 2.0834569451531E-31 | 7.0199998309989E-27 |
| 73 | 8 | Mes | Mesangial cells | wk13 | CPED1 | 79974 | 26159 | 1.37 | 1 | 0.01 | 1.1005889180157E-57 | 3.7083243003621E-53 |
| 73 | 8 | Mes | Mesangial cells | wk13 | COL21A1 | 81578 | 17025 | 1.36 | 0.33 | 0.01 | 3.8254503784456E-8 | 0.0012889472505135 |
| 73 | 8 | Mes | Mesangial cells | wk13 | ZNF652 | 22834 | 29147 | 1.36 | 1 | 0.08 | 4.4747943270546E-9 | 0.00015077372005578 |
| 73 | 8 | Mes | Mesangial cells | wk13 | AGTR2 | 186 | 338 | 1.35 | 0.33 | 0.01 | 7.099723953066E-7 | 0.02 |
| 73 | 8 | Mes | Mesangial cells | wk13 | MEF2C | 4208 | 6996 | 1.34 | 0.66 | 0.02 | 7.0345505698033E-14 | 2.3702214689895E-9 |
| 73 | 8 | Mes | Mesangial cells | wk13 | NEIL2 | 252969 | 18956 | 1.28 | 0.66 | 0.04 | 1.7072078286532E-7 | 0.005752266057864 |
| 73 | 8 | Mes | Mesangial cells | wk13 | THBS3 | 7059 | 11787 | 1.28 | 0.66 | 0.04 | 1.783095888099E-7 | 0.0060079632853608 |
| 73 | 8 | Mes | Mesangial cells | wk13 | INO80E | 283899 | 26905 | 1.27 | 1 | 0.12 | 8.6927677284922E-7 | 0.02 |
| 73 | 8 | Mes | Mesangial cells | wk13 | LGALS1 | 3956 | 6561 | 1.27 | 1 | 0.06 | 2.7748422105761E-10 | 9.3495533443152E-6 |
| 73 | 8 | Mes | Mesangial cells | wk13 | CAMK1 | 8536 | 1459 | 1.27 | 1 | 0.05 | 2.2803856230941E-13 | 7.6835313184534E-9 |
| 73 | 8 | Mes | Mesangial cells | wk13 | C3orf14 | 57415 | 25024 | 1.24 | 1 | 0.06 | 3.899822295162E-11 | 1.3140061241319E-6 |
| 73 | 8 | Mes | Mesangial cells | wk13 | C19orf12 | 83636 | 25443 | 1.21 | 1 | 0.07 | 5.350717299129E-10 | 1.8028706867685E-5 |
| 73 | 8 | Mes | Mesangial cells | wk13 | DOCK10 | 55619 | 23479 | 1.2 | 0.66 | 0.001 | 9.9738885201016E-248 | 3.360601997963E-243 |
| 73 | 8 | Mes | Mesangial cells | wk13 | SRPX | 8406 | 11309 | 1.19 | 0.66 | 0.008 | 1.9969279601561E-35 | 6.7284490689499E-31 |
| 73 | 8 | Mes | Mesangial cells | wk13 | ENSG00000224934 | NULL | 1.19 | 0.66 | 0.004 | 5.380503249773E-63 | 1.8129067649785E-58 | |
| 73 | 8 | Mes | Mesangial cells | wk13 | RASGRP2 | 10235 | 9879 | 1.18 | 0.66 | 0.008 | 1.3731335243769E-36 | 4.6266360970355E-32 |
| 73 | 8 | Mes | Mesangial cells | wk13 | NGFR | 4804 | 7809 | 1.18 | 0.66 | 0.005 | 1.2986254657306E-50 | 4.3755886442327E-46 |
| 73 | 8 | Mes | Mesangial cells | wk13 | PDGFB | 5155 | 8800 | 1.18 | 0.66 | 0.01 | 2.80221148448E-27 | 9.4417713758067E-23 |
| 73 | 8 | Mes | Mesangial cells | wk13 | KCNJ2 | 3759 | 6263 | 1.17 | 0.66 | 0.01 | 8.8542730320874E-23 | 2.9833587554315E-18 |
| 73 | 8 | Mes | Mesangial cells | wk13 | DOLPP1 | 57171 | 29565 | 1.17 | 1 | 0.08 | 3.3680775375477E-8 | 0.0011348400455013 |
| 73 | 8 | Mes | Mesangial cells | wk13 | MARVELD1 | 83742 | 28674 | 1.16 | 0.66 | 0.01 | 1.1181423595131E-22 | 3.7674688661434E-18 |
| 73 | 8 | Mes | Mesangial cells | wk13 | EVI5L | 115704 | 30464 | 1.15 | 0.66 | 0.01 | 1.0032550745091E-15 | 3.3803676480508E-11 |
| 73 | 8 | Mes | Mesangial cells | wk13 | CAVIN1 | 284119 | 9688 | 1.15 | 0.66 | 0.01 | 2.9366806372797E-17 | 9.8948517392501E-13 |
| 73 | 8 | Mes | Mesangial cells | wk13 | DIMT1 | 27292 | 30217 | 1.13 | 1 | 0.1 | 8.1816359991459E-7 | 0.02 |
| 73 | 8 | Mes | Mesangial cells | wk13 | NBEA | 26960 | 7648 | 1.12 | 0.66 | 0.02 | 6.9758682152109E-12 | 2.3504490364332E-7 |
| 73 | 8 | Mes | Mesangial cells | wk13 | NRGN | 4900 | 8000 | 1.12 | 0.66 | 0.02 | 1.7943479823057E-11 | 6.045876091581E-7 |
| 73 | 8 | Mes | Mesangial cells | wk13 | RAB9A | 9367 | 9792 | 1.12 | 1 | 0.11 | 1.4466152140445E-6 | 0.04 |
| 73 | 8 | Mes | Mesangial cells | wk13 | MCAM | 4162 | 6934 | 1.11 | 0.66 | 0.02 | 9.4821054554434E-12 | 3.1949006121571E-7 |
| 73 | 8 | Mes | Mesangial cells | wk13 | ENSG00000245904 | NULL | 1.09 | 0.66 | 0.04 | 8.5933230998278E-8 | 0.002895434285256 | |
| 73 | 8 | Mes | Mesangial cells | wk13 | GUCY1A1 | 2982 | 4685 | 1.07 | 0.66 | 0.04 | 4.8191427221288E-8 | 0.0016237619487941 |
| 73 | 8 | Mes | Mesangial cells | wk13 | DIP2A | 23181 | 17217 | 1.07 | 0.66 | 0.04 | 5.7890670737773E-7 | 0.01 |
| 73 | 8 | Mes | Mesangial cells | wk13 | GLE1 | 2733 | 4315 | 1.06 | 0.66 | 0.05 | 1.3476009327721E-6 | 0.04 |
| 73 | 8 | Mes | Mesangial cells | wk13 | PMEPA1 | 56937 | 14107 | 1.06 | 0.66 | 0.04 | 9.0171666836607E-8 | 0.0030382441423926 |
| 73 | 8 | Mes | Mesangial cells | wk13 | UNC5B | 219699 | 12568 | 1.05 | 0.66 | 0.04 | 1.5948187926373E-7 | 0.0053735824399123 |
| 73 | 8 | Mes | Mesangial cells | wk13 | CYTOR | 112597 | 28717 | 0.94 | 0.33 | 0.004 | 6.9739659066854E-18 | 2.3498080725986E-13 |
| 73 | 8 | Mes | Mesangial cells | wk13 | HDAC9 | 9734 | 14065 | 0.94 | 0.33 | 0.005 | 3.7360048591512E-15 | 1.2588094772424E-10 |
| 73 | 8 | Mes | Mesangial cells | wk13 | BTN3A3 | 10384 | 1140 | 0.94 | 0.66 | 0.001 | 2.3011194764423E-165 | 7.7533919639246E-161 |
| 73 | 8 | Mes | Mesangial cells | wk13 | LINC01460 | 100129995 | 50858 | 0.94 | 0.33 | 0.001 | 3.1204551562374E-63 | 1.0514061603426E-58 |
| 73 | 8 | Mes | Mesangial cells | wk13 | KLHL30 | 377007 | 24770 | 0.93 | 0.66 | 0.001 | 1.0630955459532E-141 | 3.5819941325349E-137 |
| 73 | 8 | Mes | Mesangial cells | wk13 | ANO1 | 55107 | 21625 | 0.93 | 0.66 | 0.001 | 3.5888742083119E-165 | 1.2092352757486E-160 |
| 73 | 8 | Mes | Mesangial cells | wk13 | LOC105372876 | 105372876 | NULL | 0.93 | 0.33 | 0.002 | 9.3379571641271E-37 | 3.146331286881E-32 |
| 73 | 8 | Mes | Mesangial cells | wk13 | HLF | 3131 | 4977 | 0.93 | 0.66 | 0.002 | 6.7519367971251E-100 | 2.2749975844233E-95 |
| 73 | 8 | Mes | Mesangial cells | wk13 | ALDH1A3 | 220 | 409 | 0.93 | 0.33 | 0.002 | 6.0191207703278E-29 | 2.0280825523543E-24 |
| 73 | 8 | Mes | Mesangial cells | wk13 | ENSG00000271888 | NULL | 0.93 | 0.66 | 0.004 | 9.892608598574E-72 | 3.3332155412035E-67 | |
| 73 | 8 | Mes | Mesangial cells | wk13 | XKR5 | 389610 | 20782 | 0.93 | 0.33 | 0.004 | 4.1714099398105E-19 | 1.4055148651197E-14 |
| 73 | 8 | Mes | Mesangial cells | wk13 | LOC107985246 | 107985246 | NULL | 0.93 | 0.33 | 0.003 | 6.0842022964178E-24 | 2.050011121755E-19 |
| 73 | 8 | Mes | Mesangial cells | wk13 | ENSG00000276075 | NULL | 0.93 | 0.66 | 0.003 | 7.7384791954357E-77 | 2.6074031801101E-72 | |
| 73 | 8 | Mes | Mesangial cells | wk13 | ANKRD13B | 124930 | 26363 | 0.93 | 0.33 | 0.005 | 5.9536309869589E-16 | 2.0060164247459E-11 |
| 73 | 8 | Mes | Mesangial cells | wk13 | SLC16A7 | 9194 | 10928 | 0.93 | 0.66 | 0.004 | 1.7280774455734E-62 | 5.822584145115E-58 |
| 73 | 8 | Mes | Mesangial cells | wk13 | CHST15 | 51363 | 18137 | 0.92 | 0.66 | 0.005 | 1.6962108247737E-50 | 5.7152127529925E-46 |
| 73 | 8 | Mes | Mesangial cells | wk13 | GABBR2 | 9568 | 4507 | 0.92 | 0.33 | 0.005 | 6.1938892141771E-16 | 2.0869690318248E-11 |
| 73 | 8 | Mes | Mesangial cells | wk13 | SPHK1 | 8877 | 11240 | 0.92 | 0.66 | 0.006 | 6.4890617173737E-44 | 2.1864244550519E-39 |
| 73 | 8 | Mes | Mesangial cells | wk13 | CDH9 | 1007 | 1768 | 0.92 | 0.33 | 0.009 | 2.6840565805553E-9 | 9.0436602425231E-5 |
| 73 | 8 | Mes | Mesangial cells | wk13 | KANK4 | 163782 | 27263 | 0.92 | 0.33 | 0.006 | 1.3674782578235E-12 | 4.6075812419104E-8 |
| 73 | 8 | Mes | Mesangial cells | wk13 | ADAP2 | 55803 | 16487 | 0.92 | 0.33 | 0.004 | 4.1714099398105E-19 | 1.4055148651197E-14 |
| 73 | 8 | Mes | Mesangial cells | wk13 | DPP10-AS1 | 389023 | 40941 | 0.92 | 0.33 | 0.007 | 1.1402816280619E-11 | 3.8420649175916E-7 |
| 73 | 8 | Mes | Mesangial cells | wk13 | GASK1B | 51313 | 25312 | 0.91 | 0.66 | 0.006 | 7.5889533012162E-48 | 2.5570219253118E-43 |
| 73 | 8 | Mes | Mesangial cells | wk13 | SH2B3 | 10019 | 29605 | 0.91 | 0.66 | 0.008 | 4.1758148687025E-35 | 1.4069990618606E-30 |
| 73 | 8 | Mes | Mesangial cells | wk13 | FAS | 355 | 11920 | 0.91 | 0.33 | 0.01 | 8.1692107835457E-8 | 0.0027525338814079 |
| 73 | 8 | Mes | Mesangial cells | wk13 | EHD2 | 30846 | 3243 | 0.91 | 0.66 | 0.007 | 2.478181391123E-40 | 8.3499843792498E-36 |
| 73 | 8 | Mes | Mesangial cells | wk13 | ENSG00000248161 | NULL | 0.91 | 0.66 | 0.009 | 1.1381858680052E-32 | 3.8350034636569E-28 | |
| 73 | 8 | Mes | Mesangial cells | wk13 | APCDD1 | 147495 | 15718 | 0.91 | 0.33 | 0.006 | 4.4868234447191E-13 | 1.5117902914637E-8 |
| 73 | 8 | Mes | Mesangial cells | wk13 | MRVI1 | 10335 | 7237 | 0.91 | 0.66 | 0.009 | 5.4972873876367E-30 | 1.8522560123903E-25 |
| 73 | 8 | Mes | Mesangial cells | wk13 | RARG | 5916 | 9866 | 0.91 | 0.66 | 0.008 | 8.840673842242E-34 | 2.978776644405E-29 |
| 73 | 8 | Mes | Mesangial cells | wk13 | NEDD4 | 4734 | 7727 | 0.91 | 0.33 | 0.009 | 2.6260244641675E-9 | 8.8481268295659E-5 |
| 73 | 8 | Mes | Mesangial cells | wk13 | CA5B | 11238 | 1378 | 0.91 | 0.66 | 0.01 | 4.5874383105049E-27 | 1.5456914643415E-22 |
| 73 | 8 | Mes | Mesangial cells | wk13 | PLAC9 | 219348 | 19255 | 0.91 | 0.66 | 0.009 | 8.9622559286479E-32 | 3.0197425125986E-27 |
| 73 | 8 | Mes | Mesangial cells | wk13 | PTPN20 | 26095 | 23423 | 0.91 | 0.33 | 0.01 | 3.5475482760468E-8 | 0.0011953109161312 |
| 73 | 8 | Mes | Mesangial cells | wk13 | ENSG00000255389 | NULL | 0.91 | 0.66 | 0.01 | 1.0893917244505E-27 | 3.6705964763635E-23 | |
| 73 | 8 | Mes | Mesangial cells | wk13 | GLI1 | 2735 | 4317 | 0.91 | 0.33 | 0.01 | 1.426830535726E-8 | 0.00048075628070751 |
| 73 | 8 | Mes | Mesangial cells | wk13 | ZNF530 | 348327 | 29297 | 0.91 | 0.33 | 0.01 | 1.2767259724331E-7 | 0.004301800491516 |
| 73 | 8 | Mes | Mesangial cells | wk13 | ENSG00000273038 | NULL | 0.9 | 0.66 | 0.01 | 1.8679872277894E-27 | 6.2939961653136E-23 | |
| 73 | 8 | Mes | Mesangial cells | wk13 | GAS7 | 8522 | 4169 | 0.9 | 0.33 | 0.01 | 6.777276726994E-7 | 0.02 |
| 73 | 8 | Mes | Mesangial cells | wk13 | PDE1A | 5136 | 8774 | 0.9 | 0.66 | 0.01 | 7.7615864106652E-27 | 2.6151889252095E-22 |
| 73 | 8 | Mes | Mesangial cells | wk13 | L3MBTL4 | 91133 | 26677 | 0.9 | 0.66 | 0.01 | 2.7918194555699E-20 | 9.4067564735972E-16 |
| 73 | 8 | Mes | Mesangial cells | wk13 | ENSG00000267042 | NULL | 0.9 | 0.66 | 0.01 | 3.3485534204853E-23 | 1.1282615894983E-18 | |
| 73 | 8 | Mes | Mesangial cells | wk13 | DNAJC12 | 56521 | 28908 | 0.9 | 0.66 | 0.01 | 4.9473182922047E-21 | 1.6669494253755E-16 |