Marker Genes
Dataset: Single-cell transcriptomics reveals gene expression dynamics of human fetal kidney development
- tissue: Kidney
- ontology: Kidney
- genotype: -
- stage: Fetal
- treatment condition: WT
- cell/nucleus: Cells
- pmid: 30789893
- subset name: wk13
- total genes: Not reported
- clustering: scran
- pseudotime: Monocle 2
- link: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE114530
Rows:100
dataset id | cluster id | cluster name | cell type name | sample id | gene symbol | entrez geneid | species specific geneid |
avg log fc (?)
|
pct 1 | pct 2 | p value | padj |
---|---|---|---|---|---|---|---|---|---|---|---|---|
73 | 8 | Mes | Mesangial cells | wk13 | MGP | 4256 | 7060 | 2.67 | 0.66 | 0.003 | 1.03445914626196e-83 | 3.48550664741504e-79 |
73 | 8 | Mes | Mesangial cells | wk13 | GATA3 | 2625 | 4172 | 2.51 | 0.66 | 0.02 | 5.91683617020259e-16 | 1.99361877918806e-11 |
73 | 8 | Mes | Mesangial cells | wk13 | ENG | 2022 | 3349 | 2.34 | 0.66 | 0.01 | 3.98265841147729e-18 | 1.34191692516316e-13 |
73 | 8 | Mes | Mesangial cells | wk13 | TPM2 | 7169 | 12011 | 2.11 | 1 | 0.13 | 9.20618662339334e-07 | 0.03 |
73 | 8 | Mes | Mesangial cells | wk13 | CHODL | 140578 | 17807 | 2.06 | 0.66 | 0.008 | 5.26178369832671e-37 | 1.7729053993142e-32 |
73 | 8 | Mes | Mesangial cells | wk13 | EMCN | 51705 | 16041 | 1.88 | 1 | 0.01 | 4.14300269071038e-37 | 1.39594332660795e-32 |
73 | 8 | Mes | Mesangial cells | wk13 | TAGLN | 6876 | 11553 | 1.81 | 1 | 0.05 | 4.24076319079111e-13 | 1.42888274950516e-08 |
73 | 8 | Mes | Mesangial cells | wk13 | A2M | 2 | 7 | 1.8 | 0.66 | 0.009 | 2.93328101566074e-30 | 9.8833970541673e-26 |
73 | 8 | Mes | Mesangial cells | wk13 | ACTN1 | 87 | 163 | 1.74 | 1 | 0.08 | 7.08153176834437e-09 | 0.000238605131402595 |
73 | 8 | Mes | Mesangial cells | wk13 | FMOD | 2331 | 3774 | 1.58 | 0.66 | 0.005 | 7.60469607918586e-51 | 2.56232629692088e-46 |
73 | 8 | Mes | Mesangial cells | wk13 | GJA5 | 2702 | 4279 | 1.57 | 0.66 | 0.006 | 1.65004849024156e-48 | 5.55967338301992e-44 |
73 | 8 | Mes | Mesangial cells | wk13 | NPY1R | 4886 | 7956 | 1.56 | 0.66 | 0.01 | 3.8515672133047e-24 | 1.29774705685089e-19 |
73 | 8 | Mes | Mesangial cells | wk13 | SH3PXD2A | 9644 | 23664 | 1.48 | 0.66 | 0.03 | 5.70439809173085e-09 | 0.000192203989302779 |
73 | 8 | Mes | Mesangial cells | wk13 | COL1A2 | 1278 | 2198 | 1.45 | 1 | 0.08 | 9.43957744842239e-09 | 0.000318057122547144 |
73 | 8 | Mes | Mesangial cells | wk13 | TINAGL1 | 64129 | 19168 | 1.44 | 0.66 | 0.04 | 2.45006406198655e-08 | 0.000825524585045749 |
73 | 8 | Mes | Mesangial cells | wk13 | ACTA2 | 59 | 130 | 1.42 | 0.66 | 0.02 | 2.72616396504389e-12 | 9.18553686381887e-08 |
73 | 8 | Mes | Mesangial cells | wk13 | C1QL4 | 338761 | 31416 | 1.41 | 0.33 | 0.001 | 1.11684734844405e-42 | 3.76310545584739e-38 |
73 | 8 | Mes | Mesangial cells | wk13 | KCNE4 | 23704 | 6244 | 1.41 | 0.66 | 0.003 | 6.62279465548911e-84 | 2.2314844312205e-79 |
73 | 8 | Mes | Mesangial cells | wk13 | FRZB | 2487 | 3959 | 1.4 | 0.66 | 0.007 | 7.01648966409816e-38 | 2.36413602742123e-33 |
73 | 8 | Mes | Mesangial cells | wk13 | SLFN5 | 162394 | 28286 | 1.39 | 0.66 | 0.01 | 7.66160361241008e-30 | 2.58150072116545e-25 |
73 | 8 | Mes | Mesangial cells | wk13 | SPRY4 | 81848 | 15533 | 1.38 | 0.66 | 0.01 | 4.87712655484138e-18 | 1.64329902138826e-13 |
73 | 8 | Mes | Mesangial cells | wk13 | POSTN | 10631 | 16953 | 1.38 | 0.33 | 0.008 | 1.69273146908805e-10 | 5.70348941194528e-06 |
73 | 8 | Mes | Mesangial cells | wk13 | AGTR1 | 185 | 336 | 1.37 | 0.66 | 0.009 | 2.08345694515311e-31 | 7.01999983099888e-27 |
73 | 8 | Mes | Mesangial cells | wk13 | CPED1 | 79974 | 26159 | 1.37 | 1 | 0.01 | 1.1005889180157e-57 | 3.70832430036209e-53 |
73 | 8 | Mes | Mesangial cells | wk13 | COL21A1 | 81578 | 17025 | 1.36 | 0.33 | 0.01 | 3.82545037844563e-08 | 0.00128894725051347 |
73 | 8 | Mes | Mesangial cells | wk13 | ZNF652 | 22834 | 29147 | 1.36 | 1 | 0.08 | 4.47479432705457e-09 | 0.000150773720055777 |
73 | 8 | Mes | Mesangial cells | wk13 | AGTR2 | 186 | 338 | 1.35 | 0.33 | 0.01 | 7.09972395306597e-07 | 0.02 |
73 | 8 | Mes | Mesangial cells | wk13 | MEF2C | 4208 | 6996 | 1.34 | 0.66 | 0.02 | 7.03455056980326e-14 | 2.37022146898951e-09 |
73 | 8 | Mes | Mesangial cells | wk13 | NEIL2 | 252969 | 18956 | 1.28 | 0.66 | 0.04 | 1.70720782865318e-07 | 0.00575226605786402 |
73 | 8 | Mes | Mesangial cells | wk13 | THBS3 | 7059 | 11787 | 1.28 | 0.66 | 0.04 | 1.78309588809902e-07 | 0.00600796328536084 |
73 | 8 | Mes | Mesangial cells | wk13 | INO80E | 283899 | 26905 | 1.27 | 1 | 0.12 | 8.69276772849218e-07 | 0.02 |
73 | 8 | Mes | Mesangial cells | wk13 | LGALS1 | 3956 | 6561 | 1.27 | 1 | 0.06 | 2.77484221057614e-10 | 9.34955334431524e-06 |
73 | 8 | Mes | Mesangial cells | wk13 | CAMK1 | 8536 | 1459 | 1.27 | 1 | 0.05 | 2.28038562309415e-13 | 7.68353131845342e-09 |
73 | 8 | Mes | Mesangial cells | wk13 | C3orf14 | 57415 | 25024 | 1.24 | 1 | 0.06 | 3.89982229516196e-11 | 1.31400612413187e-06 |
73 | 8 | Mes | Mesangial cells | wk13 | C19orf12 | 83636 | 25443 | 1.21 | 1 | 0.07 | 5.35071729912903e-10 | 1.80287068676854e-05 |
73 | 8 | Mes | Mesangial cells | wk13 | DOCK10 | 55619 | 23479 | 1.2 | 0.66 | 0.001 | 9.97388852010156e-248 | 3.36060199796302e-243 |
73 | 8 | Mes | Mesangial cells | wk13 | SRPX | 8406 | 11309 | 1.19 | 0.66 | 0.008 | 1.99692796015608e-35 | 6.7284490689499e-31 |
73 | 8 | Mes | Mesangial cells | wk13 | ENSG00000224934 | NULL | 1.19 | 0.66 | 0.004 | 5.38050324977296e-63 | 1.8129067649785e-58 | |
73 | 8 | Mes | Mesangial cells | wk13 | RASGRP2 | 10235 | 9879 | 1.18 | 0.66 | 0.008 | 1.37313352437689e-36 | 4.62663609703548e-32 |
73 | 8 | Mes | Mesangial cells | wk13 | NGFR | 4804 | 7809 | 1.18 | 0.66 | 0.005 | 1.2986254657306e-50 | 4.37558864423269e-46 |
73 | 8 | Mes | Mesangial cells | wk13 | PDGFB | 5155 | 8800 | 1.18 | 0.66 | 0.01 | 2.80221148447995e-27 | 9.44177137580673e-23 |
73 | 8 | Mes | Mesangial cells | wk13 | KCNJ2 | 3759 | 6263 | 1.17 | 0.66 | 0.01 | 8.85427303208742e-23 | 2.98335875543153e-18 |
73 | 8 | Mes | Mesangial cells | wk13 | DOLPP1 | 57171 | 29565 | 1.17 | 1 | 0.08 | 3.3680775375477e-08 | 0.00113484004550132 |
73 | 8 | Mes | Mesangial cells | wk13 | MARVELD1 | 83742 | 28674 | 1.16 | 0.66 | 0.01 | 1.11814235951308e-22 | 3.76746886614336e-18 |
73 | 8 | Mes | Mesangial cells | wk13 | EVI5L | 115704 | 30464 | 1.15 | 0.66 | 0.01 | 1.00325507450906e-15 | 3.38036764805084e-11 |
73 | 8 | Mes | Mesangial cells | wk13 | CAVIN1 | 284119 | 9688 | 1.15 | 0.66 | 0.01 | 2.93668063727967e-17 | 9.89485173925011e-13 |
73 | 8 | Mes | Mesangial cells | wk13 | DIMT1 | 27292 | 30217 | 1.13 | 1 | 0.1 | 8.18163599914585e-07 | 0.02 |
73 | 8 | Mes | Mesangial cells | wk13 | NBEA | 26960 | 7648 | 1.12 | 0.66 | 0.02 | 6.97586821521092e-12 | 2.35044903643317e-07 |
73 | 8 | Mes | Mesangial cells | wk13 | NRGN | 4900 | 8000 | 1.12 | 0.66 | 0.02 | 1.79434798230574e-11 | 6.04587609158097e-07 |
73 | 8 | Mes | Mesangial cells | wk13 | RAB9A | 9367 | 9792 | 1.12 | 1 | 0.11 | 1.44661521404452e-06 | 0.04 |
73 | 8 | Mes | Mesangial cells | wk13 | MCAM | 4162 | 6934 | 1.11 | 0.66 | 0.02 | 9.48210545544343e-12 | 3.19490061215711e-07 |
73 | 8 | Mes | Mesangial cells | wk13 | ENSG00000245904 | NULL | 1.09 | 0.66 | 0.04 | 8.59332309982778e-08 | 0.00289543428525597 | |
73 | 8 | Mes | Mesangial cells | wk13 | GUCY1A1 | 2982 | 4685 | 1.07 | 0.66 | 0.04 | 4.81914272212877e-08 | 0.00162376194879407 |
73 | 8 | Mes | Mesangial cells | wk13 | DIP2A | 23181 | 17217 | 1.07 | 0.66 | 0.04 | 5.7890670737773e-07 | 0.01 |
73 | 8 | Mes | Mesangial cells | wk13 | GLE1 | 2733 | 4315 | 1.06 | 0.66 | 0.05 | 1.34760093277206e-06 | 0.04 |
73 | 8 | Mes | Mesangial cells | wk13 | PMEPA1 | 56937 | 14107 | 1.06 | 0.66 | 0.04 | 9.01716668366072e-08 | 0.00303824414239264 |
73 | 8 | Mes | Mesangial cells | wk13 | UNC5B | 219699 | 12568 | 1.05 | 0.66 | 0.04 | 1.59481879263734e-07 | 0.00537358243991226 |
73 | 8 | Mes | Mesangial cells | wk13 | CYTOR | 112597 | 28717 | 0.94 | 0.33 | 0.004 | 6.97396590668535e-18 | 2.34980807259856e-13 |
73 | 8 | Mes | Mesangial cells | wk13 | HDAC9 | 9734 | 14065 | 0.94 | 0.33 | 0.005 | 3.73600485915123e-15 | 1.25880947724242e-10 |
73 | 8 | Mes | Mesangial cells | wk13 | BTN3A3 | 10384 | 1140 | 0.94 | 0.66 | 0.001 | 2.30111947644227e-165 | 7.75339196392459e-161 |
73 | 8 | Mes | Mesangial cells | wk13 | LINC01460 | 100129995 | 50858 | 0.94 | 0.33 | 0.001 | 3.12045515623741e-63 | 1.05140616034263e-58 |
73 | 8 | Mes | Mesangial cells | wk13 | KLHL30 | 377007 | 24770 | 0.93 | 0.66 | 0.001 | 1.06309554595324e-141 | 3.58199413253486e-137 |
73 | 8 | Mes | Mesangial cells | wk13 | ANO1 | 55107 | 21625 | 0.93 | 0.66 | 0.001 | 3.5888742083119e-165 | 1.20923527574861e-160 |
73 | 8 | Mes | Mesangial cells | wk13 | LOC105372876 | 105372876 | NULL | 0.93 | 0.33 | 0.002 | 9.33795716412711e-37 | 3.14633128688099e-32 |
73 | 8 | Mes | Mesangial cells | wk13 | HLF | 3131 | 4977 | 0.93 | 0.66 | 0.002 | 6.75193679712508e-100 | 2.27499758442332e-95 |
73 | 8 | Mes | Mesangial cells | wk13 | ALDH1A3 | 220 | 409 | 0.93 | 0.33 | 0.002 | 6.01912077032784e-29 | 2.02808255235426e-24 |
73 | 8 | Mes | Mesangial cells | wk13 | ENSG00000271888 | NULL | 0.93 | 0.66 | 0.004 | 9.89260859857396e-72 | 3.33321554120351e-67 | |
73 | 8 | Mes | Mesangial cells | wk13 | XKR5 | 389610 | 20782 | 0.93 | 0.33 | 0.004 | 4.17140993981047e-19 | 1.40551486511974e-14 |
73 | 8 | Mes | Mesangial cells | wk13 | LOC107985246 | 107985246 | NULL | 0.93 | 0.33 | 0.003 | 6.08420229641776e-24 | 2.050011121755e-19 |
73 | 8 | Mes | Mesangial cells | wk13 | ENSG00000276075 | NULL | 0.93 | 0.66 | 0.003 | 7.73847919543566e-77 | 2.60740318011009e-72 | |
73 | 8 | Mes | Mesangial cells | wk13 | ANKRD13B | 124930 | 26363 | 0.93 | 0.33 | 0.005 | 5.95363098695886e-16 | 2.00601642474592e-11 |
73 | 8 | Mes | Mesangial cells | wk13 | SLC16A7 | 9194 | 10928 | 0.93 | 0.66 | 0.004 | 1.72807744557341e-62 | 5.82258414511503e-58 |
73 | 8 | Mes | Mesangial cells | wk13 | CHST15 | 51363 | 18137 | 0.92 | 0.66 | 0.005 | 1.69621082477368e-50 | 5.71521275299245e-46 |
73 | 8 | Mes | Mesangial cells | wk13 | GABBR2 | 9568 | 4507 | 0.92 | 0.33 | 0.005 | 6.19388921417715e-16 | 2.08696903182485e-11 |
73 | 8 | Mes | Mesangial cells | wk13 | SPHK1 | 8877 | 11240 | 0.92 | 0.66 | 0.006 | 6.48906171737367e-44 | 2.18642445505188e-39 |
73 | 8 | Mes | Mesangial cells | wk13 | CDH9 | 1007 | 1768 | 0.92 | 0.33 | 0.009 | 2.68405658055531e-09 | 9.04366024252307e-05 |
73 | 8 | Mes | Mesangial cells | wk13 | KANK4 | 163782 | 27263 | 0.92 | 0.33 | 0.006 | 1.36747825782346e-12 | 4.60758124191037e-08 |
73 | 8 | Mes | Mesangial cells | wk13 | ADAP2 | 55803 | 16487 | 0.92 | 0.33 | 0.004 | 4.17140993981047e-19 | 1.40551486511974e-14 |
73 | 8 | Mes | Mesangial cells | wk13 | DPP10-AS1 | 389023 | 40941 | 0.92 | 0.33 | 0.007 | 1.14028162806187e-11 | 3.84206491759165e-07 |
73 | 8 | Mes | Mesangial cells | wk13 | GASK1B | 51313 | 25312 | 0.91 | 0.66 | 0.006 | 7.58895330121624e-48 | 2.5570219253118e-43 |
73 | 8 | Mes | Mesangial cells | wk13 | SH2B3 | 10019 | 29605 | 0.91 | 0.66 | 0.008 | 4.1758148687025e-35 | 1.40699906186062e-30 |
73 | 8 | Mes | Mesangial cells | wk13 | FAS | 355 | 11920 | 0.91 | 0.33 | 0.01 | 8.16921078354569e-08 | 0.00275253388140788 |
73 | 8 | Mes | Mesangial cells | wk13 | EHD2 | 30846 | 3243 | 0.91 | 0.66 | 0.007 | 2.47818139112298e-40 | 8.34998437924976e-36 |
73 | 8 | Mes | Mesangial cells | wk13 | ENSG00000248161 | NULL | 0.91 | 0.66 | 0.009 | 1.13818586800524e-32 | 3.83500346365685e-28 | |
73 | 8 | Mes | Mesangial cells | wk13 | APCDD1 | 147495 | 15718 | 0.91 | 0.33 | 0.006 | 4.4868234447191e-13 | 1.51179029146365e-08 |
73 | 8 | Mes | Mesangial cells | wk13 | MRVI1 | 10335 | 7237 | 0.91 | 0.66 | 0.009 | 5.49728738763669e-30 | 1.85225601239031e-25 |
73 | 8 | Mes | Mesangial cells | wk13 | RARG | 5916 | 9866 | 0.91 | 0.66 | 0.008 | 8.84067384224199e-34 | 2.97877664440502e-29 |
73 | 8 | Mes | Mesangial cells | wk13 | NEDD4 | 4734 | 7727 | 0.91 | 0.33 | 0.009 | 2.62602446416748e-09 | 8.84812682956592e-05 |
73 | 8 | Mes | Mesangial cells | wk13 | CA5B | 11238 | 1378 | 0.91 | 0.66 | 0.01 | 4.58743831050488e-27 | 1.54569146434152e-22 |
73 | 8 | Mes | Mesangial cells | wk13 | PLAC9 | 219348 | 19255 | 0.91 | 0.66 | 0.009 | 8.96225592864788e-32 | 3.01974251259862e-27 |
73 | 8 | Mes | Mesangial cells | wk13 | PTPN20 | 26095 | 23423 | 0.91 | 0.33 | 0.01 | 3.54754827604677e-08 | 0.0011953109161312 |
73 | 8 | Mes | Mesangial cells | wk13 | ENSG00000255389 | NULL | 0.91 | 0.66 | 0.01 | 1.0893917244505e-27 | 3.67059647636352e-23 | |
73 | 8 | Mes | Mesangial cells | wk13 | GLI1 | 2735 | 4317 | 0.91 | 0.33 | 0.01 | 1.42683053572598e-08 | 0.000480756280707513 |
73 | 8 | Mes | Mesangial cells | wk13 | ZNF530 | 348327 | 29297 | 0.91 | 0.33 | 0.01 | 1.27672597243307e-07 | 0.00430180049151599 |
73 | 8 | Mes | Mesangial cells | wk13 | ENSG00000273038 | NULL | 0.9 | 0.66 | 0.01 | 1.86798722778939e-27 | 6.29399616531356e-23 | |
73 | 8 | Mes | Mesangial cells | wk13 | GAS7 | 8522 | 4169 | 0.9 | 0.33 | 0.01 | 6.77727672699401e-07 | 0.02 |
73 | 8 | Mes | Mesangial cells | wk13 | PDE1A | 5136 | 8774 | 0.9 | 0.66 | 0.01 | 7.76158641066519e-27 | 2.61518892520953e-22 |
73 | 8 | Mes | Mesangial cells | wk13 | L3MBTL4 | 91133 | 26677 | 0.9 | 0.66 | 0.01 | 2.7918194555699e-20 | 9.40675647359724e-16 |
73 | 8 | Mes | Mesangial cells | wk13 | ENSG00000267042 | NULL | 0.9 | 0.66 | 0.01 | 3.34855342048531e-23 | 1.12826158949832e-18 | |
73 | 8 | Mes | Mesangial cells | wk13 | DNAJC12 | 56521 | 28908 | 0.9 | 0.66 | 0.01 | 4.94731829220472e-21 | 1.66694942537546e-16 |