Marker Genes
Dataset: Single-cell transcriptomics reveals gene expression dynamics of human fetal kidney development
- tissue: Kidney
- ontology: Kidney
- genotype: -
- stage: Fetal
- treatment condition: WT
- cell/nucleus: Cells
- pmid: 30789893
- subset name: wk13
- total genes: Not reported
- clustering: scran
- pseudotime: Monocle 2
- link: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE114530
Rows:100
dataset id | cluster id | cluster name | cell type name | sample id | gene symbol | entrez geneid | species specific geneid |
avg log fc (?)
|
pct 1 | pct 2 | p value | padj |
---|---|---|---|---|---|---|---|---|---|---|---|---|
73 | 7 | Leu | Leukocyte | wk13 | CD74 | 972 | 1697 | 4.25 | 0.91 | 0.12 | 3.21001201681782e-20 | 1.0815814489466e-15 |
73 | 7 | Leu | Leukocyte | wk13 | HLA-DRA | 3122 | 4947 | 4.08 | 0.83 | 0.004 | 1.8628468051026e-258 | 6.27667602511271e-254 |
73 | 7 | Leu | Leukocyte | wk13 | HLA-DPA1 | 3113 | 4938 | 3.55 | 0.75 | 0.002 | 0 | 0 |
73 | 7 | Leu | Leukocyte | wk13 | HLA-DPB1 | 3115 | 4940 | 3.54 | 0.83 | 0.01 | 2.28852121579937e-100 | 7.71094338451441e-96 |
73 | 7 | Leu | Leukocyte | wk13 | LYZ | 4069 | 6740 | 2.76 | 0.58 | 0.002 | 1.31610924450047e-216 | 4.43449848841988e-212 |
73 | 7 | Leu | Leukocyte | wk13 | SRGN | 5552 | 9361 | 2.75 | 0.83 | 0.002 | 0 | 0 |
73 | 7 | Leu | Leukocyte | wk13 | HLA-DRB1 | 3123 | 4948 | 2.74 | 0.83 | 0.008 | 3.39230524558918e-164 | 1.14300332944882e-159 |
73 | 7 | Leu | Leukocyte | wk13 | LTB | 4050 | 6711 | 2.59 | 0.33 | 0.004 | 1.49882953596872e-62 | 5.05015623849301e-58 |
73 | 7 | Leu | Leukocyte | wk13 | ARHGDIB | 397 | 679 | 2.49 | 0.91 | 0.02 | 1.0453407744541e-88 | 3.52217120544564e-84 |
73 | 7 | Leu | Leukocyte | wk13 | LST1 | 7940 | 14189 | 2.26 | 0.66 | 0.001 | 0 | 0 |
73 | 7 | Leu | Leukocyte | wk13 | HLA-DQA1 | 3117 | 4942 | 2.22 | 0.5 | 0.001 | 5.13326164493579e-278 | 1.72960117864466e-273 |
73 | 7 | Leu | Leukocyte | wk13 | B2M | 567 | 914 | 2.22 | 1 | 0.56 | 7.20958870304316e-10 | 2.42919881760336e-05 |
73 | 7 | Leu | Leukocyte | wk13 | HLA-B | 3106 | 4932 | 2.2 | 0.91 | 0.07 | 1.30407206130994e-31 | 4.3939404033777e-27 |
73 | 7 | Leu | Leukocyte | wk13 | CORO1A | 11151 | 2252 | 2.19 | 0.75 | 0.009 | 4.76899115855503e-133 | 1.60686388096353e-128 |
73 | 7 | Leu | Leukocyte | wk13 | IL1B | 3553 | 5992 | 2.14 | 0.58 | 0.001 | 1.06218206248652e-302 | 3.57891624134208e-298 |
73 | 7 | Leu | Leukocyte | wk13 | CCL3 | 6348 | 10627 | 2.14 | 0.58 | 0.001 | 0 | 0 |
73 | 7 | Leu | Leukocyte | wk13 | RGS2 | 5997 | 9998 | 2.02 | 0.66 | 0.19 | 7.01577656177686e-07 | 0.02 |
73 | 7 | Leu | Leukocyte | wk13 | NR4A2 | 4929 | 7981 | 1.99 | 0.83 | 0.01 | 4.89467645145283e-125 | 1.64921228355252e-120 |
73 | 7 | Leu | Leukocyte | wk13 | HLA-DQB1 | 3119 | 4944 | 1.92 | 0.58 | 0.02 | 7.11633232662858e-35 | 2.39777701413423e-30 |
73 | 7 | Leu | Leukocyte | wk13 | S100A9 | 6280 | 10499 | 1.85 | 0.16 | 0.003 | 1.12513579359527e-21 | 3.79103254293989e-17 |
73 | 7 | Leu | Leukocyte | wk13 | FCER1G | 2207 | 3611 | 1.83 | 0.75 | 0.004 | 3.3679692102764e-217 | 1.13480354571053e-212 |
73 | 7 | Leu | Leukocyte | wk13 | S100A4 | 6275 | 10494 | 1.82 | 0.66 | 0.12 | 1.0422728263594e-09 | 3.51183406113535e-05 |
73 | 7 | Leu | Leukocyte | wk13 | CD52 | 1043 | 1804 | 1.81 | 0.5 | 0.001 | 1.2387713639424e-202 | 4.17391623366754e-198 |
73 | 7 | Leu | Leukocyte | wk13 | NFKBID | 84807 | 15671 | 1.8 | 0.83 | 0.01 | 7.38801323423735e-88 | 2.48931717914393e-83 |
73 | 7 | Leu | Leukocyte | wk13 | SH3BGRL3 | 83442 | 15568 | 1.78 | 0.91 | 0.46 | 1.46633054223803e-07 | 0.00494065412901682 |
73 | 7 | Leu | Leukocyte | wk13 | COTL1 | 23406 | 18304 | 1.78 | 0.91 | 0.32 | 3.12424020014178e-09 | 0.000105268149303577 |
73 | 7 | Leu | Leukocyte | wk13 | TYROBP | 7305 | 12449 | 1.78 | 0.58 | 0.001 | 0 | 0 |
73 | 7 | Leu | Leukocyte | wk13 | ZFP36 | 7538 | 12862 | 1.75 | 0.91 | 0.16 | 6.67719136462746e-15 | 2.24981285839758e-10 |
73 | 7 | Leu | Leukocyte | wk13 | DUSP2 | 1844 | 3068 | 1.74 | 0.66 | 0.01 | 8.82558377311579e-82 | 2.97369219651364e-77 |
73 | 7 | Leu | Leukocyte | wk13 | C15orf48 | 84419 | 29898 | 1.72 | 0.5 | 0.005 | 4.6981383582099e-93 | 1.58299073841524e-88 |
73 | 7 | Leu | Leukocyte | wk13 | TYMP | 1890 | 3148 | 1.72 | 0.58 | 0.01 | 8.75445729531947e-53 | 2.94972684108494e-48 |
73 | 7 | Leu | Leukocyte | wk13 | LSP1 | 4046 | 6707 | 1.68 | 0.58 | 0.003 | 2.52943721558456e-178 | 8.52268575419061e-174 |
73 | 7 | Leu | Leukocyte | wk13 | CREM | 1390 | 2352 | 1.65 | 0.75 | 0.19 | 1.39965697845832e-08 | 0.000471600422321746 |
73 | 7 | Leu | Leukocyte | wk13 | SOD2 | 6648 | 11180 | 1.65 | 1 | 0.16 | 5.45639605184371e-18 | 1.83847808570822e-13 |
73 | 7 | Leu | Leukocyte | wk13 | REL | 5966 | 9954 | 1.63 | 0.75 | 0.1 | 9.67749828753564e-15 | 3.26073627300226e-10 |
73 | 7 | Leu | Leukocyte | wk13 | CLEC9A | 283420 | 26705 | 1.58 | 0.25 | 0 | 5.16905129277698e-186 | 1.74166014258828e-181 |
73 | 7 | Leu | Leukocyte | wk13 | LIMD2 | 80774 | 28142 | 1.54 | 0.75 | 0.12 | 3.5570370215856e-13 | 1.19850805405305e-08 |
73 | 7 | Leu | Leukocyte | wk13 | ARPC1B | 10095 | 704 | 1.53 | 0.66 | 0.13 | 1.07352224833209e-09 | 3.61712586353013e-05 |
73 | 7 | Leu | Leukocyte | wk13 | MNDA | 4332 | 7183 | 1.52 | 0.5 | 0 | 0 | 0 |
73 | 7 | Leu | Leukocyte | wk13 | NEAT1 | 283131 | 30815 | 1.5 | 1 | 0.46 | 1.32156635607777e-08 | 0.000445288568016843 |
73 | 7 | Leu | Leukocyte | wk13 | GPR65 | 8477 | 4517 | 1.49 | 0.83 | 0 | 0 | 0 |
73 | 7 | Leu | Leukocyte | wk13 | RGCC | 28984 | 20369 | 1.49 | 0.5 | 0.02 | 5.23174686693289e-31 | 1.76278478934437e-26 |
73 | 7 | Leu | Leukocyte | wk13 | CXCL8 | 3576 | 6025 | 1.48 | 0.33 | 0 | 2.11491952039957e-247 | 7.1260098320343e-243 |
73 | 7 | Leu | Leukocyte | wk13 | PLAUR | 5329 | 9053 | 1.48 | 0.66 | 0.01 | 1.00565475667936e-92 | 3.38845313715545e-88 |
73 | 7 | Leu | Leukocyte | wk13 | LAPTM5 | 7805 | 29612 | 1.47 | 0.66 | 0.003 | 4.5956040312273e-219 | 1.54844282228173e-214 |
73 | 7 | Leu | Leukocyte | wk13 | LGALS1 | 3956 | 6561 | 1.47 | 0.58 | 0.06 | 6.74952504656512e-13 | 2.27418496918965e-08 |
73 | 7 | Leu | Leukocyte | wk13 | MPEG1 | 219972 | 29619 | 1.47 | 0.41 | 0 | 0 | 0 |
73 | 7 | Leu | Leukocyte | wk13 | SLC16A3 | 9123 | 10924 | 1.46 | 0.33 | 0.03 | 9.87089860519598e-10 | 3.32590057603473e-05 |
73 | 7 | Leu | Leukocyte | wk13 | FCN1 | 2219 | 3623 | 1.45 | 0.25 | 0 | 5.16905129277698e-186 | 1.74166014258828e-181 |
73 | 7 | Leu | Leukocyte | wk13 | CD48 | 962 | 1683 | 1.43 | 0.75 | 0 | 0 | 0 |
73 | 7 | Leu | Leukocyte | wk13 | LCP1 | 3936 | 6528 | 1.43 | 0.75 | 0.004 | 1.53686281783478e-238 | 5.17830557841251e-234 |
73 | 7 | Leu | Leukocyte | wk13 | GMFG | 9535 | 4374 | 1.42 | 0.75 | 0.009 | 4.56099344088951e-131 | 1.53678112997331e-126 |
73 | 7 | Leu | Leukocyte | wk13 | CD83 | 9308 | 1703 | 1.42 | 0.66 | 0.04 | 8.52638531209231e-25 | 2.87288026705638e-20 |
73 | 7 | Leu | Leukocyte | wk13 | IL7R | 3575 | 6024 | 1.41 | 0.16 | 0 | 1.61375570556319e-83 | 5.43738847432462e-79 |
73 | 7 | Leu | Leukocyte | wk13 | ALOX5AP | 241 | 436 | 1.41 | 0.5 | 0.001 | 1.15144562259303e-222 | 3.87968088076497e-218 |
73 | 7 | Leu | Leukocyte | wk13 | HLA-C | 3107 | 4933 | 1.4 | 0.83 | 0.06 | 1.12768207580123e-28 | 3.79961198620466e-24 |
73 | 7 | Leu | Leukocyte | wk13 | S100A8 | 6279 | 10498 | 1.39 | 0.16 | 0 | 1.23273758090129e-124 | 4.15358600508882e-120 |
73 | 7 | Leu | Leukocyte | wk13 | GPR183 | 1880 | 3128 | 1.38 | 0.66 | 0.006 | 1.27505161133902e-141 | 4.29615889924571e-137 |
73 | 7 | Leu | Leukocyte | wk13 | VASP | 7408 | 12652 | 1.38 | 0.66 | 0.09 | 7.62742369649516e-12 | 2.56998414029708e-07 |
73 | 7 | Leu | Leukocyte | wk13 | S100B | 6285 | 10500 | 1.37 | 0.25 | 0.002 | 1.91854182665598e-56 | 6.46433483073467e-52 |
73 | 7 | Leu | Leukocyte | wk13 | RNASE6 | 6039 | 10048 | 1.35 | 0.58 | 0 | 0 | 0 |
73 | 7 | Leu | Leukocyte | wk13 | SAMHD1 | 25939 | 15925 | 1.34 | 0.58 | 0.01 | 3.23993960418828e-65 | 1.0916652502352e-60 |
73 | 7 | Leu | Leukocyte | wk13 | PTPRE | 5791 | 9669 | 1.33 | 0.5 | 0.007 | 1.29110827653006e-72 | 4.35026022694039e-68 |
73 | 7 | Leu | Leukocyte | wk13 | RNASET2 | 8635 | 21686 | 1.32 | 0.66 | 0.13 | 9.22315338623174e-10 | 3.10764930195692e-05 |
73 | 7 | Leu | Leukocyte | wk13 | HLA-DMA | 3108 | 4934 | 1.32 | 0.5 | 0.01 | 1.5415032033328e-45 | 5.19394089330955e-41 |
73 | 7 | Leu | Leukocyte | wk13 | NR4A1 | 3164 | 7980 | 1.3 | 0.66 | 0.07 | 6.86619278481912e-15 | 2.31349499691695e-10 |
73 | 7 | Leu | Leukocyte | wk13 | CTSS | 1520 | 2545 | 1.3 | 0.5 | 0 | 0 | 0 |
73 | 7 | Leu | Leukocyte | wk13 | ITGB2 | 3689 | 6155 | 1.29 | 0.75 | 0.008 | 1.61615863490435e-139 | 5.44548490444671e-135 |
73 | 7 | Leu | Leukocyte | wk13 | ANXA1 | 301 | 533 | 1.28 | 0.58 | 0.09 | 3.36236470194179e-09 | 0.000113291516267227 |
73 | 7 | Leu | Leukocyte | wk13 | ZNF331 | 55422 | 15489 | 1.26 | 0.75 | 0.07 | 6.37780684028829e-20 | 2.14893823676673e-15 |
73 | 7 | Leu | Leukocyte | wk13 | PRDM1 | 639 | 9346 | 1.26 | 0.33 | 0.002 | 1.19337875412743e-99 | 4.02097037415698e-95 |
73 | 7 | Leu | Leukocyte | wk13 | BATF3 | 55509 | 28915 | 1.23 | 0.5 | 0.003 | 2.82796443048724e-148 | 9.52854335208372e-144 |
73 | 7 | Leu | Leukocyte | wk13 | ATF3 | 467 | 785 | 1.23 | 0.75 | 0.17 | 8.44976616825227e-09 | 0.000284706421273092 |
73 | 7 | Leu | Leukocyte | wk13 | DNASE1L3 | 1776 | 2959 | 1.22 | 0.25 | 0.001 | 1.83576338637488e-70 | 6.18542115405152e-66 |
73 | 7 | Leu | Leukocyte | wk13 | CALHM6 | 441168 | 33391 | 1.22 | 0.5 | 0.008 | 2.29456735522624e-67 | 7.73131524669928e-63 |
73 | 7 | Leu | Leukocyte | wk13 | AP1S2 | 8905 | 560 | 1.21 | 0.75 | 0.13 | 1.01120673363787e-10 | 3.40715996831943e-06 |
73 | 7 | Leu | Leukocyte | wk13 | CD53 | 963 | 1686 | 1.21 | 0.66 | 0 | 0 | 0 |
73 | 7 | Leu | Leukocyte | wk13 | PYCARD | 29108 | 16608 | 1.2 | 0.5 | 0.03 | 5.64826415372269e-19 | 1.90312612395532e-14 |
73 | 7 | Leu | Leukocyte | wk13 | CCL4 | 6351 | 10630 | 1.19 | 0.33 | 0 | 2.11491952039957e-247 | 7.1260098320343e-243 |
73 | 7 | Leu | Leukocyte | wk13 | CD44 | 960 | 1681 | 1.18 | 0.41 | 0.002 | 6.27502086107344e-141 | 2.11430552893008e-136 |
73 | 7 | Leu | Leukocyte | wk13 | FCGRT | 2217 | 3621 | 1.18 | 0.83 | 0.27 | 4.91619400247689e-08 | 0.00165646240719456 |
73 | 7 | Leu | Leukocyte | wk13 | RNASE2 | 6036 | 10045 | 1.18 | 0.33 | 0 | 2.11491952039957e-247 | 7.1260098320343e-243 |
73 | 7 | Leu | Leukocyte | wk13 | CLEC10A | 10462 | 16916 | 1.13 | 0.5 | 0 | 0 | 0 |
73 | 7 | Leu | Leukocyte | wk13 | CTSZ | 1522 | 2547 | 1.12 | 0.58 | 0.09 | 7.84208082271426e-10 | 2.64231071240534e-05 |
73 | 7 | Leu | Leukocyte | wk13 | NR4A3 | 8013 | 7982 | 1.12 | 0.58 | 0.01 | 2.9608002221683e-45 | 9.97612026857388e-41 |
73 | 7 | Leu | Leukocyte | wk13 | IGSF6 | 10261 | 5953 | 1.11 | 0.5 | 0.001 | 1.5841039241723e-277 | 5.33747976210615e-273 |
73 | 7 | Leu | Leukocyte | wk13 | CXCR4 | 7852 | 2561 | 1.1 | 0.66 | 0.17 | 1.25467579544195e-06 | 0.04 |
73 | 7 | Leu | Leukocyte | wk13 | HLA-E | 3133 | 4962 | 1.1 | 0.83 | 0.12 | 5.78293032879437e-14 | 1.94850054498397e-09 |
73 | 7 | Leu | Leukocyte | wk13 | STK17B | 9262 | 11396 | 1.09 | 0.58 | 0.04 | 2.37368177994085e-21 | 7.99788338933271e-17 |
73 | 7 | Leu | Leukocyte | wk13 | FXYD5 | 53827 | 4029 | 1.09 | 0.58 | 0.01 | 2.24392784421461e-47 | 7.5606904782967e-43 |
73 | 7 | Leu | Leukocyte | wk13 | IFI30 | 10437 | 5398 | 1.08 | 0.41 | 0.002 | 1.98732171826226e-119 | 6.69608179751285e-115 |
73 | 7 | Leu | Leukocyte | wk13 | CD1C | 911 | 1636 | 1.08 | 0.41 | 0 | 0 | 0 |
73 | 7 | Leu | Leukocyte | wk13 | PTPRC | 5788 | 9666 | 1.08 | 0.41 | 0.001 | 2.31143465607216e-193 | 7.78814793016952e-189 |
73 | 7 | Leu | Leukocyte | wk13 | GZF1 | 64412 | 15808 | 1.07 | 0.66 | 0.04 | 2.86042418894315e-26 | 9.63791326222504e-22 |
73 | 7 | Leu | Leukocyte | wk13 | PSMB9 | 5698 | 9546 | 1.07 | 0.25 | 0.005 | 1.01311458225601e-28 | 3.41358827345341e-24 |
73 | 7 | Leu | Leukocyte | wk13 | RPLP1 | 6176 | 10372 | 1.06 | 1 | 0.99 | 3.16953044070496e-09 | 0.000106794158669113 |
73 | 7 | Leu | Leukocyte | wk13 | LOC284454 | 284454 | NULL | 1.06 | 0.58 | 0.03 | 6.29167042055879e-25 | 2.11991543150308e-20 |
73 | 7 | Leu | Leukocyte | wk13 | FNIP1 | 96459 | 29418 | 1.06 | 0.66 | 0.15 | 2.04849015761751e-07 | 0.00690218273707643 |
73 | 7 | Leu | Leukocyte | wk13 | ALOX5 | 240 | 435 | 1.05 | 0.33 | 0.004 | 7.36424442956207e-59 | 2.48130851809664e-54 |
73 | 7 | Leu | Leukocyte | wk13 | RGS19 | 10287 | 13735 | 1.05 | 0.41 | 0.02 | 8.05966619224027e-20 | 2.71562392681344e-15 |