Marker Genes
Dataset: Single-cell transcriptomics reveals gene expression dynamics of human fetal kidney development
- tissue: Kidney
- ontology: Kidney
- genotype: -
- stage: Fetal
- treatment condition: WT
- cell/nucleus: Cells
- pmid: 30789893
- subset name: wk13
- total genes: Not reported
- clustering: scran
- pseudotime: Monocle 2
- link: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE114530
Rows:100
| dataset id | cluster id | cluster name | cell type name | sample id | gene symbol | entrez geneid | species specific geneid |
avg log fc (?)
|
pct 1 | pct 2 | p value | padj |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 73 | 6 | IPC | Interstitial progenitor cell | wk13 | LGALS1 | 3956 | 6561 | 2.56 | 0.92 | 0.06 | 1.1185300552496E-69 | 3.7687751681579E-65 |
| 73 | 6 | IPC | Interstitial progenitor cell | wk13 | TPM2 | 7169 | 12011 | 2.12 | 0.96 | 0.13 | 1.1098860730182E-40 | 3.7396501344277E-36 |
| 73 | 6 | IPC | Interstitial progenitor cell | wk13 | PCLAF | 9768 | 28961 | 2.06 | 0.92 | 0.18 | 5.5210153971958E-29 | 1.8602509279311E-24 |
| 73 | 6 | IPC | Interstitial progenitor cell | wk13 | COL1A1 | 1277 | 2197 | 2.06 | 0.92 | 0.07 | 1.8159424015854E-54 | 6.1186363279019E-50 |
| 73 | 6 | IPC | Interstitial progenitor cell | wk13 | PTN | 5764 | 9630 | 1.86 | 0.96 | 0.19 | 3.1006621543945E-25 | 1.0447371063017E-20 |
| 73 | 6 | IPC | Interstitial progenitor cell | wk13 | COL1A2 | 1278 | 2198 | 1.83 | 0.96 | 0.07 | 9.1546845197961E-60 | 3.0845794021001E-55 |
| 73 | 6 | IPC | Interstitial progenitor cell | wk13 | EMILIN1 | 11117 | 19880 | 1.77 | 0.76 | 0.06 | 2.3844950389339E-46 | 8.0343175841839E-42 |
| 73 | 6 | IPC | Interstitial progenitor cell | wk13 | PCOLCE | 5118 | 8738 | 1.74 | 0.84 | 0.03 | 1.8812934183599E-103 | 6.3388300438219E-99 |
| 73 | 6 | IPC | Interstitial progenitor cell | wk13 | CTSC | 1075 | 2528 | 1.72 | 0.84 | 0.15 | 2.9023034685518E-25 | 9.7790213069383E-21 |
| 73 | 6 | IPC | Interstitial progenitor cell | wk13 | TYMS | 7298 | 12441 | 1.63 | 0.88 | 0.14 | 1.7255075416035E-27 | 5.8139251106787E-23 |
| 73 | 6 | IPC | Interstitial progenitor cell | wk13 | RRM2 | 6241 | 10452 | 1.6 | 0.72 | 0.06 | 1.1131615722369E-40 | 3.7506866014948E-36 |
| 73 | 6 | IPC | Interstitial progenitor cell | wk13 | SULT1E1 | 6783 | 11377 | 1.52 | 0.6 | 0.05 | 1.5372457254956E-31 | 5.1795957474848E-27 |
| 73 | 6 | IPC | Interstitial progenitor cell | wk13 | CDK1 | 983 | 1722 | 1.51 | 0.76 | 0.09 | 1.7783122708879E-30 | 5.9918453655296E-26 |
| 73 | 6 | IPC | Interstitial progenitor cell | wk13 | PCDH18 | 54510 | 14268 | 1.49 | 0.68 | 0.03 | 1.9952772176236E-64 | 6.7228870570609E-60 |
| 73 | 6 | IPC | Interstitial progenitor cell | wk13 | EDNRA | 1909 | 3179 | 1.47 | 0.52 | 0.01 | 2.0358343342932E-65 | 6.8595402059676E-61 |
| 73 | 6 | IPC | Interstitial progenitor cell | wk13 | CALD1 | 800 | 1441 | 1.42 | 0.96 | 0.41 | 5.4274234637277E-16 | 1.8287160618684E-11 |
| 73 | 6 | IPC | Interstitial progenitor cell | wk13 | PCNA | 5111 | 8729 | 1.38 | 0.88 | 0.26 | 2.7484871011642E-16 | 9.2607524386625E-12 |
| 73 | 6 | IPC | Interstitial progenitor cell | wk13 | CLDN11 | 5010 | 8514 | 1.37 | 0.32 | 0.04 | 2.7888942672333E-12 | 9.396900344016E-8 |
| 73 | 6 | IPC | Interstitial progenitor cell | wk13 | IGF2 | 3481 | 5466 | 1.36 | 0.84 | 0.28 | 4.9193864848132E-14 | 1.657538082193E-9 |
| 73 | 6 | IPC | Interstitial progenitor cell | wk13 | TUBA1B | 10376 | 18809 | 1.33 | 1 | 0.78 | 7.3651030278491E-14 | 2.4815978142035E-9 |
| 73 | 6 | IPC | Interstitial progenitor cell | wk13 | COL3A1 | 1281 | 2201 | 1.33 | 0.88 | 0.28 | 1.1178638991407E-13 | 3.7665306217646E-9 |
| 73 | 6 | IPC | Interstitial progenitor cell | wk13 | HMGB2 | 3148 | 5000 | 1.32 | 0.88 | 0.38 | 1.3359106783316E-11 | 4.5012174395704E-7 |
| 73 | 6 | IPC | Interstitial progenitor cell | wk13 | UBE2C | 11065 | 15937 | 1.32 | 0.64 | 0.08 | 8.9100614267347E-22 | 3.002156097124E-17 |
| 73 | 6 | IPC | Interstitial progenitor cell | wk13 | OLFML3 | 56944 | 24956 | 1.3 | 0.56 | 0.02 | 4.9458341064651E-53 | 1.6664493438323E-48 |
| 73 | 6 | IPC | Interstitial progenitor cell | wk13 | TK1 | 7083 | 11830 | 1.29 | 0.68 | 0.07 | 7.4626490729539E-31 | 2.5144649786411E-26 |
| 73 | 6 | IPC | Interstitial progenitor cell | wk13 | ACTA2 | 59 | 130 | 1.27 | 0.32 | 0.02 | 5.3400019549016E-20 | 1.7992602586845E-15 |
| 73 | 6 | IPC | Interstitial progenitor cell | wk13 | RARRES2 | 5919 | 9868 | 1.27 | 0.68 | 0.05 | 3.1089503278512E-38 | 1.0475297234662E-33 |
| 73 | 6 | IPC | Interstitial progenitor cell | wk13 | SNAI2 | 6591 | 11094 | 1.26 | 0.6 | 0.03 | 7.4304715055767E-46 | 2.503623069089E-41 |
| 73 | 6 | IPC | Interstitial progenitor cell | wk13 | MEG3 | 55384 | 14575 | 1.26 | 0.6 | 0.06 | 2.8277083867669E-26 | 9.5276806383725E-22 |
| 73 | 6 | IPC | Interstitial progenitor cell | wk13 | H2AFZ | 3015 | 4741 | 1.25 | 1 | 0.81 | 2.4735248719279E-14 | 8.3342947034739E-10 |
| 73 | 6 | IPC | Interstitial progenitor cell | wk13 | C7 | 730 | 1346 | 1.22 | 0.36 | 0.006 | 2.7362044642747E-79 | 9.2193673219273E-75 |
| 73 | 6 | IPC | Interstitial progenitor cell | wk13 | BGN | 633 | 1044 | 1.22 | 0.68 | 0.14 | 7.0283065188994E-15 | 2.368117598478E-10 |
| 73 | 6 | IPC | Interstitial progenitor cell | wk13 | EMCN | 51705 | 16041 | 1.21 | 0.56 | 0.01 | 2.1719483586314E-91 | 7.3181627995726E-87 |
| 73 | 6 | IPC | Interstitial progenitor cell | wk13 | RBP1 | 5947 | 9919 | 1.2 | 0.8 | 0.28 | 4.1400398502143E-12 | 1.3949450271312E-7 |
| 73 | 6 | IPC | Interstitial progenitor cell | wk13 | CYP1B1 | 1545 | 2597 | 1.2 | 0.6 | 0.09 | 1.6339610468962E-18 | 5.5054683514121E-14 |
| 73 | 6 | IPC | Interstitial progenitor cell | wk13 | FBLN1 | 2192 | 3600 | 1.2 | 0.72 | 0.17 | 1.2380884803536E-14 | 4.1716153257034E-10 |
| 73 | 6 | IPC | Interstitial progenitor cell | wk13 | TPM4 | 7171 | 12013 | 1.2 | 0.72 | 0.2 | 2.8992755626833E-12 | 9.7688190809051E-8 |
| 73 | 6 | IPC | Interstitial progenitor cell | wk13 | PRSS23 | 11098 | 14370 | 1.2 | 0.56 | 0.04 | 2.9104657364809E-36 | 9.8065232524989E-32 |
| 73 | 6 | IPC | Interstitial progenitor cell | wk13 | COL21A1 | 81578 | 17025 | 1.19 | 0.36 | 0.008 | 6.0862851658899E-66 | 2.050712923795E-61 |
| 73 | 6 | IPC | Interstitial progenitor cell | wk13 | DNAJC9 | 23234 | 19123 | 1.19 | 0.76 | 0.14 | 3.9770785629143E-20 | 1.3400368509883E-15 |
| 73 | 6 | IPC | Interstitial progenitor cell | wk13 | PLAT | 5327 | 9051 | 1.19 | 0.4 | 0.07 | 6.6199498135621E-10 | 2.2305258901816E-5 |
| 73 | 6 | IPC | Interstitial progenitor cell | wk13 | MYH10 | 4628 | 7568 | 1.18 | 0.68 | 0.21 | 5.2225016153763E-11 | 1.7596696942849E-6 |
| 73 | 6 | IPC | Interstitial progenitor cell | wk13 | MAD2L1 | 4085 | 6763 | 1.18 | 0.76 | 0.15 | 1.712247081552E-18 | 5.7692453165813E-14 |
| 73 | 6 | IPC | Interstitial progenitor cell | wk13 | MGP | 4256 | 7060 | 1.14 | 0.16 | 0.002 | 6.048441952594E-40 | 2.037962031507E-35 |
| 73 | 6 | IPC | Interstitial progenitor cell | wk13 | RANBP1 | 5902 | 9847 | 1.13 | 0.92 | 0.56 | 3.5358084891651E-12 | 1.1913553123393E-7 |
| 73 | 6 | IPC | Interstitial progenitor cell | wk13 | DUT | 1854 | 3078 | 1.11 | 0.88 | 0.49 | 2.0371680160168E-9 | 6.8640339131669E-5 |
| 73 | 6 | IPC | Interstitial progenitor cell | wk13 | MFAP4 | 4239 | 7035 | 1.11 | 0.48 | 0.04 | 3.9076547453048E-25 | 1.316645189883E-20 |
| 73 | 6 | IPC | Interstitial progenitor cell | wk13 | MOXD1 | 26002 | 21063 | 1.1 | 0.4 | 0.02 | 1.3200518967054E-33 | 4.4477828607592E-29 |
| 73 | 6 | IPC | Interstitial progenitor cell | wk13 | CENPK | 64105 | 29479 | 1.1 | 0.6 | 0.05 | 1.1600679644094E-29 | 3.9087329992812E-25 |
| 73 | 6 | IPC | Interstitial progenitor cell | wk13 | TOP2A | 7153 | 11989 | 1.09 | 0.44 | 0.09 | 1.646640545284E-9 | 5.5481906532801E-5 |
| 73 | 6 | IPC | Interstitial progenitor cell | wk13 | UHRF1 | 29128 | 12556 | 1.08 | 0.52 | 0.09 | 1.4410209188027E-14 | 4.8553758838138E-10 |
| 73 | 6 | IPC | Interstitial progenitor cell | wk13 | AGTR2 | 186 | 338 | 1.06 | 0.48 | 0.009 | 4.9933038305431E-95 | 1.6824437926632E-90 |
| 73 | 6 | IPC | Interstitial progenitor cell | wk13 | B2M | 567 | 914 | 1.05 | 0.96 | 0.56 | 4.2725865296159E-9 | 0.00014396053052888 |
| 73 | 6 | IPC | Interstitial progenitor cell | wk13 | TNC | 3371 | 5318 | 1.05 | 0.36 | 0.01 | 1.9994127196012E-37 | 6.7368212174243E-33 |
| 73 | 6 | IPC | Interstitial progenitor cell | wk13 | SERPINH1 | 871 | 1546 | 1.05 | 0.88 | 0.46 | 1.9822707042683E-9 | 6.6790629109615E-5 |
| 73 | 6 | IPC | Interstitial progenitor cell | wk13 | A2M | 2 | 7 | 1.05 | 0.28 | 0.008 | 1.7604335197683E-42 | 5.9316047015075E-38 |
| 73 | 6 | IPC | Interstitial progenitor cell | wk13 | EMP2 | 2013 | 3334 | 1.03 | 0.32 | 0.06 | 1.2439210222536E-7 | 0.0041912674923815 |
| 73 | 6 | IPC | Interstitial progenitor cell | wk13 | TUBB6 | 84617 | 20776 | 1.03 | 0.68 | 0.09 | 1.892658091149E-22 | 6.3771221723176E-18 |
| 73 | 6 | IPC | Interstitial progenitor cell | wk13 | COL6A3 | 1293 | 2213 | 1.03 | 0.44 | 0.02 | 1.5303370516774E-42 | 5.1563176619217E-38 |
| 73 | 6 | IPC | Interstitial progenitor cell | wk13 | FABP5 | 2171 | 3560 | 1.01 | 0.68 | 0.26 | 2.2511132617621E-8 | 0.00075849010241811 |
| 73 | 6 | IPC | Interstitial progenitor cell | wk13 | MCM7 | 4176 | 6950 | 1 | 0.68 | 0.24 | 6.3208990259084E-9 | 0.00021297637177896 |
| 73 | 6 | IPC | Interstitial progenitor cell | wk13 | HIST1H4C | 8364 | 4787 | 1 | 0.52 | 0.07 | 2.0359159280485E-16 | 6.8598151279667E-12 |
| 73 | 6 | IPC | Interstitial progenitor cell | wk13 | GINS2 | 51659 | 24575 | 0.99 | 0.44 | 0.09 | 1.6871626307823E-9 | 5.684725768158E-5 |
| 73 | 6 | IPC | Interstitial progenitor cell | wk13 | SPC25 | 57405 | 24031 | 0.97 | 0.44 | 0.04 | 2.4885958513436E-20 | 8.3850748615172E-16 |
| 73 | 6 | IPC | Interstitial progenitor cell | wk13 | THY1 | 7070 | 11801 | 0.97 | 0.4 | 0.03 | 2.662702527841E-23 | 8.9717098973074E-19 |
| 73 | 6 | IPC | Interstitial progenitor cell | wk13 | EDNRB | 1910 | 3180 | 0.97 | 0.28 | 0.01 | 3.3377407057632E-24 | 1.1246183533998E-19 |
| 73 | 6 | IPC | Interstitial progenitor cell | wk13 | LDHA | 3939 | 6535 | 0.97 | 0.92 | 0.4 | 2.878739881368E-12 | 9.6996261562813E-8 |
| 73 | 6 | IPC | Interstitial progenitor cell | wk13 | CDC45 | 8318 | 1739 | 0.96 | 0.44 | 0.03 | 8.5944200383488E-27 | 2.8958038877212E-22 |
| 73 | 6 | IPC | Interstitial progenitor cell | wk13 | C12orf57 | 113246 | 29521 | 0.95 | 0.8 | 0.3 | 5.7861779577915E-11 | 1.9495948010983E-6 |
| 73 | 6 | IPC | Interstitial progenitor cell | wk13 | MARCKS | 4082 | 6759 | 0.95 | 0.84 | 0.44 | 1.2955498454779E-7 | 0.0043652256493534 |
| 73 | 6 | IPC | Interstitial progenitor cell | wk13 | ALDH1A2 | 8854 | 15472 | 0.95 | 0.68 | 0.21 | 1.5852034115253E-9 | 5.3411843747935E-5 |
| 73 | 6 | IPC | Interstitial progenitor cell | wk13 | ZWINT | 11130 | 13195 | 0.95 | 0.6 | 0.13 | 3.2478917290355E-12 | 1.0943446391812E-7 |
| 73 | 6 | IPC | Interstitial progenitor cell | wk13 | NUSAP1 | 51203 | 18538 | 0.94 | 0.56 | 0.1 | 2.7761932615228E-13 | 9.3541055753748E-9 |
| 73 | 6 | IPC | Interstitial progenitor cell | wk13 | AKAP12 | 9590 | 370 | 0.94 | 0.72 | 0.24 | 3.1193486278198E-9 | 0.00010510333266576 |
| 73 | 6 | IPC | Interstitial progenitor cell | wk13 | HMGB1 | 3146 | 4983 | 0.94 | 1 | 0.93 | 2.4434383305651E-12 | 8.232921111006E-8 |
| 73 | 6 | IPC | Interstitial progenitor cell | wk13 | NID1 | 4811 | 7821 | 0.93 | 0.56 | 0.13 | 7.3565829285501E-11 | 2.4787270519457E-6 |
| 73 | 6 | IPC | Interstitial progenitor cell | wk13 | ASF1B | 55723 | 20996 | 0.92 | 0.4 | 0.04 | 1.1453092318488E-16 | 3.8590049257913E-12 |
| 73 | 6 | IPC | Interstitial progenitor cell | wk13 | ATP2B1 | 490 | 814 | 0.92 | 0.72 | 0.32 | 1.0325368391741E-6 | 0.03 |
| 73 | 6 | IPC | Interstitial progenitor cell | wk13 | S1PR3 | 1903 | 3167 | 0.92 | 0.48 | 0.01 | 5.9168780832794E-82 | 1.9936329013802E-77 |
| 73 | 6 | IPC | Interstitial progenitor cell | wk13 | MDFI | 4188 | 6967 | 0.91 | 0.4 | 0.02 | 5.8514173293888E-33 | 1.9715765549642E-28 |
| 73 | 6 | IPC | Interstitial progenitor cell | wk13 | TUBB | 203068 | 20778 | 0.91 | 1 | 0.86 | 2.5250913668958E-11 | 8.5080428516186E-7 |
| 73 | 6 | IPC | Interstitial progenitor cell | wk13 | FLRT2 | 23768 | 3761 | 0.91 | 0.48 | 0.04 | 2.8051974136616E-22 | 9.4518321655914E-18 |
| 73 | 6 | IPC | Interstitial progenitor cell | wk13 | POSTN | 10631 | 16953 | 0.91 | 0.16 | 0.007 | 5.4033562311136E-18 | 1.8206068485114E-13 |
| 73 | 6 | IPC | Interstitial progenitor cell | wk13 | CPED1 | 79974 | 26159 | 0.91 | 0.32 | 0.009 | 5.2891319115336E-48 | 1.7821201062721E-43 |
| 73 | 6 | IPC | Interstitial progenitor cell | wk13 | GLO1 | 2739 | 4323 | 0.9 | 0.96 | 0.38 | 6.2853290291755E-11 | 2.1177787630904E-6 |
| 73 | 6 | IPC | Interstitial progenitor cell | wk13 | LDB2 | 9079 | 6533 | 0.9 | 0.48 | 0.02 | 2.7189144842714E-42 | 9.1611104633041E-38 |
| 73 | 6 | IPC | Interstitial progenitor cell | wk13 | NR2F2 | 7026 | 7976 | 0.89 | 0.88 | 0.45 | 9.0258941571599E-8 | 0.0030411847773135 |
| 73 | 6 | IPC | Interstitial progenitor cell | wk13 | TMEM106C | 79022 | 28775 | 0.89 | 0.64 | 0.17 | 3.3006233221792E-10 | 1.1121120221751E-5 |
| 73 | 6 | IPC | Interstitial progenitor cell | wk13 | TMEM97 | 27346 | 28106 | 0.89 | 0.48 | 0.15 | 4.9211380607765E-7 | 0.01 |
| 73 | 6 | IPC | Interstitial progenitor cell | wk13 | NENF | 29937 | 30384 | 0.88 | 0.6 | 0.16 | 3.3077235727826E-10 | 1.1145043806134E-5 |
| 73 | 6 | IPC | Interstitial progenitor cell | wk13 | HMGN2 | 3151 | 4986 | 0.88 | 1 | 0.89 | 1.0050315966065E-9 | 3.3863534616058E-5 |
| 73 | 6 | IPC | Interstitial progenitor cell | wk13 | PDGFRA | 5156 | 8803 | 0.88 | 0.36 | 0.01 | 3.903473072782E-52 | 1.3152362171432E-47 |
| 73 | 6 | IPC | Interstitial progenitor cell | wk13 | MYBL2 | 4605 | 7548 | 0.88 | 0.32 | 0.03 | 4.400654110159E-17 | 1.482756395877E-12 |
| 73 | 6 | IPC | Interstitial progenitor cell | wk13 | IDH2 | 3418 | 5383 | 0.88 | 0.76 | 0.31 | 9.4325872914128E-8 | 0.0031782159619686 |
| 73 | 6 | IPC | Interstitial progenitor cell | wk13 | SMC4 | 10051 | 14013 | 0.87 | 0.64 | 0.18 | 1.0947898130655E-9 | 3.6887847961429E-5 |
| 73 | 6 | IPC | Interstitial progenitor cell | wk13 | H2AFX | 3014 | 4739 | 0.85 | 0.64 | 0.24 | 7.7208822711626E-7 | 0.02 |
| 73 | 6 | IPC | Interstitial progenitor cell | wk13 | LRRC17 | 10234 | 16895 | 0.85 | 0.28 | 0.01 | 6.8034139899874E-26 | 2.2923423097864E-21 |
| 73 | 6 | IPC | Interstitial progenitor cell | wk13 | FBLN5 | 10516 | 3602 | 0.85 | 0.32 | 0.02 | 2.9944988071122E-19 | 1.0089664280684E-14 |
| 73 | 6 | IPC | Interstitial progenitor cell | wk13 | CDH11 | 1009 | 1750 | 0.85 | 0.44 | 0.07 | 2.0508215882826E-12 | 6.9100382595593E-8 |
| 73 | 6 | IPC | Interstitial progenitor cell | wk13 | SYT1 | 6857 | 11509 | 0.85 | 0.36 | 0.05 | 6.6217575554014E-12 | 2.231134990717E-7 |