Marker Genes
Dataset: Single-cell transcriptomics reveals gene expression dynamics of human fetal kidney development
- tissue: Kidney
- ontology: Kidney
- genotype: -
- stage: Fetal
- treatment condition: WT
- cell/nucleus: Cells
- pmid: 30789893
- subset name: wk13
- total genes: Not reported
- clustering: scran
- pseudotime: Monocle 2
- link: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE114530
Rows:100
dataset id | cluster id | cluster name | cell type name | sample id | gene symbol | entrez geneid | species specific geneid |
avg log fc (?)
|
pct 1 | pct 2 | p value | padj |
---|---|---|---|---|---|---|---|---|---|---|---|---|
73 | 6 | IPC | Interstitial progenitor cell | wk13 | LGALS1 | 3956 | 6561 | 2.56 | 0.92 | 0.06 | 1.11853005524957e-69 | 3.7687751681579e-65 |
73 | 6 | IPC | Interstitial progenitor cell | wk13 | TPM2 | 7169 | 12011 | 2.12 | 0.96 | 0.13 | 1.10988607301824e-40 | 3.73965013442766e-36 |
73 | 6 | IPC | Interstitial progenitor cell | wk13 | PCLAF | 9768 | 28961 | 2.06 | 0.92 | 0.18 | 5.52101539719575e-29 | 1.86025092793114e-24 |
73 | 6 | IPC | Interstitial progenitor cell | wk13 | COL1A1 | 1277 | 2197 | 2.06 | 0.92 | 0.07 | 1.81594240158541e-54 | 6.11863632790188e-50 |
73 | 6 | IPC | Interstitial progenitor cell | wk13 | PTN | 5764 | 9630 | 1.86 | 0.96 | 0.19 | 3.10066215439446e-25 | 1.04473710630167e-20 |
73 | 6 | IPC | Interstitial progenitor cell | wk13 | COL1A2 | 1278 | 2198 | 1.83 | 0.96 | 0.07 | 9.15468451979611e-60 | 3.0845794021001e-55 |
73 | 6 | IPC | Interstitial progenitor cell | wk13 | EMILIN1 | 11117 | 19880 | 1.77 | 0.76 | 0.06 | 2.3844950389339e-46 | 8.03431758418389e-42 |
73 | 6 | IPC | Interstitial progenitor cell | wk13 | PCOLCE | 5118 | 8738 | 1.74 | 0.84 | 0.03 | 1.88129341835991e-103 | 6.33883004382188e-99 |
73 | 6 | IPC | Interstitial progenitor cell | wk13 | CTSC | 1075 | 2528 | 1.72 | 0.84 | 0.15 | 2.90230346855176e-25 | 9.7790213069383e-21 |
73 | 6 | IPC | Interstitial progenitor cell | wk13 | TYMS | 7298 | 12441 | 1.63 | 0.88 | 0.14 | 1.72550754160346e-27 | 5.81392511067868e-23 |
73 | 6 | IPC | Interstitial progenitor cell | wk13 | RRM2 | 6241 | 10452 | 1.6 | 0.72 | 0.06 | 1.11316157223685e-40 | 3.75068660149483e-36 |
73 | 6 | IPC | Interstitial progenitor cell | wk13 | SULT1E1 | 6783 | 11377 | 1.52 | 0.6 | 0.05 | 1.53724572549558e-31 | 5.1795957474848e-27 |
73 | 6 | IPC | Interstitial progenitor cell | wk13 | CDK1 | 983 | 1722 | 1.51 | 0.76 | 0.09 | 1.77831227088787e-30 | 5.99184536552958e-26 |
73 | 6 | IPC | Interstitial progenitor cell | wk13 | PCDH18 | 54510 | 14268 | 1.49 | 0.68 | 0.03 | 1.99527721762358e-64 | 6.72288705706089e-60 |
73 | 6 | IPC | Interstitial progenitor cell | wk13 | EDNRA | 1909 | 3179 | 1.47 | 0.52 | 0.01 | 2.03583433429324e-65 | 6.85954020596764e-61 |
73 | 6 | IPC | Interstitial progenitor cell | wk13 | CALD1 | 800 | 1441 | 1.42 | 0.96 | 0.41 | 5.42742346372773e-16 | 1.82871606186842e-11 |
73 | 6 | IPC | Interstitial progenitor cell | wk13 | PCNA | 5111 | 8729 | 1.38 | 0.88 | 0.26 | 2.74848710116415e-16 | 9.26075243866249e-12 |
73 | 6 | IPC | Interstitial progenitor cell | wk13 | CLDN11 | 5010 | 8514 | 1.37 | 0.32 | 0.04 | 2.78889426723333e-12 | 9.39690034401598e-08 |
73 | 6 | IPC | Interstitial progenitor cell | wk13 | IGF2 | 3481 | 5466 | 1.36 | 0.84 | 0.28 | 4.9193864848132e-14 | 1.65753808219296e-09 |
73 | 6 | IPC | Interstitial progenitor cell | wk13 | TUBA1B | 10376 | 18809 | 1.33 | 1 | 0.78 | 7.36510302784905e-14 | 2.48159781420346e-09 |
73 | 6 | IPC | Interstitial progenitor cell | wk13 | COL3A1 | 1281 | 2201 | 1.33 | 0.88 | 0.28 | 1.11786389914068e-13 | 3.76653062176461e-09 |
73 | 6 | IPC | Interstitial progenitor cell | wk13 | HMGB2 | 3148 | 5000 | 1.32 | 0.88 | 0.38 | 1.33591067833158e-11 | 4.50121743957044e-07 |
73 | 6 | IPC | Interstitial progenitor cell | wk13 | UBE2C | 11065 | 15937 | 1.32 | 0.64 | 0.08 | 8.91006142673469e-22 | 3.00215609712399e-17 |
73 | 6 | IPC | Interstitial progenitor cell | wk13 | OLFML3 | 56944 | 24956 | 1.3 | 0.56 | 0.02 | 4.94583410646507e-53 | 1.66644934383234e-48 |
73 | 6 | IPC | Interstitial progenitor cell | wk13 | TK1 | 7083 | 11830 | 1.29 | 0.68 | 0.07 | 7.46264907295387e-31 | 2.51446497864108e-26 |
73 | 6 | IPC | Interstitial progenitor cell | wk13 | ACTA2 | 59 | 130 | 1.27 | 0.32 | 0.02 | 5.3400019549016e-20 | 1.79926025868455e-15 |
73 | 6 | IPC | Interstitial progenitor cell | wk13 | RARRES2 | 5919 | 9868 | 1.27 | 0.68 | 0.05 | 3.10895032785119e-38 | 1.04752972346618e-33 |
73 | 6 | IPC | Interstitial progenitor cell | wk13 | SNAI2 | 6591 | 11094 | 1.26 | 0.6 | 0.03 | 7.43047150557668e-46 | 2.50362306908901e-41 |
73 | 6 | IPC | Interstitial progenitor cell | wk13 | MEG3 | 55384 | 14575 | 1.26 | 0.6 | 0.06 | 2.82770838676694e-26 | 9.52768063837252e-22 |
73 | 6 | IPC | Interstitial progenitor cell | wk13 | H2AFZ | 3015 | 4741 | 1.25 | 1 | 0.81 | 2.47352487192791e-14 | 8.3342947034739e-10 |
73 | 6 | IPC | Interstitial progenitor cell | wk13 | C7 | 730 | 1346 | 1.22 | 0.36 | 0.006 | 2.73620446427473e-79 | 9.21936732192726e-75 |
73 | 6 | IPC | Interstitial progenitor cell | wk13 | BGN | 633 | 1044 | 1.22 | 0.68 | 0.14 | 7.02830651889939e-15 | 2.36811759847796e-10 |
73 | 6 | IPC | Interstitial progenitor cell | wk13 | EMCN | 51705 | 16041 | 1.21 | 0.56 | 0.01 | 2.17194835863139e-91 | 7.3181627995726e-87 |
73 | 6 | IPC | Interstitial progenitor cell | wk13 | RBP1 | 5947 | 9919 | 1.2 | 0.8 | 0.28 | 4.14003985021425e-12 | 1.39494502713119e-07 |
73 | 6 | IPC | Interstitial progenitor cell | wk13 | CYP1B1 | 1545 | 2597 | 1.2 | 0.6 | 0.09 | 1.63396104689621e-18 | 5.50546835141208e-14 |
73 | 6 | IPC | Interstitial progenitor cell | wk13 | FBLN1 | 2192 | 3600 | 1.2 | 0.72 | 0.17 | 1.23808848035359e-14 | 4.17161532570337e-10 |
73 | 6 | IPC | Interstitial progenitor cell | wk13 | TPM4 | 7171 | 12013 | 1.2 | 0.72 | 0.2 | 2.8992755626833e-12 | 9.76881908090512e-08 |
73 | 6 | IPC | Interstitial progenitor cell | wk13 | PRSS23 | 11098 | 14370 | 1.2 | 0.56 | 0.04 | 2.91046573648094e-36 | 9.80652325249886e-32 |
73 | 6 | IPC | Interstitial progenitor cell | wk13 | COL21A1 | 81578 | 17025 | 1.19 | 0.36 | 0.008 | 6.08628516588994e-66 | 2.05071292379496e-61 |
73 | 6 | IPC | Interstitial progenitor cell | wk13 | DNAJC9 | 23234 | 19123 | 1.19 | 0.76 | 0.14 | 3.97707856291429e-20 | 1.34003685098834e-15 |
73 | 6 | IPC | Interstitial progenitor cell | wk13 | PLAT | 5327 | 9051 | 1.19 | 0.4 | 0.07 | 6.61994981356214e-10 | 2.23052589018163e-05 |
73 | 6 | IPC | Interstitial progenitor cell | wk13 | MYH10 | 4628 | 7568 | 1.18 | 0.68 | 0.21 | 5.22250161537631e-11 | 1.75966969428489e-06 |
73 | 6 | IPC | Interstitial progenitor cell | wk13 | MAD2L1 | 4085 | 6763 | 1.18 | 0.76 | 0.15 | 1.71224708155199e-18 | 5.76924531658127e-14 |
73 | 6 | IPC | Interstitial progenitor cell | wk13 | MGP | 4256 | 7060 | 1.14 | 0.16 | 0.002 | 6.04844195259401e-40 | 2.03796203150703e-35 |
73 | 6 | IPC | Interstitial progenitor cell | wk13 | RANBP1 | 5902 | 9847 | 1.13 | 0.92 | 0.56 | 3.53580848916514e-12 | 1.1913553123393e-07 |
73 | 6 | IPC | Interstitial progenitor cell | wk13 | DUT | 1854 | 3078 | 1.11 | 0.88 | 0.49 | 2.03716801601676e-09 | 6.86403391316689e-05 |
73 | 6 | IPC | Interstitial progenitor cell | wk13 | MFAP4 | 4239 | 7035 | 1.11 | 0.48 | 0.04 | 3.90765474530485e-25 | 1.31664518988302e-20 |
73 | 6 | IPC | Interstitial progenitor cell | wk13 | MOXD1 | 26002 | 21063 | 1.1 | 0.4 | 0.02 | 1.3200518967054e-33 | 4.44778286075917e-29 |
73 | 6 | IPC | Interstitial progenitor cell | wk13 | CENPK | 64105 | 29479 | 1.1 | 0.6 | 0.05 | 1.16006796440945e-29 | 3.9087329992812e-25 |
73 | 6 | IPC | Interstitial progenitor cell | wk13 | TOP2A | 7153 | 11989 | 1.09 | 0.44 | 0.09 | 1.64664054528405e-09 | 5.54819065328009e-05 |
73 | 6 | IPC | Interstitial progenitor cell | wk13 | UHRF1 | 29128 | 12556 | 1.08 | 0.52 | 0.09 | 1.44102091880269e-14 | 4.85537588381378e-10 |
73 | 6 | IPC | Interstitial progenitor cell | wk13 | AGTR2 | 186 | 338 | 1.06 | 0.48 | 0.009 | 4.99330383054308e-95 | 1.68244379266319e-90 |
73 | 6 | IPC | Interstitial progenitor cell | wk13 | B2M | 567 | 914 | 1.05 | 0.96 | 0.56 | 4.27258652961591e-09 | 0.000143960530528878 |
73 | 6 | IPC | Interstitial progenitor cell | wk13 | TNC | 3371 | 5318 | 1.05 | 0.36 | 0.01 | 1.9994127196012e-37 | 6.73682121742429e-33 |
73 | 6 | IPC | Interstitial progenitor cell | wk13 | SERPINH1 | 871 | 1546 | 1.05 | 0.88 | 0.46 | 1.98227070426826e-09 | 6.67906291096147e-05 |
73 | 6 | IPC | Interstitial progenitor cell | wk13 | A2M | 2 | 7 | 1.05 | 0.28 | 0.008 | 1.76043351976835e-42 | 5.93160470150748e-38 |
73 | 6 | IPC | Interstitial progenitor cell | wk13 | EMP2 | 2013 | 3334 | 1.03 | 0.32 | 0.06 | 1.24392102225365e-07 | 0.00419126749238145 |
73 | 6 | IPC | Interstitial progenitor cell | wk13 | TUBB6 | 84617 | 20776 | 1.03 | 0.68 | 0.09 | 1.89265809114903e-22 | 6.37712217231755e-18 |
73 | 6 | IPC | Interstitial progenitor cell | wk13 | COL6A3 | 1293 | 2213 | 1.03 | 0.44 | 0.02 | 1.53033705167736e-42 | 5.15631766192169e-38 |
73 | 6 | IPC | Interstitial progenitor cell | wk13 | FABP5 | 2171 | 3560 | 1.01 | 0.68 | 0.26 | 2.25111326176206e-08 | 0.000758490102418109 |
73 | 6 | IPC | Interstitial progenitor cell | wk13 | MCM7 | 4176 | 6950 | 1 | 0.68 | 0.24 | 6.32089902590837e-09 | 0.000212976371778957 |
73 | 6 | IPC | Interstitial progenitor cell | wk13 | HIST1H4C | 8364 | 4787 | 1 | 0.52 | 0.07 | 2.03591592804854e-16 | 6.85981512796674e-12 |
73 | 6 | IPC | Interstitial progenitor cell | wk13 | GINS2 | 51659 | 24575 | 0.99 | 0.44 | 0.09 | 1.68716263078234e-09 | 5.68472576815801e-05 |
73 | 6 | IPC | Interstitial progenitor cell | wk13 | SPC25 | 57405 | 24031 | 0.97 | 0.44 | 0.04 | 2.48859585134363e-20 | 8.38507486151721e-16 |
73 | 6 | IPC | Interstitial progenitor cell | wk13 | THY1 | 7070 | 11801 | 0.97 | 0.4 | 0.03 | 2.66270252784097e-23 | 8.97170989730736e-19 |
73 | 6 | IPC | Interstitial progenitor cell | wk13 | EDNRB | 1910 | 3180 | 0.97 | 0.28 | 0.01 | 3.33774070576319e-24 | 1.12461835339985e-19 |
73 | 6 | IPC | Interstitial progenitor cell | wk13 | LDHA | 3939 | 6535 | 0.97 | 0.92 | 0.4 | 2.87873988136799e-12 | 9.69962615628129e-08 |
73 | 6 | IPC | Interstitial progenitor cell | wk13 | CDC45 | 8318 | 1739 | 0.96 | 0.44 | 0.03 | 8.59442003834879e-27 | 2.89580388772124e-22 |
73 | 6 | IPC | Interstitial progenitor cell | wk13 | C12orf57 | 113246 | 29521 | 0.95 | 0.8 | 0.3 | 5.78617795779152e-11 | 1.94959480109827e-06 |
73 | 6 | IPC | Interstitial progenitor cell | wk13 | MARCKS | 4082 | 6759 | 0.95 | 0.84 | 0.44 | 1.29554984547794e-07 | 0.00436522564935337 |
73 | 6 | IPC | Interstitial progenitor cell | wk13 | ALDH1A2 | 8854 | 15472 | 0.95 | 0.68 | 0.21 | 1.58520341152534e-09 | 5.34118437479349e-05 |
73 | 6 | IPC | Interstitial progenitor cell | wk13 | ZWINT | 11130 | 13195 | 0.95 | 0.6 | 0.13 | 3.2478917290355e-12 | 1.09434463918122e-07 |
73 | 6 | IPC | Interstitial progenitor cell | wk13 | NUSAP1 | 51203 | 18538 | 0.94 | 0.56 | 0.1 | 2.77619326152277e-13 | 9.35410557537483e-09 |
73 | 6 | IPC | Interstitial progenitor cell | wk13 | AKAP12 | 9590 | 370 | 0.94 | 0.72 | 0.24 | 3.11934862781985e-09 | 0.000105103332665762 |
73 | 6 | IPC | Interstitial progenitor cell | wk13 | HMGB1 | 3146 | 4983 | 0.94 | 1 | 0.93 | 2.44343833056508e-12 | 8.23292111100597e-08 |
73 | 6 | IPC | Interstitial progenitor cell | wk13 | NID1 | 4811 | 7821 | 0.93 | 0.56 | 0.13 | 7.35658292855012e-11 | 2.47872705194568e-06 |
73 | 6 | IPC | Interstitial progenitor cell | wk13 | ASF1B | 55723 | 20996 | 0.92 | 0.4 | 0.04 | 1.14530923184878e-16 | 3.85900492579127e-12 |
73 | 6 | IPC | Interstitial progenitor cell | wk13 | ATP2B1 | 490 | 814 | 0.92 | 0.72 | 0.32 | 1.03253683917411e-06 | 0.03 |
73 | 6 | IPC | Interstitial progenitor cell | wk13 | S1PR3 | 1903 | 3167 | 0.92 | 0.48 | 0.01 | 5.91687808327939e-82 | 1.99363290138016e-77 |
73 | 6 | IPC | Interstitial progenitor cell | wk13 | MDFI | 4188 | 6967 | 0.91 | 0.4 | 0.02 | 5.85141732938877e-33 | 1.97157655496425e-28 |
73 | 6 | IPC | Interstitial progenitor cell | wk13 | TUBB | 203068 | 20778 | 0.91 | 1 | 0.86 | 2.52509136689576e-11 | 8.50804285161857e-07 |
73 | 6 | IPC | Interstitial progenitor cell | wk13 | FLRT2 | 23768 | 3761 | 0.91 | 0.48 | 0.04 | 2.80519741366161e-22 | 9.45183216559143e-18 |
73 | 6 | IPC | Interstitial progenitor cell | wk13 | POSTN | 10631 | 16953 | 0.91 | 0.16 | 0.007 | 5.4033562311136e-18 | 1.82060684851142e-13 |
73 | 6 | IPC | Interstitial progenitor cell | wk13 | CPED1 | 79974 | 26159 | 0.91 | 0.32 | 0.009 | 5.28913191153358e-48 | 1.78212010627213e-43 |
73 | 6 | IPC | Interstitial progenitor cell | wk13 | GLO1 | 2739 | 4323 | 0.9 | 0.96 | 0.38 | 6.2853290291755e-11 | 2.11777876309039e-06 |
73 | 6 | IPC | Interstitial progenitor cell | wk13 | LDB2 | 9079 | 6533 | 0.9 | 0.48 | 0.02 | 2.71891448427142e-42 | 9.16111046330413e-38 |
73 | 6 | IPC | Interstitial progenitor cell | wk13 | NR2F2 | 7026 | 7976 | 0.89 | 0.88 | 0.45 | 9.02589415715994e-08 | 0.00304118477731347 |
73 | 6 | IPC | Interstitial progenitor cell | wk13 | TMEM106C | 79022 | 28775 | 0.89 | 0.64 | 0.17 | 3.3006233221792e-10 | 1.11211202217506e-05 |
73 | 6 | IPC | Interstitial progenitor cell | wk13 | TMEM97 | 27346 | 28106 | 0.89 | 0.48 | 0.15 | 4.92113806077653e-07 | 0.01 |
73 | 6 | IPC | Interstitial progenitor cell | wk13 | NENF | 29937 | 30384 | 0.88 | 0.6 | 0.16 | 3.30772357278262e-10 | 1.11450438061337e-05 |
73 | 6 | IPC | Interstitial progenitor cell | wk13 | HMGN2 | 3151 | 4986 | 0.88 | 1 | 0.89 | 1.00503159660645e-09 | 3.38635346160578e-05 |
73 | 6 | IPC | Interstitial progenitor cell | wk13 | PDGFRA | 5156 | 8803 | 0.88 | 0.36 | 0.01 | 3.90347307278204e-52 | 1.31523621714318e-47 |
73 | 6 | IPC | Interstitial progenitor cell | wk13 | MYBL2 | 4605 | 7548 | 0.88 | 0.32 | 0.03 | 4.40065411015899e-17 | 1.48275639587697e-12 |
73 | 6 | IPC | Interstitial progenitor cell | wk13 | IDH2 | 3418 | 5383 | 0.88 | 0.76 | 0.31 | 9.43258729141275e-08 | 0.00317821596196861 |
73 | 6 | IPC | Interstitial progenitor cell | wk13 | SMC4 | 10051 | 14013 | 0.87 | 0.64 | 0.18 | 1.09478981306549e-09 | 3.68878479614287e-05 |
73 | 6 | IPC | Interstitial progenitor cell | wk13 | H2AFX | 3014 | 4739 | 0.85 | 0.64 | 0.24 | 7.72088227116256e-07 | 0.02 |
73 | 6 | IPC | Interstitial progenitor cell | wk13 | LRRC17 | 10234 | 16895 | 0.85 | 0.28 | 0.01 | 6.80341398998742e-26 | 2.29234230978636e-21 |
73 | 6 | IPC | Interstitial progenitor cell | wk13 | FBLN5 | 10516 | 3602 | 0.85 | 0.32 | 0.02 | 2.99449880711218e-19 | 1.00896642806838e-14 |
73 | 6 | IPC | Interstitial progenitor cell | wk13 | CDH11 | 1009 | 1750 | 0.85 | 0.44 | 0.07 | 2.05082158828258e-12 | 6.91003825955932e-08 |
73 | 6 | IPC | Interstitial progenitor cell | wk13 | SYT1 | 6857 | 11509 | 0.85 | 0.36 | 0.05 | 6.62175755540144e-12 | 2.23113499071696e-07 |