Marker Genes
Dataset: Single-cell transcriptomics reveals gene expression dynamics of human fetal kidney development
- tissue: Kidney
- ontology: Kidney
- genotype: -
- stage: Fetal
- treatment condition: WT
- cell/nucleus: Cells
- pmid: 30789893
- subset name: wk13
- total genes: Not reported
- clustering: scran
- pseudotime: Monocle 2
- link: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE114530
Rows:100
dataset id | cluster id | cluster name | cell type name | sample id | gene symbol | entrez geneid | species specific geneid |
avg log fc (?)
|
pct 1 | pct 2 | p value | padj |
---|---|---|---|---|---|---|---|---|---|---|---|---|
73 | 5 | ICb | Interstitial cells b | wk13 | SULT1E1 | 6783 | 11377 | 3.26 | 1 | 0.05 | 3.14324190133765e-71 | 1.05908392623671e-66 |
73 | 5 | ICb | Interstitial cells b | wk13 | CLDN11 | 5010 | 8514 | 3.16 | 0.66 | 0.03 | 2.70798464333025e-42 | 9.12428345723693e-38 |
73 | 5 | ICb | Interstitial cells b | wk13 | LGALS1 | 3956 | 6561 | 2.71 | 1 | 0.06 | 1.73600597997009e-60 | 5.84929854891124e-56 |
73 | 5 | ICb | Interstitial cells b | wk13 | COL1A1 | 1277 | 2197 | 2.6 | 1 | 0.08 | 1.20193370849131e-49 | 4.04979543739063e-45 |
73 | 5 | ICb | Interstitial cells b | wk13 | COL1A2 | 1278 | 2198 | 2.29 | 1 | 0.07 | 3.54310962827663e-50 | 1.19381535815153e-45 |
73 | 5 | ICb | Interstitial cells b | wk13 | MFAP4 | 4239 | 7035 | 2.26 | 0.88 | 0.04 | 5.21482951065969e-70 | 1.75708465532168e-65 |
73 | 5 | ICb | Interstitial cells b | wk13 | COL3A1 | 1281 | 2201 | 2.25 | 1 | 0.28 | 1.80498676889249e-19 | 6.08172241910636e-15 |
73 | 5 | ICb | Interstitial cells b | wk13 | ACTA2 | 59 | 130 | 2.2 | 0.55 | 0.02 | 9.38066050002647e-46 | 3.16071974887892e-41 |
73 | 5 | ICb | Interstitial cells b | wk13 | PTN | 5764 | 9630 | 2.13 | 0.77 | 0.19 | 2.84284511642168e-13 | 9.57868233527122e-09 |
73 | 5 | ICb | Interstitial cells b | wk13 | TNC | 3371 | 5318 | 2.07 | 0.83 | 0.01 | 6.71335728100156e-150 | 2.26199860226067e-145 |
73 | 5 | ICb | Interstitial cells b | wk13 | CTSC | 1075 | 2528 | 2.06 | 0.83 | 0.15 | 1.38187808225071e-19 | 4.65610001033553e-15 |
73 | 5 | ICb | Interstitial cells b | wk13 | PCOLCE | 5118 | 8738 | 2 | 0.83 | 0.03 | 2.72267856802794e-75 | 9.17379316711335e-71 |
73 | 5 | ICb | Interstitial cells b | wk13 | PRSS23 | 11098 | 14370 | 1.98 | 0.83 | 0.04 | 3.74754525074521e-63 | 1.26269789678609e-58 |
73 | 5 | ICb | Interstitial cells b | wk13 | TAGLN | 6876 | 11553 | 1.97 | 0.44 | 0.05 | 1.96257406270802e-13 | 6.61269704688839e-09 |
73 | 5 | ICb | Interstitial cells b | wk13 | MOXD1 | 26002 | 21063 | 1.97 | 0.72 | 0.02 | 8.29475777221169e-83 | 2.79483568376901e-78 |
73 | 5 | ICb | Interstitial cells b | wk13 | IGF2 | 3481 | 5466 | 1.93 | 1 | 0.28 | 1.60544446845874e-17 | 5.40938459202488e-13 |
73 | 5 | ICb | Interstitial cells b | wk13 | MEG3 | 55384 | 14575 | 1.88 | 0.66 | 0.06 | 3.65886143366482e-26 | 1.23281677145902e-21 |
73 | 5 | ICb | Interstitial cells b | wk13 | TPM2 | 7169 | 12011 | 1.86 | 0.83 | 0.13 | 5.5774776078917e-21 | 1.87927530520303e-16 |
73 | 5 | ICb | Interstitial cells b | wk13 | OLFML3 | 56944 | 24956 | 1.75 | 0.77 | 0.02 | 4.35627725941846e-76 | 1.46780405978845e-71 |
73 | 5 | ICb | Interstitial cells b | wk13 | PCDH18 | 54510 | 14268 | 1.74 | 0.72 | 0.03 | 1.15491655068678e-54 | 3.89137582588403e-50 |
73 | 5 | ICb | Interstitial cells b | wk13 | DCN | 1634 | 2705 | 1.66 | 0.55 | 0.04 | 3.58010612699899e-26 | 1.20628095843104e-21 |
73 | 5 | ICb | Interstitial cells b | wk13 | PDGFRA | 5156 | 8803 | 1.64 | 0.5 | 0.01 | 3.57739235719936e-74 | 1.20536658083475e-69 |
73 | 5 | ICb | Interstitial cells b | wk13 | EMILIN1 | 11117 | 19880 | 1.64 | 0.72 | 0.06 | 2.20295830191908e-30 | 7.42264770248614e-26 |
73 | 5 | ICb | Interstitial cells b | wk13 | AGTR2 | 186 | 338 | 1.62 | 0.55 | 0.01 | 1.21686447861827e-93 | 4.10010317425641e-89 |
73 | 5 | ICb | Interstitial cells b | wk13 | PLAT | 5327 | 9051 | 1.61 | 0.83 | 0.07 | 3.91864642402252e-35 | 1.32034872611015e-30 |
73 | 5 | ICb | Interstitial cells b | wk13 | ALX1 | 8092 | 1494 | 1.59 | 0.66 | 0.008 | 8.89449801985093e-148 | 2.99691216280857e-143 |
73 | 5 | ICb | Interstitial cells b | wk13 | COL6A3 | 1293 | 2213 | 1.57 | 0.61 | 0.02 | 1.50109032248487e-61 | 5.05777373258051e-57 |
73 | 5 | ICb | Interstitial cells b | wk13 | SNAI2 | 6591 | 11094 | 1.54 | 0.44 | 0.03 | 2.20974170541476e-19 | 7.44550370222448e-15 |
73 | 5 | ICb | Interstitial cells b | wk13 | TGFBI | 7045 | 11771 | 1.48 | 0.61 | 0.01 | 3.86944876978199e-75 | 1.30377206849034e-70 |
73 | 5 | ICb | Interstitial cells b | wk13 | B2M | 567 | 914 | 1.44 | 1 | 0.56 | 1.1925469710375e-11 | 4.01816776421376e-07 |
73 | 5 | ICb | Interstitial cells b | wk13 | AKAP12 | 9590 | 370 | 1.43 | 0.94 | 0.24 | 3.04577170493728e-16 | 1.02624231826157e-11 |
73 | 5 | ICb | Interstitial cells b | wk13 | NR2F2-AS1 | 644192 | 44222 | 1.42 | 0.66 | 0.07 | 2.01888020559397e-23 | 6.80241496472833e-19 |
73 | 5 | ICb | Interstitial cells b | wk13 | MARCKS | 4082 | 6759 | 1.42 | 0.94 | 0.44 | 3.43204327601336e-09 | 0.000115639266141994 |
73 | 5 | ICb | Interstitial cells b | wk13 | GPM6B | 2824 | 4461 | 1.38 | 0.44 | 0.1 | 3.47538607136273e-07 | 0.01 |
73 | 5 | ICb | Interstitial cells b | wk13 | C7 | 730 | 1346 | 1.37 | 0.44 | 0.007 | 1.24093621656568e-87 | 4.18121048809642e-83 |
73 | 5 | ICb | Interstitial cells b | wk13 | ALDH1A2 | 8854 | 15472 | 1.34 | 0.61 | 0.21 | 1.01428497283441e-06 | 0.03 |
73 | 5 | ICb | Interstitial cells b | wk13 | MMP2 | 4313 | 7166 | 1.34 | 0.61 | 0.02 | 6.9676433362821e-47 | 2.34767774572689e-42 |
73 | 5 | ICb | Interstitial cells b | wk13 | LUM | 4060 | 6724 | 1.33 | 0.33 | 0.004 | 1.56169760862039e-74 | 5.26198392248554e-70 |
73 | 5 | ICb | Interstitial cells b | wk13 | COL6A1 | 1291 | 2211 | 1.33 | 0.77 | 0.2 | 1.6692619931576e-12 | 5.62441135974522e-08 |
73 | 5 | ICb | Interstitial cells b | wk13 | FN1 | 2335 | 3778 | 1.32 | 0.5 | 0.06 | 1.49522991919851e-15 | 5.03802768974746e-11 |
73 | 5 | ICb | Interstitial cells b | wk13 | LINC00924 | 145820 | 27081 | 1.31 | 0.44 | 0.003 | 5.71784007946949e-139 | 1.92656903637645e-134 |
73 | 5 | ICb | Interstitial cells b | wk13 | CALD1 | 800 | 1441 | 1.3 | 0.88 | 0.41 | 2.67087776259902e-09 | 8.99925553330112e-05 |
73 | 5 | ICb | Interstitial cells b | wk13 | FAM162B | 221303 | 21549 | 1.3 | 0.27 | 0.005 | 4.07659297120641e-45 | 1.37356723571829e-40 |
73 | 5 | ICb | Interstitial cells b | wk13 | CDH11 | 1009 | 1750 | 1.27 | 0.66 | 0.07 | 1.24996439670764e-22 | 4.21163003826671e-18 |
73 | 5 | ICb | Interstitial cells b | wk13 | EPB41L2 | 2037 | 3379 | 1.21 | 0.44 | 0.05 | 4.15487890857757e-14 | 1.39994489945613e-09 |
73 | 5 | ICb | Interstitial cells b | wk13 | COL6A2 | 1292 | 2212 | 1.21 | 0.55 | 0.03 | 2.27669356055214e-37 | 7.6710912829244e-33 |
73 | 5 | ICb | Interstitial cells b | wk13 | LDB2 | 9079 | 6533 | 1.21 | 0.44 | 0.02 | 1.79531373406244e-27 | 6.04913009555e-23 |
73 | 5 | ICb | Interstitial cells b | wk13 | IGFBP5 | 3488 | 5474 | 1.2 | 0.44 | 0.02 | 3.87873316509482e-26 | 1.30690035264705e-21 |
73 | 5 | ICb | Interstitial cells b | wk13 | ISLR | 3671 | 6133 | 1.2 | 0.5 | 0.03 | 2.16586690093234e-25 | 7.29767193600143e-21 |
73 | 5 | ICb | Interstitial cells b | wk13 | FLRT2 | 23768 | 3761 | 1.2 | 0.44 | 0.05 | 7.21732643221347e-15 | 2.43180596807001e-10 |
73 | 5 | ICb | Interstitial cells b | wk13 | CYTL1 | 54360 | 24435 | 1.19 | 0.5 | 0.02 | 2.3730512286128e-34 | 7.99575880968797e-30 |
73 | 5 | ICb | Interstitial cells b | wk13 | FBLN5 | 10516 | 3602 | 1.17 | 0.5 | 0.02 | 9.58795533613609e-35 | 3.2305656709577e-30 |
73 | 5 | ICb | Interstitial cells b | wk13 | THY1 | 7070 | 11801 | 1.15 | 0.44 | 0.03 | 9.07033382604248e-22 | 3.05615827934675e-17 |
73 | 5 | ICb | Interstitial cells b | wk13 | CAVIN1 | 284119 | 9688 | 1.15 | 0.44 | 0.01 | 3.35434064563537e-43 | 1.13021153714038e-38 |
73 | 5 | ICb | Interstitial cells b | wk13 | AGTR1 | 185 | 336 | 1.15 | 0.38 | 0.008 | 3.07888003493364e-61 | 1.03739783897054e-56 |
73 | 5 | ICb | Interstitial cells b | wk13 | COL4A1 | 1282 | 2202 | 1.13 | 0.77 | 0.24 | 3.6449276748341e-10 | 1.2281219307586e-05 |
73 | 5 | ICb | Interstitial cells b | wk13 | ZEB2 | 9839 | 14881 | 1.11 | 0.5 | 0.11 | 1.43728878852192e-08 | 0.000484280084404575 |
73 | 5 | ICb | Interstitial cells b | wk13 | MEIS1 | 4211 | 7000 | 1.1 | 0.44 | 0.07 | 1.31079029748904e-09 | 4.41657682835958e-05 |
73 | 5 | ICb | Interstitial cells b | wk13 | CPE | 1363 | 2303 | 1.1 | 0.44 | 0.11 | 1.24830157056464e-06 | 0.04 |
73 | 5 | ICb | Interstitial cells b | wk13 | TGFB1I1 | 7041 | 11767 | 1.1 | 0.44 | 0.06 | 5.87986311025414e-11 | 1.98116107636903e-06 |
73 | 5 | ICb | Interstitial cells b | wk13 | ACTG2 | 72 | 145 | 1.09 | 0.11 | 0 | 4.21063349636767e-56 | 1.41873085026612e-51 |
73 | 5 | ICb | Interstitial cells b | wk13 | COL21A1 | 81578 | 17025 | 1.08 | 0.38 | 0.009 | 8.13823605772348e-56 | 2.74209725728935e-51 |
73 | 5 | ICb | Interstitial cells b | wk13 | COL5A2 | 1290 | 2210 | 1.08 | 0.38 | 0.03 | 8.24105393561182e-16 | 2.77674071306505e-11 |
73 | 5 | ICb | Interstitial cells b | wk13 | RBP1 | 5947 | 9919 | 1.05 | 0.83 | 0.28 | 3.36429215631938e-09 | 0.000113356459915025 |
73 | 5 | ICb | Interstitial cells b | wk13 | TMEFF2 | 23671 | 11867 | 1.04 | 0.33 | 0.008 | 1.08149997050382e-46 | 3.64400600061556e-42 |
73 | 5 | ICb | Interstitial cells b | wk13 | KLHL13 | 90293 | 22931 | 1.04 | 0.5 | 0.1 | 3.22521559083794e-09 | 0.000108670414117694 |
73 | 5 | ICb | Interstitial cells b | wk13 | MRC2 | 9902 | 16875 | 1.02 | 0.61 | 0.11 | 9.60629170445765e-12 | 3.23674392689996e-07 |
73 | 5 | ICb | Interstitial cells b | wk13 | GATA2 | 2624 | 4171 | 1.02 | 0.33 | 0.01 | 8.42294488720294e-32 | 2.83802705029416e-27 |
73 | 5 | ICb | Interstitial cells b | wk13 | CHODL | 140578 | 17807 | 1.01 | 0.33 | 0.007 | 4.44639020673572e-53 | 1.49816671625753e-48 |
73 | 5 | ICb | Interstitial cells b | wk13 | CCND2 | 894 | 1583 | 1 | 0.66 | 0.15 | 5.93798496067771e-11 | 2.00074465265075e-06 |
73 | 5 | ICb | Interstitial cells b | wk13 | ENPP1 | 5167 | 3356 | 0.99 | 0.27 | 0.03 | 1.82421150312202e-09 | 6.14649823861933e-05 |
73 | 5 | ICb | Interstitial cells b | wk13 | S1PR3 | 1903 | 3167 | 0.99 | 0.33 | 0.01 | 2.15986504367331e-29 | 7.27744927815286e-25 |
73 | 5 | ICb | Interstitial cells b | wk13 | FBLN1 | 2192 | 3600 | 0.99 | 0.61 | 0.17 | 4.45588707532652e-08 | 0.00150136659116052 |
73 | 5 | ICb | Interstitial cells b | wk13 | LPAR6 | 10161 | 15520 | 0.98 | 0.5 | 0.06 | 2.70362563235262e-14 | 9.10959620564893e-10 |
73 | 5 | ICb | Interstitial cells b | wk13 | CYP1B1 | 1545 | 2597 | 0.98 | 0.44 | 0.09 | 1.52277889635523e-07 | 0.00513085121337933 |
73 | 5 | ICb | Interstitial cells b | wk13 | TPM1 | 7168 | 12010 | 0.98 | 0.94 | 0.45 | 1.84514728539646e-07 | 0.00621703926341485 |
73 | 5 | ICb | Interstitial cells b | wk13 | CTSK | 1513 | 2536 | 0.97 | 0.27 | 0.008 | 1.13009148118304e-33 | 3.80773023669812e-29 |
73 | 5 | ICb | Interstitial cells b | wk13 | PLAC9 | 219348 | 19255 | 0.96 | 0.38 | 0.007 | 3.22006150264299e-63 | 1.08496752270053e-58 |
73 | 5 | ICb | Interstitial cells b | wk13 | CYBRD1 | 79901 | 20797 | 0.96 | 0.27 | 0.008 | 1.39494611220397e-31 | 4.70013143046007e-27 |
73 | 5 | ICb | Interstitial cells b | wk13 | NRP1 | 8829 | 8004 | 0.96 | 0.44 | 0.09 | 2.32483579693916e-08 | 0.00078333017342068 |
73 | 5 | ICb | Interstitial cells b | wk13 | EMCN | 51705 | 16041 | 0.95 | 0.22 | 0.01 | 5.92821268991118e-11 | 1.99745198373867e-06 |
73 | 5 | ICb | Interstitial cells b | wk13 | COL16A1 | 1307 | 2193 | 0.95 | 0.33 | 0.004 | 2.03858432604432e-74 | 6.86880602817375e-70 |
73 | 5 | ICb | Interstitial cells b | wk13 | TFPI | 7035 | 11760 | 0.95 | 0.22 | 0.02 | 1.69427145847226e-08 | 0.000570867825217643 |
73 | 5 | ICb | Interstitial cells b | wk13 | DNM3OS | 100628315 | 41228 | 0.95 | 0.33 | 0.01 | 3.06825767416801e-37 | 1.03381874073417e-32 |
73 | 5 | ICb | Interstitial cells b | wk13 | LEF1 | 51176 | 6551 | 0.93 | 0.38 | 0.03 | 7.82115900313171e-15 | 2.6352613145152e-10 |
73 | 5 | ICb | Interstitial cells b | wk13 | CPED1 | 79974 | 26159 | 0.93 | 0.27 | 0.01 | 1.0365354856323e-26 | 3.49250266528946e-22 |
73 | 5 | ICb | Interstitial cells b | wk13 | TBX2 | 6909 | 11597 | 0.92 | 0.33 | 0.03 | 2.15508323295027e-11 | 7.26133744510262e-07 |
73 | 5 | ICb | Interstitial cells b | wk13 | ITM2A | 9452 | 6173 | 0.92 | 0.22 | 0.02 | 1.74896258948824e-08 | 0.000589295454902167 |
73 | 5 | ICb | Interstitial cells b | wk13 | MDK | 4192 | 6972 | 0.91 | 1 | 0.68 | 1.97428373551859e-08 | 0.000665215161845633 |
73 | 5 | ICb | Interstitial cells b | wk13 | CCDC80 | 151887 | 30649 | 0.91 | 0.5 | 0.12 | 1.50494017685514e-07 | 0.0050707454318957 |
73 | 5 | ICb | Interstitial cells b | wk13 | FBN2 | 2201 | 3604 | 0.91 | 0.38 | 0.04 | 3.84742549426977e-14 | 1.29635154603926e-09 |
73 | 5 | ICb | Interstitial cells b | wk13 | EDNRB | 1910 | 3180 | 0.91 | 0.33 | 0.01 | 5.00899766322582e-25 | 1.68773167264731e-20 |
73 | 5 | ICb | Interstitial cells b | wk13 | KCNJ8 | 3764 | 6269 | 0.9 | 0.38 | 0.02 | 4.37222680514235e-23 | 1.47317809972466e-18 |
73 | 5 | ICb | Interstitial cells b | wk13 | MYO9A | 4649 | 7608 | 0.89 | 0.55 | 0.11 | 2.16287785199543e-10 | 7.2876006345134e-06 |
73 | 5 | ICb | Interstitial cells b | wk13 | BCAT1 | 586 | 976 | 0.88 | 0.38 | 0.02 | 1.60127236433711e-24 | 5.39532710439747e-20 |
73 | 5 | ICb | Interstitial cells b | wk13 | OSTN | 344901 | 29961 | 0.88 | 0.11 | 0.001 | 2.72562961077629e-42 | 9.18373641054965e-38 |
73 | 5 | ICb | Interstitial cells b | wk13 | NFIA | 4774 | 7784 | 0.87 | 0.27 | 0.03 | 3.00193171720216e-09 | 0.00010114708727941 |
73 | 5 | ICb | Interstitial cells b | wk13 | MMP11 | 4320 | 7157 | 0.87 | 0.33 | 0.04 | 9.75940107443406e-11 | 3.28833259801981e-06 |
73 | 5 | ICb | Interstitial cells b | wk13 | APCDD1 | 147495 | 15718 | 0.86 | 0.22 | 0.005 | 7.4711455047331e-32 | 2.51732776636477e-27 |
73 | 5 | ICb | Interstitial cells b | wk13 | PLEKHA4 | 57664 | 14339 | 0.85 | 0.38 | 0.05 | 3.43587573026387e-11 | 1.15768396855511e-06 |