Marker Genes
Dataset: Single-cell transcriptomics reveals gene expression dynamics of human fetal kidney development
- tissue: Kidney
- ontology: Kidney
- genotype: -
- stage: Fetal
- treatment condition: WT
- cell/nucleus: Cells
- pmid: 30789893
- subset name: wk13
- total genes: Not reported
- clustering: scran
- pseudotime: Monocle 2
- link: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE114530
Rows:100
| dataset id | cluster id | cluster name | cell type name | sample id | gene symbol | entrez geneid | species specific geneid |
avg log fc (?)
|
pct 1 | pct 2 | p value | padj |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 73 | 5 | ICb | Interstitial cells b | wk13 | SULT1E1 | 6783 | 11377 | 3.26 | 1 | 0.05 | 3.1432419013377E-71 | 1.0590839262367E-66 |
| 73 | 5 | ICb | Interstitial cells b | wk13 | CLDN11 | 5010 | 8514 | 3.16 | 0.66 | 0.03 | 2.7079846433302E-42 | 9.1242834572369E-38 |
| 73 | 5 | ICb | Interstitial cells b | wk13 | LGALS1 | 3956 | 6561 | 2.71 | 1 | 0.06 | 1.7360059799701E-60 | 5.8492985489112E-56 |
| 73 | 5 | ICb | Interstitial cells b | wk13 | COL1A1 | 1277 | 2197 | 2.6 | 1 | 0.08 | 1.2019337084913E-49 | 4.0497954373906E-45 |
| 73 | 5 | ICb | Interstitial cells b | wk13 | COL1A2 | 1278 | 2198 | 2.29 | 1 | 0.07 | 3.5431096282766E-50 | 1.1938153581515E-45 |
| 73 | 5 | ICb | Interstitial cells b | wk13 | MFAP4 | 4239 | 7035 | 2.26 | 0.88 | 0.04 | 5.2148295106597E-70 | 1.7570846553217E-65 |
| 73 | 5 | ICb | Interstitial cells b | wk13 | COL3A1 | 1281 | 2201 | 2.25 | 1 | 0.28 | 1.8049867688925E-19 | 6.0817224191064E-15 |
| 73 | 5 | ICb | Interstitial cells b | wk13 | ACTA2 | 59 | 130 | 2.2 | 0.55 | 0.02 | 9.3806605000265E-46 | 3.1607197488789E-41 |
| 73 | 5 | ICb | Interstitial cells b | wk13 | PTN | 5764 | 9630 | 2.13 | 0.77 | 0.19 | 2.8428451164217E-13 | 9.5786823352712E-9 |
| 73 | 5 | ICb | Interstitial cells b | wk13 | TNC | 3371 | 5318 | 2.07 | 0.83 | 0.01 | 6.7133572810016E-150 | 2.2619986022607E-145 |
| 73 | 5 | ICb | Interstitial cells b | wk13 | CTSC | 1075 | 2528 | 2.06 | 0.83 | 0.15 | 1.3818780822507E-19 | 4.6561000103355E-15 |
| 73 | 5 | ICb | Interstitial cells b | wk13 | PCOLCE | 5118 | 8738 | 2 | 0.83 | 0.03 | 2.7226785680279E-75 | 9.1737931671133E-71 |
| 73 | 5 | ICb | Interstitial cells b | wk13 | PRSS23 | 11098 | 14370 | 1.98 | 0.83 | 0.04 | 3.7475452507452E-63 | 1.2626978967861E-58 |
| 73 | 5 | ICb | Interstitial cells b | wk13 | TAGLN | 6876 | 11553 | 1.97 | 0.44 | 0.05 | 1.962574062708E-13 | 6.6126970468884E-9 |
| 73 | 5 | ICb | Interstitial cells b | wk13 | MOXD1 | 26002 | 21063 | 1.97 | 0.72 | 0.02 | 8.2947577722117E-83 | 2.794835683769E-78 |
| 73 | 5 | ICb | Interstitial cells b | wk13 | IGF2 | 3481 | 5466 | 1.93 | 1 | 0.28 | 1.6054444684587E-17 | 5.4093845920249E-13 |
| 73 | 5 | ICb | Interstitial cells b | wk13 | MEG3 | 55384 | 14575 | 1.88 | 0.66 | 0.06 | 3.6588614336648E-26 | 1.232816771459E-21 |
| 73 | 5 | ICb | Interstitial cells b | wk13 | TPM2 | 7169 | 12011 | 1.86 | 0.83 | 0.13 | 5.5774776078917E-21 | 1.879275305203E-16 |
| 73 | 5 | ICb | Interstitial cells b | wk13 | OLFML3 | 56944 | 24956 | 1.75 | 0.77 | 0.02 | 4.3562772594185E-76 | 1.4678040597884E-71 |
| 73 | 5 | ICb | Interstitial cells b | wk13 | PCDH18 | 54510 | 14268 | 1.74 | 0.72 | 0.03 | 1.1549165506868E-54 | 3.891375825884E-50 |
| 73 | 5 | ICb | Interstitial cells b | wk13 | DCN | 1634 | 2705 | 1.66 | 0.55 | 0.04 | 3.580106126999E-26 | 1.206280958431E-21 |
| 73 | 5 | ICb | Interstitial cells b | wk13 | PDGFRA | 5156 | 8803 | 1.64 | 0.5 | 0.01 | 3.5773923571994E-74 | 1.2053665808348E-69 |
| 73 | 5 | ICb | Interstitial cells b | wk13 | EMILIN1 | 11117 | 19880 | 1.64 | 0.72 | 0.06 | 2.2029583019191E-30 | 7.4226477024861E-26 |
| 73 | 5 | ICb | Interstitial cells b | wk13 | AGTR2 | 186 | 338 | 1.62 | 0.55 | 0.01 | 1.2168644786183E-93 | 4.1001031742564E-89 |
| 73 | 5 | ICb | Interstitial cells b | wk13 | PLAT | 5327 | 9051 | 1.61 | 0.83 | 0.07 | 3.9186464240225E-35 | 1.3203487261102E-30 |
| 73 | 5 | ICb | Interstitial cells b | wk13 | ALX1 | 8092 | 1494 | 1.59 | 0.66 | 0.008 | 8.8944980198509E-148 | 2.9969121628086E-143 |
| 73 | 5 | ICb | Interstitial cells b | wk13 | COL6A3 | 1293 | 2213 | 1.57 | 0.61 | 0.02 | 1.5010903224849E-61 | 5.0577737325805E-57 |
| 73 | 5 | ICb | Interstitial cells b | wk13 | SNAI2 | 6591 | 11094 | 1.54 | 0.44 | 0.03 | 2.2097417054148E-19 | 7.4455037022245E-15 |
| 73 | 5 | ICb | Interstitial cells b | wk13 | TGFBI | 7045 | 11771 | 1.48 | 0.61 | 0.01 | 3.869448769782E-75 | 1.3037720684903E-70 |
| 73 | 5 | ICb | Interstitial cells b | wk13 | B2M | 567 | 914 | 1.44 | 1 | 0.56 | 1.1925469710375E-11 | 4.0181677642138E-7 |
| 73 | 5 | ICb | Interstitial cells b | wk13 | AKAP12 | 9590 | 370 | 1.43 | 0.94 | 0.24 | 3.0457717049373E-16 | 1.0262423182616E-11 |
| 73 | 5 | ICb | Interstitial cells b | wk13 | NR2F2-AS1 | 644192 | 44222 | 1.42 | 0.66 | 0.07 | 2.018880205594E-23 | 6.8024149647283E-19 |
| 73 | 5 | ICb | Interstitial cells b | wk13 | MARCKS | 4082 | 6759 | 1.42 | 0.94 | 0.44 | 3.4320432760134E-9 | 0.00011563926614199 |
| 73 | 5 | ICb | Interstitial cells b | wk13 | GPM6B | 2824 | 4461 | 1.38 | 0.44 | 0.1 | 3.4753860713627E-7 | 0.01 |
| 73 | 5 | ICb | Interstitial cells b | wk13 | C7 | 730 | 1346 | 1.37 | 0.44 | 0.007 | 1.2409362165657E-87 | 4.1812104880964E-83 |
| 73 | 5 | ICb | Interstitial cells b | wk13 | ALDH1A2 | 8854 | 15472 | 1.34 | 0.61 | 0.21 | 1.0142849728344E-6 | 0.03 |
| 73 | 5 | ICb | Interstitial cells b | wk13 | MMP2 | 4313 | 7166 | 1.34 | 0.61 | 0.02 | 6.9676433362821E-47 | 2.3476777457269E-42 |
| 73 | 5 | ICb | Interstitial cells b | wk13 | LUM | 4060 | 6724 | 1.33 | 0.33 | 0.004 | 1.5616976086204E-74 | 5.2619839224855E-70 |
| 73 | 5 | ICb | Interstitial cells b | wk13 | COL6A1 | 1291 | 2211 | 1.33 | 0.77 | 0.2 | 1.6692619931576E-12 | 5.6244113597452E-8 |
| 73 | 5 | ICb | Interstitial cells b | wk13 | FN1 | 2335 | 3778 | 1.32 | 0.5 | 0.06 | 1.4952299191985E-15 | 5.0380276897475E-11 |
| 73 | 5 | ICb | Interstitial cells b | wk13 | LINC00924 | 145820 | 27081 | 1.31 | 0.44 | 0.003 | 5.7178400794695E-139 | 1.9265690363765E-134 |
| 73 | 5 | ICb | Interstitial cells b | wk13 | CALD1 | 800 | 1441 | 1.3 | 0.88 | 0.41 | 2.670877762599E-9 | 8.9992555333011E-5 |
| 73 | 5 | ICb | Interstitial cells b | wk13 | FAM162B | 221303 | 21549 | 1.3 | 0.27 | 0.005 | 4.0765929712064E-45 | 1.3735672357183E-40 |
| 73 | 5 | ICb | Interstitial cells b | wk13 | CDH11 | 1009 | 1750 | 1.27 | 0.66 | 0.07 | 1.2499643967076E-22 | 4.2116300382667E-18 |
| 73 | 5 | ICb | Interstitial cells b | wk13 | EPB41L2 | 2037 | 3379 | 1.21 | 0.44 | 0.05 | 4.1548789085776E-14 | 1.3999448994561E-9 |
| 73 | 5 | ICb | Interstitial cells b | wk13 | COL6A2 | 1292 | 2212 | 1.21 | 0.55 | 0.03 | 2.2766935605521E-37 | 7.6710912829244E-33 |
| 73 | 5 | ICb | Interstitial cells b | wk13 | LDB2 | 9079 | 6533 | 1.21 | 0.44 | 0.02 | 1.7953137340624E-27 | 6.04913009555E-23 |
| 73 | 5 | ICb | Interstitial cells b | wk13 | IGFBP5 | 3488 | 5474 | 1.2 | 0.44 | 0.02 | 3.8787331650948E-26 | 1.306900352647E-21 |
| 73 | 5 | ICb | Interstitial cells b | wk13 | ISLR | 3671 | 6133 | 1.2 | 0.5 | 0.03 | 2.1658669009323E-25 | 7.2976719360014E-21 |
| 73 | 5 | ICb | Interstitial cells b | wk13 | FLRT2 | 23768 | 3761 | 1.2 | 0.44 | 0.05 | 7.2173264322135E-15 | 2.43180596807E-10 |
| 73 | 5 | ICb | Interstitial cells b | wk13 | CYTL1 | 54360 | 24435 | 1.19 | 0.5 | 0.02 | 2.3730512286128E-34 | 7.995758809688E-30 |
| 73 | 5 | ICb | Interstitial cells b | wk13 | FBLN5 | 10516 | 3602 | 1.17 | 0.5 | 0.02 | 9.5879553361361E-35 | 3.2305656709577E-30 |
| 73 | 5 | ICb | Interstitial cells b | wk13 | THY1 | 7070 | 11801 | 1.15 | 0.44 | 0.03 | 9.0703338260425E-22 | 3.0561582793468E-17 |
| 73 | 5 | ICb | Interstitial cells b | wk13 | CAVIN1 | 284119 | 9688 | 1.15 | 0.44 | 0.01 | 3.3543406456354E-43 | 1.1302115371404E-38 |
| 73 | 5 | ICb | Interstitial cells b | wk13 | AGTR1 | 185 | 336 | 1.15 | 0.38 | 0.008 | 3.0788800349336E-61 | 1.0373978389705E-56 |
| 73 | 5 | ICb | Interstitial cells b | wk13 | COL4A1 | 1282 | 2202 | 1.13 | 0.77 | 0.24 | 3.6449276748341E-10 | 1.2281219307586E-5 |
| 73 | 5 | ICb | Interstitial cells b | wk13 | ZEB2 | 9839 | 14881 | 1.11 | 0.5 | 0.11 | 1.4372887885219E-8 | 0.00048428008440457 |
| 73 | 5 | ICb | Interstitial cells b | wk13 | MEIS1 | 4211 | 7000 | 1.1 | 0.44 | 0.07 | 1.310790297489E-9 | 4.4165768283596E-5 |
| 73 | 5 | ICb | Interstitial cells b | wk13 | CPE | 1363 | 2303 | 1.1 | 0.44 | 0.11 | 1.2483015705646E-6 | 0.04 |
| 73 | 5 | ICb | Interstitial cells b | wk13 | TGFB1I1 | 7041 | 11767 | 1.1 | 0.44 | 0.06 | 5.8798631102541E-11 | 1.981161076369E-6 |
| 73 | 5 | ICb | Interstitial cells b | wk13 | ACTG2 | 72 | 145 | 1.09 | 0.11 | 0 | 4.2106334963677E-56 | 1.4187308502661E-51 |
| 73 | 5 | ICb | Interstitial cells b | wk13 | COL21A1 | 81578 | 17025 | 1.08 | 0.38 | 0.009 | 8.1382360577235E-56 | 2.7420972572894E-51 |
| 73 | 5 | ICb | Interstitial cells b | wk13 | COL5A2 | 1290 | 2210 | 1.08 | 0.38 | 0.03 | 8.2410539356118E-16 | 2.776740713065E-11 |
| 73 | 5 | ICb | Interstitial cells b | wk13 | RBP1 | 5947 | 9919 | 1.05 | 0.83 | 0.28 | 3.3642921563194E-9 | 0.00011335645991502 |
| 73 | 5 | ICb | Interstitial cells b | wk13 | TMEFF2 | 23671 | 11867 | 1.04 | 0.33 | 0.008 | 1.0814999705038E-46 | 3.6440060006156E-42 |
| 73 | 5 | ICb | Interstitial cells b | wk13 | KLHL13 | 90293 | 22931 | 1.04 | 0.5 | 0.1 | 3.2252155908379E-9 | 0.00010867041411769 |
| 73 | 5 | ICb | Interstitial cells b | wk13 | MRC2 | 9902 | 16875 | 1.02 | 0.61 | 0.11 | 9.6062917044577E-12 | 3.2367439269E-7 |
| 73 | 5 | ICb | Interstitial cells b | wk13 | GATA2 | 2624 | 4171 | 1.02 | 0.33 | 0.01 | 8.4229448872029E-32 | 2.8380270502942E-27 |
| 73 | 5 | ICb | Interstitial cells b | wk13 | CHODL | 140578 | 17807 | 1.01 | 0.33 | 0.007 | 4.4463902067357E-53 | 1.4981667162575E-48 |
| 73 | 5 | ICb | Interstitial cells b | wk13 | CCND2 | 894 | 1583 | 1 | 0.66 | 0.15 | 5.9379849606777E-11 | 2.0007446526507E-6 |
| 73 | 5 | ICb | Interstitial cells b | wk13 | ENPP1 | 5167 | 3356 | 0.99 | 0.27 | 0.03 | 1.824211503122E-9 | 6.1464982386193E-5 |
| 73 | 5 | ICb | Interstitial cells b | wk13 | S1PR3 | 1903 | 3167 | 0.99 | 0.33 | 0.01 | 2.1598650436733E-29 | 7.2774492781529E-25 |
| 73 | 5 | ICb | Interstitial cells b | wk13 | FBLN1 | 2192 | 3600 | 0.99 | 0.61 | 0.17 | 4.4558870753265E-8 | 0.0015013665911605 |
| 73 | 5 | ICb | Interstitial cells b | wk13 | LPAR6 | 10161 | 15520 | 0.98 | 0.5 | 0.06 | 2.7036256323526E-14 | 9.1095962056489E-10 |
| 73 | 5 | ICb | Interstitial cells b | wk13 | CYP1B1 | 1545 | 2597 | 0.98 | 0.44 | 0.09 | 1.5227788963552E-7 | 0.0051308512133793 |
| 73 | 5 | ICb | Interstitial cells b | wk13 | TPM1 | 7168 | 12010 | 0.98 | 0.94 | 0.45 | 1.8451472853965E-7 | 0.0062170392634149 |
| 73 | 5 | ICb | Interstitial cells b | wk13 | CTSK | 1513 | 2536 | 0.97 | 0.27 | 0.008 | 1.130091481183E-33 | 3.8077302366981E-29 |
| 73 | 5 | ICb | Interstitial cells b | wk13 | PLAC9 | 219348 | 19255 | 0.96 | 0.38 | 0.007 | 3.220061502643E-63 | 1.0849675227005E-58 |
| 73 | 5 | ICb | Interstitial cells b | wk13 | CYBRD1 | 79901 | 20797 | 0.96 | 0.27 | 0.008 | 1.394946112204E-31 | 4.7001314304601E-27 |
| 73 | 5 | ICb | Interstitial cells b | wk13 | NRP1 | 8829 | 8004 | 0.96 | 0.44 | 0.09 | 2.3248357969392E-8 | 0.00078333017342068 |
| 73 | 5 | ICb | Interstitial cells b | wk13 | EMCN | 51705 | 16041 | 0.95 | 0.22 | 0.01 | 5.9282126899112E-11 | 1.9974519837387E-6 |
| 73 | 5 | ICb | Interstitial cells b | wk13 | COL16A1 | 1307 | 2193 | 0.95 | 0.33 | 0.004 | 2.0385843260443E-74 | 6.8688060281738E-70 |
| 73 | 5 | ICb | Interstitial cells b | wk13 | TFPI | 7035 | 11760 | 0.95 | 0.22 | 0.02 | 1.6942714584723E-8 | 0.00057086782521764 |
| 73 | 5 | ICb | Interstitial cells b | wk13 | DNM3OS | 100628315 | 41228 | 0.95 | 0.33 | 0.01 | 3.068257674168E-37 | 1.0338187407342E-32 |
| 73 | 5 | ICb | Interstitial cells b | wk13 | LEF1 | 51176 | 6551 | 0.93 | 0.38 | 0.03 | 7.8211590031317E-15 | 2.6352613145152E-10 |
| 73 | 5 | ICb | Interstitial cells b | wk13 | CPED1 | 79974 | 26159 | 0.93 | 0.27 | 0.01 | 1.0365354856323E-26 | 3.4925026652895E-22 |
| 73 | 5 | ICb | Interstitial cells b | wk13 | TBX2 | 6909 | 11597 | 0.92 | 0.33 | 0.03 | 2.1550832329503E-11 | 7.2613374451026E-7 |
| 73 | 5 | ICb | Interstitial cells b | wk13 | ITM2A | 9452 | 6173 | 0.92 | 0.22 | 0.02 | 1.7489625894882E-8 | 0.00058929545490217 |
| 73 | 5 | ICb | Interstitial cells b | wk13 | MDK | 4192 | 6972 | 0.91 | 1 | 0.68 | 1.9742837355186E-8 | 0.00066521516184563 |
| 73 | 5 | ICb | Interstitial cells b | wk13 | CCDC80 | 151887 | 30649 | 0.91 | 0.5 | 0.12 | 1.5049401768551E-7 | 0.0050707454318957 |
| 73 | 5 | ICb | Interstitial cells b | wk13 | FBN2 | 2201 | 3604 | 0.91 | 0.38 | 0.04 | 3.8474254942698E-14 | 1.2963515460393E-9 |
| 73 | 5 | ICb | Interstitial cells b | wk13 | EDNRB | 1910 | 3180 | 0.91 | 0.33 | 0.01 | 5.0089976632258E-25 | 1.6877316726473E-20 |
| 73 | 5 | ICb | Interstitial cells b | wk13 | KCNJ8 | 3764 | 6269 | 0.9 | 0.38 | 0.02 | 4.3722268051423E-23 | 1.4731780997247E-18 |
| 73 | 5 | ICb | Interstitial cells b | wk13 | MYO9A | 4649 | 7608 | 0.89 | 0.55 | 0.11 | 2.1628778519954E-10 | 7.2876006345134E-6 |
| 73 | 5 | ICb | Interstitial cells b | wk13 | BCAT1 | 586 | 976 | 0.88 | 0.38 | 0.02 | 1.6012723643371E-24 | 5.3953271043975E-20 |
| 73 | 5 | ICb | Interstitial cells b | wk13 | OSTN | 344901 | 29961 | 0.88 | 0.11 | 0.001 | 2.7256296107763E-42 | 9.1837364105497E-38 |
| 73 | 5 | ICb | Interstitial cells b | wk13 | NFIA | 4774 | 7784 | 0.87 | 0.27 | 0.03 | 3.0019317172022E-9 | 0.00010114708727941 |
| 73 | 5 | ICb | Interstitial cells b | wk13 | MMP11 | 4320 | 7157 | 0.87 | 0.33 | 0.04 | 9.7594010744341E-11 | 3.2883325980198E-6 |
| 73 | 5 | ICb | Interstitial cells b | wk13 | APCDD1 | 147495 | 15718 | 0.86 | 0.22 | 0.005 | 7.4711455047331E-32 | 2.5173277663648E-27 |
| 73 | 5 | ICb | Interstitial cells b | wk13 | PLEKHA4 | 57664 | 14339 | 0.85 | 0.38 | 0.05 | 3.4358757302639E-11 | 1.1576839685551E-6 |