Marker Genes
Dataset: Single-cell transcriptomics reveals gene expression dynamics of human fetal kidney development
- tissue: Kidney
- ontology: Kidney
- genotype: -
- stage: Fetal
- treatment condition: WT
- cell/nucleus: Cells
- pmid: 30789893
- subset name: wk13
- total genes: Not reported
- clustering: scran
- pseudotime: Monocle 2
- link: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE114530
Rows:100
dataset id | cluster id | cluster name | cell type name | sample id | gene symbol | entrez geneid | species specific geneid |
avg log fc (?)
|
pct 1 | pct 2 | p value | padj |
---|---|---|---|---|---|---|---|---|---|---|---|---|
73 | 4 | ICa | Interstitial cells a | wk13 | LGALS1 | 3956 | 6561 | 2.7 | 1 | 0.05 | 2.12648724499624e-116 | 7.16498612329033e-112 |
73 | 4 | ICa | Interstitial cells a | wk13 | SULT1E1 | 6783 | 11377 | 2.51 | 0.62 | 0.05 | 2.80059243138478e-50 | 9.43631613830787e-46 |
73 | 4 | ICa | Interstitial cells a | wk13 | COL1A1 | 1277 | 2197 | 2.29 | 0.94 | 0.07 | 2.24309707533838e-82 | 7.55789128564513e-78 |
73 | 4 | ICa | Interstitial cells a | wk13 | COL1A2 | 1278 | 2198 | 2.09 | 0.91 | 0.07 | 4.86422004181988e-78 | 1.63895030089079e-73 |
73 | 4 | ICa | Interstitial cells a | wk13 | TPM2 | 7169 | 12011 | 1.86 | 0.88 | 0.13 | 8.16444162722687e-45 | 2.75092696187782e-40 |
73 | 4 | ICa | Interstitial cells a | wk13 | COL3A1 | 1281 | 2201 | 1.75 | 1 | 0.27 | 4.93401562459844e-31 | 1.6624672245522e-26 |
73 | 4 | ICa | Interstitial cells a | wk13 | PCOLCE | 5118 | 8738 | 1.7 | 0.62 | 0.03 | 1.01092901354962e-80 | 3.40622421825408e-76 |
73 | 4 | ICa | Interstitial cells a | wk13 | TAGLN | 6876 | 11553 | 1.69 | 0.54 | 0.05 | 1.9852690498841e-37 | 6.68916553667949e-33 |
73 | 4 | ICa | Interstitial cells a | wk13 | OLFML3 | 56944 | 24956 | 1.66 | 0.68 | 0.02 | 7.97984703868952e-113 | 2.68872966121605e-108 |
73 | 4 | ICa | Interstitial cells a | wk13 | EMILIN1 | 11117 | 19880 | 1.66 | 0.6 | 0.06 | 1.72230352940162e-38 | 5.80312951196582e-34 |
73 | 4 | ICa | Interstitial cells a | wk13 | MFAP4 | 4239 | 7035 | 1.62 | 0.68 | 0.04 | 2.13078846576264e-75 | 7.17947865654064e-71 |
73 | 4 | ICa | Interstitial cells a | wk13 | CLDN11 | 5010 | 8514 | 1.58 | 0.48 | 0.03 | 1.82688076400958e-40 | 6.15549204625387e-36 |
73 | 4 | ICa | Interstitial cells a | wk13 | RBP1 | 5947 | 9919 | 1.57 | 0.97 | 0.28 | 1.27395183196229e-28 | 4.29245330261374e-24 |
73 | 4 | ICa | Interstitial cells a | wk13 | CTSC | 1075 | 2528 | 1.57 | 0.74 | 0.14 | 3.01569892053196e-27 | 1.01610959428404e-22 |
73 | 4 | ICa | Interstitial cells a | wk13 | IGF2 | 3481 | 5466 | 1.56 | 0.97 | 0.27 | 1.43142839713369e-27 | 4.82305484130224e-23 |
73 | 4 | ICa | Interstitial cells a | wk13 | TGFBI | 7045 | 11771 | 1.55 | 0.62 | 0.01 | 1.45758287665436e-153 | 4.91117974459918e-149 |
73 | 4 | ICa | Interstitial cells a | wk13 | ALDH1A2 | 8854 | 15472 | 1.48 | 0.8 | 0.2 | 5.38612481184063e-23 | 1.81480089410158e-18 |
73 | 4 | ICa | Interstitial cells a | wk13 | SNAI2 | 6591 | 11094 | 1.46 | 0.45 | 0.03 | 1.05779384175092e-37 | 3.56413057039556e-33 |
73 | 4 | ICa | Interstitial cells a | wk13 | BGN | 633 | 1044 | 1.43 | 0.65 | 0.14 | 4.9402979523997e-19 | 1.66458399208156e-14 |
73 | 4 | ICa | Interstitial cells a | wk13 | FBLN5 | 10516 | 3602 | 1.43 | 0.51 | 0.02 | 4.348804123349e-70 | 1.46528606132121e-65 |
73 | 4 | ICa | Interstitial cells a | wk13 | TNC | 3371 | 5318 | 1.43 | 0.51 | 0.01 | 5.66531222084353e-108 | 1.90887029969102e-103 |
73 | 4 | ICa | Interstitial cells a | wk13 | CALD1 | 800 | 1441 | 1.41 | 0.91 | 0.41 | 3.61694639574503e-16 | 1.21869391858233e-11 |
73 | 4 | ICa | Interstitial cells a | wk13 | COL6A3 | 1293 | 2213 | 1.38 | 0.54 | 0.01 | 6.22090645777652e-92 | 2.09607222188322e-87 |
73 | 4 | ICa | Interstitial cells a | wk13 | IGFBP5 | 3488 | 5474 | 1.31 | 0.42 | 0.02 | 1.55664680720098e-45 | 5.24496575218298e-41 |
73 | 4 | ICa | Interstitial cells a | wk13 | MDFI | 4188 | 6967 | 1.3 | 0.51 | 0.02 | 1.92606667169062e-77 | 6.48968904359437e-73 |
73 | 4 | ICa | Interstitial cells a | wk13 | ACTA2 | 59 | 130 | 1.29 | 0.45 | 0.02 | 2.30821778477708e-58 | 7.77730900402789e-54 |
73 | 4 | ICa | Interstitial cells a | wk13 | B2M | 567 | 914 | 1.22 | 0.94 | 0.56 | 3.56370968255953e-15 | 1.20075634044161e-10 |
73 | 4 | ICa | Interstitial cells a | wk13 | PRSS23 | 11098 | 14370 | 1.18 | 0.45 | 0.04 | 4.75937293663792e-34 | 1.60362311727078e-29 |
73 | 4 | ICa | Interstitial cells a | wk13 | FN1 | 2335 | 3778 | 1.17 | 0.62 | 0.05 | 1.57179233345664e-45 | 5.29599708834879e-41 |
73 | 4 | ICa | Interstitial cells a | wk13 | GNG2 | 54331 | 4404 | 1.15 | 0.54 | 0.01 | 1.51470373094022e-99 | 5.10364275102999e-95 |
73 | 4 | ICa | Interstitial cells a | wk13 | MEG3 | 55384 | 14575 | 1.14 | 0.6 | 0.06 | 1.62720690851551e-36 | 5.48271095755215e-32 |
73 | 4 | ICa | Interstitial cells a | wk13 | MMP2 | 4313 | 7166 | 1.14 | 0.51 | 0.02 | 1.22260344656681e-61 | 4.11944005286222e-57 |
73 | 4 | ICa | Interstitial cells a | wk13 | PLAT | 5327 | 9051 | 1.13 | 0.62 | 0.07 | 3.50290520161091e-35 | 1.18026887863078e-30 |
73 | 4 | ICa | Interstitial cells a | wk13 | AGTR2 | 186 | 338 | 1.13 | 0.34 | 0.01 | 1.09694084659102e-67 | 3.69603248850377e-63 |
73 | 4 | ICa | Interstitial cells a | wk13 | ALX1 | 8092 | 1494 | 1.13 | 0.4 | 0.008 | 8.49373307400119e-102 | 2.86187842195396e-97 |
73 | 4 | ICa | Interstitial cells a | wk13 | CYP1B1 | 1545 | 2597 | 1.12 | 0.51 | 0.09 | 1.41054281802048e-17 | 4.75268297103821e-13 |
73 | 4 | ICa | Interstitial cells a | wk13 | LDB2 | 9079 | 6533 | 1.12 | 0.42 | 0.02 | 5.65146940513337e-48 | 1.90420610136564e-43 |
73 | 4 | ICa | Interstitial cells a | wk13 | PDGFRA | 5156 | 8803 | 1.12 | 0.4 | 0.009 | 5.94037358703466e-90 | 2.00154947641546e-85 |
73 | 4 | ICa | Interstitial cells a | wk13 | EDNRA | 1909 | 3179 | 1.12 | 0.48 | 0.01 | 1.17391581068698e-79 | 3.95539193252872e-75 |
73 | 4 | ICa | Interstitial cells a | wk13 | MARCKS | 4082 | 6759 | 1.11 | 0.88 | 0.44 | 1.29942254847532e-12 | 4.37827433483274e-08 |
73 | 4 | ICa | Interstitial cells a | wk13 | EMCN | 51705 | 16041 | 1.1 | 0.45 | 0.01 | 1.07375320372644e-84 | 3.61790404463586e-80 |
73 | 4 | ICa | Interstitial cells a | wk13 | SERPINH1 | 871 | 1546 | 1.1 | 0.97 | 0.45 | 7.92657235221296e-17 | 2.67077928835463e-12 |
73 | 4 | ICa | Interstitial cells a | wk13 | C7 | 730 | 1346 | 1.09 | 0.2 | 0.007 | 4.77303272333661e-34 | 1.60822564580104e-29 |
73 | 4 | ICa | Interstitial cells a | wk13 | PTN | 5764 | 9630 | 1.07 | 0.51 | 0.19 | 1.93280257295985e-07 | 0.00651238498933091 |
73 | 4 | ICa | Interstitial cells a | wk13 | ITGA1 | 3672 | 6134 | 1.06 | 0.6 | 0.04 | 1.08138964019617e-50 | 3.64363425367698e-46 |
73 | 4 | ICa | Interstitial cells a | wk13 | COL5A2 | 1290 | 2210 | 1.05 | 0.45 | 0.03 | 3.86647858696849e-41 | 1.30277129509316e-36 |
73 | 4 | ICa | Interstitial cells a | wk13 | AGTR1 | 185 | 336 | 1.03 | 0.28 | 0.007 | 3.26047224069337e-63 | 1.09858351677922e-58 |
73 | 4 | ICa | Interstitial cells a | wk13 | FGF7 | 2252 | 3685 | 1.02 | 0.4 | 0.004 | 3.43434399144702e-146 | 1.15716786447816e-141 |
73 | 4 | ICa | Interstitial cells a | wk13 | GUCY1A1 | 2982 | 4685 | 1.02 | 0.37 | 0.03 | 1.6272043323031e-23 | 5.48270227726205e-19 |
73 | 4 | ICa | Interstitial cells a | wk13 | FLRT2 | 23768 | 3761 | 1.02 | 0.37 | 0.04 | 2.14310070901369e-18 | 7.22096352895073e-14 |
73 | 4 | ICa | Interstitial cells a | wk13 | CPED1 | 79974 | 26159 | 1 | 0.28 | 0.009 | 4.1698555046946e-53 | 1.4049911137518e-48 |
73 | 4 | ICa | Interstitial cells a | wk13 | GSTM5 | 2949 | 4637 | 0.99 | 0.45 | 0.01 | 3.30285764388725e-68 | 1.11286485453137e-63 |
73 | 4 | ICa | Interstitial cells a | wk13 | CRABP1 | 1381 | 2338 | 0.98 | 0.22 | 0.01 | 4.03801367707745e-21 | 1.36056832835448e-16 |
73 | 4 | ICa | Interstitial cells a | wk13 | PCDH18 | 54510 | 14268 | 0.97 | 0.4 | 0.03 | 2.01706061785183e-29 | 6.79628404578995e-25 |
73 | 4 | ICa | Interstitial cells a | wk13 | MOXD1 | 26002 | 21063 | 0.97 | 0.4 | 0.02 | 7.06117607938422e-46 | 2.37919266818772e-41 |
73 | 4 | ICa | Interstitial cells a | wk13 | THY1 | 7070 | 11801 | 0.97 | 0.45 | 0.03 | 1.89115488957218e-42 | 6.37205728492451e-38 |
73 | 4 | ICa | Interstitial cells a | wk13 | HOPX | 84525 | 24961 | 0.97 | 0.25 | 0.006 | 1.0314921065907e-60 | 3.47550950394669e-56 |
73 | 4 | ICa | Interstitial cells a | wk13 | TMSB4X | 7114 | 11881 | 0.97 | 1 | 0.98 | 7.27580324575991e-15 | 2.45150914562634e-10 |
73 | 4 | ICa | Interstitial cells a | wk13 | MFAP2 | 4237 | 7033 | 0.94 | 0.54 | 0.22 | 1.60704429206457e-07 | 0.00541477503768236 |
73 | 4 | ICa | Interstitial cells a | wk13 | AKAP12 | 9590 | 370 | 0.92 | 0.74 | 0.24 | 1.79427272763355e-13 | 6.0456225284885e-09 |
73 | 4 | ICa | Interstitial cells a | wk13 | FSTL1 | 11167 | 3972 | 0.91 | 0.91 | 0.51 | 2.42712894077797e-11 | 8.1779682530573e-07 |
73 | 4 | ICa | Interstitial cells a | wk13 | FABP5 | 2171 | 3560 | 0.91 | 0.57 | 0.26 | 7.97134728691762e-07 | 0.02 |
73 | 4 | ICa | Interstitial cells a | wk13 | CNN2 | 1265 | 2156 | 0.9 | 0.77 | 0.31 | 1.12991037383515e-11 | 3.80712001360015e-07 |
73 | 4 | ICa | Interstitial cells a | wk13 | NR2F2-AS1 | 644192 | 44222 | 0.9 | 0.31 | 0.07 | 1.34548723923228e-08 | 0.000453348470386926 |
73 | 4 | ICa | Interstitial cells a | wk13 | ZEB2 | 9839 | 14881 | 0.87 | 0.42 | 0.11 | 1.76179292430713e-10 | 5.93618507916045e-06 |
73 | 4 | ICa | Interstitial cells a | wk13 | TMEM173 | 340061 | 27962 | 0.87 | 0.2 | 0.007 | 2.39624016664581e-34 | 8.07389161749639e-30 |
73 | 4 | ICa | Interstitial cells a | wk13 | MEIS2 | 4212 | 7001 | 0.86 | 0.51 | 0.13 | 3.16997728430347e-11 | 1.06809214617321e-06 |
73 | 4 | ICa | Interstitial cells a | wk13 | C12orf57 | 113246 | 29521 | 0.85 | 0.62 | 0.3 | 3.67576082077643e-08 | 0.00123851085095241 |
73 | 4 | ICa | Interstitial cells a | wk13 | MCTP2 | 55784 | 25636 | 0.85 | 0.22 | 0.004 | 4.54921286716115e-61 | 1.53281178346128e-56 |
73 | 4 | ICa | Interstitial cells a | wk13 | COL21A1 | 81578 | 17025 | 0.85 | 0.28 | 0.008 | 2.22175015948056e-57 | 7.48596498735381e-53 |
73 | 4 | ICa | Interstitial cells a | wk13 | RPS12 | 6206 | 10385 | 0.84 | 1 | 0.96 | 1.38273610965811e-17 | 4.65899104788204e-13 |
73 | 4 | ICa | Interstitial cells a | wk13 | CD248 | 57124 | 18219 | 0.83 | 0.31 | 0.009 | 8.30104741026376e-63 | 2.79695491441427e-58 |
73 | 4 | ICa | Interstitial cells a | wk13 | ACTN1 | 87 | 163 | 0.83 | 0.45 | 0.07 | 4.39633250911873e-17 | 1.48130027562246e-12 |
73 | 4 | ICa | Interstitial cells a | wk13 | FHL2 | 2274 | 3703 | 0.83 | 0.37 | 0.05 | 2.45644020992258e-16 | 8.27672964331316e-12 |
73 | 4 | ICa | Interstitial cells a | wk13 | RPL30 | 6156 | 10333 | 0.83 | 1 | 0.94 | 1.37113182974178e-14 | 4.61989158713197e-10 |
73 | 4 | ICa | Interstitial cells a | wk13 | DCN | 1634 | 2705 | 0.82 | 0.25 | 0.04 | 1.11620038209532e-09 | 3.76092556743198e-05 |
73 | 4 | ICa | Interstitial cells a | wk13 | HIC1 | 3090 | 4909 | 0.82 | 0.25 | 0.004 | 2.55162331738139e-77 | 8.59743960558486e-73 |
73 | 4 | ICa | Interstitial cells a | wk13 | FBN2 | 2201 | 3604 | 0.81 | 0.22 | 0.04 | 1.01623294102829e-08 | 0.000342409527150073 |
73 | 4 | ICa | Interstitial cells a | wk13 | COL4A1 | 1282 | 2202 | 0.81 | 0.65 | 0.24 | 2.3973904186569e-10 | 8.07776727662256e-06 |
73 | 4 | ICa | Interstitial cells a | wk13 | CDH11 | 1009 | 1750 | 0.8 | 0.42 | 0.07 | 9.36086686336381e-16 | 3.1540504809418e-11 |
73 | 4 | ICa | Interstitial cells a | wk13 | GASK1B | 51313 | 25312 | 0.79 | 0.2 | 0.004 | 4.09745421541117e-49 | 1.38059622334064e-44 |
73 | 4 | ICa | Interstitial cells a | wk13 | LEF1 | 51176 | 6551 | 0.79 | 0.28 | 0.03 | 3.34987142712206e-14 | 1.12870567865451e-09 |
73 | 4 | ICa | Interstitial cells a | wk13 | COL6A1 | 1291 | 2211 | 0.78 | 0.51 | 0.2 | 1.49417067133285e-07 | 0.00503445865998891 |
73 | 4 | ICa | Interstitial cells a | wk13 | RPL36A | 6173 | 10359 | 0.78 | 0.94 | 0.62 | 4.09865961299484e-10 | 1.38100237000248e-05 |
73 | 4 | ICa | Interstitial cells a | wk13 | TPBG | 7162 | 12004 | 0.77 | 0.34 | 0.06 | 6.5444973880298e-12 | 2.20510294992276e-07 |
73 | 4 | ICa | Interstitial cells a | wk13 | FXYD6 | 53826 | 4030 | 0.76 | 0.57 | 0.18 | 1.71833640744375e-10 | 5.78976269124098e-06 |
73 | 4 | ICa | Interstitial cells a | wk13 | LAMA2 | 3908 | 6482 | 0.76 | 0.31 | 0.002 | 6.55298515425546e-150 | 2.20796281787483e-145 |
73 | 4 | ICa | Interstitial cells a | wk13 | FKBP10 | 60681 | 18169 | 0.75 | 0.68 | 0.27 | 3.94744091420043e-10 | 1.33005074163069e-05 |
73 | 4 | ICa | Interstitial cells a | wk13 | CRMP1 | 1400 | 2365 | 0.75 | 0.31 | 0.03 | 2.10858114751325e-21 | 7.10465331843114e-17 |
73 | 4 | ICa | Interstitial cells a | wk13 | CHST2 | 9435 | 1970 | 0.75 | 0.31 | 0.04 | 1.93650732902081e-13 | 6.5248677944027e-09 |
73 | 4 | ICa | Interstitial cells a | wk13 | TCEAL7 | 56849 | 28336 | 0.75 | 0.42 | 0.1 | 6.13738970728916e-10 | 2.06793208797401e-05 |
73 | 4 | ICa | Interstitial cells a | wk13 | SSPN | 8082 | 11322 | 0.73 | 0.31 | 0.04 | 2.46017099990001e-15 | 8.2893001670631e-11 |
73 | 4 | ICa | Interstitial cells a | wk13 | LIMA1 | 51474 | 24636 | 0.73 | 0.34 | 0.07 | 3.21177572265597e-09 | 0.00010821757119917 |
73 | 4 | ICa | Interstitial cells a | wk13 | CRTAP | 10491 | 2379 | 0.72 | 0.4 | 0.12 | 8.7929369700412e-08 | 0.00296269218268568 |
73 | 4 | ICa | Interstitial cells a | wk13 | IFI27L2 | 83982 | 19753 | 0.72 | 0.28 | 0.03 | 4.33504336622422e-16 | 1.46064951181559e-11 |
73 | 4 | ICa | Interstitial cells a | wk13 | MEIS1 | 4211 | 7000 | 0.71 | 0.4 | 0.07 | 6.31720694133523e-13 | 2.12851970681349e-08 |
73 | 4 | ICa | Interstitial cells a | wk13 | TBX3 | 6926 | 11602 | 0.71 | 0.2 | 0.01 | 1.49931678804092e-21 | 5.05179798562507e-17 |
73 | 4 | ICa | Interstitial cells a | wk13 | LRRC17 | 10234 | 16895 | 0.7 | 0.25 | 0.01 | 4.07759102103392e-30 | 1.37390351862717e-25 |
73 | 4 | ICa | Interstitial cells a | wk13 | ANXA6 | 309 | 544 | 0.7 | 0.4 | 0.08 | 3.41262790092271e-12 | 1.1498508449369e-07 |
73 | 4 | ICa | Interstitial cells a | wk13 | RPL10 | 6134 | 10298 | 0.7 | 1 | 0.99 | 1.29076286524371e-15 | 4.34909639815214e-11 |