Marker Genes
Dataset: Single-cell transcriptomics reveals gene expression dynamics of human fetal kidney development
- tissue: Kidney
- ontology: Kidney
- genotype: -
- stage: Fetal
- treatment condition: WT
- cell/nucleus: Cells
- pmid: 30789893
- subset name: wk13
- total genes: Not reported
- clustering: scran
- pseudotime: Monocle 2
- link: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE114530
Rows:100
| dataset id | cluster id | cluster name | cell type name | sample id | gene symbol | entrez geneid | species specific geneid |
avg log fc (?)
|
pct 1 | pct 2 | p value | padj |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 73 | 4 | ICa | Interstitial cells a | wk13 | LGALS1 | 3956 | 6561 | 2.7 | 1 | 0.05 | 2.1264872449962E-116 | 7.1649861232903E-112 |
| 73 | 4 | ICa | Interstitial cells a | wk13 | SULT1E1 | 6783 | 11377 | 2.51 | 0.62 | 0.05 | 2.8005924313848E-50 | 9.4363161383079E-46 |
| 73 | 4 | ICa | Interstitial cells a | wk13 | COL1A1 | 1277 | 2197 | 2.29 | 0.94 | 0.07 | 2.2430970753384E-82 | 7.5578912856451E-78 |
| 73 | 4 | ICa | Interstitial cells a | wk13 | COL1A2 | 1278 | 2198 | 2.09 | 0.91 | 0.07 | 4.8642200418199E-78 | 1.6389503008908E-73 |
| 73 | 4 | ICa | Interstitial cells a | wk13 | TPM2 | 7169 | 12011 | 1.86 | 0.88 | 0.13 | 8.1644416272269E-45 | 2.7509269618778E-40 |
| 73 | 4 | ICa | Interstitial cells a | wk13 | COL3A1 | 1281 | 2201 | 1.75 | 1 | 0.27 | 4.9340156245984E-31 | 1.6624672245522E-26 |
| 73 | 4 | ICa | Interstitial cells a | wk13 | PCOLCE | 5118 | 8738 | 1.7 | 0.62 | 0.03 | 1.0109290135496E-80 | 3.4062242182541E-76 |
| 73 | 4 | ICa | Interstitial cells a | wk13 | TAGLN | 6876 | 11553 | 1.69 | 0.54 | 0.05 | 1.9852690498841E-37 | 6.6891655366795E-33 |
| 73 | 4 | ICa | Interstitial cells a | wk13 | OLFML3 | 56944 | 24956 | 1.66 | 0.68 | 0.02 | 7.9798470386895E-113 | 2.688729661216E-108 |
| 73 | 4 | ICa | Interstitial cells a | wk13 | EMILIN1 | 11117 | 19880 | 1.66 | 0.6 | 0.06 | 1.7223035294016E-38 | 5.8031295119658E-34 |
| 73 | 4 | ICa | Interstitial cells a | wk13 | MFAP4 | 4239 | 7035 | 1.62 | 0.68 | 0.04 | 2.1307884657626E-75 | 7.1794786565406E-71 |
| 73 | 4 | ICa | Interstitial cells a | wk13 | CLDN11 | 5010 | 8514 | 1.58 | 0.48 | 0.03 | 1.8268807640096E-40 | 6.1554920462539E-36 |
| 73 | 4 | ICa | Interstitial cells a | wk13 | RBP1 | 5947 | 9919 | 1.57 | 0.97 | 0.28 | 1.2739518319623E-28 | 4.2924533026137E-24 |
| 73 | 4 | ICa | Interstitial cells a | wk13 | CTSC | 1075 | 2528 | 1.57 | 0.74 | 0.14 | 3.015698920532E-27 | 1.016109594284E-22 |
| 73 | 4 | ICa | Interstitial cells a | wk13 | IGF2 | 3481 | 5466 | 1.56 | 0.97 | 0.27 | 1.4314283971337E-27 | 4.8230548413022E-23 |
| 73 | 4 | ICa | Interstitial cells a | wk13 | TGFBI | 7045 | 11771 | 1.55 | 0.62 | 0.01 | 1.4575828766544E-153 | 4.9111797445992E-149 |
| 73 | 4 | ICa | Interstitial cells a | wk13 | ALDH1A2 | 8854 | 15472 | 1.48 | 0.8 | 0.2 | 5.3861248118406E-23 | 1.8148008941016E-18 |
| 73 | 4 | ICa | Interstitial cells a | wk13 | SNAI2 | 6591 | 11094 | 1.46 | 0.45 | 0.03 | 1.0577938417509E-37 | 3.5641305703956E-33 |
| 73 | 4 | ICa | Interstitial cells a | wk13 | BGN | 633 | 1044 | 1.43 | 0.65 | 0.14 | 4.9402979523997E-19 | 1.6645839920816E-14 |
| 73 | 4 | ICa | Interstitial cells a | wk13 | FBLN5 | 10516 | 3602 | 1.43 | 0.51 | 0.02 | 4.348804123349E-70 | 1.4652860613212E-65 |
| 73 | 4 | ICa | Interstitial cells a | wk13 | TNC | 3371 | 5318 | 1.43 | 0.51 | 0.01 | 5.6653122208435E-108 | 1.908870299691E-103 |
| 73 | 4 | ICa | Interstitial cells a | wk13 | CALD1 | 800 | 1441 | 1.41 | 0.91 | 0.41 | 3.616946395745E-16 | 1.2186939185823E-11 |
| 73 | 4 | ICa | Interstitial cells a | wk13 | COL6A3 | 1293 | 2213 | 1.38 | 0.54 | 0.01 | 6.2209064577765E-92 | 2.0960722218832E-87 |
| 73 | 4 | ICa | Interstitial cells a | wk13 | IGFBP5 | 3488 | 5474 | 1.31 | 0.42 | 0.02 | 1.556646807201E-45 | 5.244965752183E-41 |
| 73 | 4 | ICa | Interstitial cells a | wk13 | MDFI | 4188 | 6967 | 1.3 | 0.51 | 0.02 | 1.9260666716906E-77 | 6.4896890435944E-73 |
| 73 | 4 | ICa | Interstitial cells a | wk13 | ACTA2 | 59 | 130 | 1.29 | 0.45 | 0.02 | 2.3082177847771E-58 | 7.7773090040279E-54 |
| 73 | 4 | ICa | Interstitial cells a | wk13 | B2M | 567 | 914 | 1.22 | 0.94 | 0.56 | 3.5637096825595E-15 | 1.2007563404416E-10 |
| 73 | 4 | ICa | Interstitial cells a | wk13 | PRSS23 | 11098 | 14370 | 1.18 | 0.45 | 0.04 | 4.7593729366379E-34 | 1.6036231172708E-29 |
| 73 | 4 | ICa | Interstitial cells a | wk13 | FN1 | 2335 | 3778 | 1.17 | 0.62 | 0.05 | 1.5717923334566E-45 | 5.2959970883488E-41 |
| 73 | 4 | ICa | Interstitial cells a | wk13 | GNG2 | 54331 | 4404 | 1.15 | 0.54 | 0.01 | 1.5147037309402E-99 | 5.10364275103E-95 |
| 73 | 4 | ICa | Interstitial cells a | wk13 | MEG3 | 55384 | 14575 | 1.14 | 0.6 | 0.06 | 1.6272069085155E-36 | 5.4827109575522E-32 |
| 73 | 4 | ICa | Interstitial cells a | wk13 | MMP2 | 4313 | 7166 | 1.14 | 0.51 | 0.02 | 1.2226034465668E-61 | 4.1194400528622E-57 |
| 73 | 4 | ICa | Interstitial cells a | wk13 | PLAT | 5327 | 9051 | 1.13 | 0.62 | 0.07 | 3.5029052016109E-35 | 1.1802688786308E-30 |
| 73 | 4 | ICa | Interstitial cells a | wk13 | AGTR2 | 186 | 338 | 1.13 | 0.34 | 0.01 | 1.096940846591E-67 | 3.6960324885038E-63 |
| 73 | 4 | ICa | Interstitial cells a | wk13 | ALX1 | 8092 | 1494 | 1.13 | 0.4 | 0.008 | 8.4937330740012E-102 | 2.861878421954E-97 |
| 73 | 4 | ICa | Interstitial cells a | wk13 | CYP1B1 | 1545 | 2597 | 1.12 | 0.51 | 0.09 | 1.4105428180205E-17 | 4.7526829710382E-13 |
| 73 | 4 | ICa | Interstitial cells a | wk13 | LDB2 | 9079 | 6533 | 1.12 | 0.42 | 0.02 | 5.6514694051334E-48 | 1.9042061013656E-43 |
| 73 | 4 | ICa | Interstitial cells a | wk13 | PDGFRA | 5156 | 8803 | 1.12 | 0.4 | 0.009 | 5.9403735870347E-90 | 2.0015494764155E-85 |
| 73 | 4 | ICa | Interstitial cells a | wk13 | EDNRA | 1909 | 3179 | 1.12 | 0.48 | 0.01 | 1.173915810687E-79 | 3.9553919325287E-75 |
| 73 | 4 | ICa | Interstitial cells a | wk13 | MARCKS | 4082 | 6759 | 1.11 | 0.88 | 0.44 | 1.2994225484753E-12 | 4.3782743348327E-8 |
| 73 | 4 | ICa | Interstitial cells a | wk13 | EMCN | 51705 | 16041 | 1.1 | 0.45 | 0.01 | 1.0737532037264E-84 | 3.6179040446359E-80 |
| 73 | 4 | ICa | Interstitial cells a | wk13 | SERPINH1 | 871 | 1546 | 1.1 | 0.97 | 0.45 | 7.926572352213E-17 | 2.6707792883546E-12 |
| 73 | 4 | ICa | Interstitial cells a | wk13 | C7 | 730 | 1346 | 1.09 | 0.2 | 0.007 | 4.7730327233366E-34 | 1.608225645801E-29 |
| 73 | 4 | ICa | Interstitial cells a | wk13 | PTN | 5764 | 9630 | 1.07 | 0.51 | 0.19 | 1.9328025729598E-7 | 0.0065123849893309 |
| 73 | 4 | ICa | Interstitial cells a | wk13 | ITGA1 | 3672 | 6134 | 1.06 | 0.6 | 0.04 | 1.0813896401962E-50 | 3.643634253677E-46 |
| 73 | 4 | ICa | Interstitial cells a | wk13 | COL5A2 | 1290 | 2210 | 1.05 | 0.45 | 0.03 | 3.8664785869685E-41 | 1.3027712950932E-36 |
| 73 | 4 | ICa | Interstitial cells a | wk13 | AGTR1 | 185 | 336 | 1.03 | 0.28 | 0.007 | 3.2604722406934E-63 | 1.0985835167792E-58 |
| 73 | 4 | ICa | Interstitial cells a | wk13 | FGF7 | 2252 | 3685 | 1.02 | 0.4 | 0.004 | 3.434343991447E-146 | 1.1571678644782E-141 |
| 73 | 4 | ICa | Interstitial cells a | wk13 | GUCY1A1 | 2982 | 4685 | 1.02 | 0.37 | 0.03 | 1.6272043323031E-23 | 5.4827022772621E-19 |
| 73 | 4 | ICa | Interstitial cells a | wk13 | FLRT2 | 23768 | 3761 | 1.02 | 0.37 | 0.04 | 2.1431007090137E-18 | 7.2209635289507E-14 |
| 73 | 4 | ICa | Interstitial cells a | wk13 | CPED1 | 79974 | 26159 | 1 | 0.28 | 0.009 | 4.1698555046946E-53 | 1.4049911137518E-48 |
| 73 | 4 | ICa | Interstitial cells a | wk13 | GSTM5 | 2949 | 4637 | 0.99 | 0.45 | 0.01 | 3.3028576438873E-68 | 1.1128648545314E-63 |
| 73 | 4 | ICa | Interstitial cells a | wk13 | CRABP1 | 1381 | 2338 | 0.98 | 0.22 | 0.01 | 4.0380136770774E-21 | 1.3605683283545E-16 |
| 73 | 4 | ICa | Interstitial cells a | wk13 | PCDH18 | 54510 | 14268 | 0.97 | 0.4 | 0.03 | 2.0170606178518E-29 | 6.79628404579E-25 |
| 73 | 4 | ICa | Interstitial cells a | wk13 | MOXD1 | 26002 | 21063 | 0.97 | 0.4 | 0.02 | 7.0611760793842E-46 | 2.3791926681877E-41 |
| 73 | 4 | ICa | Interstitial cells a | wk13 | THY1 | 7070 | 11801 | 0.97 | 0.45 | 0.03 | 1.8911548895722E-42 | 6.3720572849245E-38 |
| 73 | 4 | ICa | Interstitial cells a | wk13 | HOPX | 84525 | 24961 | 0.97 | 0.25 | 0.006 | 1.0314921065907E-60 | 3.4755095039467E-56 |
| 73 | 4 | ICa | Interstitial cells a | wk13 | TMSB4X | 7114 | 11881 | 0.97 | 1 | 0.98 | 7.2758032457599E-15 | 2.4515091456263E-10 |
| 73 | 4 | ICa | Interstitial cells a | wk13 | MFAP2 | 4237 | 7033 | 0.94 | 0.54 | 0.22 | 1.6070442920646E-7 | 0.0054147750376824 |
| 73 | 4 | ICa | Interstitial cells a | wk13 | AKAP12 | 9590 | 370 | 0.92 | 0.74 | 0.24 | 1.7942727276336E-13 | 6.0456225284885E-9 |
| 73 | 4 | ICa | Interstitial cells a | wk13 | FSTL1 | 11167 | 3972 | 0.91 | 0.91 | 0.51 | 2.427128940778E-11 | 8.1779682530573E-7 |
| 73 | 4 | ICa | Interstitial cells a | wk13 | FABP5 | 2171 | 3560 | 0.91 | 0.57 | 0.26 | 7.9713472869176E-7 | 0.02 |
| 73 | 4 | ICa | Interstitial cells a | wk13 | CNN2 | 1265 | 2156 | 0.9 | 0.77 | 0.31 | 1.1299103738352E-11 | 3.8071200136001E-7 |
| 73 | 4 | ICa | Interstitial cells a | wk13 | NR2F2-AS1 | 644192 | 44222 | 0.9 | 0.31 | 0.07 | 1.3454872392323E-8 | 0.00045334847038693 |
| 73 | 4 | ICa | Interstitial cells a | wk13 | ZEB2 | 9839 | 14881 | 0.87 | 0.42 | 0.11 | 1.7617929243071E-10 | 5.9361850791604E-6 |
| 73 | 4 | ICa | Interstitial cells a | wk13 | TMEM173 | 340061 | 27962 | 0.87 | 0.2 | 0.007 | 2.3962401666458E-34 | 8.0738916174964E-30 |
| 73 | 4 | ICa | Interstitial cells a | wk13 | MEIS2 | 4212 | 7001 | 0.86 | 0.51 | 0.13 | 3.1699772843035E-11 | 1.0680921461732E-6 |
| 73 | 4 | ICa | Interstitial cells a | wk13 | C12orf57 | 113246 | 29521 | 0.85 | 0.62 | 0.3 | 3.6757608207764E-8 | 0.0012385108509524 |
| 73 | 4 | ICa | Interstitial cells a | wk13 | MCTP2 | 55784 | 25636 | 0.85 | 0.22 | 0.004 | 4.5492128671612E-61 | 1.5328117834613E-56 |
| 73 | 4 | ICa | Interstitial cells a | wk13 | COL21A1 | 81578 | 17025 | 0.85 | 0.28 | 0.008 | 2.2217501594806E-57 | 7.4859649873538E-53 |
| 73 | 4 | ICa | Interstitial cells a | wk13 | RPS12 | 6206 | 10385 | 0.84 | 1 | 0.96 | 1.3827361096581E-17 | 4.658991047882E-13 |
| 73 | 4 | ICa | Interstitial cells a | wk13 | CD248 | 57124 | 18219 | 0.83 | 0.31 | 0.009 | 8.3010474102638E-63 | 2.7969549144143E-58 |
| 73 | 4 | ICa | Interstitial cells a | wk13 | ACTN1 | 87 | 163 | 0.83 | 0.45 | 0.07 | 4.3963325091187E-17 | 1.4813002756225E-12 |
| 73 | 4 | ICa | Interstitial cells a | wk13 | FHL2 | 2274 | 3703 | 0.83 | 0.37 | 0.05 | 2.4564402099226E-16 | 8.2767296433132E-12 |
| 73 | 4 | ICa | Interstitial cells a | wk13 | RPL30 | 6156 | 10333 | 0.83 | 1 | 0.94 | 1.3711318297418E-14 | 4.619891587132E-10 |
| 73 | 4 | ICa | Interstitial cells a | wk13 | DCN | 1634 | 2705 | 0.82 | 0.25 | 0.04 | 1.1162003820953E-9 | 3.760925567432E-5 |
| 73 | 4 | ICa | Interstitial cells a | wk13 | HIC1 | 3090 | 4909 | 0.82 | 0.25 | 0.004 | 2.5516233173814E-77 | 8.5974396055849E-73 |
| 73 | 4 | ICa | Interstitial cells a | wk13 | FBN2 | 2201 | 3604 | 0.81 | 0.22 | 0.04 | 1.0162329410283E-8 | 0.00034240952715007 |
| 73 | 4 | ICa | Interstitial cells a | wk13 | COL4A1 | 1282 | 2202 | 0.81 | 0.65 | 0.24 | 2.3973904186569E-10 | 8.0777672766226E-6 |
| 73 | 4 | ICa | Interstitial cells a | wk13 | CDH11 | 1009 | 1750 | 0.8 | 0.42 | 0.07 | 9.3608668633638E-16 | 3.1540504809418E-11 |
| 73 | 4 | ICa | Interstitial cells a | wk13 | GASK1B | 51313 | 25312 | 0.79 | 0.2 | 0.004 | 4.0974542154112E-49 | 1.3805962233406E-44 |
| 73 | 4 | ICa | Interstitial cells a | wk13 | LEF1 | 51176 | 6551 | 0.79 | 0.28 | 0.03 | 3.3498714271221E-14 | 1.1287056786545E-9 |
| 73 | 4 | ICa | Interstitial cells a | wk13 | COL6A1 | 1291 | 2211 | 0.78 | 0.51 | 0.2 | 1.4941706713329E-7 | 0.0050344586599889 |
| 73 | 4 | ICa | Interstitial cells a | wk13 | RPL36A | 6173 | 10359 | 0.78 | 0.94 | 0.62 | 4.0986596129948E-10 | 1.3810023700025E-5 |
| 73 | 4 | ICa | Interstitial cells a | wk13 | TPBG | 7162 | 12004 | 0.77 | 0.34 | 0.06 | 6.5444973880298E-12 | 2.2051029499228E-7 |
| 73 | 4 | ICa | Interstitial cells a | wk13 | FXYD6 | 53826 | 4030 | 0.76 | 0.57 | 0.18 | 1.7183364074437E-10 | 5.789762691241E-6 |
| 73 | 4 | ICa | Interstitial cells a | wk13 | LAMA2 | 3908 | 6482 | 0.76 | 0.31 | 0.002 | 6.5529851542555E-150 | 2.2079628178748E-145 |
| 73 | 4 | ICa | Interstitial cells a | wk13 | FKBP10 | 60681 | 18169 | 0.75 | 0.68 | 0.27 | 3.9474409142004E-10 | 1.3300507416307E-5 |
| 73 | 4 | ICa | Interstitial cells a | wk13 | CRMP1 | 1400 | 2365 | 0.75 | 0.31 | 0.03 | 2.1085811475133E-21 | 7.1046533184311E-17 |
| 73 | 4 | ICa | Interstitial cells a | wk13 | CHST2 | 9435 | 1970 | 0.75 | 0.31 | 0.04 | 1.9365073290208E-13 | 6.5248677944027E-9 |
| 73 | 4 | ICa | Interstitial cells a | wk13 | TCEAL7 | 56849 | 28336 | 0.75 | 0.42 | 0.1 | 6.1373897072892E-10 | 2.067932087974E-5 |
| 73 | 4 | ICa | Interstitial cells a | wk13 | SSPN | 8082 | 11322 | 0.73 | 0.31 | 0.04 | 2.4601709999E-15 | 8.2893001670631E-11 |
| 73 | 4 | ICa | Interstitial cells a | wk13 | LIMA1 | 51474 | 24636 | 0.73 | 0.34 | 0.07 | 3.211775722656E-9 | 0.00010821757119917 |
| 73 | 4 | ICa | Interstitial cells a | wk13 | CRTAP | 10491 | 2379 | 0.72 | 0.4 | 0.12 | 8.7929369700412E-8 | 0.0029626921826857 |
| 73 | 4 | ICa | Interstitial cells a | wk13 | IFI27L2 | 83982 | 19753 | 0.72 | 0.28 | 0.03 | 4.3350433662242E-16 | 1.4606495118156E-11 |
| 73 | 4 | ICa | Interstitial cells a | wk13 | MEIS1 | 4211 | 7000 | 0.71 | 0.4 | 0.07 | 6.3172069413352E-13 | 2.1285197068135E-8 |
| 73 | 4 | ICa | Interstitial cells a | wk13 | TBX3 | 6926 | 11602 | 0.71 | 0.2 | 0.01 | 1.4993167880409E-21 | 5.0517979856251E-17 |
| 73 | 4 | ICa | Interstitial cells a | wk13 | LRRC17 | 10234 | 16895 | 0.7 | 0.25 | 0.01 | 4.0775910210339E-30 | 1.3739035186272E-25 |
| 73 | 4 | ICa | Interstitial cells a | wk13 | ANXA6 | 309 | 544 | 0.7 | 0.4 | 0.08 | 3.4126279009227E-12 | 1.1498508449369E-7 |
| 73 | 4 | ICa | Interstitial cells a | wk13 | RPL10 | 6134 | 10298 | 0.7 | 1 | 0.99 | 1.2907628652437E-15 | 4.3490963981521E-11 |