Marker Genes
Dataset: Single-cell transcriptomics reveals gene expression dynamics of human fetal kidney development
- tissue: Kidney
- ontology: Kidney
- genotype: -
- stage: Fetal
- treatment condition: WT
- cell/nucleus: Cells
- pmid: 30789893
- subset name: wk13
- total genes: Not reported
- clustering: scran
- pseudotime: Monocle 2
- link: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE114530
Rows:100
dataset id | cluster id | cluster name | cell type name | sample id | gene symbol | entrez geneid | species specific geneid |
avg log fc (?)
|
pct 1 | pct 2 | p value | padj |
---|---|---|---|---|---|---|---|---|---|---|---|---|
73 | 3 | ErPrT | Early proximal tubule | wk13 | APOE | 348 | 613 | 2.36 | 0.97 | 0.24 | 1.28936010404385e-261 | 4.34436993456536e-257 |
73 | 3 | ErPrT | Early proximal tubule | wk13 | LINC01781 | 101927412 | 52571 | 2.02 | 0.79 | 0.08 | 6.00371084974157e-295 | 2.02289033371192e-290 |
73 | 3 | ErPrT | Early proximal tubule | wk13 | SMIM24 | 284422 | 37244 | 1.79 | 0.86 | 0.12 | 3.71826690975925e-287 | 1.25283285257428e-282 |
73 | 3 | ErPrT | Early proximal tubule | wk13 | APOM | 55937 | 13916 | 1.78 | 0.67 | 0.06 | 1.35491789774321e-269 | 4.56526036465598e-265 |
73 | 3 | ErPrT | Early proximal tubule | wk13 | APOA1 | 335 | 600 | 1.65 | 0.37 | 0.02 | 4.51359677703074e-162 | 1.52081129805274e-157 |
73 | 3 | ErPrT | Early proximal tubule | wk13 | FTL | 2512 | 3999 | 1.63 | 1 | 0.95 | 5.06580640501331e-198 | 1.70687281010518e-193 |
73 | 3 | ErPrT | Early proximal tubule | wk13 | CUBN | 8029 | 2548 | 1.6 | 0.66 | 0.02 | 0 | 0 |
73 | 3 | ErPrT | Early proximal tubule | wk13 | AMN | 81693 | 14604 | 1.55 | 0.72 | 0.05 | 0 | 0 |
73 | 3 | ErPrT | Early proximal tubule | wk13 | SLC5A8 | 160728 | 19119 | 1.51 | 0.58 | 0.02 | 1.54831116628688e-283 | 5.21687964368701e-279 |
73 | 3 | ErPrT | Early proximal tubule | wk13 | AFP | 174 | 317 | 1.51 | 0.63 | 0.02 | 0 | 0 |
73 | 3 | ErPrT | Early proximal tubule | wk13 | GLYATL1 | 92292 | 30519 | 1.5 | 0.65 | 0.07 | 5.24320339770598e-223 | 1.76664495282305e-218 |
73 | 3 | ErPrT | Early proximal tubule | wk13 | MSRB1 | 51734 | 14133 | 1.33 | 0.75 | 0.24 | 1.26716007495832e-119 | 4.26956915656457e-115 |
73 | 3 | ErPrT | Early proximal tubule | wk13 | GATM | 2628 | 4175 | 1.33 | 0.5 | 0.04 | 1.02241885237996e-183 | 3.44493808120902e-179 |
73 | 3 | ErPrT | Early proximal tubule | wk13 | PDZK1 | 5174 | 8821 | 1.31 | 0.69 | 0.07 | 2.66934363757066e-235 | 8.99408645243057e-231 |
73 | 3 | ErPrT | Early proximal tubule | wk13 | DSEL | 92126 | 18144 | 1.3 | 0.66 | 0.08 | 4.09930747031024e-214 | 1.38122065904633e-209 |
73 | 3 | ErPrT | Early proximal tubule | wk13 | GPX3 | 2878 | 4555 | 1.28 | 0.59 | 0.1 | 2.59714433947149e-145 | 8.75081813741525e-141 |
73 | 3 | ErPrT | Early proximal tubule | wk13 | SERPINF1 | 5176 | 8824 | 1.28 | 0.71 | 0.17 | 5.313833182151e-138 | 1.79044295239396e-133 |
73 | 3 | ErPrT | Early proximal tubule | wk13 | SLC3A1 | 6519 | 11025 | 1.27 | 0.65 | 0.06 | 2.0948009577188e-232 | 7.05822234693772e-228 |
73 | 3 | ErPrT | Early proximal tubule | wk13 | CARMIL1 | 55604 | 21581 | 1.23 | 0.57 | 0.14 | 2.72860491793625e-102 | 9.19376141049441e-98 |
73 | 3 | ErPrT | Early proximal tubule | wk13 | UGT3A1 | 133688 | 26625 | 1.23 | 0.58 | 0.05 | 2.20508197401384e-208 | 7.42980320324223e-204 |
73 | 3 | ErPrT | Early proximal tubule | wk13 | S100A10 | 6281 | 10487 | 1.18 | 0.84 | 0.25 | 1.23591980236391e-142 | 4.16430818208497e-138 |
73 | 3 | ErPrT | Early proximal tubule | wk13 | TMEM176A | 55365 | 24930 | 1.18 | 0.66 | 0.07 | 1.5385798993945e-221 | 5.18409111301982e-217 |
73 | 3 | ErPrT | Early proximal tubule | wk13 | RIDA | 10247 | 16897 | 1.17 | 0.75 | 0.2 | 3.45165114058237e-136 | 1.16299933530782e-131 |
73 | 3 | ErPrT | Early proximal tubule | wk13 | MPC2 | 25874 | 24515 | 1.16 | 0.95 | 0.47 | 2.87200072767104e-141 | 9.67691925181479e-137 |
73 | 3 | ErPrT | Early proximal tubule | wk13 | SPP1 | 6696 | 11255 | 1.15 | 0.58 | 0.17 | 1.05151403908312e-80 | 3.54297140328666e-76 |
73 | 3 | ErPrT | Early proximal tubule | wk13 | TNFSF10 | 8743 | 11925 | 1.15 | 0.44 | 0.03 | 2.24423782285844e-180 | 7.56173492033923e-176 |
73 | 3 | ErPrT | Early proximal tubule | wk13 | C1QTNF3 | 114899 | 14326 | 1.14 | 0.51 | 0.09 | 4.65937024420007e-110 | 1.56992821008077e-105 |
73 | 3 | ErPrT | Early proximal tubule | wk13 | AKR1C3 | 8644 | 386 | 1.14 | 0.53 | 0.04 | 7.30461748394746e-204 | 2.46121781504126e-199 |
73 | 3 | ErPrT | Early proximal tubule | wk13 | FLRT3 | 23767 | 3762 | 1.12 | 0.8 | 0.24 | 3.27738843456849e-128 | 1.10428325914351e-123 |
73 | 3 | ErPrT | Early proximal tubule | wk13 | DAB2 | 1601 | 2662 | 1.12 | 0.84 | 0.23 | 5.88564844854824e-149 | 1.98311038825384e-144 |
73 | 3 | ErPrT | Early proximal tubule | wk13 | CYBA | 1535 | 2577 | 1.09 | 0.91 | 0.46 | 8.48226202029246e-113 | 2.85801336511734e-108 |
73 | 3 | ErPrT | Early proximal tubule | wk13 | PSMA2 | 5683 | 9531 | 1.09 | 0.86 | 0.7 | 6.13206873048787e-36 | 2.06613923805058e-31 |
73 | 3 | ErPrT | Early proximal tubule | wk13 | FXYD2 | 486 | 4026 | 1.09 | 0.68 | 0.14 | 6.20002511081631e-138 | 2.08903646083845e-133 |
73 | 3 | ErPrT | Early proximal tubule | wk13 | GCHFR | 2644 | 4194 | 1.06 | 0.63 | 0.11 | 1.39056375178845e-145 | 4.68536550527602e-141 |
73 | 3 | ErPrT | Early proximal tubule | wk13 | VCAN | 1462 | 2464 | 1.05 | 0.78 | 0.27 | 1.14535926008874e-105 | 3.85917349094301e-101 |
73 | 3 | ErPrT | Early proximal tubule | wk13 | ATP6V1F | 9296 | 16832 | 1.04 | 0.89 | 0.46 | 3.58078018789842e-108 | 1.20650807651049e-103 |
73 | 3 | ErPrT | Early proximal tubule | wk13 | ATP1B1 | 481 | 804 | 1.02 | 0.89 | 0.37 | 2.34118862449398e-105 | 7.88840095137001e-101 |
73 | 3 | ErPrT | Early proximal tubule | wk13 | TMEM176B | 28959 | 29596 | 1.01 | 0.55 | 0.06 | 1.0136904290803e-174 | 3.41552853174315e-170 |
73 | 3 | ErPrT | Early proximal tubule | wk13 | BHMT | 635 | 1047 | 1 | 0.38 | 0.03 | 2.56422382892879e-147 | 8.63989576919266e-143 |
73 | 3 | ErPrT | Early proximal tubule | wk13 | ANXA4 | 307 | 542 | 0.99 | 0.78 | 0.31 | 3.3840838695096e-93 | 1.14023321899256e-88 |
73 | 3 | ErPrT | Early proximal tubule | wk13 | DNPH1 | 10591 | 21218 | 0.99 | 0.84 | 0.32 | 9.21950677897756e-112 | 3.1064206141087e-107 |
73 | 3 | ErPrT | Early proximal tubule | wk13 | C11orf54 | 28970 | 30204 | 0.98 | 0.64 | 0.21 | 1.16974851927913e-85 | 3.94135066085909e-81 |
73 | 3 | ErPrT | Early proximal tubule | wk13 | POMC | 5443 | 9201 | 0.97 | 0.56 | 0.16 | 7.64785005799083e-80 | 2.57686659853943e-75 |
73 | 3 | ErPrT | Early proximal tubule | wk13 | LGALS2 | 3957 | 6562 | 0.97 | 0.48 | 0.04 | 4.14560651199454e-174 | 1.39682065815144e-169 |
73 | 3 | ErPrT | Early proximal tubule | wk13 | GK | 2710 | 4289 | 0.97 | 0.52 | 0.08 | 9.97348099124967e-134 | 3.36046468519166e-129 |
73 | 3 | ErPrT | Early proximal tubule | wk13 | ETFB | 2109 | 3482 | 0.96 | 0.78 | 0.37 | 1.77200118249522e-83 | 5.9705807842994e-79 |
73 | 3 | ErPrT | Early proximal tubule | wk13 | GLYAT | 10249 | 13734 | 0.96 | 0.38 | 0.006 | 5.87634663710637e-235 | 1.97997623590662e-230 |
73 | 3 | ErPrT | Early proximal tubule | wk13 | HPN | 3249 | 5155 | 0.95 | 0.52 | 0.08 | 2.31456296720103e-127 | 7.79868846168716e-123 |
73 | 3 | ErPrT | Early proximal tubule | wk13 | CYB5A | 1528 | 2570 | 0.94 | 0.87 | 0.42 | 2.53431482075439e-93 | 8.53912035704986e-89 |
73 | 3 | ErPrT | Early proximal tubule | wk13 | ALDH1A1 | 216 | 402 | 0.91 | 0.62 | 0.12 | 2.66906603442557e-126 | 8.9931510963935e-122 |
73 | 3 | ErPrT | Early proximal tubule | wk13 | ALDH6A1 | 4329 | 7179 | 0.9 | 0.59 | 0.19 | 1.69332642955899e-74 | 5.70549407175605e-70 |
73 | 3 | ErPrT | Early proximal tubule | wk13 | KCNJ15 | 3772 | 6261 | 0.9 | 0.49 | 0.09 | 3.56284636868315e-100 | 1.2004654554641e-95 |
73 | 3 | ErPrT | Early proximal tubule | wk13 | SLC13A1 | 6561 | 10916 | 0.86 | 0.32 | 0.01 | 4.244096500609e-141 | 1.4300058749152e-136 |
73 | 3 | ErPrT | Early proximal tubule | wk13 | LRP2 | 4036 | 6694 | 0.85 | 0.41 | 0.05 | 4.19014600546235e-118 | 1.41182779508048e-113 |
73 | 3 | ErPrT | Early proximal tubule | wk13 | UGT2B7 | 7364 | 12554 | 0.84 | 0.48 | 0.07 | 9.19998039081001e-125 | 3.09984139287953e-120 |
73 | 3 | ErPrT | Early proximal tubule | wk13 | BIN1 | 274 | 1052 | 0.84 | 0.69 | 0.28 | 9.66582021470268e-72 | 3.25680146314192e-67 |
73 | 3 | ErPrT | Early proximal tubule | wk13 | GLS | 2744 | 4331 | 0.84 | 0.64 | 0.22 | 2.70732338100154e-75 | 9.12205539994658e-71 |
73 | 3 | ErPrT | Early proximal tubule | wk13 | GJB1 | 2705 | 4283 | 0.84 | 0.45 | 0.06 | 4.29115536559381e-117 | 1.44586188888318e-112 |
73 | 3 | ErPrT | Early proximal tubule | wk13 | CHCHD10 | 400916 | 15559 | 0.83 | 0.64 | 0.21 | 2.12662503355347e-76 | 7.16545038805506e-72 |
73 | 3 | ErPrT | Early proximal tubule | wk13 | UGT2A3 | 79799 | 28528 | 0.83 | 0.32 | 0.01 | 2.25026382098519e-167 | 7.5820389184275e-163 |
73 | 3 | ErPrT | Early proximal tubule | wk13 | CRYL1 | 51084 | 18246 | 0.83 | 0.56 | 0.14 | 1.44428353953062e-85 | 4.86636895809449e-81 |
73 | 3 | ErPrT | Early proximal tubule | wk13 | AIG1 | 51390 | 21607 | 0.82 | 0.67 | 0.23 | 1.2161323456392e-78 | 4.09763632539671e-74 |
73 | 3 | ErPrT | Early proximal tubule | wk13 | ACAA2 | 10449 | 83 | 0.82 | 0.8 | 0.34 | 8.26261728169057e-81 | 2.78400626689282e-76 |
73 | 3 | ErPrT | Early proximal tubule | wk13 | ACMSD | 130013 | 19288 | 0.81 | 0.4 | 0.04 | 1.03357184670685e-131 | 3.48251698029407e-127 |
73 | 3 | ErPrT | Early proximal tubule | wk13 | ADAMTS9-AS1 | 101929335 | 40625 | 0.81 | 0.46 | 0.07 | 3.3707851724782e-105 | 1.13575235601481e-100 |
73 | 3 | ErPrT | Early proximal tubule | wk13 | FMO1 | 2326 | 3769 | 0.81 | 0.36 | 0.02 | 1.39144011351118e-141 | 4.68831831846457e-137 |
73 | 3 | ErPrT | Early proximal tubule | wk13 | MDH1 | 4190 | 6970 | 0.81 | 0.89 | 0.54 | 3.73531667854439e-78 | 1.25857760166875e-73 |
73 | 3 | ErPrT | Early proximal tubule | wk13 | TMEM150A | 129303 | 24677 | 0.8 | 0.49 | 0.1 | 1.2579418667331e-91 | 4.2385093257705e-87 |
73 | 3 | ErPrT | Early proximal tubule | wk13 | HGD | 3081 | 4892 | 0.8 | 0.39 | 0.05 | 3.7199600043671e-112 | 1.25340332387145e-107 |
73 | 3 | ErPrT | Early proximal tubule | wk13 | OCIAD2 | 132299 | 28685 | 0.78 | 0.81 | 0.4 | 1.9939157077233e-66 | 6.71829958560289e-62 |
73 | 3 | ErPrT | Early proximal tubule | wk13 | CLEC18B | 497190 | 33849 | 0.78 | 0.49 | 0.1 | 1.6992524901824e-90 | 5.72546134042059e-86 |
73 | 3 | ErPrT | Early proximal tubule | wk13 | SLC27A2 | 11001 | 10996 | 0.77 | 0.42 | 0.09 | 5.60747992036057e-72 | 1.88938428436629e-67 |
73 | 3 | ErPrT | Early proximal tubule | wk13 | DPP4 | 1803 | 3009 | 0.76 | 0.56 | 0.15 | 2.20045489719612e-81 | 7.41421273061262e-77 |
73 | 3 | ErPrT | Early proximal tubule | wk13 | SLC39A4 | 55630 | 17129 | 0.76 | 0.4 | 0.1 | 7.39328838880336e-60 | 2.4910945897234e-55 |
73 | 3 | ErPrT | Early proximal tubule | wk13 | TPD52L1 | 7164 | 12006 | 0.75 | 0.37 | 0.08 | 1.8902153518154e-61 | 6.3688916064068e-57 |
73 | 3 | ErPrT | Early proximal tubule | wk13 | TUBB4B | 10383 | 20771 | 0.75 | 0.93 | 0.61 | 7.088982401528e-67 | 2.38856173037084e-62 |
73 | 3 | ErPrT | Early proximal tubule | wk13 | AK4 | 205 | 363 | 0.75 | 0.34 | 0.03 | 3.41047023050084e-109 | 1.14912383946495e-104 |
73 | 3 | ErPrT | Early proximal tubule | wk13 | LINC02532 | 100422737 | 53549 | 0.75 | 0.34 | 0.02 | 1.89424238532404e-127 | 6.38246029311083e-123 |
73 | 3 | ErPrT | Early proximal tubule | wk13 | SLC44A4 | 80736 | 13941 | 0.75 | 0.37 | 0.05 | 5.32334657842966e-99 | 1.79364839613609e-94 |
73 | 3 | ErPrT | Early proximal tubule | wk13 | PPP1R16A | 84988 | 14941 | 0.74 | 0.71 | 0.32 | 2.9698001847189e-59 | 1.00064447423918e-54 |
73 | 3 | ErPrT | Early proximal tubule | wk13 | TMEM256 | 254863 | 28618 | 0.74 | 0.51 | 0.16 | 9.24700380358252e-60 | 3.1156854615791e-55 |
73 | 3 | ErPrT | Early proximal tubule | wk13 | SLC16A4 | 9122 | 10925 | 0.74 | 0.31 | 0.02 | 2.46221497262429e-106 | 8.29618712876028e-102 |
73 | 3 | ErPrT | Early proximal tubule | wk13 | BBOX1 | 8424 | 964 | 0.73 | 0.24 | 0.004 | 4.62721842850865e-145 | 1.5590949773017e-140 |
73 | 3 | ErPrT | Early proximal tubule | wk13 | DPYS | 1807 | 3013 | 0.73 | 0.31 | 0.01 | 5.6109924371096e-152 | 1.89056779175971e-147 |
73 | 3 | ErPrT | Early proximal tubule | wk13 | CYP27A1 | 1593 | 2605 | 0.73 | 0.38 | 0.08 | 1.8631678451109e-70 | 6.27775773731667e-66 |
73 | 3 | ErPrT | Early proximal tubule | wk13 | ASRGL1 | 80150 | 16448 | 0.73 | 0.47 | 0.13 | 4.82433285024083e-64 | 1.62551071056014e-59 |
73 | 3 | ErPrT | Early proximal tubule | wk13 | NIT2 | 56954 | 29878 | 0.73 | 0.5 | 0.17 | 3.96891085026835e-55 | 1.33728482188942e-50 |
73 | 3 | ErPrT | Early proximal tubule | wk13 | AKR1A1 | 10327 | 380 | 0.72 | 0.75 | 0.38 | 5.31248951661277e-56 | 1.78999021772751e-51 |
73 | 3 | ErPrT | Early proximal tubule | wk13 | HAO2 | 51179 | 4810 | 0.72 | 0.26 | 0.004 | 1.09767525522358e-156 | 3.69850700495035e-152 |
73 | 3 | ErPrT | Early proximal tubule | wk13 | SLC39A5 | 283375 | 20502 | 0.72 | 0.34 | 0.02 | 4.46445465933327e-139 | 1.50425335291575e-134 |
73 | 3 | ErPrT | Early proximal tubule | wk13 | DBI | 1622 | 2690 | 0.71 | 0.75 | 0.38 | 5.90341892910262e-54 | 1.98909797397184e-49 |
73 | 3 | ErPrT | Early proximal tubule | wk13 | CDH6 | 1004 | 1765 | 0.7 | 0.51 | 0.14 | 3.81550583167508e-67 | 1.2855965349246e-62 |
73 | 3 | ErPrT | Early proximal tubule | wk13 | VIL1 | 7429 | 12690 | 0.7 | 0.33 | 0.03 | 7.7286307558731e-97 | 2.60408484688388e-92 |
73 | 3 | ErPrT | Early proximal tubule | wk13 | BICC1 | 80114 | 19351 | 0.69 | 0.41 | 0.12 | 9.82355587270388e-54 | 3.30994891574884e-49 |
73 | 3 | ErPrT | Early proximal tubule | wk13 | RNF130 | 55819 | 18280 | 0.69 | 0.46 | 0.13 | 2.37693657627821e-61 | 8.0088501001118e-57 |
73 | 3 | ErPrT | Early proximal tubule | wk13 | USH1C | 10083 | 12597 | 0.68 | 0.35 | 0.05 | 1.47579875508181e-83 | 4.97255632537264e-79 |
73 | 3 | ErPrT | Early proximal tubule | wk13 | ND4 | 4538 | 7459 | 0.66 | 1 | 0.99 | 2.48951768751278e-105 | 8.38818089630556e-101 |
73 | 3 | ErPrT | Early proximal tubule | wk13 | FGFR3 | 2261 | 3690 | 0.66 | 0.35 | 0.07 | 9.43951217033305e-67 | 3.18054923067202e-62 |
73 | 3 | ErPrT | Early proximal tubule | wk13 | ATP6 | 4508 | 7414 | 0.65 | 1 | 0.96 | 3.94297501098057e-94 | 1.32854600019979e-89 |
73 | 3 | ErPrT | Early proximal tubule | wk13 | SLC37A4 | 2542 | 4061 | 0.65 | 0.65 | 0.31 | 1.7902014715736e-43 | 6.03190483832008e-39 |