Marker Genes
Dataset: Single-cell transcriptomics reveals gene expression dynamics of human fetal kidney development
- tissue: Kidney
- ontology: Kidney
- genotype: -
- stage: Fetal
- treatment condition: WT
- cell/nucleus: Cells
- pmid: 30789893
- subset name: wk13
- total genes: Not reported
- clustering: scran
- pseudotime: Monocle 2
- link: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE114530
Rows:100
| dataset id | cluster id | cluster name | cell type name | sample id | gene symbol | entrez geneid | species specific geneid |
avg log fc (?)
|
pct 1 | pct 2 | p value | padj |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 73 | 2 | End | Endothelial cells | wk13 | PPBP | 5473 | 9240 | 3.86 | 0.38 | 0.002 | 2.2395571816978E-161 | 7.5459639680125E-157 |
| 73 | 2 | End | Endothelial cells | wk13 | PF4 | 5196 | 8861 | 3.71 | 0.28 | 0.001 | 4.2835192974881E-159 | 1.4432889920956E-154 |
| 73 | 2 | End | Endothelial cells | wk13 | PLEK | 5341 | 9070 | 2.57 | 0.28 | 0.003 | 8.896208021021E-80 | 2.9974883306028E-75 |
| 73 | 2 | End | Endothelial cells | wk13 | IGFBP5 | 3488 | 5474 | 2.56 | 0.57 | 0.02 | 5.2463421803191E-52 | 1.7677025342367E-47 |
| 73 | 2 | End | Endothelial cells | wk13 | B2M | 567 | 914 | 2.43 | 1 | 0.56 | 9.632625488093E-16 | 3.2456168319581E-11 |
| 73 | 2 | End | Endothelial cells | wk13 | CDKN2D | 1032 | 1790 | 2.39 | 0.42 | 0.03 | 7.1195719405156E-22 | 2.3988685696373E-17 |
| 73 | 2 | End | Endothelial cells | wk13 | HLA-B | 3106 | 4932 | 2.24 | 0.9 | 0.07 | 1.5437554530331E-50 | 5.2015296234498E-46 |
| 73 | 2 | End | Endothelial cells | wk13 | CCL5 | 6352 | 10632 | 2.22 | 0.19 | 0.003 | 3.0638579439239E-38 | 1.0323362956257E-33 |
| 73 | 2 | End | Endothelial cells | wk13 | PLVAP | 83483 | 13635 | 2.21 | 0.61 | 0.03 | 9.1912890388559E-47 | 3.0969129287521E-42 |
| 73 | 2 | End | Endothelial cells | wk13 | GP9 | 2815 | 4444 | 2.17 | 0.28 | 0 | 6.1844343709654E-212 | 2.0837833169531E-207 |
| 73 | 2 | End | Endothelial cells | wk13 | EMCN | 51705 | 16041 | 2.13 | 0.52 | 0.01 | 1.2391222239768E-68 | 4.1750984214675E-64 |
| 73 | 2 | End | Endothelial cells | wk13 | RNASE1 | 6035 | 10044 | 2.13 | 0.42 | 0.001 | 4.2506850351527E-204 | 1.4322258157443E-199 |
| 73 | 2 | End | Endothelial cells | wk13 | RAMP2 | 10266 | 9844 | 2.12 | 0.57 | 0.02 | 6.424573059503E-61 | 2.1646956466689E-56 |
| 73 | 2 | End | Endothelial cells | wk13 | CAVIN2 | 8436 | 10690 | 2.06 | 0.76 | 0.03 | 2.0036206229771E-73 | 6.7509993270591E-69 |
| 73 | 2 | End | Endothelial cells | wk13 | LGALS1 | 3956 | 6561 | 2.02 | 0.57 | 0.06 | 1.1114776782558E-20 | 3.7450128891151E-16 |
| 73 | 2 | End | Endothelial cells | wk13 | RAP1B | 5908 | 9857 | 1.98 | 0.66 | 0.2 | 1.5772543806529E-9 | 5.314400910172E-5 |
| 73 | 2 | End | Endothelial cells | wk13 | HLA-C | 3107 | 4933 | 1.9 | 0.85 | 0.05 | 1.4885708504731E-53 | 5.0155906235839E-49 |
| 73 | 2 | End | Endothelial cells | wk13 | ESAM | 90952 | 17474 | 1.86 | 0.71 | 0.04 | 7.8961463869579E-48 | 2.6605275636216E-43 |
| 73 | 2 | End | Endothelial cells | wk13 | TUBA4A | 7277 | 12407 | 1.85 | 0.52 | 0.04 | 4.4579049468049E-26 | 1.5020464927764E-21 |
| 73 | 2 | End | Endothelial cells | wk13 | FERMT3 | 83706 | 23151 | 1.81 | 0.28 | 0.005 | 1.3247431625002E-55 | 4.4635896117283E-51 |
| 73 | 2 | End | Endothelial cells | wk13 | GNG11 | 2791 | 4403 | 1.73 | 0.85 | 0.26 | 2.4722443819978E-14 | 8.3299802207034E-10 |
| 73 | 2 | End | Endothelial cells | wk13 | PRCP | 5547 | 9344 | 1.68 | 0.66 | 0.23 | 1.55565327986E-8 | 0.00052416181611603 |
| 73 | 2 | End | Endothelial cells | wk13 | HLA-E | 3133 | 4962 | 1.68 | 0.76 | 0.12 | 5.2000526454263E-22 | 1.7521057383499E-17 |
| 73 | 2 | End | Endothelial cells | wk13 | ARPC1B | 10095 | 704 | 1.66 | 0.66 | 0.13 | 2.9875294091214E-15 | 1.0066181591094E-10 |
| 73 | 2 | End | Endothelial cells | wk13 | ARHGDIB | 397 | 679 | 1.64 | 0.61 | 0.02 | 3.8657857861087E-68 | 1.3025378627714E-63 |
| 73 | 2 | End | Endothelial cells | wk13 | STOM | 2040 | 3383 | 1.64 | 0.47 | 0.04 | 1.8532801545377E-20 | 6.2444421526994E-16 |
| 73 | 2 | End | Endothelial cells | wk13 | PECAM1 | 5175 | 8823 | 1.63 | 0.71 | 0.002 | 0 | 0 |
| 73 | 2 | End | Endothelial cells | wk13 | THY1 | 7070 | 11801 | 1.62 | 0.42 | 0.03 | 1.4170477718986E-23 | 4.774600762635E-19 |
| 73 | 2 | End | Endothelial cells | wk13 | ICAM2 | 3384 | 5345 | 1.62 | 0.61 | 0.004 | 2.5011491193502E-212 | 8.4273718427386E-208 |
| 73 | 2 | End | Endothelial cells | wk13 | CD69 | 969 | 1694 | 1.61 | 0.28 | 0.01 | 1.031036101942E-32 | 3.4739730418835E-28 |
| 73 | 2 | End | Endothelial cells | wk13 | ADGRL4 | 64123 | 20822 | 1.6 | 0.47 | 0.001 | 8.755535917725E-235 | 2.9500902721183E-230 |
| 73 | 2 | End | Endothelial cells | wk13 | SH3BGRL3 | 83442 | 15568 | 1.6 | 0.95 | 0.45 | 2.5911329220125E-11 | 8.7305632674289E-7 |
| 73 | 2 | End | Endothelial cells | wk13 | TIMP3 | 7078 | 11822 | 1.6 | 0.81 | 0.23 | 1.2276994239242E-13 | 4.1366104389704E-9 |
| 73 | 2 | End | Endothelial cells | wk13 | GMFG | 9535 | 4374 | 1.56 | 0.61 | 0.007 | 1.5214593283682E-156 | 5.1264050610037E-152 |
| 73 | 2 | End | Endothelial cells | wk13 | CXCL3 | 2921 | 4604 | 1.56 | 0.23 | 0.01 | 6.9719603388074E-18 | 2.3491323165578E-13 |
| 73 | 2 | End | Endothelial cells | wk13 | PDLIM1 | 9124 | 2067 | 1.55 | 0.52 | 0.15 | 2.5488406656266E-7 | 0.0085880637387621 |
| 73 | 2 | End | Endothelial cells | wk13 | PLPP3 | 8613 | 9229 | 1.55 | 0.57 | 0.2 | 9.4503292348112E-8 | 0.0031841939323773 |
| 73 | 2 | End | Endothelial cells | wk13 | CLEC1B | 51266 | 24356 | 1.5 | 0.28 | 0 | 6.1844343709654E-212 | 2.0837833169531E-207 |
| 73 | 2 | End | Endothelial cells | wk13 | CD79B | 974 | 1699 | 1.5 | 0.23 | 0.005 | 2.0169638081826E-38 | 6.7959578552905E-34 |
| 73 | 2 | End | Endothelial cells | wk13 | APOLD1 | 81575 | 25268 | 1.5 | 0.47 | 0.01 | 7.0945970430071E-49 | 2.3904535276708E-44 |
| 73 | 2 | End | Endothelial cells | wk13 | EGFL7 | 51162 | 20594 | 1.48 | 0.71 | 0.11 | 7.5322213354378E-20 | 2.5379066567624E-15 |
| 73 | 2 | End | Endothelial cells | wk13 | IGFBP3 | 3486 | 5472 | 1.46 | 0.38 | 0.02 | 5.1291278895535E-26 | 1.7282083511062E-21 |
| 73 | 2 | End | Endothelial cells | wk13 | LAPTM5 | 7805 | 29612 | 1.46 | 0.33 | 0.003 | 5.3187955716701E-96 | 1.7921149799185E-91 |
| 73 | 2 | End | Endothelial cells | wk13 | HLA-DRA | 3122 | 4947 | 1.45 | 0.19 | 0.006 | 8.9136952736439E-24 | 3.0033804855016E-19 |
| 73 | 2 | End | Endothelial cells | wk13 | HLA-A | 3105 | 4931 | 1.45 | 1 | 0.33 | 1.3925038454807E-15 | 4.6919024569627E-11 |
| 73 | 2 | End | Endothelial cells | wk13 | HSPB1 | 3315 | 5246 | 1.43 | 0.85 | 0.43 | 5.5192147199659E-9 | 0.00018596442077453 |
| 73 | 2 | End | Endothelial cells | wk13 | CCND3 | 896 | 1585 | 1.43 | 0.33 | 0.06 | 5.8676397067022E-8 | 0.0019770425227762 |
| 73 | 2 | End | Endothelial cells | wk13 | ITM2A | 9452 | 6173 | 1.43 | 0.47 | 0.02 | 4.4506606225008E-43 | 1.4996055901454E-38 |
| 73 | 2 | End | Endothelial cells | wk13 | MEG3 | 55384 | 14575 | 1.41 | 0.76 | 0.06 | 1.1501401913644E-36 | 3.8752823607833E-32 |
| 73 | 2 | End | Endothelial cells | wk13 | FXYD5 | 53827 | 4029 | 1.4 | 0.57 | 0.01 | 2.8827821645162E-78 | 9.7132462251209E-74 |
| 73 | 2 | End | Endothelial cells | wk13 | COTL1 | 23406 | 18304 | 1.4 | 0.81 | 0.32 | 2.9049361060576E-9 | 9.7878917157504E-5 |
| 73 | 2 | End | Endothelial cells | wk13 | PFN1 | 5216 | 8881 | 1.4 | 0.95 | 0.72 | 1.6899782596753E-11 | 5.69421274815E-7 |
| 73 | 2 | End | Endothelial cells | wk13 | APLNR | 187 | 339 | 1.39 | 0.47 | 0.003 | 4.476734076744E-185 | 1.5083907798181E-180 |
| 73 | 2 | End | Endothelial cells | wk13 | SRGN | 5552 | 9361 | 1.39 | 0.28 | 0.004 | 2.4913809420841E-70 | 8.394458946258E-66 |
| 73 | 2 | End | Endothelial cells | wk13 | RGS18 | 64407 | 14261 | 1.38 | 0.28 | 0 | 6.1844343709654E-212 | 2.0837833169531E-207 |
| 73 | 2 | End | Endothelial cells | wk13 | FLT1 | 2321 | 3763 | 1.37 | 0.38 | 0.006 | 2.1897455078691E-80 | 7.3781285142142E-76 |
| 73 | 2 | End | Endothelial cells | wk13 | RSU1 | 6251 | 10464 | 1.37 | 0.52 | 0.11 | 3.6579611113416E-11 | 1.2325134168554E-6 |
| 73 | 2 | End | Endothelial cells | wk13 | GP1BA | 2811 | 4439 | 1.34 | 0.23 | 0 | 6.6389862078163E-177 | 2.2369400128616E-172 |
| 73 | 2 | End | Endothelial cells | wk13 | GIMAP7 | 168537 | 22404 | 1.34 | 0.38 | 0.003 | 1.2153573167204E-118 | 4.0950249429578E-114 |
| 73 | 2 | End | Endothelial cells | wk13 | CD34 | 947 | 1662 | 1.34 | 0.42 | 0.004 | 5.4002750687287E-136 | 1.8195686816575E-131 |
| 73 | 2 | End | Endothelial cells | wk13 | CLIC1 | 1192 | 2062 | 1.34 | 0.9 | 0.57 | 1.0522401264916E-8 | 0.00035454178822007 |
| 73 | 2 | End | Endothelial cells | wk13 | TPM4 | 7171 | 12013 | 1.33 | 0.81 | 0.2 | 2.6056381299547E-14 | 8.7794371150693E-10 |
| 73 | 2 | End | Endothelial cells | wk13 | RHOC | 389 | 669 | 1.33 | 0.76 | 0.27 | 2.0765025868663E-9 | 6.9965678161873E-5 |
| 73 | 2 | End | Endothelial cells | wk13 | ITGA2B | 3674 | 6138 | 1.32 | 0.28 | 0.007 | 1.0713171822474E-42 | 3.6096961138645E-38 |
| 73 | 2 | End | Endothelial cells | wk13 | ECSCR | 641700 | 35454 | 1.32 | 0.28 | 0.002 | 7.6385952578188E-98 | 2.5737482861695E-93 |
| 73 | 2 | End | Endothelial cells | wk13 | FN1 | 2335 | 3778 | 1.3 | 0.38 | 0.06 | 2.2207982304455E-10 | 7.4827575576629E-6 |
| 73 | 2 | End | Endothelial cells | wk13 | TSPAN13 | 27075 | 21643 | 1.29 | 0.61 | 0.07 | 2.8220436524377E-22 | 9.5085938825237E-18 |
| 73 | 2 | End | Endothelial cells | wk13 | CD9 | 928 | 1709 | 1.29 | 0.76 | 0.35 | 3.3185888752603E-7 | 0.01 |
| 73 | 2 | End | Endothelial cells | wk13 | GIMAP4 | 55303 | 21872 | 1.27 | 0.38 | 0.002 | 4.5490370664259E-161 | 1.5327525491616E-156 |
| 73 | 2 | End | Endothelial cells | wk13 | SERPINB6 | 5269 | 8950 | 1.27 | 0.57 | 0.08 | 2.2977390907001E-15 | 7.7420020922049E-11 |
| 73 | 2 | End | Endothelial cells | wk13 | SPTBN1 | 6711 | 11275 | 1.27 | 0.71 | 0.19 | 2.9035163793877E-10 | 9.783108088709E-6 |
| 73 | 2 | End | Endothelial cells | wk13 | VAMP5 | 10791 | 12646 | 1.26 | 0.66 | 0.25 | 5.9816524330373E-7 | 0.02 |
| 73 | 2 | End | Endothelial cells | wk13 | HHEX | 3087 | 4901 | 1.25 | 0.23 | 0.004 | 1.8431291023216E-44 | 6.2102391973623E-40 |
| 73 | 2 | End | Endothelial cells | wk13 | UBE2C | 11065 | 15937 | 1.25 | 0.42 | 0.09 | 3.1605868891271E-8 | 0.0010649281464225 |
| 73 | 2 | End | Endothelial cells | wk13 | TUBB1 | 81027 | 16257 | 1.24 | 0.33 | 0.001 | 5.3495949820197E-173 | 1.8024925332417E-168 |
| 73 | 2 | End | Endothelial cells | wk13 | SNX3 | 8724 | 11174 | 1.24 | 0.95 | 0.64 | 1.7311042830177E-7 | 0.0058327827711998 |
| 73 | 2 | End | Endothelial cells | wk13 | LDB2 | 9079 | 6533 | 1.23 | 0.38 | 0.02 | 2.6945609085781E-23 | 9.0790535253629E-19 |
| 73 | 2 | End | Endothelial cells | wk13 | CAVIN3 | 112464 | 9400 | 1.22 | 0.38 | 0.06 | 1.2452222137164E-9 | 4.1956517268961E-5 |
| 73 | 2 | End | Endothelial cells | wk13 | SSUH2 | 51066 | 24809 | 1.22 | 0.28 | 0 | 6.1844343709654E-212 | 2.0837833169531E-207 |
| 73 | 2 | End | Endothelial cells | wk13 | SLC2A3 | 6515 | 11007 | 1.21 | 0.52 | 0.03 | 5.9467408785542E-34 | 2.00369487162E-29 |
| 73 | 2 | End | Endothelial cells | wk13 | LAT | 27040 | 18874 | 1.21 | 0.28 | 0.008 | 1.5271090459935E-37 | 5.1454412195705E-33 |
| 73 | 2 | End | Endothelial cells | wk13 | MEF2C | 4208 | 6996 | 1.2 | 0.47 | 0.02 | 2.2491911139531E-43 | 7.5784245393536E-39 |
| 73 | 2 | End | Endothelial cells | wk13 | MYL12A | 10627 | 16701 | 1.19 | 1 | 0.69 | 1.1113436664708E-10 | 3.7445613498067E-6 |
| 73 | 2 | End | Endothelial cells | wk13 | UBE2J1 | 51465 | 17598 | 1.18 | 0.71 | 0.18 | 1.4324563405513E-11 | 4.8265183938534E-7 |
| 73 | 2 | End | Endothelial cells | wk13 | HLX | 3142 | 4978 | 1.18 | 0.28 | 0.002 | 3.4610341449614E-106 | 1.1661608448033E-101 |
| 73 | 2 | End | Endothelial cells | wk13 | CALM1 | 801 | 1442 | 1.18 | 0.9 | 0.58 | 7.0392902509323E-9 | 0.00023718184571491 |
| 73 | 2 | End | Endothelial cells | wk13 | RASGRP3 | 25780 | 14545 | 1.17 | 0.52 | 0.01 | 1.4188503282702E-60 | 4.7806742960736E-56 |
| 73 | 2 | End | Endothelial cells | wk13 | EHD3 | 30845 | 3244 | 1.17 | 0.47 | 0.006 | 1.2762209460854E-112 | 4.3000988557401E-108 |
| 73 | 2 | End | Endothelial cells | wk13 | BIN2 | 51411 | 1053 | 1.17 | 0.28 | 0.001 | 3.8284041102707E-127 | 1.2899424809146E-122 |
| 73 | 2 | End | Endothelial cells | wk13 | ENG | 2022 | 3349 | 1.16 | 0.38 | 0.01 | 2.7240747758717E-37 | 9.1784975498221E-33 |
| 73 | 2 | End | Endothelial cells | wk13 | RGCC | 28984 | 20369 | 1.16 | 0.47 | 0.01 | 2.3115892349589E-47 | 7.7886687682705E-43 |
| 73 | 2 | End | Endothelial cells | wk13 | SOX17 | 64321 | 18122 | 1.16 | 0.42 | 0.001 | 7.671159040482E-238 | 2.5847203271E-233 |
| 73 | 2 | End | Endothelial cells | wk13 | TYMS | 7298 | 12441 | 1.15 | 0.52 | 0.14 | 9.4965968433782E-8 | 0.0031997833404079 |
| 73 | 2 | End | Endothelial cells | wk13 | HBEGF | 1839 | 3059 | 1.15 | 0.38 | 0.08 | 2.0845428331087E-7 | 0.0070236586218766 |
| 73 | 2 | End | Endothelial cells | wk13 | INKA1 | 389119 | 32480 | 1.14 | 0.57 | 0.003 | 5.4487011691519E-220 | 1.835885371934E-215 |
| 73 | 2 | End | Endothelial cells | wk13 | CKLF | 51192 | 13253 | 1.13 | 0.57 | 0.12 | 2.2732611212918E-11 | 7.6595260220807E-7 |
| 73 | 2 | End | Endothelial cells | wk13 | MPIG6B | 80739 | 13937 | 1.12 | 0.14 | 0 | 7.1362258406295E-107 | 2.4044799347417E-102 |
| 73 | 2 | End | Endothelial cells | wk13 | RAMP3 | 10268 | 9845 | 1.11 | 0.23 | 0.004 | 3.1934321588902E-49 | 1.0759950316165E-44 |
| 73 | 2 | End | Endothelial cells | wk13 | ACTB | 60 | 132 | 1.1 | 1 | 0.93 | 2.2044171557941E-7 | 0.0074275631647325 |
| 73 | 2 | End | Endothelial cells | wk13 | NRGN | 4900 | 8000 | 1.09 | 0.33 | 0.02 | 6.0600773931301E-18 | 2.0418824768413E-13 |