Marker Genes
Dataset: Single-cell transcriptomics reveals gene expression dynamics of human fetal kidney development
- tissue: Kidney
- ontology: Kidney
- genotype: -
- stage: Fetal
- treatment condition: WT
- cell/nucleus: Cells
- pmid: 30789893
- subset name: wk13
- total genes: Not reported
- clustering: scran
- pseudotime: Monocle 2
- link: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE114530
Rows:100
dataset id | cluster id | cluster name | cell type name | sample id | gene symbol | entrez geneid | species specific geneid |
avg log fc (?)
|
pct 1 | pct 2 | p value | padj |
---|---|---|---|---|---|---|---|---|---|---|---|---|
73 | 2 | End | Endothelial cells | wk13 | PPBP | 5473 | 9240 | 3.86 | 0.38 | 0.002 | 2.23955718169779e-161 | 7.54596396801254e-157 |
73 | 2 | End | Endothelial cells | wk13 | PF4 | 5196 | 8861 | 3.71 | 0.28 | 0.001 | 4.28351929748807e-159 | 1.44328899209563e-154 |
73 | 2 | End | Endothelial cells | wk13 | PLEK | 5341 | 9070 | 2.57 | 0.28 | 0.003 | 8.896208021021e-80 | 2.99748833060281e-75 |
73 | 2 | End | Endothelial cells | wk13 | IGFBP5 | 3488 | 5474 | 2.56 | 0.57 | 0.02 | 5.2463421803191e-52 | 1.76770253423672e-47 |
73 | 2 | End | Endothelial cells | wk13 | B2M | 567 | 914 | 2.43 | 1 | 0.56 | 9.63262548809304e-16 | 3.24561683195807e-11 |
73 | 2 | End | Endothelial cells | wk13 | CDKN2D | 1032 | 1790 | 2.39 | 0.42 | 0.03 | 7.11957194051563e-22 | 2.39886856963733e-17 |
73 | 2 | End | Endothelial cells | wk13 | HLA-B | 3106 | 4932 | 2.24 | 0.9 | 0.07 | 1.54375545303311e-50 | 5.20152962344975e-46 |
73 | 2 | End | Endothelial cells | wk13 | CCL5 | 6352 | 10632 | 2.22 | 0.19 | 0.003 | 3.06385794392394e-38 | 1.03233629562573e-33 |
73 | 2 | End | Endothelial cells | wk13 | PLVAP | 83483 | 13635 | 2.21 | 0.61 | 0.03 | 9.19128903885585e-47 | 3.09691292875209e-42 |
73 | 2 | End | Endothelial cells | wk13 | GP9 | 2815 | 4444 | 2.17 | 0.28 | 0 | 6.18443437096543e-212 | 2.08378331695309e-207 |
73 | 2 | End | Endothelial cells | wk13 | EMCN | 51705 | 16041 | 2.13 | 0.52 | 0.01 | 1.23912222397683e-68 | 4.17509842146754e-64 |
73 | 2 | End | Endothelial cells | wk13 | RNASE1 | 6035 | 10044 | 2.13 | 0.42 | 0.001 | 4.2506850351527e-204 | 1.43222581574435e-199 |
73 | 2 | End | Endothelial cells | wk13 | RAMP2 | 10266 | 9844 | 2.12 | 0.57 | 0.02 | 6.42457305950302e-61 | 2.16469564666895e-56 |
73 | 2 | End | Endothelial cells | wk13 | CAVIN2 | 8436 | 10690 | 2.06 | 0.76 | 0.03 | 2.00362062297711e-73 | 6.75099932705906e-69 |
73 | 2 | End | Endothelial cells | wk13 | LGALS1 | 3956 | 6561 | 2.02 | 0.57 | 0.06 | 1.11147767825581e-20 | 3.74501288911511e-16 |
73 | 2 | End | Endothelial cells | wk13 | RAP1B | 5908 | 9857 | 1.98 | 0.66 | 0.2 | 1.57725438065293e-09 | 5.31440091017197e-05 |
73 | 2 | End | Endothelial cells | wk13 | HLA-C | 3107 | 4933 | 1.9 | 0.85 | 0.05 | 1.48857085047305e-53 | 5.0155906235839e-49 |
73 | 2 | End | Endothelial cells | wk13 | ESAM | 90952 | 17474 | 1.86 | 0.71 | 0.04 | 7.89614638695786e-48 | 2.66052756362158e-43 |
73 | 2 | End | Endothelial cells | wk13 | TUBA4A | 7277 | 12407 | 1.85 | 0.52 | 0.04 | 4.45790494680492e-26 | 1.50204649277645e-21 |
73 | 2 | End | Endothelial cells | wk13 | FERMT3 | 83706 | 23151 | 1.81 | 0.28 | 0.005 | 1.32474316250023e-55 | 4.46358961172828e-51 |
73 | 2 | End | Endothelial cells | wk13 | GNG11 | 2791 | 4403 | 1.73 | 0.85 | 0.26 | 2.47224438199781e-14 | 8.32998022070341e-10 |
73 | 2 | End | Endothelial cells | wk13 | PRCP | 5547 | 9344 | 1.68 | 0.66 | 0.23 | 1.55565327986e-08 | 0.00052416181611603 |
73 | 2 | End | Endothelial cells | wk13 | HLA-E | 3133 | 4962 | 1.68 | 0.76 | 0.12 | 5.20005264542629e-22 | 1.75210573834993e-17 |
73 | 2 | End | Endothelial cells | wk13 | ARPC1B | 10095 | 704 | 1.66 | 0.66 | 0.13 | 2.98752940912144e-15 | 1.00661815910938e-10 |
73 | 2 | End | Endothelial cells | wk13 | ARHGDIB | 397 | 679 | 1.64 | 0.61 | 0.02 | 3.86578578610865e-68 | 1.30253786277145e-63 |
73 | 2 | End | Endothelial cells | wk13 | STOM | 2040 | 3383 | 1.64 | 0.47 | 0.04 | 1.85328015453772e-20 | 6.24444215269938e-16 |
73 | 2 | End | Endothelial cells | wk13 | PECAM1 | 5175 | 8823 | 1.63 | 0.71 | 0.002 | 0 | 0 |
73 | 2 | End | Endothelial cells | wk13 | THY1 | 7070 | 11801 | 1.62 | 0.42 | 0.03 | 1.41704777189856e-23 | 4.774600762635e-19 |
73 | 2 | End | Endothelial cells | wk13 | ICAM2 | 3384 | 5345 | 1.62 | 0.61 | 0.004 | 2.50114911935021e-212 | 8.4273718427386e-208 |
73 | 2 | End | Endothelial cells | wk13 | CD69 | 969 | 1694 | 1.61 | 0.28 | 0.01 | 1.03103610194204e-32 | 3.4739730418835e-28 |
73 | 2 | End | Endothelial cells | wk13 | ADGRL4 | 64123 | 20822 | 1.6 | 0.47 | 0.001 | 8.75553591772502e-235 | 2.95009027211827e-230 |
73 | 2 | End | Endothelial cells | wk13 | SH3BGRL3 | 83442 | 15568 | 1.6 | 0.95 | 0.45 | 2.59113292201248e-11 | 8.73056326742886e-07 |
73 | 2 | End | Endothelial cells | wk13 | TIMP3 | 7078 | 11822 | 1.6 | 0.81 | 0.23 | 1.22769942392425e-13 | 4.13661043897036e-09 |
73 | 2 | End | Endothelial cells | wk13 | GMFG | 9535 | 4374 | 1.56 | 0.61 | 0.007 | 1.52145932836816e-156 | 5.12640506100367e-152 |
73 | 2 | End | Endothelial cells | wk13 | CXCL3 | 2921 | 4604 | 1.56 | 0.23 | 0.01 | 6.97196033880738e-18 | 2.34913231655776e-13 |
73 | 2 | End | Endothelial cells | wk13 | PDLIM1 | 9124 | 2067 | 1.55 | 0.52 | 0.15 | 2.54884066562655e-07 | 0.00858806373876211 |
73 | 2 | End | Endothelial cells | wk13 | PLPP3 | 8613 | 9229 | 1.55 | 0.57 | 0.2 | 9.45032923481122e-08 | 0.00318419393237729 |
73 | 2 | End | Endothelial cells | wk13 | CLEC1B | 51266 | 24356 | 1.5 | 0.28 | 0 | 6.18443437096543e-212 | 2.08378331695309e-207 |
73 | 2 | End | Endothelial cells | wk13 | CD79B | 974 | 1699 | 1.5 | 0.23 | 0.005 | 2.01696380818261e-38 | 6.79595785529049e-34 |
73 | 2 | End | Endothelial cells | wk13 | APOLD1 | 81575 | 25268 | 1.5 | 0.47 | 0.01 | 7.09459704300713e-49 | 2.39045352767082e-44 |
73 | 2 | End | Endothelial cells | wk13 | EGFL7 | 51162 | 20594 | 1.48 | 0.71 | 0.11 | 7.5322213354378e-20 | 2.53790665676241e-15 |
73 | 2 | End | Endothelial cells | wk13 | IGFBP3 | 3486 | 5472 | 1.46 | 0.38 | 0.02 | 5.12912788955347e-26 | 1.72820835110615e-21 |
73 | 2 | End | Endothelial cells | wk13 | LAPTM5 | 7805 | 29612 | 1.46 | 0.33 | 0.003 | 5.31879557167015e-96 | 1.79211497991854e-91 |
73 | 2 | End | Endothelial cells | wk13 | HLA-DRA | 3122 | 4947 | 1.45 | 0.19 | 0.006 | 8.91369527364387e-24 | 3.00338048550157e-19 |
73 | 2 | End | Endothelial cells | wk13 | HLA-A | 3105 | 4931 | 1.45 | 1 | 0.33 | 1.39250384548071e-15 | 4.69190245696272e-11 |
73 | 2 | End | Endothelial cells | wk13 | HSPB1 | 3315 | 5246 | 1.43 | 0.85 | 0.43 | 5.5192147199659e-09 | 0.000185964420774531 |
73 | 2 | End | Endothelial cells | wk13 | CCND3 | 896 | 1585 | 1.43 | 0.33 | 0.06 | 5.86763970670223e-08 | 0.00197704252277625 |
73 | 2 | End | Endothelial cells | wk13 | ITM2A | 9452 | 6173 | 1.43 | 0.47 | 0.02 | 4.45066062250077e-43 | 1.49960559014541e-38 |
73 | 2 | End | Endothelial cells | wk13 | MEG3 | 55384 | 14575 | 1.41 | 0.76 | 0.06 | 1.15014019136443e-36 | 3.87528236078333e-32 |
73 | 2 | End | Endothelial cells | wk13 | FXYD5 | 53827 | 4029 | 1.4 | 0.57 | 0.01 | 2.8827821645162e-78 | 9.71324622512088e-74 |
73 | 2 | End | Endothelial cells | wk13 | COTL1 | 23406 | 18304 | 1.4 | 0.81 | 0.32 | 2.90493610605759e-09 | 9.78789171575045e-05 |
73 | 2 | End | Endothelial cells | wk13 | PFN1 | 5216 | 8881 | 1.4 | 0.95 | 0.72 | 1.6899782596753e-11 | 5.69421274814996e-07 |
73 | 2 | End | Endothelial cells | wk13 | APLNR | 187 | 339 | 1.39 | 0.47 | 0.003 | 4.476734076744e-185 | 1.50839077981812e-180 |
73 | 2 | End | Endothelial cells | wk13 | SRGN | 5552 | 9361 | 1.39 | 0.28 | 0.004 | 2.49138094208405e-70 | 8.39445894625799e-66 |
73 | 2 | End | Endothelial cells | wk13 | RGS18 | 64407 | 14261 | 1.38 | 0.28 | 0 | 6.18443437096543e-212 | 2.08378331695309e-207 |
73 | 2 | End | Endothelial cells | wk13 | FLT1 | 2321 | 3763 | 1.37 | 0.38 | 0.006 | 2.18974550786912e-80 | 7.37812851421422e-76 |
73 | 2 | End | Endothelial cells | wk13 | RSU1 | 6251 | 10464 | 1.37 | 0.52 | 0.11 | 3.65796111134161e-11 | 1.23251341685544e-06 |
73 | 2 | End | Endothelial cells | wk13 | GP1BA | 2811 | 4439 | 1.34 | 0.23 | 0 | 6.63898620781632e-177 | 2.23694001286163e-172 |
73 | 2 | End | Endothelial cells | wk13 | GIMAP7 | 168537 | 22404 | 1.34 | 0.38 | 0.003 | 1.21535731672044e-118 | 4.09502494295784e-114 |
73 | 2 | End | Endothelial cells | wk13 | CD34 | 947 | 1662 | 1.34 | 0.42 | 0.004 | 5.40027506872871e-136 | 1.81956868165745e-131 |
73 | 2 | End | Endothelial cells | wk13 | CLIC1 | 1192 | 2062 | 1.34 | 0.9 | 0.57 | 1.05224012649157e-08 | 0.000354541788220071 |
73 | 2 | End | Endothelial cells | wk13 | TPM4 | 7171 | 12013 | 1.33 | 0.81 | 0.2 | 2.60563812995468e-14 | 8.7794371150693e-10 |
73 | 2 | End | Endothelial cells | wk13 | RHOC | 389 | 669 | 1.33 | 0.76 | 0.27 | 2.0765025868663e-09 | 6.99656781618732e-05 |
73 | 2 | End | Endothelial cells | wk13 | ITGA2B | 3674 | 6138 | 1.32 | 0.28 | 0.007 | 1.07131718224742e-42 | 3.60969611386446e-38 |
73 | 2 | End | Endothelial cells | wk13 | ECSCR | 641700 | 35454 | 1.32 | 0.28 | 0.002 | 7.63859525781875e-98 | 2.57374828616945e-93 |
73 | 2 | End | Endothelial cells | wk13 | FN1 | 2335 | 3778 | 1.3 | 0.38 | 0.06 | 2.22079823044546e-10 | 7.48275755766294e-06 |
73 | 2 | End | Endothelial cells | wk13 | TSPAN13 | 27075 | 21643 | 1.29 | 0.61 | 0.07 | 2.82204365243773e-22 | 9.5085938825237e-18 |
73 | 2 | End | Endothelial cells | wk13 | CD9 | 928 | 1709 | 1.29 | 0.76 | 0.35 | 3.31858887526031e-07 | 0.01 |
73 | 2 | End | Endothelial cells | wk13 | GIMAP4 | 55303 | 21872 | 1.27 | 0.38 | 0.002 | 4.54903706642591e-161 | 1.53275254916155e-156 |
73 | 2 | End | Endothelial cells | wk13 | SERPINB6 | 5269 | 8950 | 1.27 | 0.57 | 0.08 | 2.29773909070008e-15 | 7.74200209220487e-11 |
73 | 2 | End | Endothelial cells | wk13 | SPTBN1 | 6711 | 11275 | 1.27 | 0.71 | 0.19 | 2.90351637938772e-10 | 9.78310808870899e-06 |
73 | 2 | End | Endothelial cells | wk13 | VAMP5 | 10791 | 12646 | 1.26 | 0.66 | 0.25 | 5.98165243303726e-07 | 0.02 |
73 | 2 | End | Endothelial cells | wk13 | HHEX | 3087 | 4901 | 1.25 | 0.23 | 0.004 | 1.84312910232157e-44 | 6.21023919736228e-40 |
73 | 2 | End | Endothelial cells | wk13 | UBE2C | 11065 | 15937 | 1.25 | 0.42 | 0.09 | 3.16058688912713e-08 | 0.00106492814642249 |
73 | 2 | End | Endothelial cells | wk13 | TUBB1 | 81027 | 16257 | 1.24 | 0.33 | 0.001 | 5.34959498201968e-173 | 1.80249253324171e-168 |
73 | 2 | End | Endothelial cells | wk13 | SNX3 | 8724 | 11174 | 1.24 | 0.95 | 0.64 | 1.73110428301768e-07 | 0.00583278277119976 |
73 | 2 | End | Endothelial cells | wk13 | LDB2 | 9079 | 6533 | 1.23 | 0.38 | 0.02 | 2.69456090857805e-23 | 9.07905352536289e-19 |
73 | 2 | End | Endothelial cells | wk13 | CAVIN3 | 112464 | 9400 | 1.22 | 0.38 | 0.06 | 1.24522221371642e-09 | 4.19565172689612e-05 |
73 | 2 | End | Endothelial cells | wk13 | SSUH2 | 51066 | 24809 | 1.22 | 0.28 | 0 | 6.18443437096543e-212 | 2.08378331695309e-207 |
73 | 2 | End | Endothelial cells | wk13 | SLC2A3 | 6515 | 11007 | 1.21 | 0.52 | 0.03 | 5.94674087855417e-34 | 2.00369487162004e-29 |
73 | 2 | End | Endothelial cells | wk13 | LAT | 27040 | 18874 | 1.21 | 0.28 | 0.008 | 1.52710904599349e-37 | 5.14544121957047e-33 |
73 | 2 | End | Endothelial cells | wk13 | MEF2C | 4208 | 6996 | 1.2 | 0.47 | 0.02 | 2.2491911139531e-43 | 7.57842453935357e-39 |
73 | 2 | End | Endothelial cells | wk13 | MYL12A | 10627 | 16701 | 1.19 | 1 | 0.69 | 1.11134366647078e-10 | 3.74456134980666e-06 |
73 | 2 | End | Endothelial cells | wk13 | UBE2J1 | 51465 | 17598 | 1.18 | 0.71 | 0.18 | 1.43245634055126e-11 | 4.82651839385342e-07 |
73 | 2 | End | Endothelial cells | wk13 | HLX | 3142 | 4978 | 1.18 | 0.28 | 0.002 | 3.46103414496136e-106 | 1.16616084480328e-101 |
73 | 2 | End | Endothelial cells | wk13 | CALM1 | 801 | 1442 | 1.18 | 0.9 | 0.58 | 7.03929025093233e-09 | 0.000237181845714914 |
73 | 2 | End | Endothelial cells | wk13 | RASGRP3 | 25780 | 14545 | 1.17 | 0.52 | 0.01 | 1.41885032827019e-60 | 4.78067429607359e-56 |
73 | 2 | End | Endothelial cells | wk13 | EHD3 | 30845 | 3244 | 1.17 | 0.47 | 0.006 | 1.27622094608537e-112 | 4.30009885574006e-108 |
73 | 2 | End | Endothelial cells | wk13 | BIN2 | 51411 | 1053 | 1.17 | 0.28 | 0.001 | 3.82840411027074e-127 | 1.28994248091462e-122 |
73 | 2 | End | Endothelial cells | wk13 | ENG | 2022 | 3349 | 1.16 | 0.38 | 0.01 | 2.7240747758717e-37 | 9.17849754982212e-33 |
73 | 2 | End | Endothelial cells | wk13 | RGCC | 28984 | 20369 | 1.16 | 0.47 | 0.01 | 2.31158923495888e-47 | 7.78866876827046e-43 |
73 | 2 | End | Endothelial cells | wk13 | SOX17 | 64321 | 18122 | 1.16 | 0.42 | 0.001 | 7.67115904048199e-238 | 2.5847203271e-233 |
73 | 2 | End | Endothelial cells | wk13 | TYMS | 7298 | 12441 | 1.15 | 0.52 | 0.14 | 9.49659684337822e-08 | 0.00319978334040786 |
73 | 2 | End | Endothelial cells | wk13 | HBEGF | 1839 | 3059 | 1.15 | 0.38 | 0.08 | 2.08454283310874e-07 | 0.0070236586218766 |
73 | 2 | End | Endothelial cells | wk13 | INKA1 | 389119 | 32480 | 1.14 | 0.57 | 0.003 | 5.44870116915185e-220 | 1.83588537193403e-215 |
73 | 2 | End | Endothelial cells | wk13 | CKLF | 51192 | 13253 | 1.13 | 0.57 | 0.12 | 2.27326112129182e-11 | 7.65952602208067e-07 |
73 | 2 | End | Endothelial cells | wk13 | MPIG6B | 80739 | 13937 | 1.12 | 0.14 | 0 | 7.13622584062946e-107 | 2.40447993474169e-102 |
73 | 2 | End | Endothelial cells | wk13 | RAMP3 | 10268 | 9845 | 1.11 | 0.23 | 0.004 | 3.19343215889016e-49 | 1.07599503161645e-44 |
73 | 2 | End | Endothelial cells | wk13 | ACTB | 60 | 132 | 1.1 | 1 | 0.93 | 2.20441715579405e-07 | 0.00742756316473247 |
73 | 2 | End | Endothelial cells | wk13 | NRGN | 4900 | 8000 | 1.09 | 0.33 | 0.02 | 6.06007739313011e-18 | 2.04188247684126e-13 |