Marker Genes
Dataset: Single-cell transcriptomics reveals gene expression dynamics of human fetal kidney development
- tissue: Kidney
- ontology: Kidney
- genotype: -
- stage: Fetal
- treatment condition: WT
- cell/nucleus: Cells
- pmid: 30789893
- subset name: wk13
- total genes: Not reported
- clustering: scran
- pseudotime: Monocle 2
- link: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE114530
Rows:100
dataset id | cluster id | cluster name | cell type name | sample id | gene symbol | entrez geneid | species specific geneid |
avg log fc (?)
|
pct 1 | pct 2 | p value | padj |
---|---|---|---|---|---|---|---|---|---|---|---|---|
73 | 18 | SSBm/d | S-shaped body medial/distal | wk13 | MAL | 4118 | 6817 | 1.25 | 0.59 | 0.1 | 2.27944664467237e-140 | 7.68036752455909e-136 |
73 | 18 | SSBm/d | S-shaped body medial/distal | wk13 | CD24 | 100133941 | 1645 | 1.24 | 0.99 | 0.5 | 6.11354512223175e-156 | 2.05989789348476e-151 |
73 | 18 | SSBm/d | S-shaped body medial/distal | wk13 | ELF3 | 1999 | 3318 | 1.23 | 0.7 | 0.15 | 3.06196229403487e-153 | 1.03169757535211e-148 |
73 | 18 | SSBm/d | S-shaped body medial/distal | wk13 | LIMCH1 | 22998 | 29191 | 1.14 | 0.69 | 0.11 | 3.7157677676019e-166 | 1.25199079161578e-161 |
73 | 18 | SSBm/d | S-shaped body medial/distal | wk13 | LINC02381 | 400043 | 53304 | 1.14 | 0.58 | 0.1 | 8.59798134213217e-143 | 2.89700383341801e-138 |
73 | 18 | SSBm/d | S-shaped body medial/distal | wk13 | MECOM | 2122 | 3498 | 1.06 | 0.51 | 0.06 | 8.78735135099556e-152 | 2.96081016420444e-147 |
73 | 18 | SSBm/d | S-shaped body medial/distal | wk13 | CLDN4 | 1364 | 2046 | 1.05 | 0.62 | 0.09 | 1.07965460428657e-164 | 3.63778822368316e-160 |
73 | 18 | SSBm/d | S-shaped body medial/distal | wk13 | CLDN10 | 9071 | 2033 | 1.04 | 0.5 | 0.1 | 2.5429787717194e-99 | 8.56831267343134e-95 |
73 | 18 | SSBm/d | S-shaped body medial/distal | wk13 | CEBPD | 1052 | 1835 | 1 | 0.75 | 0.3 | 1.39112360990158e-85 | 4.6872518912024e-81 |
73 | 18 | SSBm/d | S-shaped body medial/distal | wk13 | DNER | 92737 | 24456 | 0.98 | 0.5 | 0.06 | 1.10163023413358e-149 | 3.71183291088969e-145 |
73 | 18 | SSBm/d | S-shaped body medial/distal | wk13 | TUBB2B | 347733 | 30829 | 0.97 | 0.78 | 0.27 | 5.27685838784878e-97 | 1.77798466520177e-92 |
73 | 18 | SSBm/d | S-shaped body medial/distal | wk13 | EGR1 | 1958 | 3238 | 0.95 | 0.78 | 0.35 | 8.80282212279837e-80 | 2.96602288605568e-75 |
73 | 18 | SSBm/d | S-shaped body medial/distal | wk13 | ADAMTS1 | 9510 | 217 | 0.91 | 0.66 | 0.26 | 3.58005922082856e-67 | 1.20626515386597e-62 |
73 | 18 | SSBm/d | S-shaped body medial/distal | wk13 | WFDC2 | 10406 | 15939 | 0.91 | 0.52 | 0.12 | 1.00945294578693e-90 | 3.40125075553448e-86 |
73 | 18 | SSBm/d | S-shaped body medial/distal | wk13 | TCIM | 56892 | 1357 | 0.9 | 0.54 | 0.12 | 1.36790873882713e-95 | 4.60903170460412e-91 |
73 | 18 | SSBm/d | S-shaped body medial/distal | wk13 | FOS | 2353 | 3796 | 0.88 | 0.97 | 0.64 | 2.54392621879388e-85 | 8.5715050016041e-81 |
73 | 18 | SSBm/d | S-shaped body medial/distal | wk13 | HES1 | 3280 | 5192 | 0.86 | 0.99 | 0.79 | 1.91613051894744e-83 | 6.45621017054149e-79 |
73 | 18 | SSBm/d | S-shaped body medial/distal | wk13 | DKK1 | 22943 | 2891 | 0.85 | 0.35 | 0.06 | 7.22910566142482e-69 | 2.43577486156048e-64 |
73 | 18 | SSBm/d | S-shaped body medial/distal | wk13 | OVOL1 | 5017 | 8525 | 0.83 | 0.47 | 0.07 | 4.04698162286483e-116 | 1.36358998800808e-111 |
73 | 18 | SSBm/d | S-shaped body medial/distal | wk13 | PAPPA2 | 60676 | 14615 | 0.8 | 0.23 | 0.03 | 1.08855502356676e-59 | 3.66777729640584e-55 |
73 | 18 | SSBm/d | S-shaped body medial/distal | wk13 | MITF | 4286 | 7105 | 0.79 | 0.51 | 0.12 | 1.78139408249209e-83 | 6.00222922154885e-79 |
73 | 18 | SSBm/d | S-shaped body medial/distal | wk13 | SOCS3 | 9021 | 19391 | 0.79 | 0.44 | 0.16 | 1.71629726196651e-44 | 5.78289199446994e-40 |
73 | 18 | SSBm/d | S-shaped body medial/distal | wk13 | RIPK4 | 54101 | 496 | 0.77 | 0.44 | 0.1 | 1.85245325343597e-79 | 6.24165599212714e-75 |
73 | 18 | SSBm/d | S-shaped body medial/distal | wk13 | SOSTDC1 | 25928 | 21748 | 0.76 | 0.46 | 0.11 | 1.60328666121487e-77 | 5.40211407629738e-73 |
73 | 18 | SSBm/d | S-shaped body medial/distal | wk13 | KLF5 | 688 | 6349 | 0.76 | 0.42 | 0.07 | 2.23038053936473e-90 | 7.51504418933551e-86 |
73 | 18 | SSBm/d | S-shaped body medial/distal | wk13 | AKIRIN1 | 79647 | 25744 | 0.72 | 0.73 | 0.35 | 3.24024860329084e-60 | 1.09176936439281e-55 |
73 | 18 | SSBm/d | S-shaped body medial/distal | wk13 | CCN1 | 3491 | 2654 | 0.72 | 0.84 | 0.49 | 1.0745129705337e-52 | 3.62046400291625e-48 |
73 | 18 | SSBm/d | S-shaped body medial/distal | wk13 | TSPAN15 | 23555 | 23298 | 0.72 | 0.42 | 0.08 | 4.47099511090252e-84 | 1.5064570926675e-79 |
73 | 18 | SSBm/d | S-shaped body medial/distal | wk13 | CLDN3 | 1365 | 2045 | 0.71 | 0.69 | 0.27 | 1.70114864585521e-64 | 5.73185024734453e-60 |
73 | 18 | SSBm/d | S-shaped body medial/distal | wk13 | KLHL13 | 90293 | 22931 | 0.71 | 0.41 | 0.06 | 1.48249240110567e-97 | 4.99510989628546e-93 |
73 | 18 | SSBm/d | S-shaped body medial/distal | wk13 | NUDT4 | 11163 | 8051 | 0.7 | 0.58 | 0.24 | 1.84413190885628e-49 | 6.21361805370034e-45 |
73 | 18 | SSBm/d | S-shaped body medial/distal | wk13 | EPHA4 | 2043 | 3388 | 0.7 | 0.42 | 0.09 | 5.56550997739011e-77 | 1.87524293178182e-72 |
73 | 18 | SSBm/d | S-shaped body medial/distal | wk13 | SPP1 | 6696 | 11255 | 0.7 | 0.51 | 0.17 | 2.90320309552776e-49 | 9.78205251007124e-45 |
73 | 18 | SSBm/d | S-shaped body medial/distal | wk13 | IRX1 | 79192 | 14358 | 0.69 | 0.36 | 0.05 | 3.5681074123053e-93 | 1.20223811150215e-88 |
73 | 18 | SSBm/d | S-shaped body medial/distal | wk13 | CXCR4 | 7852 | 2561 | 0.68 | 0.46 | 0.14 | 9.38717196394738e-57 | 3.16291372153243e-52 |
73 | 18 | SSBm/d | S-shaped body medial/distal | wk13 | EPCAM | 4072 | 11529 | 0.68 | 0.91 | 0.51 | 8.70455692443263e-66 | 2.93291341011833e-61 |
73 | 18 | SSBm/d | S-shaped body medial/distal | wk13 | HOXD8 | 3234 | 5139 | 0.68 | 0.5 | 0.16 | 5.49318738233515e-59 | 1.85087455660401e-54 |
73 | 18 | SSBm/d | S-shaped body medial/distal | wk13 | ATF3 | 467 | 785 | 0.68 | 0.43 | 0.14 | 1.3144688882382e-46 | 4.42897147202978e-42 |
73 | 18 | SSBm/d | S-shaped body medial/distal | wk13 | DUSP6 | 1848 | 3072 | 0.68 | 0.49 | 0.15 | 2.63267224810685e-59 | 8.87052587277123e-55 |
73 | 18 | SSBm/d | S-shaped body medial/distal | wk13 | VAV3 | 10451 | 12659 | 0.67 | 0.39 | 0.11 | 3.80809804444543e-51 | 1.28310055509544e-46 |
73 | 18 | SSBm/d | S-shaped body medial/distal | wk13 | LRATD2 | 157638 | 24166 | 0.67 | 0.41 | 0.11 | 4.98943196994794e-62 | 1.68113920795426e-57 |
73 | 18 | SSBm/d | S-shaped body medial/distal | wk13 | STAT3 | 6774 | 11364 | 0.67 | 0.49 | 0.17 | 3.64041177430111e-50 | 1.22660034323302e-45 |
73 | 18 | SSBm/d | S-shaped body medial/distal | wk13 | TFAP2B | 7021 | 11743 | 0.66 | 0.25 | 0.02 | 4.31034141697819e-95 | 1.45232643703663e-90 |
73 | 18 | SSBm/d | S-shaped body medial/distal | wk13 | MGLL | 11343 | 17038 | 0.64 | 0.39 | 0.07 | 2.25115472607792e-78 | 7.58504073404693e-74 |
73 | 18 | SSBm/d | S-shaped body medial/distal | wk13 | HMGA1 | 3159 | 5010 | 0.64 | 0.85 | 0.44 | 2.63123482697227e-60 | 8.86568262600036e-56 |
73 | 18 | SSBm/d | S-shaped body medial/distal | wk13 | SLC12A1 | 6557 | 10910 | 0.63 | 0.23 | 0.02 | 2.251666677961e-80 | 7.5867657047218e-76 |
73 | 18 | SSBm/d | S-shaped body medial/distal | wk13 | ZNF44 | 51710 | 13110 | 0.63 | 0.33 | 0.07 | 2.07915847972832e-61 | 7.00551658159661e-57 |
73 | 18 | SSBm/d | S-shaped body medial/distal | wk13 | LRATD1 | 151354 | 20743 | 0.63 | 0.43 | 0.14 | 2.223481541165e-45 | 7.49179870480134e-41 |
73 | 18 | SSBm/d | S-shaped body medial/distal | wk13 | TMEM72 | 643236 | 31658 | 0.63 | 0.27 | 0.03 | 1.84926044244898e-79 | 6.23089813478759e-75 |
73 | 18 | SSBm/d | S-shaped body medial/distal | wk13 | BTG1 | 694 | 1130 | 0.62 | 0.95 | 0.75 | 8.37521815555e-54 | 2.82194600533102e-49 |
73 | 18 | SSBm/d | S-shaped body medial/distal | wk13 | RBM47 | 54502 | 30358 | 0.62 | 0.58 | 0.23 | 1.56274572352578e-52 | 5.26551544084776e-48 |
73 | 18 | SSBm/d | S-shaped body medial/distal | wk13 | CCNL1 | 57018 | 20569 | 0.62 | 0.79 | 0.48 | 2.64047221373414e-42 | 8.89680707695582e-38 |
73 | 18 | SSBm/d | S-shaped body medial/distal | wk13 | POU3F3 | 5455 | 9216 | 0.61 | 0.38 | 0.08 | 8.48215085872678e-69 | 2.8579759103394e-64 |
73 | 18 | SSBm/d | S-shaped body medial/distal | wk13 | HOXB3 | 3213 | 5114 | 0.61 | 0.4 | 0.11 | 3.90777566924838e-54 | 1.31668593399655e-49 |
73 | 18 | SSBm/d | S-shaped body medial/distal | wk13 | GLRX | 2745 | 4330 | 0.6 | 0.35 | 0.09 | 1.13809165615939e-50 | 3.83468602626345e-46 |
73 | 18 | SSBm/d | S-shaped body medial/distal | wk13 | LMO4 | 8543 | 6644 | 0.59 | 0.53 | 0.23 | 1.52193840196282e-40 | 5.12801925157351e-36 |
73 | 18 | SSBm/d | S-shaped body medial/distal | wk13 | ZFP36 | 7538 | 12862 | 0.59 | 0.43 | 0.13 | 1.13095627573083e-45 | 3.81064407544745e-41 |
73 | 18 | SSBm/d | S-shaped body medial/distal | wk13 | HOXB-AS3 | 404266 | 40283 | 0.59 | 0.31 | 0.07 | 1.72799854006809e-49 | 5.82231828090543e-45 |
73 | 18 | SSBm/d | S-shaped body medial/distal | wk13 | PTGR1 | 22949 | 18429 | 0.59 | 0.62 | 0.43 | 4.45046793943046e-16 | 1.4995406675117e-11 |
73 | 18 | SSBm/d | S-shaped body medial/distal | wk13 | RND3 | 390 | 671 | 0.59 | 0.41 | 0.13 | 2.29094596650548e-46 | 7.71911333954357e-42 |
73 | 18 | SSBm/d | S-shaped body medial/distal | wk13 | DMKN | 93099 | 25063 | 0.58 | 0.39 | 0.12 | 3.82567503295325e-48 | 1.28902294560327e-43 |
73 | 18 | SSBm/d | S-shaped body medial/distal | wk13 | ESRRG | 2104 | 3474 | 0.58 | 0.29 | 0.04 | 3.4741376302875e-69 | 1.17057593314907e-64 |
73 | 18 | SSBm/d | S-shaped body medial/distal | wk13 | SOX4 | 6659 | 11200 | 0.58 | 0.84 | 0.58 | 4.48944864487418e-38 | 1.51267482640391e-33 |
73 | 18 | SSBm/d | S-shaped body medial/distal | wk13 | IER2 | 9592 | 28871 | 0.57 | 0.92 | 0.68 | 1.75186702388553e-44 | 5.90274075027991e-40 |
73 | 18 | SSBm/d | S-shaped body medial/distal | wk13 | IRX2 | 153572 | 14359 | 0.57 | 0.29 | 0.03 | 5.51849587286128e-80 | 1.85940199940188e-75 |
73 | 18 | SSBm/d | S-shaped body medial/distal | wk13 | CLDN7 | 1366 | 2049 | 0.57 | 0.38 | 0.11 | 6.02483734682721e-45 | 2.03000869563996e-40 |
73 | 18 | SSBm/d | S-shaped body medial/distal | wk13 | PERP | 64065 | 17637 | 0.56 | 0.39 | 0.11 | 9.50607665286789e-50 | 3.20297746741731e-45 |
73 | 18 | SSBm/d | S-shaped body medial/distal | wk13 | EFNA1 | 1942 | 3221 | 0.54 | 0.49 | 0.22 | 1.08303670478774e-30 | 3.64918387311183e-26 |
73 | 18 | SSBm/d | S-shaped body medial/distal | wk13 | MCL1 | 4170 | 6943 | 0.54 | 0.76 | 0.47 | 2.35489717648447e-35 | 7.93459054644678e-31 |
73 | 18 | SSBm/d | S-shaped body medial/distal | wk13 | UGT8 | 7368 | 12555 | 0.54 | 0.35 | 0.08 | 1.77726578266128e-59 | 5.98831932809893e-55 |
73 | 18 | SSBm/d | S-shaped body medial/distal | wk13 | PRR15L | 79170 | 28149 | 0.54 | 0.24 | 0.02 | 2.28696125433958e-85 | 7.70568725037179e-81 |
73 | 18 | SSBm/d | S-shaped body medial/distal | wk13 | HOXB2 | 3212 | 5113 | 0.53 | 0.47 | 0.18 | 2.93442138963376e-36 | 9.887239430232e-32 |
73 | 18 | SSBm/d | S-shaped body medial/distal | wk13 | KCTD1 | 284252 | 18249 | 0.53 | 0.31 | 0.09 | 1.42486630599192e-37 | 4.80094453140919e-33 |
73 | 18 | SSBm/d | S-shaped body medial/distal | wk13 | HLA-DMB | 3109 | 4935 | 0.53 | 0.37 | 0.12 | 2.9118380679966e-38 | 9.81114718630774e-34 |
73 | 18 | SSBm/d | S-shaped body medial/distal | wk13 | JUNB | 3726 | 6205 | 0.53 | 0.68 | 0.38 | 3.69324226412689e-30 | 1.24440104847492e-25 |
73 | 18 | SSBm/d | S-shaped body medial/distal | wk13 | ODC1 | 4953 | 8109 | 0.53 | 0.79 | 0.64 | 8.55882104092002e-12 | 2.88380916152759e-07 |
73 | 18 | SSBm/d | S-shaped body medial/distal | wk13 | SAT1 | 6303 | 10540 | 0.53 | 0.65 | 0.4 | 4.39737410910474e-26 | 1.48165123232175e-21 |
73 | 18 | SSBm/d | S-shaped body medial/distal | wk13 | DUSP9 | 1852 | 3076 | 0.53 | 0.38 | 0.12 | 2.32816506037505e-38 | 7.84451935442771e-34 |
73 | 18 | SSBm/d | S-shaped body medial/distal | wk13 | SLC25A25 | 114789 | 20663 | 0.53 | 0.3 | 0.09 | 8.42785191047572e-35 | 2.83968042271569e-30 |
73 | 18 | SSBm/d | S-shaped body medial/distal | wk13 | JUN | 3725 | 6204 | 0.53 | 0.97 | 0.81 | 6.77623684668093e-48 | 2.28318524312067e-43 |
73 | 18 | SSBm/d | S-shaped body medial/distal | wk13 | TJP2 | 9414 | 11828 | 0.52 | 0.35 | 0.08 | 5.80137649827133e-55 | 1.95471579732754e-50 |
73 | 18 | SSBm/d | S-shaped body medial/distal | wk13 | GSTM3 | 2947 | 4635 | 0.52 | 0.44 | 0.18 | 1.96901006901207e-33 | 6.63438252652926e-29 |
73 | 18 | SSBm/d | S-shaped body medial/distal | wk13 | ERBB4 | 2066 | 3432 | 0.52 | 0.39 | 0.12 | 2.69830823843792e-42 | 9.09167977859272e-38 |
73 | 18 | SSBm/d | S-shaped body medial/distal | wk13 | HOXB8 | 3218 | 5119 | 0.51 | 0.37 | 0.1 | 1.07920731285904e-47 | 3.63628111994726e-43 |
73 | 18 | SSBm/d | S-shaped body medial/distal | wk13 | MAFF | 23764 | 6780 | 0.51 | 0.29 | 0.07 | 2.46329962793001e-42 | 8.29984176634739e-38 |
73 | 18 | SSBm/d | S-shaped body medial/distal | wk13 | CYS1 | 192668 | 18525 | 0.51 | 0.37 | 0.11 | 2.92760042921752e-41 | 9.86425688620553e-37 |
73 | 18 | SSBm/d | S-shaped body medial/distal | wk13 | CCNG2 | 901 | 1593 | 0.51 | 0.52 | 0.24 | 3.30830949430245e-31 | 1.11470180101027e-26 |
73 | 18 | SSBm/d | S-shaped body medial/distal | wk13 | KLF6 | 1316 | 2235 | 0.51 | 0.44 | 0.2 | 9.0168635561688e-25 | 3.03814200661551e-20 |
73 | 18 | SSBm/d | S-shaped body medial/distal | wk13 | CPM | 1368 | 2311 | 0.51 | 0.27 | 0.06 | 4.15021156139932e-44 | 1.39837228349789e-39 |
73 | 18 | SSBm/d | S-shaped body medial/distal | wk13 | FAM171A1 | 221061 | 23522 | 0.5 | 0.36 | 0.11 | 4.42927848258713e-39 | 1.49240109192291e-34 |
73 | 18 | SSBm/d | S-shaped body medial/distal | wk13 | BASP1 | 10409 | 957 | 0.49 | 0.43 | 0.15 | 1.674934403415e-38 | 5.6435239788665e-34 |
73 | 18 | SSBm/d | S-shaped body medial/distal | wk13 | SNHG8 | 100093630 | 33098 | 0.48 | 0.75 | 0.45 | 1.91455206272892e-31 | 6.45089172015882e-27 |
73 | 18 | SSBm/d | S-shaped body medial/distal | wk13 | KRT8 | 3856 | 6446 | 0.48 | 0.48 | 0.21 | 3.90592421978657e-31 | 1.31606210661489e-26 |
73 | 18 | SSBm/d | S-shaped body medial/distal | wk13 | CLDN19 | 149461 | 2040 | 0.48 | 0.29 | 0.05 | 4.34630608290496e-57 | 1.464444371574e-52 |
73 | 18 | SSBm/d | S-shaped body medial/distal | wk13 | PRSS8 | 5652 | 9491 | 0.48 | 0.27 | 0.04 | 2.03091990429378e-58 | 6.84298152552745e-54 |
73 | 18 | SSBm/d | S-shaped body medial/distal | wk13 | PRSS35 | 167681 | 21387 | 0.48 | 0.24 | 0.03 | 2.5892423823276e-60 | 8.7241932830146e-56 |
73 | 18 | SSBm/d | S-shaped body medial/distal | wk13 | SMS | 6611 | 11123 | 0.48 | 0.73 | 0.44 | 2.18857103079446e-30 | 7.37417123115885e-26 |
73 | 18 | SSBm/d | S-shaped body medial/distal | wk13 | IMPA2 | 3613 | 6051 | 0.48 | 0.35 | 0.12 | 2.7461679360562e-36 | 9.25293824374775e-32 |
73 | 18 | SSBm/d | S-shaped body medial/distal | wk13 | TBC1D4 | 9882 | 19165 | 0.47 | 0.29 | 0.07 | 1.52410211430247e-41 | 5.13530966393073e-37 |
73 | 18 | SSBm/d | S-shaped body medial/distal | wk13 | MYC | 4609 | 7553 | 0.47 | 0.48 | 0.21 | 9.02538236045152e-29 | 3.04101233253054e-24 |