Marker Genes
Dataset: Single-cell transcriptomics reveals gene expression dynamics of human fetal kidney development
- tissue: Kidney
- ontology: Kidney
- genotype: -
- stage: Fetal
- treatment condition: WT
- cell/nucleus: Cells
- pmid: 30789893
- subset name: wk13
- total genes: Not reported
- clustering: scran
- pseudotime: Monocle 2
- link: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE114530
Rows:100
dataset id | cluster id | cluster name | cell type name | sample id | gene symbol | entrez geneid | species specific geneid |
avg log fc (?)
|
pct 1 | pct 2 | p value | padj |
---|---|---|---|---|---|---|---|---|---|---|---|---|
73 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk13 | CCND1 | 595 | 1582 | 1.29 | 0.76 | 0.24 | 3.33514647019968e-90 | 1.12374425166908e-85 |
73 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk13 | CD24 | 100133941 | 1645 | 1 | 0.98 | 0.52 | 2.19185462261234e-76 | 7.38523496543001e-72 |
73 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk13 | LIMCH1 | 22998 | 29191 | 0.97 | 0.56 | 0.15 | 2.80571926368343e-66 | 9.45359048705496e-62 |
73 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk13 | HMGA1 | 3159 | 5010 | 0.96 | 0.89 | 0.45 | 1.92986358902859e-73 | 6.50248237687293e-69 |
73 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk13 | TSPAN15 | 23555 | 23298 | 0.89 | 0.44 | 0.09 | 4.34615484942207e-69 | 1.46439341496427e-64 |
73 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk13 | TUBB2B | 347733 | 30829 | 0.84 | 0.78 | 0.29 | 2.43156785877625e-67 | 8.19292474336069e-63 |
73 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk13 | PCNA | 5111 | 8729 | 0.75 | 0.5 | 0.25 | 2.43732073989718e-25 | 8.21230850100955e-21 |
73 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk13 | MDK | 4192 | 6972 | 0.75 | 1 | 0.66 | 1.08794446533026e-62 | 3.66572008148379e-58 |
73 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk13 | SPON1 | 10418 | 11252 | 0.71 | 0.37 | 0.1 | 8.71461049930916e-37 | 2.93630086163723e-32 |
73 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk13 | TMSB15A | 11013 | 30744 | 0.71 | 0.55 | 0.16 | 3.01478516907305e-50 | 1.01580171486747e-45 |
73 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk13 | MCM7 | 4176 | 6950 | 0.7 | 0.52 | 0.22 | 1.41090783647808e-33 | 4.75391286422925e-29 |
73 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk13 | MCM3 | 4172 | 6945 | 0.67 | 0.52 | 0.19 | 2.36707339951965e-36 | 7.9756171123415e-32 |
73 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk13 | JAG1 | 182 | 6188 | 0.67 | 0.6 | 0.28 | 2.29484568929593e-31 | 7.73225306551372e-27 |
73 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk13 | RPSA | 3921 | 6502 | 0.65 | 1 | 0.93 | 6.14918147196225e-76 | 2.07190520516296e-71 |
73 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk13 | PLEKHA1 | 59338 | 14335 | 0.64 | 0.57 | 0.29 | 7.9968458051304e-26 | 2.69445722558064e-21 |
73 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk13 | LHX1 | 3975 | 6593 | 0.63 | 0.55 | 0.26 | 3.12099446854386e-26 | 1.05158787623117e-21 |
73 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk13 | HMGB1 | 3146 | 4983 | 0.61 | 0.99 | 0.93 | 2.37613471249993e-49 | 8.00614830029727e-45 |
73 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk13 | HOXB8 | 3218 | 5119 | 0.6 | 0.33 | 0.11 | 1.16138227502047e-24 | 3.91316143745397e-20 |
73 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk13 | SMS | 6611 | 11123 | 0.59 | 0.78 | 0.45 | 7.80152502452634e-33 | 2.6286458417639e-28 |
73 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk13 | CADM1 | 23705 | 5951 | 0.59 | 0.64 | 0.3 | 3.02408023444761e-30 | 1.01893359419478e-25 |
73 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk13 | CXCR4 | 7852 | 2561 | 0.59 | 0.43 | 0.15 | 5.06768999849123e-30 | 1.70750746809164e-25 |
73 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk13 | PAX2 | 5076 | 8616 | 0.57 | 0.51 | 0.23 | 5.57835517577884e-28 | 1.87957099292692e-23 |
73 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk13 | EMX2 | 2018 | 3341 | 0.57 | 0.51 | 0.25 | 1.64844851188131e-22 | 5.55428241593288e-18 |
73 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk13 | ETV4 | 2118 | 3493 | 0.57 | 0.28 | 0.05 | 2.68049065203379e-41 | 9.03164520296264e-37 |
73 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk13 | MARCKSL1 | 65108 | 7142 | 0.56 | 0.98 | 0.77 | 8.90123085175659e-47 | 2.99918072319087e-42 |
73 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk13 | PCLAF | 9768 | 28961 | 0.55 | 0.41 | 0.16 | 8.65485627363804e-24 | 2.9161672728396e-19 |
73 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk13 | MYC | 4609 | 7553 | 0.54 | 0.45 | 0.23 | 2.29627961230072e-18 | 7.73708452568606e-14 |
73 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk13 | CSRP2 | 1466 | 2470 | 0.53 | 0.42 | 0.16 | 7.62573115780412e-27 | 2.56941385631052e-22 |
73 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk13 | SINHCAF | 58516 | 30702 | 0.53 | 0.72 | 0.41 | 1.10264321925135e-25 | 3.7152460629455e-21 |
73 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk13 | HMGA2 | 8091 | 5009 | 0.53 | 0.55 | 0.25 | 3.82880716907288e-27 | 1.29007828754742e-22 |
73 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk13 | PODXL2 | 50512 | 17936 | 0.53 | 0.43 | 0.16 | 1.05700030667482e-27 | 3.56145683331012e-23 |
73 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk13 | HNRNPA1 | 3178 | 5031 | 0.53 | 1 | 0.98 | 7.78895708798524e-66 | 2.62441120122575e-61 |
73 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk13 | PAPPA2 | 60676 | 14615 | 0.53 | 0.2 | 0.04 | 5.0079989576785e-28 | 1.68739516880019e-23 |
73 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk13 | CALCA | 796 | 1437 | 0.53 | 0.16 | 0.03 | 2.39165827826326e-25 | 8.05845340278021e-21 |
73 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk13 | HOXB9 | 3219 | 5120 | 0.52 | 0.25 | 0.07 | 4.24723383671542e-26 | 1.43106296894289e-21 |
73 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk13 | MECOM | 2122 | 3498 | 0.52 | 0.3 | 0.1 | 1.53722824873762e-23 | 5.17953686129653e-19 |
73 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk13 | DKK1 | 22943 | 2891 | 0.52 | 0.22 | 0.09 | 5.21445756816305e-12 | 1.75695933301686e-07 |
73 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk13 | RPS2 | 6187 | 10404 | 0.52 | 1 | 0.99 | 8.01819354740314e-70 | 2.70165013386202e-65 |
73 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk13 | MGLL | 11343 | 17038 | 0.51 | 0.3 | 0.09 | 3.97665451232179e-26 | 1.3398939713817e-21 |
73 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk13 | TYMS | 7298 | 12441 | 0.51 | 0.35 | 0.13 | 1.01571252451938e-22 | 3.42234178011561e-18 |
73 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk13 | UHRF1 | 29128 | 12556 | 0.51 | 0.3 | 0.07 | 2.38222621711073e-34 | 8.0266730159329e-30 |
73 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk13 | RPLP0 | 6175 | 10371 | 0.5 | 1 | 0.97 | 8.66921915565109e-63 | 2.92100670230508e-58 |
73 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk13 | HNF1B | 6928 | 11630 | 0.5 | 0.49 | 0.21 | 8.22158205719836e-26 | 2.77017985835242e-21 |
73 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk13 | LDHB | 3945 | 6541 | 0.49 | 0.98 | 0.86 | 1.20231194760308e-38 | 4.05106987625381e-34 |
73 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk13 | GINS2 | 51659 | 24575 | 0.49 | 0.29 | 0.08 | 7.68428732581803e-27 | 2.58914377156113e-22 |
73 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk13 | CLDN10 | 9071 | 2033 | 0.49 | 0.29 | 0.14 | 1.7364762418306e-12 | 5.85088304922402e-08 |
73 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk13 | EPCAM | 4072 | 11529 | 0.49 | 0.86 | 0.53 | 1.33191784317519e-28 | 4.4877639807945e-24 |
73 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk13 | RPS3 | 6188 | 10420 | 0.49 | 1 | 0.97 | 4.64212712764241e-48 | 1.56411831438783e-43 |
73 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk13 | GNG11 | 2791 | 4403 | 0.49 | 0.52 | 0.24 | 3.90699232722707e-24 | 1.31642199473589e-19 |
73 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk13 | CENPV | 201161 | 29920 | 0.49 | 0.48 | 0.24 | 1.51104863250659e-19 | 5.09132726236772e-15 |
73 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk13 | FBL | 2091 | 3599 | 0.48 | 0.6 | 0.37 | 5.51709332987384e-17 | 1.85892942656769e-12 |
73 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk13 | HOXB2 | 3212 | 5113 | 0.48 | 0.45 | 0.2 | 4.61679023817286e-22 | 1.55558130284996e-17 |
73 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk13 | RPLP2 | 6181 | 10377 | 0.48 | 0.99 | 0.91 | 2.38319680861467e-48 | 8.02994332694627e-44 |
73 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk13 | EPHA4 | 2043 | 3388 | 0.48 | 0.34 | 0.11 | 1.010211587864e-27 | 3.40380692414896e-23 |
73 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk13 | FXYD6 | 53826 | 4030 | 0.48 | 0.44 | 0.16 | 1.16113244412884e-28 | 3.91231965724771e-24 |
73 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk13 | HOXB6 | 3216 | 5117 | 0.48 | 0.31 | 0.09 | 2.49624165502047e-26 | 8.41083663242596e-22 |
73 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk13 | RPS3A | 6189 | 10421 | 0.48 | 1 | 0.99 | 1.05533995225606e-65 | 3.55586243513156e-61 |
73 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk13 | HELLS | 3070 | 4861 | 0.48 | 0.28 | 0.08 | 7.67615812544662e-27 | 2.58640471878799e-22 |
73 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk13 | ACTL6A | 86 | 24124 | 0.47 | 0.45 | 0.23 | 9.4888371614634e-17 | 3.19716879318348e-12 |
73 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk13 | RPS24 | 6229 | 10411 | 0.47 | 0.98 | 0.9 | 1.65036011571409e-37 | 5.56072337388706e-33 |
73 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk13 | RPL27A | 6157 | 10329 | 0.47 | 1 | 0.91 | 3.34933336924991e-43 | 1.12852438543507e-38 |
73 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk13 | FABP5 | 2171 | 3560 | 0.47 | 0.45 | 0.25 | 7.80675303197502e-16 | 2.63040736659366e-11 |
73 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk13 | RPS20 | 6224 | 10405 | 0.46 | 1 | 0.92 | 2.73922603744356e-41 | 9.22954821056231e-37 |
73 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk13 | GGH | 8836 | 4248 | 0.46 | 0.46 | 0.21 | 6.69983044182009e-21 | 2.25744086906686e-16 |
73 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk13 | RPS18 | 6222 | 10401 | 0.46 | 1 | 0.98 | 7.36325617940545e-51 | 2.48097553708887e-46 |
73 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk13 | RAN | 5901 | 9846 | 0.46 | 0.94 | 0.78 | 8.06151882555459e-25 | 2.71624815308236e-20 |
73 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk13 | CDK4 | 1019 | 1773 | 0.46 | 0.64 | 0.41 | 6.92428613920896e-17 | 2.33306897174507e-12 |
73 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk13 | FBLN1 | 2192 | 3600 | 0.46 | 0.38 | 0.15 | 2.27570935112281e-20 | 7.6677750876732e-16 |
73 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk13 | PHGDH | 26227 | 8923 | 0.46 | 0.62 | 0.35 | 4.56482080734174e-20 | 1.53807072282573e-15 |
73 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk13 | GGCT | 79017 | 21705 | 0.46 | 0.42 | 0.19 | 1.75173910203522e-19 | 5.90230973039746e-15 |
73 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk13 | RPS11 | 6205 | 10384 | 0.45 | 0.99 | 0.88 | 5.32319972557941e-37 | 1.79359891553673e-32 |
73 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk13 | FEN1 | 2237 | 3650 | 0.45 | 0.28 | 0.09 | 1.14917213940299e-20 | 3.87202060650442e-16 |
73 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk13 | DEK | 7913 | 2768 | 0.45 | 0.72 | 0.46 | 7.51062747901452e-19 | 2.53063082277915e-14 |
73 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk13 | DUSP6 | 1848 | 3072 | 0.45 | 0.37 | 0.17 | 1.05618824962537e-15 | 3.55872068828773e-11 |
73 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk13 | NASP | 4678 | 7644 | 0.45 | 0.63 | 0.39 | 3.22471759273601e-17 | 1.08653634569647e-12 |
73 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk13 | H2AFZ | 3015 | 4741 | 0.45 | 0.93 | 0.8 | 2.03543378604818e-21 | 6.85819059871074e-17 |
73 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk13 | NPM1 | 4869 | 7910 | 0.44 | 0.99 | 0.94 | 7.05109843645029e-43 | 2.37579710717756e-38 |
73 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk13 | MAL | 4118 | 6817 | 0.44 | 0.39 | 0.14 | 3.36731630677444e-25 | 1.13458355640458e-20 |
73 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk13 | DNER | 92737 | 24456 | 0.44 | 0.29 | 0.09 | 3.09263850257902e-22 | 1.04203361705898e-17 |
73 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk13 | ANP32E | 81611 | 16673 | 0.44 | 0.51 | 0.25 | 1.67191015095562e-19 | 5.63333406262987e-15 |
73 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk13 | HES4 | 57801 | 24149 | 0.44 | 0.66 | 0.42 | 1.71930814209356e-16 | 5.79303685397005e-12 |
73 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk13 | TES | 26136 | 14620 | 0.44 | 0.32 | 0.11 | 1.15541944281313e-22 | 3.89307027061458e-18 |
73 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk13 | RPS10 | 6204 | 10383 | 0.44 | 0.97 | 0.84 | 8.04682375016734e-31 | 2.71129679438138e-26 |
73 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk13 | SOX4 | 6659 | 11200 | 0.44 | 0.8 | 0.6 | 1.70278325655013e-17 | 5.73735790462002e-13 |
73 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk13 | HMGB3 | 3149 | 5004 | 0.44 | 0.47 | 0.22 | 1.33311625294439e-19 | 4.49180190267084e-15 |
73 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk13 | PAICS | 10606 | 8587 | 0.44 | 0.47 | 0.25 | 2.59308529845615e-17 | 8.73714160461815e-13 |
73 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk13 | RPL5 | 6125 | 10360 | 0.44 | 1 | 0.98 | 1.4857541848007e-46 | 5.00610015026749e-42 |
73 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk13 | ENO1 | 2023 | 3350 | 0.43 | 0.87 | 0.67 | 7.65656870887106e-21 | 2.57980426076702e-16 |
73 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk13 | DCDC2 | 51473 | 18141 | 0.43 | 0.49 | 0.26 | 1.44837315442677e-16 | 4.88014850652557e-12 |
73 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk13 | RPL8 | 6132 | 10368 | 0.43 | 0.99 | 0.98 | 5.84932944267726e-50 | 1.97087306241567e-45 |
73 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk13 | PAFAH1B3 | 5050 | 8576 | 0.43 | 0.59 | 0.36 | 1.61415713312636e-15 | 5.43874104435597e-11 |
73 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk13 | SNRPE | 6635 | 11161 | 0.43 | 0.79 | 0.54 | 4.13448801922136e-17 | 1.39307439319645e-12 |
73 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk13 | LMNB1 | 4001 | 6637 | 0.43 | 0.34 | 0.12 | 3.58705179562269e-21 | 1.20862123201711e-16 |
73 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk13 | RPL18A | 6142 | 10311 | 0.43 | 1 | 0.97 | 2.20324682927536e-45 | 7.4236198665604e-41 |
73 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk13 | HLA-DMB | 3109 | 4935 | 0.43 | 0.33 | 0.13 | 1.40831424287398e-18 | 4.74517400993959e-14 |
73 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk13 | RPL7A | 6130 | 10364 | 0.43 | 1 | 0.97 | 1.11559142878331e-43 | 3.75887376014248e-39 |
73 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk13 | LSM4 | 25804 | 17259 | 0.42 | 0.66 | 0.39 | 3.50241379720152e-18 | 1.18010330482908e-13 |
73 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk13 | C19orf48 | 84798 | 29667 | 0.42 | 0.45 | 0.25 | 5.3042366309071e-14 | 1.78720949041784e-09 |
73 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk13 | UNG | 7374 | 12572 | 0.42 | 0.35 | 0.14 | 9.5395997001337e-18 | 3.21427272296305e-13 |
73 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk13 | NHP2 | 55651 | 14377 | 0.42 | 0.67 | 0.45 | 9.96494782078897e-14 | 3.35758951873664e-09 |