Marker Genes
Dataset: Single-cell transcriptomics reveals gene expression dynamics of human fetal kidney development
- tissue: Kidney
- ontology: Kidney
- genotype: -
- stage: Fetal
- treatment condition: WT
- cell/nucleus: Cells
- pmid: 30789893
- subset name: wk13
- total genes: Not reported
- clustering: scran
- pseudotime: Monocle 2
- link: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE114530
Rows:100
dataset id | cluster id | cluster name | cell type name | sample id | gene symbol | entrez geneid | species specific geneid |
avg log fc (?)
|
pct 1 | pct 2 | p value | padj |
---|---|---|---|---|---|---|---|---|---|---|---|---|
73 | 15 | PTA | Pretubular aggregate | wk13 | HMGB2 | 3148 | 5000 | 1.8 | 0.96 | 0.35 | 2.27847911062566e-117 | 7.6771075153421e-113 |
73 | 15 | PTA | Pretubular aggregate | wk13 | UBE2C | 11065 | 15937 | 1.7 | 0.68 | 0.05 | 5.64500236057784e-189 | 1.9020270953731e-184 |
73 | 15 | PTA | Pretubular aggregate | wk13 | TOP2A | 7153 | 11989 | 1.57 | 0.77 | 0.05 | 5.6422437324029e-242 | 1.90109760319583e-237 |
73 | 15 | PTA | Pretubular aggregate | wk13 | TUBA1B | 10376 | 18809 | 1.49 | 1 | 0.77 | 4.89970676979326e-97 | 1.65090719901414e-92 |
73 | 15 | PTA | Pretubular aggregate | wk13 | PTTG1 | 9232 | 9690 | 1.46 | 0.81 | 0.15 | 4.01462612238271e-125 | 1.35268812567563e-120 |
73 | 15 | PTA | Pretubular aggregate | wk13 | CDK1 | 983 | 1722 | 1.46 | 0.71 | 0.05 | 1.96224723178879e-201 | 6.61159582278916e-197 |
73 | 15 | PTA | Pretubular aggregate | wk13 | CENPF | 1063 | 1857 | 1.45 | 0.66 | 0.05 | 1.49079140600687e-190 | 5.02307256339955e-186 |
73 | 15 | PTA | Pretubular aggregate | wk13 | CCNB1 | 891 | 1579 | 1.4 | 0.68 | 0.09 | 2.66417752223385e-136 | 8.97667974341472e-132 |
73 | 15 | PTA | Pretubular aggregate | wk13 | NUSAP1 | 51203 | 18538 | 1.37 | 0.8 | 0.06 | 3.34193820666179e-226 | 1.12603265935262e-221 |
73 | 15 | PTA | Pretubular aggregate | wk13 | CCNB2 | 9133 | 1580 | 1.3 | 0.61 | 0.06 | 1.10966644430112e-135 | 3.73891011742818e-131 |
73 | 15 | PTA | Pretubular aggregate | wk13 | MAD2L1 | 4085 | 6763 | 1.27 | 0.83 | 0.11 | 4.46139910360539e-160 | 1.5032238139688e-155 |
73 | 15 | PTA | Pretubular aggregate | wk13 | CKS1B | 1163 | 19083 | 1.22 | 0.83 | 0.25 | 5.67115734499677e-90 | 1.91083975582321e-85 |
73 | 15 | PTA | Pretubular aggregate | wk13 | BIRC5 | 332 | 593 | 1.2 | 0.71 | 0.05 | 8.40259524867549e-204 | 2.83117044308872e-199 |
73 | 15 | PTA | Pretubular aggregate | wk13 | H2AFZ | 3015 | 4741 | 1.19 | 1 | 0.8 | 2.86810185509252e-92 | 9.66378239054873e-88 |
73 | 15 | PTA | Pretubular aggregate | wk13 | CDC20 | 991 | 1723 | 1.18 | 0.53 | 0.04 | 4.32530725862104e-151 | 1.45736902771977e-146 |
73 | 15 | PTA | Pretubular aggregate | wk13 | TYMS | 7298 | 12441 | 1.16 | 0.78 | 0.11 | 2.40919536599834e-141 | 8.1175428661948e-137 |
73 | 15 | PTA | Pretubular aggregate | wk13 | KPNA2 | 3838 | 6395 | 1.15 | 0.78 | 0.27 | 2.59932676288317e-53 | 8.75817159485855e-49 |
73 | 15 | PTA | Pretubular aggregate | wk13 | AURKB | 9212 | 11390 | 1.12 | 0.64 | 0.03 | 3.2389904274239e-221 | 1.09134543461621e-216 |
73 | 15 | PTA | Pretubular aggregate | wk13 | PCLAF | 9768 | 28961 | 1.1 | 0.74 | 0.15 | 1.01134482466817e-91 | 3.40762525223692e-87 |
73 | 15 | PTA | Pretubular aggregate | wk13 | CCND1 | 595 | 1582 | 1.08 | 0.73 | 0.25 | 4.81294156563652e-54 | 1.62167253112557e-49 |
73 | 15 | PTA | Pretubular aggregate | wk13 | HMGB1 | 3146 | 4983 | 1.07 | 1 | 0.93 | 4.45891957813291e-82 | 1.5023883626561e-77 |
73 | 15 | PTA | Pretubular aggregate | wk13 | HMGA1 | 3159 | 5010 | 1.04 | 0.94 | 0.46 | 4.7411131633464e-67 | 1.59747066925794e-62 |
73 | 15 | PTA | Pretubular aggregate | wk13 | TMSB15A | 11013 | 30744 | 1.03 | 0.78 | 0.16 | 1.52057195769209e-97 | 5.12341515424773e-93 |
73 | 15 | PTA | Pretubular aggregate | wk13 | MKI67 | 4288 | 7107 | 1.01 | 0.59 | 0.04 | 1.6740107968895e-182 | 5.64041197903949e-178 |
73 | 15 | PTA | Pretubular aggregate | wk13 | SMC4 | 10051 | 14013 | 1 | 0.76 | 0.15 | 4.56925086925588e-96 | 1.53956338788708e-91 |
73 | 15 | PTA | Pretubular aggregate | wk13 | TUBA1C | 84790 | 20768 | 1 | 0.57 | 0.16 | 2.45940229758436e-47 | 8.28671010148074e-43 |
73 | 15 | PTA | Pretubular aggregate | wk13 | ZWINT | 11130 | 13195 | 0.99 | 0.68 | 0.1 | 1.72009447716556e-107 | 5.79568633136163e-103 |
73 | 15 | PTA | Pretubular aggregate | wk13 | CKS2 | 1164 | 2000 | 0.98 | 0.79 | 0.24 | 8.35324315014278e-66 | 2.81454174700911e-61 |
73 | 15 | PTA | Pretubular aggregate | wk13 | RRM2 | 6241 | 10452 | 0.97 | 0.54 | 0.04 | 7.44201875224294e-158 | 2.50751379838074e-153 |
73 | 15 | PTA | Pretubular aggregate | wk13 | CCNA2 | 890 | 1578 | 0.97 | 0.53 | 0.03 | 6.37433954144595e-181 | 2.1477699650948e-176 |
73 | 15 | PTA | Pretubular aggregate | wk13 | ARL6IP1 | 23204 | 697 | 0.94 | 0.88 | 0.63 | 2.71676683882928e-24 | 9.15387418675137e-20 |
73 | 15 | PTA | Pretubular aggregate | wk13 | LMNB1 | 4001 | 6637 | 0.93 | 0.7 | 0.11 | 2.12432860704524e-111 | 7.15771280857822e-107 |
73 | 15 | PTA | Pretubular aggregate | wk13 | NUF2 | 83540 | 14621 | 0.93 | 0.52 | 0.03 | 6.41742650619874e-166 | 2.1622876869986e-161 |
73 | 15 | PTA | Pretubular aggregate | wk13 | TK1 | 7083 | 11830 | 0.92 | 0.56 | 0.05 | 3.96278029697928e-141 | 1.3352191932642e-136 |
73 | 15 | PTA | Pretubular aggregate | wk13 | UBE2T | 29089 | 25009 | 0.92 | 0.59 | 0.06 | 5.5342338632488e-128 | 1.86470475788305e-123 |
73 | 15 | PTA | Pretubular aggregate | wk13 | TUBB | 203068 | 20778 | 0.92 | 1 | 0.85 | 1.4234055653585e-69 | 4.79602271191893e-65 |
73 | 15 | PTA | Pretubular aggregate | wk13 | PBK | 55872 | 18282 | 0.91 | 0.56 | 0.04 | 8.52971480672928e-166 | 2.87400210697936e-161 |
73 | 15 | PTA | Pretubular aggregate | wk13 | TUBB2B | 347733 | 30829 | 0.91 | 0.87 | 0.3 | 7.12846728789958e-65 | 2.40186576798488e-60 |
73 | 15 | PTA | Pretubular aggregate | wk13 | PRC1 | 9055 | 9341 | 0.91 | 0.55 | 0.04 | 4.37499402129611e-161 | 1.47411048553551e-156 |
73 | 15 | PTA | Pretubular aggregate | wk13 | PCNA | 5111 | 8729 | 0.87 | 0.72 | 0.24 | 5.53364625838184e-49 | 1.86450677029918e-44 |
73 | 15 | PTA | Pretubular aggregate | wk13 | H2AFX | 3014 | 4739 | 0.86 | 0.77 | 0.22 | 6.35828288344504e-65 | 2.14235983474797e-60 |
73 | 15 | PTA | Pretubular aggregate | wk13 | HMGN2 | 3151 | 4986 | 0.86 | 0.99 | 0.89 | 5.04700763257999e-68 | 1.7005387517215e-63 |
73 | 15 | PTA | Pretubular aggregate | wk13 | PLK1 | 5347 | 9077 | 0.85 | 0.35 | 0.02 | 1.21792970563963e-112 | 4.10369235018218e-108 |
73 | 15 | PTA | Pretubular aggregate | wk13 | KIF20B | 9585 | 7212 | 0.85 | 0.57 | 0.07 | 3.42765704311926e-109 | 1.1549147641086e-104 |
73 | 15 | PTA | Pretubular aggregate | wk13 | MCM7 | 4176 | 6950 | 0.84 | 0.72 | 0.21 | 6.13397978456314e-60 | 2.0667831486107e-55 |
73 | 15 | PTA | Pretubular aggregate | wk13 | HMGB3 | 3149 | 5004 | 0.84 | 0.73 | 0.21 | 6.64291623946599e-59 | 2.23826419772567e-54 |
73 | 15 | PTA | Pretubular aggregate | wk13 | CDKN3 | 1033 | 1791 | 0.84 | 0.5 | 0.03 | 1.34705139074333e-150 | 4.53875495597058e-146 |
73 | 15 | PTA | Pretubular aggregate | wk13 | JPT1 | 51155 | 14569 | 0.84 | 0.77 | 0.3 | 1.66316382213132e-46 | 5.60386418228928e-42 |
73 | 15 | PTA | Pretubular aggregate | wk13 | ANP32E | 81611 | 16673 | 0.84 | 0.78 | 0.24 | 6.42008459088495e-58 | 2.16318330205278e-53 |
73 | 15 | PTA | Pretubular aggregate | wk13 | GGH | 8836 | 4248 | 0.83 | 0.76 | 0.2 | 3.11406280808407e-69 | 1.04925232255585e-64 |
73 | 15 | PTA | Pretubular aggregate | wk13 | PIMREG | 54478 | 25483 | 0.8 | 0.5 | 0.04 | 1.04784945806689e-135 | 3.53062396401056e-131 |
73 | 15 | PTA | Pretubular aggregate | wk13 | TPX2 | 22974 | 1249 | 0.8 | 0.47 | 0.02 | 5.66088216221516e-151 | 1.90737763573678e-146 |
73 | 15 | PTA | Pretubular aggregate | wk13 | BUB3 | 9184 | 1151 | 0.8 | 0.78 | 0.26 | 4.67648166669449e-54 | 1.57569373277604e-49 |
73 | 15 | PTA | Pretubular aggregate | wk13 | DTYMK | 1841 | 3061 | 0.8 | 0.67 | 0.18 | 3.98458443848835e-60 | 1.34256588070427e-55 |
73 | 15 | PTA | Pretubular aggregate | wk13 | DEPDC1B | 55789 | 24902 | 0.8 | 0.55 | 0.07 | 3.24987822760078e-104 | 1.09501397000781e-99 |
73 | 15 | PTA | Pretubular aggregate | wk13 | TUBB4B | 10383 | 20771 | 0.79 | 0.91 | 0.62 | 1.08439037208587e-32 | 3.65374491970613e-28 |
73 | 15 | PTA | Pretubular aggregate | wk13 | HMMR | 3161 | 5012 | 0.79 | 0.43 | 0.03 | 8.24002587027278e-127 | 2.77639431672971e-122 |
73 | 15 | PTA | Pretubular aggregate | wk13 | TACC3 | 10460 | 11524 | 0.78 | 0.51 | 0.04 | 7.41085479526361e-139 | 2.49701341471612e-134 |
73 | 15 | PTA | Pretubular aggregate | wk13 | CENPA | 1058 | 1851 | 0.78 | 0.37 | 0.02 | 4.91053772579557e-113 | 1.65455658132956e-108 |
73 | 15 | PTA | Pretubular aggregate | wk13 | HJURP | 55355 | 25444 | 0.77 | 0.46 | 0.01 | 1.07714679522317e-186 | 3.62933841182496e-182 |
73 | 15 | PTA | Pretubular aggregate | wk13 | RAD51AP1 | 10635 | 16956 | 0.76 | 0.45 | 0.04 | 2.6731020284561e-116 | 9.00674997467997e-112 |
73 | 15 | PTA | Pretubular aggregate | wk13 | RANBP1 | 5902 | 9847 | 0.76 | 0.92 | 0.54 | 4.85603293638614e-38 | 1.63619173758594e-33 |
73 | 15 | PTA | Pretubular aggregate | wk13 | KIF22 | 3835 | 6391 | 0.74 | 0.58 | 0.11 | 2.05771080389127e-69 | 6.93325078263123e-65 |
73 | 15 | PTA | Pretubular aggregate | wk13 | CENPM | 79019 | 18352 | 0.74 | 0.46 | 0.03 | 3.09962401966013e-127 | 1.04438731718429e-122 |
73 | 15 | PTA | Pretubular aggregate | wk13 | ASPM | 259266 | 19048 | 0.73 | 0.39 | 0.02 | 1.99531958901383e-123 | 6.72302982322319e-119 |
73 | 15 | PTA | Pretubular aggregate | wk13 | DEK | 7913 | 2768 | 0.72 | 0.88 | 0.46 | 1.92801040292698e-39 | 6.49623825162217e-35 |
73 | 15 | PTA | Pretubular aggregate | wk13 | RAN | 5901 | 9846 | 0.71 | 0.99 | 0.78 | 6.35411372724782e-52 | 2.14095507925888e-47 |
73 | 15 | PTA | Pretubular aggregate | wk13 | CADM1 | 23705 | 5951 | 0.7 | 0.77 | 0.3 | 3.32536801712094e-39 | 1.12044949968873e-34 |
73 | 15 | PTA | Pretubular aggregate | wk13 | PSRC1 | 84722 | 24472 | 0.7 | 0.38 | 0.04 | 1.7786925789992e-80 | 5.99312677567992e-76 |
73 | 15 | PTA | Pretubular aggregate | wk13 | CKAP2 | 26586 | 1990 | 0.7 | 0.51 | 0.06 | 3.80397833484441e-92 | 1.28171246014248e-87 |
73 | 15 | PTA | Pretubular aggregate | wk13 | CDCA3 | 83461 | 14624 | 0.7 | 0.37 | 0.02 | 4.9209079584847e-116 | 1.65805072753184e-111 |
73 | 15 | PTA | Pretubular aggregate | wk13 | PIF1 | 80119 | 26220 | 0.69 | 0.27 | 0.01 | 1.40028859879564e-87 | 4.71813240478204e-83 |
73 | 15 | PTA | Pretubular aggregate | wk13 | GTSE1 | 51512 | 13698 | 0.69 | 0.43 | 0.03 | 5.64147344619157e-119 | 1.90083806295979e-114 |
73 | 15 | PTA | Pretubular aggregate | wk13 | STMN1 | 3925 | 6510 | 0.68 | 1 | 0.95 | 1.6532666844642e-60 | 5.57051676663367e-56 |
73 | 15 | PTA | Pretubular aggregate | wk13 | TMPO | 7112 | 11875 | 0.68 | 0.63 | 0.17 | 1.17712209120726e-49 | 3.96619517411374e-45 |
73 | 15 | PTA | Pretubular aggregate | wk13 | CENPU | 79682 | 21348 | 0.68 | 0.48 | 0.05 | 5.90342927820236e-99 | 1.9891014609975e-94 |
73 | 15 | PTA | Pretubular aggregate | wk13 | DLGAP5 | 9787 | 16864 | 0.68 | 0.41 | 0.02 | 8.84633899135134e-121 | 2.98068545974592e-116 |
73 | 15 | PTA | Pretubular aggregate | wk13 | SPC25 | 57405 | 24031 | 0.68 | 0.44 | 0.02 | 4.28091214661543e-144 | 1.4424105386806e-139 |
73 | 15 | PTA | Pretubular aggregate | wk13 | CSRP2 | 1466 | 2470 | 0.67 | 0.58 | 0.16 | 1.39270830391324e-46 | 4.69259135920526e-42 |
73 | 15 | PTA | Pretubular aggregate | wk13 | FEN1 | 2237 | 3650 | 0.67 | 0.46 | 0.09 | 4.5462695091032e-56 | 1.53182004839723e-51 |
73 | 15 | PTA | Pretubular aggregate | wk13 | H2AFV | 94239 | 20664 | 0.67 | 0.86 | 0.39 | 3.31973671500279e-39 | 1.11855208875304e-34 |
73 | 15 | PTA | Pretubular aggregate | wk13 | HIST1H4C | 8364 | 4787 | 0.67 | 0.34 | 0.06 | 4.5143764087656e-43 | 1.52107398716948e-38 |
73 | 15 | PTA | Pretubular aggregate | wk13 | LBR | 3930 | 6518 | 0.66 | 0.67 | 0.22 | 1.88660625469268e-42 | 6.35673111456153e-38 |
73 | 15 | PTA | Pretubular aggregate | wk13 | ORC6 | 23594 | 17151 | 0.66 | 0.46 | 0.07 | 1.94492983929149e-66 | 6.55324660050873e-62 |
73 | 15 | PTA | Pretubular aggregate | wk13 | LHX1 | 3975 | 6593 | 0.66 | 0.68 | 0.26 | 5.21235845736572e-32 | 1.7562520586248e-27 |
73 | 15 | PTA | Pretubular aggregate | wk13 | LDHA | 3939 | 6535 | 0.65 | 0.82 | 0.38 | 2.86606068210538e-33 | 9.65690486228588e-29 |
73 | 15 | PTA | Pretubular aggregate | wk13 | ECT2 | 1894 | 3155 | 0.65 | 0.38 | 0.03 | 8.33670775212453e-92 | 2.80897031000084e-87 |
73 | 15 | PTA | Pretubular aggregate | wk13 | SGO1 | 151648 | 25088 | 0.65 | 0.39 | 0.03 | 1.74457448350951e-108 | 5.87816926473693e-104 |
73 | 15 | PTA | Pretubular aggregate | wk13 | SMC2 | 10592 | 14011 | 0.65 | 0.56 | 0.15 | 1.01027531419326e-43 | 3.40402164364277e-39 |
73 | 15 | PTA | Pretubular aggregate | wk13 | NASP | 4678 | 7644 | 0.65 | 0.82 | 0.38 | 1.22989781227295e-35 | 4.14401768867247e-31 |
73 | 15 | PTA | Pretubular aggregate | wk13 | HES4 | 57801 | 24149 | 0.65 | 0.77 | 0.42 | 1.78845263809579e-24 | 6.02601231879995e-20 |
73 | 15 | PTA | Pretubular aggregate | wk13 | H2AFY | 9555 | 4740 | 0.65 | 0.9 | 0.46 | 8.90675897980225e-36 | 3.00104337065457e-31 |
73 | 15 | PTA | Pretubular aggregate | wk13 | ITGB3BP | 23421 | 6157 | 0.64 | 0.64 | 0.16 | 1.39903053177988e-53 | 4.71389347377914e-49 |
73 | 15 | PTA | Pretubular aggregate | wk13 | PHGDH | 26227 | 8923 | 0.64 | 0.82 | 0.34 | 4.32430634638275e-38 | 1.4570317803502e-33 |
73 | 15 | PTA | Pretubular aggregate | wk13 | FBLN1 | 2192 | 3600 | 0.63 | 0.63 | 0.14 | 8.53998866274642e-57 | 2.87746378002578e-52 |
73 | 15 | PTA | Pretubular aggregate | wk13 | CXCR4 | 7852 | 2561 | 0.63 | 0.56 | 0.15 | 2.49211341002481e-42 | 8.3969269237376e-38 |
73 | 15 | PTA | Pretubular aggregate | wk13 | DEPDC1 | 55635 | 22949 | 0.63 | 0.37 | 0.02 | 2.06740276780078e-120 | 6.96590688582795e-116 |
73 | 15 | PTA | Pretubular aggregate | wk13 | LSM4 | 25804 | 17259 | 0.62 | 0.82 | 0.39 | 2.77148910862247e-33 | 9.33825540259255e-29 |
73 | 15 | PTA | Pretubular aggregate | wk13 | ASF1B | 55723 | 20996 | 0.62 | 0.34 | 0.03 | 4.84434338356541e-81 | 1.63225305965853e-76 |
73 | 15 | PTA | Pretubular aggregate | wk13 | KIF2C | 11004 | 6393 | 0.62 | 0.41 | 0.02 | 3.91987614632387e-122 | 1.32076306874236e-117 |