Marker Genes
Dataset: Single-cell transcriptomics reveals gene expression dynamics of human fetal kidney development
- tissue: Kidney
- ontology: Kidney
- genotype: -
- stage: Fetal
- treatment condition: WT
- cell/nucleus: Cells
- pmid: 30789893
- subset name: wk13
- total genes: Not reported
- clustering: scran
- pseudotime: Monocle 2
- link: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE114530
Rows:100
| dataset id | cluster id | cluster name | cell type name | sample id | gene symbol | entrez geneid | species specific geneid |
avg log fc (?)
|
pct 1 | pct 2 | p value | padj |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 73 | 15 | PTA | Pretubular aggregate | wk13 | HMGB2 | 3148 | 5000 | 1.8 | 0.96 | 0.35 | 2.2784791106257E-117 | 7.6771075153421E-113 |
| 73 | 15 | PTA | Pretubular aggregate | wk13 | UBE2C | 11065 | 15937 | 1.7 | 0.68 | 0.05 | 5.6450023605778E-189 | 1.9020270953731E-184 |
| 73 | 15 | PTA | Pretubular aggregate | wk13 | TOP2A | 7153 | 11989 | 1.57 | 0.77 | 0.05 | 5.6422437324029E-242 | 1.9010976031958E-237 |
| 73 | 15 | PTA | Pretubular aggregate | wk13 | TUBA1B | 10376 | 18809 | 1.49 | 1 | 0.77 | 4.8997067697933E-97 | 1.6509071990141E-92 |
| 73 | 15 | PTA | Pretubular aggregate | wk13 | PTTG1 | 9232 | 9690 | 1.46 | 0.81 | 0.15 | 4.0146261223827E-125 | 1.3526881256756E-120 |
| 73 | 15 | PTA | Pretubular aggregate | wk13 | CDK1 | 983 | 1722 | 1.46 | 0.71 | 0.05 | 1.9622472317888E-201 | 6.6115958227892E-197 |
| 73 | 15 | PTA | Pretubular aggregate | wk13 | CENPF | 1063 | 1857 | 1.45 | 0.66 | 0.05 | 1.4907914060069E-190 | 5.0230725633996E-186 |
| 73 | 15 | PTA | Pretubular aggregate | wk13 | CCNB1 | 891 | 1579 | 1.4 | 0.68 | 0.09 | 2.6641775222338E-136 | 8.9766797434147E-132 |
| 73 | 15 | PTA | Pretubular aggregate | wk13 | NUSAP1 | 51203 | 18538 | 1.37 | 0.8 | 0.06 | 3.3419382066618E-226 | 1.1260326593526E-221 |
| 73 | 15 | PTA | Pretubular aggregate | wk13 | CCNB2 | 9133 | 1580 | 1.3 | 0.61 | 0.06 | 1.1096664443011E-135 | 3.7389101174282E-131 |
| 73 | 15 | PTA | Pretubular aggregate | wk13 | MAD2L1 | 4085 | 6763 | 1.27 | 0.83 | 0.11 | 4.4613991036054E-160 | 1.5032238139688E-155 |
| 73 | 15 | PTA | Pretubular aggregate | wk13 | CKS1B | 1163 | 19083 | 1.22 | 0.83 | 0.25 | 5.6711573449968E-90 | 1.9108397558232E-85 |
| 73 | 15 | PTA | Pretubular aggregate | wk13 | BIRC5 | 332 | 593 | 1.2 | 0.71 | 0.05 | 8.4025952486755E-204 | 2.8311704430887E-199 |
| 73 | 15 | PTA | Pretubular aggregate | wk13 | H2AFZ | 3015 | 4741 | 1.19 | 1 | 0.8 | 2.8681018550925E-92 | 9.6637823905487E-88 |
| 73 | 15 | PTA | Pretubular aggregate | wk13 | CDC20 | 991 | 1723 | 1.18 | 0.53 | 0.04 | 4.325307258621E-151 | 1.4573690277198E-146 |
| 73 | 15 | PTA | Pretubular aggregate | wk13 | TYMS | 7298 | 12441 | 1.16 | 0.78 | 0.11 | 2.4091953659983E-141 | 8.1175428661948E-137 |
| 73 | 15 | PTA | Pretubular aggregate | wk13 | KPNA2 | 3838 | 6395 | 1.15 | 0.78 | 0.27 | 2.5993267628832E-53 | 8.7581715948586E-49 |
| 73 | 15 | PTA | Pretubular aggregate | wk13 | AURKB | 9212 | 11390 | 1.12 | 0.64 | 0.03 | 3.2389904274239E-221 | 1.0913454346162E-216 |
| 73 | 15 | PTA | Pretubular aggregate | wk13 | PCLAF | 9768 | 28961 | 1.1 | 0.74 | 0.15 | 1.0113448246682E-91 | 3.4076252522369E-87 |
| 73 | 15 | PTA | Pretubular aggregate | wk13 | CCND1 | 595 | 1582 | 1.08 | 0.73 | 0.25 | 4.8129415656365E-54 | 1.6216725311256E-49 |
| 73 | 15 | PTA | Pretubular aggregate | wk13 | HMGB1 | 3146 | 4983 | 1.07 | 1 | 0.93 | 4.4589195781329E-82 | 1.5023883626561E-77 |
| 73 | 15 | PTA | Pretubular aggregate | wk13 | HMGA1 | 3159 | 5010 | 1.04 | 0.94 | 0.46 | 4.7411131633464E-67 | 1.5974706692579E-62 |
| 73 | 15 | PTA | Pretubular aggregate | wk13 | TMSB15A | 11013 | 30744 | 1.03 | 0.78 | 0.16 | 1.5205719576921E-97 | 5.1234151542477E-93 |
| 73 | 15 | PTA | Pretubular aggregate | wk13 | MKI67 | 4288 | 7107 | 1.01 | 0.59 | 0.04 | 1.6740107968895E-182 | 5.6404119790395E-178 |
| 73 | 15 | PTA | Pretubular aggregate | wk13 | SMC4 | 10051 | 14013 | 1 | 0.76 | 0.15 | 4.5692508692559E-96 | 1.5395633878871E-91 |
| 73 | 15 | PTA | Pretubular aggregate | wk13 | TUBA1C | 84790 | 20768 | 1 | 0.57 | 0.16 | 2.4594022975844E-47 | 8.2867101014807E-43 |
| 73 | 15 | PTA | Pretubular aggregate | wk13 | ZWINT | 11130 | 13195 | 0.99 | 0.68 | 0.1 | 1.7200944771656E-107 | 5.7956863313616E-103 |
| 73 | 15 | PTA | Pretubular aggregate | wk13 | CKS2 | 1164 | 2000 | 0.98 | 0.79 | 0.24 | 8.3532431501428E-66 | 2.8145417470091E-61 |
| 73 | 15 | PTA | Pretubular aggregate | wk13 | RRM2 | 6241 | 10452 | 0.97 | 0.54 | 0.04 | 7.4420187522429E-158 | 2.5075137983807E-153 |
| 73 | 15 | PTA | Pretubular aggregate | wk13 | CCNA2 | 890 | 1578 | 0.97 | 0.53 | 0.03 | 6.374339541446E-181 | 2.1477699650948E-176 |
| 73 | 15 | PTA | Pretubular aggregate | wk13 | ARL6IP1 | 23204 | 697 | 0.94 | 0.88 | 0.63 | 2.7167668388293E-24 | 9.1538741867514E-20 |
| 73 | 15 | PTA | Pretubular aggregate | wk13 | LMNB1 | 4001 | 6637 | 0.93 | 0.7 | 0.11 | 2.1243286070452E-111 | 7.1577128085782E-107 |
| 73 | 15 | PTA | Pretubular aggregate | wk13 | NUF2 | 83540 | 14621 | 0.93 | 0.52 | 0.03 | 6.4174265061987E-166 | 2.1622876869986E-161 |
| 73 | 15 | PTA | Pretubular aggregate | wk13 | TK1 | 7083 | 11830 | 0.92 | 0.56 | 0.05 | 3.9627802969793E-141 | 1.3352191932642E-136 |
| 73 | 15 | PTA | Pretubular aggregate | wk13 | UBE2T | 29089 | 25009 | 0.92 | 0.59 | 0.06 | 5.5342338632488E-128 | 1.864704757883E-123 |
| 73 | 15 | PTA | Pretubular aggregate | wk13 | TUBB | 203068 | 20778 | 0.92 | 1 | 0.85 | 1.4234055653585E-69 | 4.7960227119189E-65 |
| 73 | 15 | PTA | Pretubular aggregate | wk13 | PBK | 55872 | 18282 | 0.91 | 0.56 | 0.04 | 8.5297148067293E-166 | 2.8740021069794E-161 |
| 73 | 15 | PTA | Pretubular aggregate | wk13 | TUBB2B | 347733 | 30829 | 0.91 | 0.87 | 0.3 | 7.1284672878996E-65 | 2.4018657679849E-60 |
| 73 | 15 | PTA | Pretubular aggregate | wk13 | PRC1 | 9055 | 9341 | 0.91 | 0.55 | 0.04 | 4.3749940212961E-161 | 1.4741104855355E-156 |
| 73 | 15 | PTA | Pretubular aggregate | wk13 | PCNA | 5111 | 8729 | 0.87 | 0.72 | 0.24 | 5.5336462583818E-49 | 1.8645067702992E-44 |
| 73 | 15 | PTA | Pretubular aggregate | wk13 | H2AFX | 3014 | 4739 | 0.86 | 0.77 | 0.22 | 6.358282883445E-65 | 2.142359834748E-60 |
| 73 | 15 | PTA | Pretubular aggregate | wk13 | HMGN2 | 3151 | 4986 | 0.86 | 0.99 | 0.89 | 5.04700763258E-68 | 1.7005387517215E-63 |
| 73 | 15 | PTA | Pretubular aggregate | wk13 | PLK1 | 5347 | 9077 | 0.85 | 0.35 | 0.02 | 1.2179297056396E-112 | 4.1036923501822E-108 |
| 73 | 15 | PTA | Pretubular aggregate | wk13 | KIF20B | 9585 | 7212 | 0.85 | 0.57 | 0.07 | 3.4276570431193E-109 | 1.1549147641086E-104 |
| 73 | 15 | PTA | Pretubular aggregate | wk13 | MCM7 | 4176 | 6950 | 0.84 | 0.72 | 0.21 | 6.1339797845631E-60 | 2.0667831486107E-55 |
| 73 | 15 | PTA | Pretubular aggregate | wk13 | HMGB3 | 3149 | 5004 | 0.84 | 0.73 | 0.21 | 6.642916239466E-59 | 2.2382641977257E-54 |
| 73 | 15 | PTA | Pretubular aggregate | wk13 | CDKN3 | 1033 | 1791 | 0.84 | 0.5 | 0.03 | 1.3470513907433E-150 | 4.5387549559706E-146 |
| 73 | 15 | PTA | Pretubular aggregate | wk13 | JPT1 | 51155 | 14569 | 0.84 | 0.77 | 0.3 | 1.6631638221313E-46 | 5.6038641822893E-42 |
| 73 | 15 | PTA | Pretubular aggregate | wk13 | ANP32E | 81611 | 16673 | 0.84 | 0.78 | 0.24 | 6.4200845908849E-58 | 2.1631833020528E-53 |
| 73 | 15 | PTA | Pretubular aggregate | wk13 | GGH | 8836 | 4248 | 0.83 | 0.76 | 0.2 | 3.1140628080841E-69 | 1.0492523225559E-64 |
| 73 | 15 | PTA | Pretubular aggregate | wk13 | PIMREG | 54478 | 25483 | 0.8 | 0.5 | 0.04 | 1.0478494580669E-135 | 3.5306239640106E-131 |
| 73 | 15 | PTA | Pretubular aggregate | wk13 | TPX2 | 22974 | 1249 | 0.8 | 0.47 | 0.02 | 5.6608821622152E-151 | 1.9073776357368E-146 |
| 73 | 15 | PTA | Pretubular aggregate | wk13 | BUB3 | 9184 | 1151 | 0.8 | 0.78 | 0.26 | 4.6764816666945E-54 | 1.575693732776E-49 |
| 73 | 15 | PTA | Pretubular aggregate | wk13 | DTYMK | 1841 | 3061 | 0.8 | 0.67 | 0.18 | 3.9845844384883E-60 | 1.3425658807043E-55 |
| 73 | 15 | PTA | Pretubular aggregate | wk13 | DEPDC1B | 55789 | 24902 | 0.8 | 0.55 | 0.07 | 3.2498782276008E-104 | 1.0950139700078E-99 |
| 73 | 15 | PTA | Pretubular aggregate | wk13 | TUBB4B | 10383 | 20771 | 0.79 | 0.91 | 0.62 | 1.0843903720859E-32 | 3.6537449197061E-28 |
| 73 | 15 | PTA | Pretubular aggregate | wk13 | HMMR | 3161 | 5012 | 0.79 | 0.43 | 0.03 | 8.2400258702728E-127 | 2.7763943167297E-122 |
| 73 | 15 | PTA | Pretubular aggregate | wk13 | TACC3 | 10460 | 11524 | 0.78 | 0.51 | 0.04 | 7.4108547952636E-139 | 2.4970134147161E-134 |
| 73 | 15 | PTA | Pretubular aggregate | wk13 | CENPA | 1058 | 1851 | 0.78 | 0.37 | 0.02 | 4.9105377257956E-113 | 1.6545565813296E-108 |
| 73 | 15 | PTA | Pretubular aggregate | wk13 | HJURP | 55355 | 25444 | 0.77 | 0.46 | 0.01 | 1.0771467952232E-186 | 3.629338411825E-182 |
| 73 | 15 | PTA | Pretubular aggregate | wk13 | RAD51AP1 | 10635 | 16956 | 0.76 | 0.45 | 0.04 | 2.6731020284561E-116 | 9.00674997468E-112 |
| 73 | 15 | PTA | Pretubular aggregate | wk13 | RANBP1 | 5902 | 9847 | 0.76 | 0.92 | 0.54 | 4.8560329363861E-38 | 1.6361917375859E-33 |
| 73 | 15 | PTA | Pretubular aggregate | wk13 | KIF22 | 3835 | 6391 | 0.74 | 0.58 | 0.11 | 2.0577108038913E-69 | 6.9332507826312E-65 |
| 73 | 15 | PTA | Pretubular aggregate | wk13 | CENPM | 79019 | 18352 | 0.74 | 0.46 | 0.03 | 3.0996240196601E-127 | 1.0443873171843E-122 |
| 73 | 15 | PTA | Pretubular aggregate | wk13 | ASPM | 259266 | 19048 | 0.73 | 0.39 | 0.02 | 1.9953195890138E-123 | 6.7230298232232E-119 |
| 73 | 15 | PTA | Pretubular aggregate | wk13 | DEK | 7913 | 2768 | 0.72 | 0.88 | 0.46 | 1.928010402927E-39 | 6.4962382516222E-35 |
| 73 | 15 | PTA | Pretubular aggregate | wk13 | RAN | 5901 | 9846 | 0.71 | 0.99 | 0.78 | 6.3541137272478E-52 | 2.1409550792589E-47 |
| 73 | 15 | PTA | Pretubular aggregate | wk13 | CADM1 | 23705 | 5951 | 0.7 | 0.77 | 0.3 | 3.3253680171209E-39 | 1.1204494996887E-34 |
| 73 | 15 | PTA | Pretubular aggregate | wk13 | PSRC1 | 84722 | 24472 | 0.7 | 0.38 | 0.04 | 1.7786925789992E-80 | 5.9931267756799E-76 |
| 73 | 15 | PTA | Pretubular aggregate | wk13 | CKAP2 | 26586 | 1990 | 0.7 | 0.51 | 0.06 | 3.8039783348444E-92 | 1.2817124601425E-87 |
| 73 | 15 | PTA | Pretubular aggregate | wk13 | CDCA3 | 83461 | 14624 | 0.7 | 0.37 | 0.02 | 4.9209079584847E-116 | 1.6580507275318E-111 |
| 73 | 15 | PTA | Pretubular aggregate | wk13 | PIF1 | 80119 | 26220 | 0.69 | 0.27 | 0.01 | 1.4002885987956E-87 | 4.718132404782E-83 |
| 73 | 15 | PTA | Pretubular aggregate | wk13 | GTSE1 | 51512 | 13698 | 0.69 | 0.43 | 0.03 | 5.6414734461916E-119 | 1.9008380629598E-114 |
| 73 | 15 | PTA | Pretubular aggregate | wk13 | STMN1 | 3925 | 6510 | 0.68 | 1 | 0.95 | 1.6532666844642E-60 | 5.5705167666337E-56 |
| 73 | 15 | PTA | Pretubular aggregate | wk13 | TMPO | 7112 | 11875 | 0.68 | 0.63 | 0.17 | 1.1771220912073E-49 | 3.9661951741137E-45 |
| 73 | 15 | PTA | Pretubular aggregate | wk13 | CENPU | 79682 | 21348 | 0.68 | 0.48 | 0.05 | 5.9034292782024E-99 | 1.9891014609975E-94 |
| 73 | 15 | PTA | Pretubular aggregate | wk13 | DLGAP5 | 9787 | 16864 | 0.68 | 0.41 | 0.02 | 8.8463389913513E-121 | 2.9806854597459E-116 |
| 73 | 15 | PTA | Pretubular aggregate | wk13 | SPC25 | 57405 | 24031 | 0.68 | 0.44 | 0.02 | 4.2809121466154E-144 | 1.4424105386806E-139 |
| 73 | 15 | PTA | Pretubular aggregate | wk13 | CSRP2 | 1466 | 2470 | 0.67 | 0.58 | 0.16 | 1.3927083039132E-46 | 4.6925913592053E-42 |
| 73 | 15 | PTA | Pretubular aggregate | wk13 | FEN1 | 2237 | 3650 | 0.67 | 0.46 | 0.09 | 4.5462695091032E-56 | 1.5318200483972E-51 |
| 73 | 15 | PTA | Pretubular aggregate | wk13 | H2AFV | 94239 | 20664 | 0.67 | 0.86 | 0.39 | 3.3197367150028E-39 | 1.118552088753E-34 |
| 73 | 15 | PTA | Pretubular aggregate | wk13 | HIST1H4C | 8364 | 4787 | 0.67 | 0.34 | 0.06 | 4.5143764087656E-43 | 1.5210739871695E-38 |
| 73 | 15 | PTA | Pretubular aggregate | wk13 | LBR | 3930 | 6518 | 0.66 | 0.67 | 0.22 | 1.8866062546927E-42 | 6.3567311145615E-38 |
| 73 | 15 | PTA | Pretubular aggregate | wk13 | ORC6 | 23594 | 17151 | 0.66 | 0.46 | 0.07 | 1.9449298392915E-66 | 6.5532466005087E-62 |
| 73 | 15 | PTA | Pretubular aggregate | wk13 | LHX1 | 3975 | 6593 | 0.66 | 0.68 | 0.26 | 5.2123584573657E-32 | 1.7562520586248E-27 |
| 73 | 15 | PTA | Pretubular aggregate | wk13 | LDHA | 3939 | 6535 | 0.65 | 0.82 | 0.38 | 2.8660606821054E-33 | 9.6569048622859E-29 |
| 73 | 15 | PTA | Pretubular aggregate | wk13 | ECT2 | 1894 | 3155 | 0.65 | 0.38 | 0.03 | 8.3367077521245E-92 | 2.8089703100008E-87 |
| 73 | 15 | PTA | Pretubular aggregate | wk13 | SGO1 | 151648 | 25088 | 0.65 | 0.39 | 0.03 | 1.7445744835095E-108 | 5.8781692647369E-104 |
| 73 | 15 | PTA | Pretubular aggregate | wk13 | SMC2 | 10592 | 14011 | 0.65 | 0.56 | 0.15 | 1.0102753141933E-43 | 3.4040216436428E-39 |
| 73 | 15 | PTA | Pretubular aggregate | wk13 | NASP | 4678 | 7644 | 0.65 | 0.82 | 0.38 | 1.2298978122729E-35 | 4.1440176886725E-31 |
| 73 | 15 | PTA | Pretubular aggregate | wk13 | HES4 | 57801 | 24149 | 0.65 | 0.77 | 0.42 | 1.7884526380958E-24 | 6.0260123187999E-20 |
| 73 | 15 | PTA | Pretubular aggregate | wk13 | H2AFY | 9555 | 4740 | 0.65 | 0.9 | 0.46 | 8.9067589798023E-36 | 3.0010433706546E-31 |
| 73 | 15 | PTA | Pretubular aggregate | wk13 | ITGB3BP | 23421 | 6157 | 0.64 | 0.64 | 0.16 | 1.3990305317799E-53 | 4.7138934737791E-49 |
| 73 | 15 | PTA | Pretubular aggregate | wk13 | PHGDH | 26227 | 8923 | 0.64 | 0.82 | 0.34 | 4.3243063463827E-38 | 1.4570317803502E-33 |
| 73 | 15 | PTA | Pretubular aggregate | wk13 | FBLN1 | 2192 | 3600 | 0.63 | 0.63 | 0.14 | 8.5399886627464E-57 | 2.8774637800258E-52 |
| 73 | 15 | PTA | Pretubular aggregate | wk13 | CXCR4 | 7852 | 2561 | 0.63 | 0.56 | 0.15 | 2.4921134100248E-42 | 8.3969269237376E-38 |
| 73 | 15 | PTA | Pretubular aggregate | wk13 | DEPDC1 | 55635 | 22949 | 0.63 | 0.37 | 0.02 | 2.0674027678008E-120 | 6.9659068858279E-116 |
| 73 | 15 | PTA | Pretubular aggregate | wk13 | LSM4 | 25804 | 17259 | 0.62 | 0.82 | 0.39 | 2.7714891086225E-33 | 9.3382554025925E-29 |
| 73 | 15 | PTA | Pretubular aggregate | wk13 | ASF1B | 55723 | 20996 | 0.62 | 0.34 | 0.03 | 4.8443433835654E-81 | 1.6322530596585E-76 |
| 73 | 15 | PTA | Pretubular aggregate | wk13 | KIF2C | 11004 | 6393 | 0.62 | 0.41 | 0.02 | 3.9198761463239E-122 | 1.3207630687424E-117 |