Marker Genes
Dataset: Single-cell transcriptomics reveals gene expression dynamics of human fetal kidney development
- tissue: Kidney
- ontology: Kidney
- genotype: -
- stage: Fetal
- treatment condition: WT
- cell/nucleus: Cells
- pmid: 30789893
- subset name: wk13
- total genes: Not reported
- clustering: scran
- pseudotime: Monocle 2
- link: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE114530
Rows:100
| dataset id | cluster id | cluster name | cell type name | sample id | gene symbol | entrez geneid | species specific geneid |
avg log fc (?)
|
pct 1 | pct 2 | p value | padj |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 73 | 13 | Pod | Podocyte | wk13 | PODXL | 5420 | 9171 | 2.49 | 0.99 | 0.18 | 0 | 0 |
| 73 | 13 | Pod | Podocyte | wk13 | NPHS2 | 7827 | 13394 | 2.45 | 0.97 | 0.12 | 0 | 0 |
| 73 | 13 | Pod | Podocyte | wk13 | SOST | 50964 | 13771 | 2.25 | 0.87 | 0.11 | 0 | 0 |
| 73 | 13 | Pod | Podocyte | wk13 | TPPP3 | 51673 | 24162 | 2.25 | 0.92 | 0.12 | 0 | 0 |
| 73 | 13 | Pod | Podocyte | wk13 | PTPRO | 5800 | 9678 | 2.24 | 0.93 | 0.08 | 0 | 0 |
| 73 | 13 | Pod | Podocyte | wk13 | MYL9 | 10398 | 15754 | 2.21 | 0.94 | 0.25 | 0 | 0 |
| 73 | 13 | Pod | Podocyte | wk13 | CLIC5 | 53405 | 13517 | 2.17 | 0.91 | 0.1 | 0 | 0 |
| 73 | 13 | Pod | Podocyte | wk13 | MAFB | 9935 | 6408 | 2.06 | 0.99 | 0.25 | 0 | 0 |
| 73 | 13 | Pod | Podocyte | wk13 | MME | 4311 | 7154 | 2.05 | 0.84 | 0.1 | 0 | 0 |
| 73 | 13 | Pod | Podocyte | wk13 | THSD7A | 221981 | 22207 | 2.03 | 0.88 | 0.12 | 0 | 0 |
| 73 | 13 | Pod | Podocyte | wk13 | TCF21 | 6943 | 11632 | 2.03 | 0.97 | 0.21 | 0 | 0 |
| 73 | 13 | Pod | Podocyte | wk13 | AIF1 | 199 | 352 | 1.95 | 0.75 | 0.05 | 0 | 0 |
| 73 | 13 | Pod | Podocyte | wk13 | S100A6 | 6277 | 10496 | 1.94 | 0.88 | 0.24 | 0 | 0 |
| 73 | 13 | Pod | Podocyte | wk13 | MPP5 | 64398 | 18669 | 1.93 | 0.87 | 0.14 | 0 | 0 |
| 73 | 13 | Pod | Podocyte | wk13 | MXRA8 | 54587 | 7542 | 1.88 | 0.96 | 0.29 | 0 | 0 |
| 73 | 13 | Pod | Podocyte | wk13 | SPARC | 6678 | 11219 | 1.86 | 1 | 0.51 | 0 | 0 |
| 73 | 13 | Pod | Podocyte | wk13 | ST6GALNAC3 | 256435 | 19343 | 1.86 | 0.76 | 0.06 | 0 | 0 |
| 73 | 13 | Pod | Podocyte | wk13 | ANXA2 | 302 | 537 | 1.84 | 0.95 | 0.37 | 0 | 0 |
| 73 | 13 | Pod | Podocyte | wk13 | BST2 | 684 | 1119 | 1.84 | 0.88 | 0.17 | 0 | 0 |
| 73 | 13 | Pod | Podocyte | wk13 | PDLIM2 | 64236 | 13992 | 1.82 | 0.82 | 0.14 | 0 | 0 |
| 73 | 13 | Pod | Podocyte | wk13 | DDN | 23109 | 24458 | 1.82 | 0.64 | 0.02 | 0 | 0 |
| 73 | 13 | Pod | Podocyte | wk13 | TNNI1 | 7135 | 11945 | 1.82 | 0.75 | 0.12 | 0 | 0 |
| 73 | 13 | Pod | Podocyte | wk13 | ADM | 133 | 259 | 1.81 | 0.74 | 0.12 | 0 | 0 |
| 73 | 13 | Pod | Podocyte | wk13 | GADD45A | 1647 | 4095 | 1.78 | 0.92 | 0.33 | 0 | 0 |
| 73 | 13 | Pod | Podocyte | wk13 | MRGPRF | 116535 | 24828 | 1.73 | 0.7 | 0.04 | 0 | 0 |
| 73 | 13 | Pod | Podocyte | wk13 | CXCL12 | 6387 | 10672 | 1.72 | 0.61 | 0.16 | 1.9911801821818E-201 | 6.7090825058432E-197 |
| 73 | 13 | Pod | Podocyte | wk13 | NES | 10763 | 7756 | 1.67 | 0.83 | 0.13 | 0 | 0 |
| 73 | 13 | Pod | Podocyte | wk13 | SEMA3B | 7869 | 10724 | 1.64 | 0.83 | 0.16 | 0 | 0 |
| 73 | 13 | Pod | Podocyte | wk13 | PTH1R | 5745 | 9608 | 1.58 | 0.62 | 0.07 | 2.9354317681522E-286 | 9.8906437996121E-282 |
| 73 | 13 | Pod | Podocyte | wk13 | ST3GAL6 | 10402 | 18080 | 1.58 | 0.71 | 0.07 | 0 | 0 |
| 73 | 13 | Pod | Podocyte | wk13 | CPXM1 | 56265 | 15771 | 1.57 | 0.85 | 0.29 | 0 | 0 |
| 73 | 13 | Pod | Podocyte | wk13 | WT1 | 7490 | 12796 | 1.57 | 0.96 | 0.34 | 0 | 0 |
| 73 | 13 | Pod | Podocyte | wk13 | TGFBR3 | 7049 | 11774 | 1.52 | 0.66 | 0.07 | 0 | 0 |
| 73 | 13 | Pod | Podocyte | wk13 | SPOCK2 | 9806 | 13564 | 1.49 | 0.71 | 0.16 | 1.7223587465483E-278 | 5.8033155606198E-274 |
| 73 | 13 | Pod | Podocyte | wk13 | NPHS1 | 4868 | 7908 | 1.45 | 0.73 | 0.1 | 0 | 0 |
| 73 | 13 | Pod | Podocyte | wk13 | SHISA2 | 387914 | 20366 | 1.44 | 0.62 | 0.15 | 3.9470327971442E-208 | 1.3299132306698E-203 |
| 73 | 13 | Pod | Podocyte | wk13 | TYRO3 | 7301 | 12446 | 1.43 | 0.73 | 0.14 | 9.7681739718878E-306 | 3.2912885380879E-301 |
| 73 | 13 | Pod | Podocyte | wk13 | TNNT2 | 7139 | 11949 | 1.43 | 0.59 | 0.08 | 3.595053089403E-246 | 1.2113171879435E-241 |
| 73 | 13 | Pod | Podocyte | wk13 | GSN | 2934 | 4620 | 1.42 | 0.71 | 0.12 | 1.269310812154E-303 | 4.2768158504717E-299 |
| 73 | 13 | Pod | Podocyte | wk13 | CLDN5 | 7122 | 2047 | 1.41 | 0.79 | 0.14 | 0 | 0 |
| 73 | 13 | Pod | Podocyte | wk13 | TUBB2A | 7280 | 12412 | 1.39 | 0.66 | 0.18 | 2.5621860377184E-230 | 8.6330296354883E-226 |
| 73 | 13 | Pod | Podocyte | wk13 | ARMH4 | 145407 | 19846 | 1.39 | 0.61 | 0.09 | 1.3329815791987E-256 | 4.491348132952E-252 |
| 73 | 13 | Pod | Podocyte | wk13 | VASN | 114990 | 18517 | 1.36 | 0.73 | 0.19 | 2.0198220821351E-275 | 6.8055885235459E-271 |
| 73 | 13 | Pod | Podocyte | wk13 | ARHGEF3 | 50650 | 683 | 1.34 | 0.63 | 0.09 | 4.0178674700376E-270 | 1.3537802653545E-265 |
| 73 | 13 | Pod | Podocyte | wk13 | KLRB1 | 3820 | 6373 | 1.33 | 0.5 | 0.04 | 6.2496611344984E-225 | 2.1057608226579E-220 |
| 73 | 13 | Pod | Podocyte | wk13 | NTNG1 | 22854 | 23319 | 1.32 | 0.47 | 0.01 | 2.8937464241428E-246 | 9.7501892015068E-242 |
| 73 | 13 | Pod | Podocyte | wk13 | LTBP4 | 8425 | 6717 | 1.32 | 0.64 | 0.13 | 4.208337083905E-244 | 1.4179570970509E-239 |
| 73 | 13 | Pod | Podocyte | wk13 | SELENOP | 6414 | 10751 | 1.3 | 0.91 | 0.44 | 8.1109847326252E-301 | 2.7329151958107E-296 |
| 73 | 13 | Pod | Podocyte | wk13 | SEPTIN11 | 55752 | 25589 | 1.29 | 0.85 | 0.36 | 1.033297818852E-284 | 3.4815936708401E-280 |
| 73 | 13 | Pod | Podocyte | wk13 | RETREG1 | 54463 | 25964 | 1.28 | 0.59 | 0.08 | 4.2614126225114E-246 | 1.435840369029E-241 |
| 73 | 13 | Pod | Podocyte | wk13 | ACTN4 | 81 | 166 | 1.27 | 0.72 | 0.25 | 2.906668896859E-232 | 9.7937301810767E-228 |
| 73 | 13 | Pod | Podocyte | wk13 | TSC22D3 | 1831 | 3051 | 1.27 | 0.85 | 0.36 | 1.9456803376717E-264 | 6.5557753297509E-260 |
| 73 | 13 | Pod | Podocyte | wk13 | RIPOR1 | 79567 | 25836 | 1.27 | 0.54 | 0.05 | 8.4556262118511E-246 | 2.8490386958211E-241 |
| 73 | 13 | Pod | Podocyte | wk13 | LOXL1 | 4016 | 6665 | 1.26 | 0.7 | 0.19 | 3.7136899760023E-234 | 1.2512907005142E-229 |
| 73 | 13 | Pod | Podocyte | wk13 | TMSB4X | 7114 | 11881 | 1.25 | 0.99 | 0.97 | 0 | 0 |
| 73 | 13 | Pod | Podocyte | wk13 | PLTP | 5360 | 9093 | 1.24 | 0.55 | 0.1 | 1.67326029643E-206 | 5.6378832427912E-202 |
| 73 | 13 | Pod | Podocyte | wk13 | CRB2 | 286204 | 18688 | 1.23 | 0.58 | 0.11 | 1.8200529808756E-204 | 6.1324865137622E-200 |
| 73 | 13 | Pod | Podocyte | wk13 | VIM | 7431 | 12692 | 1.22 | 0.99 | 0.63 | 0 | 0 |
| 73 | 13 | Pod | Podocyte | wk13 | ENPEP | 2028 | 3355 | 1.19 | 0.59 | 0.12 | 3.2692766491376E-204 | 1.1015500741604E-199 |
| 73 | 13 | Pod | Podocyte | wk13 | SPINT2 | 10653 | 11247 | 1.14 | 0.97 | 0.69 | 0 | 0 |
| 73 | 13 | Pod | Podocyte | wk13 | DUSP1 | 1843 | 3064 | 1.14 | 0.78 | 0.38 | 1.4370909342124E-188 | 4.8421341937354E-184 |
| 73 | 13 | Pod | Podocyte | wk13 | SLC9A3R2 | 9351 | 11076 | 1.14 | 0.5 | 0.07 | 6.4930727335432E-191 | 2.18777592684E-186 |
| 73 | 13 | Pod | Podocyte | wk13 | PLD3 | 23646 | 17158 | 1.12 | 0.77 | 0.37 | 2.5662160533364E-204 | 8.6466083701116E-200 |
| 73 | 13 | Pod | Podocyte | wk13 | HACD2 | 201562 | 9640 | 1.11 | 0.54 | 0.16 | 8.9793771465517E-152 | 3.0255113357591E-147 |
| 73 | 13 | Pod | Podocyte | wk13 | TAGLN2 | 8407 | 11554 | 1.11 | 0.58 | 0.17 | 4.2723867893571E-163 | 1.439538004806E-158 |
| 73 | 13 | Pod | Podocyte | wk13 | TJP1 | 7082 | 11827 | 1.1 | 0.62 | 0.2 | 2.1166853711762E-182 | 7.1319596896409E-178 |
| 73 | 13 | Pod | Podocyte | wk13 | IQGAP2 | 10788 | 6111 | 1.1 | 0.51 | 0.08 | 5.161254631736E-196 | 1.7390331356171E-191 |
| 73 | 13 | Pod | Podocyte | wk13 | TRAM2 | 9697 | 16855 | 1.1 | 0.5 | 0.09 | 9.3276531493481E-175 | 3.1428594521413E-170 |
| 73 | 13 | Pod | Podocyte | wk13 | SYNPO | 11346 | 30672 | 1.1 | 0.43 | 0.03 | 4.1279963625304E-186 | 1.390887094391E-181 |
| 73 | 13 | Pod | Podocyte | wk13 | SRGAP1 | 57522 | 17382 | 1.09 | 0.62 | 0.2 | 8.2215216389632E-184 | 2.7701595010323E-179 |
| 73 | 13 | Pod | Podocyte | wk13 | P3H2 | 55214 | 19317 | 1.08 | 0.55 | 0.12 | 6.3653422930647E-184 | 2.1447384322252E-179 |
| 73 | 13 | Pod | Podocyte | wk13 | AXL | 558 | 905 | 1.08 | 0.42 | 0.1 | 3.3938387502255E-124 | 1.143520028501E-119 |
| 73 | 13 | Pod | Podocyte | wk13 | NEAT1 | 283131 | 30815 | 1.08 | 0.75 | 0.3 | 6.4360539613629E-202 | 2.1685640217416E-197 |
| 73 | 13 | Pod | Podocyte | wk13 | CHI3L1 | 1116 | 1932 | 1.06 | 0.33 | 0.02 | 3.1444456145869E-145 | 1.0594895053789E-140 |
| 73 | 13 | Pod | Podocyte | wk13 | EMP3 | 2014 | 3335 | 1.06 | 0.44 | 0.05 | 4.2655199200542E-178 | 1.4372242818631E-173 |
| 73 | 13 | Pod | Podocyte | wk13 | RAMP1 | 10267 | 9843 | 1.05 | 0.4 | 0.03 | 4.4086871821551E-172 | 1.4854630591554E-167 |
| 73 | 13 | Pod | Podocyte | wk13 | ITM2B | 9445 | 6174 | 1.05 | 0.98 | 0.94 | 1.6862868629192E-237 | 5.68177495592E-233 |
| 73 | 13 | Pod | Podocyte | wk13 | MYH9 | 4627 | 7579 | 1.05 | 0.56 | 0.17 | 5.7895218295304E-162 | 1.950721485242E-157 |
| 73 | 13 | Pod | Podocyte | wk13 | F3 | 2152 | 3541 | 1.04 | 0.45 | 0.1 | 1.0045299563245E-133 | 3.3846632348399E-129 |
| 73 | 13 | Pod | Podocyte | wk13 | PC | 5091 | 8636 | 1.03 | 0.43 | 0.05 | 6.7386279221382E-168 | 2.2705132920853E-163 |
| 73 | 13 | Pod | Podocyte | wk13 | DUSP23 | 54935 | 21480 | 1.03 | 0.52 | 0.17 | 1.5317908508699E-131 | 5.1612160929211E-127 |
| 73 | 13 | Pod | Podocyte | wk13 | LEPROT | 54741 | 29477 | 1.02 | 0.8 | 0.44 | 1.1660830593436E-202 | 3.9290002601523E-198 |
| 73 | 13 | Pod | Podocyte | wk13 | ANXA1 | 301 | 533 | 1.02 | 0.22 | 0.01 | 1.460579185937E-96 | 4.9212755090961E-92 |
| 73 | 13 | Pod | Podocyte | wk13 | PON2 | 5445 | 9205 | 1.01 | 0.76 | 0.38 | 2.1014376786458E-180 | 7.0805841144291E-176 |
| 73 | 13 | Pod | Podocyte | wk13 | SAMD11 | 148398 | 28706 | 1.01 | 0.48 | 0.1 | 1.4921760308988E-150 | 5.0277379185104E-146 |
| 73 | 13 | Pod | Podocyte | wk13 | GOLIM4 | 27333 | 15448 | 1.01 | 0.61 | 0.28 | 4.9963867626449E-124 | 1.6834825558056E-119 |
| 73 | 13 | Pod | Podocyte | wk13 | HEXIM1 | 10614 | 24953 | 1 | 0.62 | 0.27 | 3.2921259897708E-139 | 1.1092489309934E-134 |
| 73 | 13 | Pod | Podocyte | wk13 | VAMP2 | 6844 | 12643 | 0.99 | 0.73 | 0.39 | 6.6927038239828E-165 | 2.2550396264528E-160 |
| 73 | 13 | Pod | Podocyte | wk13 | FGF1 | 2246 | 3665 | 0.99 | 0.34 | 0.009 | 6.4157610647137E-173 | 2.1617265331447E-168 |
| 73 | 13 | Pod | Podocyte | wk13 | G0S2 | 50486 | 30229 | 0.98 | 0.28 | 0.04 | 1.8564505496919E-98 | 6.255124482132E-94 |
| 73 | 13 | Pod | Podocyte | wk13 | SDC2 | 6383 | 10659 | 0.97 | 0.8 | 0.48 | 2.9413028709061E-165 | 9.9104258932309E-161 |
| 73 | 13 | Pod | Podocyte | wk13 | VEGFA | 7422 | 12680 | 0.96 | 0.46 | 0.11 | 1.2560620482674E-134 | 4.2321754654323E-130 |
| 73 | 13 | Pod | Podocyte | wk13 | AIF1L | 83543 | 28904 | 0.96 | 0.74 | 0.35 | 1.9673870919034E-171 | 6.6289140674594E-167 |
| 73 | 13 | Pod | Podocyte | wk13 | CD151 | 977 | 1630 | 0.96 | 0.75 | 0.39 | 1.1219885169225E-178 | 3.7804281089187E-174 |
| 73 | 13 | Pod | Podocyte | wk13 | COL3A1 | 1281 | 2201 | 0.96 | 0.58 | 0.11 | 1.5676234001477E-187 | 5.2819502844576E-183 |
| 73 | 13 | Pod | Podocyte | wk13 | HTRA1 | 5654 | 9476 | 0.96 | 0.33 | 0.04 | 2.6732581168449E-127 | 9.0072758988974E-123 |
| 73 | 13 | Pod | Podocyte | wk13 | CTSL | 1514 | 2537 | 0.96 | 0.58 | 0.27 | 4.2593676701898E-108 | 1.4351513427937E-103 |
| 73 | 13 | Pod | Podocyte | wk13 | AQP3 | 360 | 636 | 0.95 | 0.4 | 0.06 | 2.5153696850231E-138 | 8.4752866167169E-134 |
| 73 | 13 | Pod | Podocyte | wk13 | WT1-AS | 51352 | 18135 | 0.95 | 0.51 | 0.12 | 1.777140873044E-145 | 5.9878984576345E-141 |
| 73 | 13 | Pod | Podocyte | wk13 | BCAM | 4059 | 6722 | 0.94 | 0.65 | 0.35 | 1.8749222234111E-106 | 6.3173629395614E-102 |