Marker Genes
Dataset: Single-cell transcriptomics reveals gene expression dynamics of human fetal kidney development
- tissue: Kidney
- ontology: Kidney
- genotype: -
- stage: Fetal
- treatment condition: WT
- cell/nucleus: Cells
- pmid: 30789893
- subset name: wk13
- total genes: Not reported
- clustering: scran
- pseudotime: Monocle 2
- link: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE114530
Rows:100
| dataset id | cluster id | cluster name | cell type name | sample id | gene symbol | entrez geneid | species specific geneid |
avg log fc (?)
|
pct 1 | pct 2 | p value | padj |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 73 | 11 | NPCc | Nephron progenitor cells c | wk13 | CRABP2 | 1382 | 2339 | 2.03 | 0.9 | 0.07 | 1.3033264825303e-192 | 4.3914282502376e-188 |
| 73 | 11 | NPCc | Nephron progenitor cells c | wk13 | TMEM100 | 55273 | 25607 | 1.85 | 0.76 | 0.1 | 8.89581445583355e-105 | 2.99735572274856e-100 |
| 73 | 11 | NPCc | Nephron progenitor cells c | wk13 | NNAT | 4826 | 7860 | 1.63 | 0.68 | 0.08 | 1.59173521718919e-97 | 5.36319264079725e-93 |
| 73 | 11 | NPCc | Nephron progenitor cells c | wk13 | IGF2 | 3481 | 5466 | 1.43 | 0.84 | 0.26 | 2.07180151494601e-53 | 6.98072802445909e-49 |
| 73 | 11 | NPCc | Nephron progenitor cells c | wk13 | LYPD1 | 116372 | 28431 | 1.35 | 0.7 | 0.1 | 7.89866153904795e-78 | 2.66137501896682e-73 |
| 73 | 11 | NPCc | Nephron progenitor cells c | wk13 | CITED1 | 4435 | 1986 | 1.31 | 0.5 | 0.01 | 4.97774903161419e-162 | 1.67720275871208e-157 |
| 73 | 11 | NPCc | Nephron progenitor cells c | wk13 | TUBA1A | 7846 | 20766 | 1.23 | 0.96 | 0.59 | 2.71609146065197e-44 | 9.15159856752074e-40 |
| 73 | 11 | NPCc | Nephron progenitor cells c | wk13 | DAPL1 | 92196 | 21490 | 1.18 | 0.41 | 0.03 | 4.23950352524291e-72 | 1.42845831779534e-67 |
| 73 | 11 | NPCc | Nephron progenitor cells c | wk13 | EYA1 | 2138 | 3519 | 1.13 | 0.47 | 0.04 | 2.11231064133153e-82 | 7.11721947490246e-78 |
| 73 | 11 | NPCc | Nephron progenitor cells c | wk13 | RBP1 | 5947 | 9919 | 1.06 | 0.79 | 0.27 | 1.03045355708711e-39 | 3.4720102152493e-35 |
| 73 | 11 | NPCc | Nephron progenitor cells c | wk13 | NKAIN3 | 286183 | 26829 | 1.03 | 0.4 | 0.03 | 3.70993250457526e-74 | 1.25002465809159e-69 |
| 73 | 11 | NPCc | Nephron progenitor cells c | wk13 | RSPO3 | 84870 | 20866 | 1.01 | 0.38 | 0.02 | 1.88554184984358e-85 | 6.35314470886296e-81 |
| 73 | 11 | NPCc | Nephron progenitor cells c | wk13 | TMSB15A | 11013 | 30744 | 1 | 0.64 | 0.18 | 1.11516638924029e-36 | 3.75744163190623e-32 |
| 73 | 11 | NPCc | Nephron progenitor cells c | wk13 | CENPV | 201161 | 29920 | 1 | 0.69 | 0.24 | 4.75342241957076e-34 | 1.60161815005017e-29 |
| 73 | 11 | NPCc | Nephron progenitor cells c | wk13 | MEOX1 | 4222 | 7013 | 0.97 | 0.36 | 0.01 | 1.60918365106881e-101 | 5.42198339391123e-97 |
| 73 | 11 | NPCc | Nephron progenitor cells c | wk13 | UHRF1 | 29128 | 12556 | 0.96 | 0.42 | 0.08 | 2.77156891387739e-35 | 9.33852429841847e-31 |
| 73 | 11 | NPCc | Nephron progenitor cells c | wk13 | HAS2 | 3037 | 4819 | 0.91 | 0.34 | 0.02 | 4.08975730713092e-68 | 1.37800282706469e-63 |
| 73 | 11 | NPCc | Nephron progenitor cells c | wk13 | PHLDA1 | 22822 | 8933 | 0.91 | 0.5 | 0.13 | 6.39519690201008e-31 | 2.15479764416327e-26 |
| 73 | 11 | NPCc | Nephron progenitor cells c | wk13 | PRXL2A | 84293 | 28651 | 0.9 | 0.76 | 0.39 | 2.76533830215017e-24 | 9.31753087526477e-20 |
| 73 | 11 | NPCc | Nephron progenitor cells c | wk13 | MCM7 | 4176 | 6950 | 0.87 | 0.55 | 0.23 | 4.8534136066986e-19 | 1.63530918064103e-14 |
| 73 | 11 | NPCc | Nephron progenitor cells c | wk13 | SLC15A1 | 6564 | 10920 | 0.86 | 0.3 | 0.02 | 4.43786605057034e-51 | 1.49529458707917e-46 |
| 73 | 11 | NPCc | Nephron progenitor cells c | wk13 | MARCKSL1 | 65108 | 7142 | 0.85 | 1 | 0.78 | 1.15521327100381e-37 | 3.89237559532023e-33 |
| 73 | 11 | NPCc | Nephron progenitor cells c | wk13 | CENPW | 387103 | 21488 | 0.84 | 0.38 | 0.08 | 7.96896920896601e-26 | 2.68506448526901e-21 |
| 73 | 11 | NPCc | Nephron progenitor cells c | wk13 | GINS2 | 51659 | 24575 | 0.84 | 0.4 | 0.09 | 7.61656204648733e-28 | 2.56632441594344e-23 |
| 73 | 11 | NPCc | Nephron progenitor cells c | wk13 | MEIS2 | 4212 | 7001 | 0.84 | 0.47 | 0.12 | 1.2895313401614e-27 | 4.34494689753983e-23 |
| 73 | 11 | NPCc | Nephron progenitor cells c | wk13 | FBLN1 | 2192 | 3600 | 0.83 | 0.5 | 0.16 | 8.72330828666613e-23 | 2.93923149410928e-18 |
| 73 | 11 | NPCc | Nephron progenitor cells c | wk13 | COL2A1 | 1280 | 2200 | 0.81 | 0.36 | 0.06 | 6.78007320096217e-32 | 2.28447786433219e-27 |
| 73 | 11 | NPCc | Nephron progenitor cells c | wk13 | COL9A2 | 1298 | 2218 | 0.79 | 0.32 | 0.03 | 1.22948156838242e-49 | 4.14261519650772e-45 |
| 73 | 11 | NPCc | Nephron progenitor cells c | wk13 | NCAM1 | 4684 | 7656 | 0.77 | 0.34 | 0.08 | 6.2356698109575e-21 | 2.10104658610402e-16 |
| 73 | 11 | NPCc | Nephron progenitor cells c | wk13 | MEIS1 | 4211 | 7000 | 0.76 | 0.33 | 0.07 | 3.2355211680578e-24 | 1.0901765023654e-19 |
| 73 | 11 | NPCc | Nephron progenitor cells c | wk13 | UNG | 7374 | 12572 | 0.76 | 0.45 | 0.15 | 4.61551496896969e-19 | 1.55515161364465e-14 |
| 73 | 11 | NPCc | Nephron progenitor cells c | wk13 | SEPTIN6 | 23157 | 15848 | 0.76 | 0.5 | 0.2 | 2.3240721413462e-17 | 7.8307286730519e-13 |
| 73 | 11 | NPCc | Nephron progenitor cells c | wk13 | UCHL1 | 7345 | 12513 | 0.74 | 0.49 | 0.19 | 6.97516876212654e-17 | 2.35021336271092e-12 |
| 73 | 11 | NPCc | Nephron progenitor cells c | wk13 | PCNA | 5111 | 8729 | 0.74 | 0.61 | 0.26 | 8.49119745565921e-19 | 2.86102407070981e-14 |
| 73 | 11 | NPCc | Nephron progenitor cells c | wk13 | MCM5 | 4174 | 6948 | 0.74 | 0.35 | 0.07 | 1.59152051777664e-25 | 5.36246923259662e-21 |
| 73 | 11 | NPCc | Nephron progenitor cells c | wk13 | SIX1 | 6495 | 10887 | 0.74 | 0.34 | 0.06 | 8.41606842444477e-29 | 2.83571009493242e-24 |
| 73 | 11 | NPCc | Nephron progenitor cells c | wk13 | MCM3 | 4172 | 6945 | 0.74 | 0.45 | 0.21 | 3.89625171024474e-12 | 1.31280305124986e-07 |
| 73 | 11 | NPCc | Nephron progenitor cells c | wk13 | NASP | 4678 | 7644 | 0.72 | 0.79 | 0.39 | 2.45350237153599e-22 | 8.26683089065338e-18 |
| 73 | 11 | NPCc | Nephron progenitor cells c | wk13 | WASF3 | 10810 | 12734 | 0.72 | 0.38 | 0.12 | 8.1350248440455e-16 | 2.74101527095269e-11 |
| 73 | 11 | NPCc | Nephron progenitor cells c | wk13 | MARCKS | 4082 | 6759 | 0.7 | 0.7 | 0.43 | 2.39559779434541e-14 | 8.07172720826741e-10 |
| 73 | 11 | NPCc | Nephron progenitor cells c | wk13 | ETV5 | 2119 | 3494 | 0.7 | 0.28 | 0.05 | 2.20585703007959e-25 | 7.43241467715016e-21 |
| 73 | 11 | NPCc | Nephron progenitor cells c | wk13 | HOXB9 | 3219 | 5120 | 0.7 | 0.32 | 0.07 | 2.18018194488018e-20 | 7.34590504507929e-16 |
| 73 | 11 | NPCc | Nephron progenitor cells c | wk13 | MAP1B | 4131 | 6836 | 0.69 | 0.41 | 0.14 | 8.65742705036206e-16 | 2.91703347034899e-11 |
| 73 | 11 | NPCc | Nephron progenitor cells c | wk13 | MLLT11 | 10962 | 16997 | 0.69 | 0.48 | 0.19 | 6.25332899133697e-16 | 2.10699667034108e-11 |
| 73 | 11 | NPCc | Nephron progenitor cells c | wk13 | NBL1 | 4681 | 7650 | 0.69 | 0.33 | 0.08 | 5.47102549650543e-21 | 1.84340733079254e-16 |
| 73 | 11 | NPCc | Nephron progenitor cells c | wk13 | NR2F1 | 7025 | 7975 | 0.69 | 0.52 | 0.27 | 9.66144948293144e-12 | 3.25532878877892e-07 |
| 73 | 11 | NPCc | Nephron progenitor cells c | wk13 | ITGA8 | 8516 | 6144 | 0.68 | 0.24 | 0.03 | 6.70310253104359e-31 | 2.25854336680983e-26 |
| 73 | 11 | NPCc | Nephron progenitor cells c | wk13 | PAX2 | 5076 | 8616 | 0.68 | 0.53 | 0.24 | 1.84751579092153e-14 | 6.225019705931e-10 |
| 73 | 11 | NPCc | Nephron progenitor cells c | wk13 | LMNB1 | 4001 | 6637 | 0.68 | 0.41 | 0.13 | 5.21298281057055e-18 | 1.75646242819364e-13 |
| 73 | 11 | NPCc | Nephron progenitor cells c | wk13 | NPM3 | 10360 | 7931 | 0.67 | 0.36 | 0.15 | 1.16953103785876e-10 | 3.94061787896132e-06 |
| 73 | 11 | NPCc | Nephron progenitor cells c | wk13 | HOXC6 | 3223 | 5128 | 0.67 | 0.32 | 0.07 | 8.71868389197463e-23 | 2.93767335056193e-18 |
| 73 | 11 | NPCc | Nephron progenitor cells c | wk13 | HES6 | 55502 | 18254 | 0.67 | 0.32 | 0.09 | 1.0438506071487e-15 | 3.51715023572684e-11 |
| 73 | 11 | NPCc | Nephron progenitor cells c | wk13 | TUBB | 203068 | 20778 | 0.67 | 0.98 | 0.86 | 2.13561092227793e-24 | 7.19572744152325e-20 |
| 73 | 11 | NPCc | Nephron progenitor cells c | wk13 | SHISA3 | 152573 | 25159 | 0.67 | 0.41 | 0.17 | 9.23289613085477e-12 | 3.11093202233021e-07 |
| 73 | 11 | NPCc | Nephron progenitor cells c | wk13 | NR2F2 | 7026 | 7976 | 0.67 | 0.7 | 0.45 | 7.10146452580291e-14 | 2.39276745732403e-09 |
| 73 | 11 | NPCc | Nephron progenitor cells c | wk13 | HMGB1 | 3146 | 4983 | 0.65 | 1 | 0.93 | 3.936874579042e-30 | 1.32649052066241e-25 |
| 73 | 11 | NPCc | Nephron progenitor cells c | wk13 | ECEL1 | 9427 | 3147 | 0.65 | 0.22 | 0.01 | 1.36310235909229e-61 | 4.59283708872555e-57 |
| 73 | 11 | NPCc | Nephron progenitor cells c | wk13 | NTRK2 | 4915 | 8032 | 0.64 | 0.62 | 0.35 | 2.89606986189165e-12 | 9.75801779265772e-08 |
| 73 | 11 | NPCc | Nephron progenitor cells c | wk13 | NPTX2 | 4885 | 7953 | 0.64 | 0.18 | 0.01 | 7.83216962106647e-41 | 2.63897123212214e-36 |
| 73 | 11 | NPCc | Nephron progenitor cells c | wk13 | SINHCAF | 58516 | 30702 | 0.63 | 0.74 | 0.42 | 3.58094067502036e-17 | 1.20656215104136e-12 |
| 73 | 11 | NPCc | Nephron progenitor cells c | wk13 | PCLAF | 9768 | 28961 | 0.63 | 0.38 | 0.18 | 3.7639937062154e-08 | 0.00126824003937222 |
| 73 | 11 | NPCc | Nephron progenitor cells c | wk13 | NAE1 | 8883 | 621 | 0.63 | 0.47 | 0.22 | 8.51911572026517e-13 | 2.87043085078615e-08 |
| 73 | 11 | NPCc | Nephron progenitor cells c | wk13 | TUBA1B | 10376 | 18809 | 0.63 | 0.99 | 0.78 | 2.45329687182189e-23 | 8.26613847991666e-19 |
| 73 | 11 | NPCc | Nephron progenitor cells c | wk13 | SCG5 | 6447 | 10816 | 0.62 | 0.33 | 0.09 | 3.22585661016414e-16 | 1.08692012622871e-11 |
| 73 | 11 | NPCc | Nephron progenitor cells c | wk13 | KIF26B | 55083 | 25484 | 0.62 | 0.17 | 0.01 | 2.46221784119217e-42 | 8.29619679411289e-38 |
| 73 | 11 | NPCc | Nephron progenitor cells c | wk13 | PCBP4 | 57060 | 8652 | 0.61 | 0.3 | 0.11 | 1.54603263254199e-11 | 5.20920235208698e-07 |
| 73 | 11 | NPCc | Nephron progenitor cells c | wk13 | CMTM7 | 112616 | 19178 | 0.61 | 0.25 | 0.09 | 1.82919966782511e-09 | 6.16330536076994e-05 |
| 73 | 11 | NPCc | Nephron progenitor cells c | wk13 | PAICS | 10606 | 8587 | 0.61 | 0.51 | 0.26 | 4.44040613792261e-12 | 1.49615044411164e-07 |
| 73 | 11 | NPCc | Nephron progenitor cells c | wk13 | IGF2-AS | 51214 | 14062 | 0.61 | 0.21 | 0.02 | 2.16858545153116e-26 | 7.30683182038911e-22 |
| 73 | 11 | NPCc | Nephron progenitor cells c | wk13 | HOXB-AS3 | 404266 | 40283 | 0.61 | 0.3 | 0.09 | 2.74547204365827e-13 | 9.25059350390218e-09 |
| 73 | 11 | NPCc | Nephron progenitor cells c | wk13 | PCDH18 | 54510 | 14268 | 0.61 | 0.23 | 0.03 | 8.1591199634228e-28 | 2.74913388047568e-23 |
| 73 | 11 | NPCc | Nephron progenitor cells c | wk13 | CLSPN | 63967 | 19715 | 0.6 | 0.21 | 0.04 | 5.28106988558325e-15 | 1.77940368724842e-10 |
| 73 | 11 | NPCc | Nephron progenitor cells c | wk13 | TRIL | 9865 | 22200 | 0.6 | 0.25 | 0.04 | 1.56281855295902e-24 | 5.26576083234012e-20 |
| 73 | 11 | NPCc | Nephron progenitor cells c | wk13 | CASC15 | 401237 | 28245 | 0.6 | 0.24 | 0.06 | 3.25239822054347e-14 | 1.09586305642992e-09 |
| 73 | 11 | NPCc | Nephron progenitor cells c | wk13 | MDK | 4192 | 6972 | 0.6 | 1 | 0.68 | 6.46642977204305e-21 | 2.17879884739218e-16 |
| 73 | 11 | NPCc | Nephron progenitor cells c | wk13 | TNFRSF19 | 55504 | 11915 | 0.59 | 0.31 | 0.1 | 1.61154525365226e-13 | 5.42994057765593e-09 |
| 73 | 11 | NPCc | Nephron progenitor cells c | wk13 | STMN1 | 3925 | 6510 | 0.59 | 1 | 0.95 | 2.336441170844e-26 | 7.87240488104177e-22 |
| 73 | 11 | NPCc | Nephron progenitor cells c | wk13 | NME1 | 4830 | 7849 | 0.59 | 0.61 | 0.38 | 5.1841533241616e-11 | 1.74674862104301e-06 |
| 73 | 11 | NPCc | Nephron progenitor cells c | wk13 | ISYNA1 | 51477 | 29821 | 0.59 | 0.4 | 0.18 | 1.59100371721453e-10 | 5.36072792478264e-06 |
| 73 | 11 | NPCc | Nephron progenitor cells c | wk13 | ENC1 | 8507 | 3345 | 0.59 | 0.35 | 0.13 | 2.68552096887598e-11 | 9.04859435253074e-07 |
| 73 | 11 | NPCc | Nephron progenitor cells c | wk13 | AP1S2 | 8905 | 560 | 0.58 | 0.33 | 0.13 | 4.59647839864399e-10 | 1.5487374316391e-05 |
| 73 | 11 | NPCc | Nephron progenitor cells c | wk13 | HTR2B | 3357 | 5294 | 0.58 | 0.14 | 0.01 | 7.41275732146652e-26 | 2.49765445189493e-21 |
| 73 | 11 | NPCc | Nephron progenitor cells c | wk13 | HOXB2 | 3212 | 5113 | 0.58 | 0.43 | 0.21 | 3.87229572011215e-10 | 1.30473131993459e-05 |
| 73 | 11 | NPCc | Nephron progenitor cells c | wk13 | SLC38A1 | 81539 | 13447 | 0.58 | 0.35 | 0.15 | 1.32691345868045e-09 | 4.47090220767792e-05 |
| 73 | 11 | NPCc | Nephron progenitor cells c | wk13 | DEK | 7913 | 2768 | 0.58 | 0.76 | 0.47 | 6.91639219697685e-14 | 2.33040918684938e-09 |
| 73 | 11 | NPCc | Nephron progenitor cells c | wk13 | ETV4 | 2118 | 3493 | 0.57 | 0.27 | 0.07 | 1.09981739465198e-15 | 3.70572472954037e-11 |
| 73 | 11 | NPCc | Nephron progenitor cells c | wk13 | CDH7 | 1005 | 1766 | 0.57 | 0.2 | 0.02 | 8.9198186292079e-29 | 3.00544368892531e-24 |
| 73 | 11 | NPCc | Nephron progenitor cells c | wk13 | ETV1 | 2115 | 3490 | 0.57 | 0.2 | 0.04 | 4.0532644871328e-14 | 1.36570693629452e-09 |
| 73 | 11 | NPCc | Nephron progenitor cells c | wk13 | REC8 | 9985 | 16879 | 0.57 | 0.35 | 0.11 | 1.16710310633549e-14 | 3.9324372064868e-10 |
| 73 | 11 | NPCc | Nephron progenitor cells c | wk13 | ANXA6 | 309 | 544 | 0.57 | 0.27 | 0.08 | 6.96654289634425e-14 | 2.34730696349423e-09 |
| 73 | 11 | NPCc | Nephron progenitor cells c | wk13 | PSIP1 | 11168 | 9527 | 0.56 | 0.7 | 0.48 | 1.89507122302895e-10 | 6.38525297887376e-06 |
| 73 | 11 | NPCc | Nephron progenitor cells c | wk13 | SYT1 | 6857 | 11509 | 0.56 | 0.21 | 0.05 | 4.48559779542636e-13 | 1.51137732119096e-08 |
| 73 | 11 | NPCc | Nephron progenitor cells c | wk13 | MMD | 23531 | 7153 | 0.56 | 0.22 | 0.03 | 1.78887908217386e-21 | 6.0274491794766e-17 |
| 73 | 11 | NPCc | Nephron progenitor cells c | wk13 | SMARCC1 | 6599 | 11104 | 0.56 | 0.59 | 0.32 | 9.58773398455704e-12 | 3.23049108875665e-07 |
| 73 | 11 | NPCc | Nephron progenitor cells c | wk13 | CADM1 | 23705 | 5951 | 0.55 | 0.53 | 0.32 | 1.3006233776591e-08 | 0.000438232040868458 |
| 73 | 11 | NPCc | Nephron progenitor cells c | wk13 | PDLIM1 | 9124 | 2067 | 0.55 | 0.35 | 0.14 | 2.13269001787338e-10 | 7.18588574622256e-06 |
| 73 | 11 | NPCc | Nephron progenitor cells c | wk13 | ACTL6A | 86 | 24124 | 0.55 | 0.43 | 0.24 | 6.16118856208838e-08 | 0.00207595087411006 |
| 73 | 11 | NPCc | Nephron progenitor cells c | wk13 | C1QTNF4 | 114900 | 14346 | 0.55 | 0.34 | 0.17 | 4.38593070841446e-07 | 0.01 |
| 73 | 11 | NPCc | Nephron progenitor cells c | wk13 | LAMA4 | 3910 | 6484 | 0.54 | 0.24 | 0.08 | 1.34154634992539e-09 | 4.52020627143859e-05 |
| 73 | 11 | NPCc | Nephron progenitor cells c | wk13 | HOXA10 | 3206 | 5100 | 0.54 | 0.61 | 0.44 | 3.93646020583942e-08 | 0.00132635090175553 |