Marker Genes
Dataset: Single-cell transcriptomics reveals gene expression dynamics of human fetal kidney development
- tissue: Kidney
- ontology: Kidney
- genotype: -
- stage: Fetal
- treatment condition: WT
- cell/nucleus: Cells
- pmid: 30789893
- subset name: wk13
- total genes: Not reported
- clustering: scran
- pseudotime: Monocle 2
- link: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE114530
Rows:100
dataset id | cluster id | cluster name | cell type name | sample id | gene symbol | entrez geneid | species specific geneid |
avg log fc (?)
|
pct 1 | pct 2 | p value | padj |
---|---|---|---|---|---|---|---|---|---|---|---|---|
73 | 10 | NPCb | Nephron progenitor cells b | wk13 | COL9A2 | 1298 | 2218 | 1.51 | 1 | 0.04 | 5.61014011537579e-22 | 1.89028061047472e-17 |
73 | 10 | NPCb | Nephron progenitor cells b | wk13 | MEIS1 | 4211 | 7000 | 1.5 | 0.75 | 0.07 | 1.22821692077973e-07 | 0.00413835409287521 |
73 | 10 | NPCb | Nephron progenitor cells b | wk13 | SIX1 | 6495 | 10887 | 1.42 | 0.75 | 0.07 | 4.23679974690803e-08 | 0.00142754730672319 |
73 | 10 | NPCb | Nephron progenitor cells b | wk13 | OVOS2 | 144203 | NULL | 1.37 | 0.75 | 0.03 | 2.2432508315638e-17 | 7.55840935187106e-13 |
73 | 10 | NPCb | Nephron progenitor cells b | wk13 | FAM43A | 131583 | 26888 | 1.36 | 0.5 | 0.03 | 2.33722139240821e-07 | 0.00787503375958023 |
73 | 10 | NPCb | Nephron progenitor cells b | wk13 | NAPB | 63908 | 15751 | 1.34 | 0.75 | 0.04 | 3.19009342992811e-13 | 1.07487008027998e-08 |
73 | 10 | NPCb | Nephron progenitor cells b | wk13 | POLD1 | 5424 | 9175 | 1.29 | 0.75 | 0.04 | 8.38005883550128e-12 | 2.8235770240338e-07 |
73 | 10 | NPCb | Nephron progenitor cells b | wk13 | PIM2 | 11040 | 8987 | 1.27 | 0.75 | 0.05 | 2.47915206802984e-10 | 8.35325497801973e-06 |
73 | 10 | NPCb | Nephron progenitor cells b | wk13 | CCDC88C | 440193 | 19967 | 1.24 | 0.75 | 0.03 | 2.41968433223556e-14 | 8.1528843890345e-10 |
73 | 10 | NPCb | Nephron progenitor cells b | wk13 | EPB41L4A-DT | 54508 | 25643 | 1.14 | 0.25 | 0.006 | 1.38839075777922e-10 | 4.67804381926132e-06 |
73 | 10 | NPCb | Nephron progenitor cells b | wk13 | TRMO | 51531 | 30967 | 1.14 | 0.75 | 0.05 | 1.09780282831236e-10 | 3.69893684971565e-06 |
73 | 10 | NPCb | Nephron progenitor cells b | wk13 | PCDH15 | 65217 | 14674 | 1.14 | 0.75 | 0.008 | 1.57760771083882e-56 | 5.31559142090031e-52 |
73 | 10 | NPCb | Nephron progenitor cells b | wk13 | RSPO3 | 84870 | 20866 | 1.14 | 0.75 | 0.03 | 1.43954208036051e-14 | 4.85039308556671e-10 |
73 | 10 | NPCb | Nephron progenitor cells b | wk13 | SNAI2 | 6591 | 11094 | 1.1 | 0.75 | 0.04 | 9.70188154094738e-13 | 3.26895196640681e-08 |
73 | 10 | NPCb | Nephron progenitor cells b | wk13 | UBE2L6 | 9246 | 12490 | 1.1 | 0.75 | 0.07 | 1.55260885422768e-07 | 0.00523136027343474 |
73 | 10 | NPCb | Nephron progenitor cells b | wk13 | SIX2 | 10736 | 10888 | 1.08 | 0.5 | 0.02 | 1.12257309244124e-09 | 3.78239777767151e-05 |
73 | 10 | NPCb | Nephron progenitor cells b | wk13 | MAP3K3 | 4215 | 6855 | 1.08 | 0.5 | 0.03 | 2.88762885752177e-08 | 0.000972957667253384 |
73 | 10 | NPCb | Nephron progenitor cells b | wk13 | FKBP5 | 2289 | 3721 | 1.07 | 0.5 | 0.03 | 3.45273306747497e-08 | 0.00116336387975502 |
73 | 10 | NPCb | Nephron progenitor cells b | wk13 | GTPBP3 | 84705 | 14880 | 1.06 | 0.75 | 0.08 | 1.26763763796202e-06 | 0.04 |
73 | 10 | NPCb | Nephron progenitor cells b | wk13 | TARSL2 | 123283 | 24728 | 1.05 | 0.75 | 0.04 | 8.89498481288998e-13 | 2.99707618285515e-08 |
73 | 10 | NPCb | Nephron progenitor cells b | wk13 | CNTLN | 54875 | 23432 | 1.03 | 0.75 | 0.04 | 2.84785767142939e-11 | 9.59557163811419e-07 |
73 | 10 | NPCb | Nephron progenitor cells b | wk13 | IGDCC3 | 9543 | 9700 | 1.03 | 0.5 | 0.02 | 3.92317640673188e-09 | 0.000132187505848424 |
73 | 10 | NPCb | Nephron progenitor cells b | wk13 | SHC4 | 399694 | 16743 | 1.03 | 0.25 | 0.007 | 1.12197390860809e-08 | 0.000378037888766408 |
73 | 10 | NPCb | Nephron progenitor cells b | wk13 | ZNF117 | 51351 | 12897 | 1.01 | 0.75 | 0.05 | 3.68304925896451e-09 | 0.00012409666173155 |
73 | 10 | NPCb | Nephron progenitor cells b | wk13 | RBM48 | 84060 | 21785 | 1 | 0.75 | 0.05 | 3.22628438967027e-09 | 0.00010870642622555 |
73 | 10 | NPCb | Nephron progenitor cells b | wk13 | CA7 | 766 | 1381 | 0.99 | 0.5 | 0.001 | 2.7169643771588e-149 | 9.15453977239886e-145 |
73 | 10 | NPCb | Nephron progenitor cells b | wk13 | RADIL | 55698 | 22226 | 0.97 | 0.5 | 0.007 | 1.01606458382412e-28 | 3.42352800873698e-24 |
73 | 10 | NPCb | Nephron progenitor cells b | wk13 | GPR89B | 51463 | 13840 | 0.97 | 0.75 | 0.06 | 1.0037092489108e-07 | 0.00338189794328004 |
73 | 10 | NPCb | Nephron progenitor cells b | wk13 | CS | 1431 | 2422 | 0.96 | 0.75 | 0.08 | 1.28101762710175e-06 | 0.04 |
73 | 10 | NPCb | Nephron progenitor cells b | wk13 | SETD9 | 133383 | 28508 | 0.93 | 0.75 | 0.06 | 2.89307503196875e-08 | 0.000974792701271552 |
73 | 10 | NPCb | Nephron progenitor cells b | wk13 | PTPRM | 5797 | 9675 | 0.92 | 0.5 | 0.02 | 2.88462758337737e-09 | 9.71946417943171e-05 |
73 | 10 | NPCb | Nephron progenitor cells b | wk13 | FAM110B | 90362 | 28587 | 0.92 | 0.75 | 0.07 | 3.69023717523404e-07 | 0.01 |
73 | 10 | NPCb | Nephron progenitor cells b | wk13 | MEX3D | 399664 | 16734 | 0.91 | 0.5 | 0.01 | 5.53430603109142e-12 | 1.86472907411594e-07 |
73 | 10 | NPCb | Nephron progenitor cells b | wk13 | FAM193A | 8603 | 16822 | 0.91 | 0.5 | 0.03 | 5.41380230342247e-08 | 0.00182412654811517 |
73 | 10 | NPCb | Nephron progenitor cells b | wk13 | MCCC2 | 64087 | 6937 | 0.91 | 0.75 | 0.07 | 6.5589007742466e-07 | 0.02 |
73 | 10 | NPCb | Nephron progenitor cells b | wk13 | UIMC1 | 51720 | 30298 | 0.91 | 0.75 | 0.07 | 8.30249921481067e-07 | 0.02 |
73 | 10 | NPCb | Nephron progenitor cells b | wk13 | MEOX1 | 4222 | 7013 | 0.87 | 0.5 | 0.02 | 8.35962878926678e-09 | 0.000281669332425555 |
73 | 10 | NPCb | Nephron progenitor cells b | wk13 | RFFL | 117584 | 24821 | 0.87 | 0.5 | 0.03 | 1.69067218594742e-07 | 0.00569655086333123 |
73 | 10 | NPCb | Nephron progenitor cells b | wk13 | TACC1 | 6867 | 11522 | 0.86 | 0.5 | 0.03 | 2.11833453742698e-07 | 0.00713751639040646 |
73 | 10 | NPCb | Nephron progenitor cells b | wk13 | HAS2 | 3037 | 4819 | 0.85 | 0.5 | 0.03 | 6.31950047628276e-07 | 0.02 |
73 | 10 | NPCb | Nephron progenitor cells b | wk13 | ENSG00000277597 | NULL | 0.74 | 0.5 | 0.001 | 1.72154711533648e-124 | 5.80058085041473e-120 | |
73 | 10 | NPCb | Nephron progenitor cells b | wk13 | LOC100506551 | 100506551 | NULL | 0.74 | 0.25 | 0 | 2.8800979579445e-186 | 9.70420205949819e-182 |
73 | 10 | NPCb | Nephron progenitor cells b | wk13 | MYLK2 | 85366 | 16243 | 0.74 | 0.5 | 0.003 | 1.77913227176754e-68 | 5.99460827649355e-64 |
73 | 10 | NPCb | Nephron progenitor cells b | wk13 | ENSG00000274695 | NULL | 0.74 | 0.25 | 0 | 5.42532825580947e-94 | 1.82801010251244e-89 | |
73 | 10 | NPCb | Nephron progenitor cells b | wk13 | ENSG00000272509 | NULL | 0.74 | 0.25 | 0 | 6.96829962727568e-94 | 2.34789887641427e-89 | |
73 | 10 | NPCb | Nephron progenitor cells b | wk13 | STARD5 | 80765 | 18065 | 0.74 | 0.5 | 0.003 | 6.36380952946014e-58 | 2.1442219828563e-53 |
73 | 10 | NPCb | Nephron progenitor cells b | wk13 | WASF3-AS1 | 100874061 | 39841 | 0.73 | 0.25 | 0.001 | 1.7826620404077e-38 | 6.0065014789497e-34 |
73 | 10 | NPCb | Nephron progenitor cells b | wk13 | PLXDC1 | 57125 | 20945 | 0.73 | 0.25 | 0.003 | 3.00087437013071e-18 | 1.01111461027184e-13 |
73 | 10 | NPCb | Nephron progenitor cells b | wk13 | RGMB-AS1 | 503569 | 48666 | 0.73 | 0.25 | 0.004 | 1.23020422086389e-15 | 4.14505010177878e-11 |
73 | 10 | NPCb | Nephron progenitor cells b | wk13 | RUNX2 | 860 | 10472 | 0.73 | 0.5 | 0.004 | 3.1965798438192e-47 | 1.07705561257644e-42 |
73 | 10 | NPCb | Nephron progenitor cells b | wk13 | PLAAT1 | 57110 | 14922 | 0.73 | 0.5 | 0.005 | 7.55890698525764e-40 | 2.54689811961271e-35 |
73 | 10 | NPCb | Nephron progenitor cells b | wk13 | EFCAB6 | 64800 | 24204 | 0.73 | 0.25 | 0.003 | 8.83821783769736e-17 | 2.97794911823375e-12 |
73 | 10 | NPCb | Nephron progenitor cells b | wk13 | ERCC6 | 2074 | 3438 | 0.73 | 0.5 | 0.006 | 1.06954522643898e-34 | 3.60372568596348e-30 |
73 | 10 | NPCb | Nephron progenitor cells b | wk13 | CPEB3 | 22849 | 21746 | 0.73 | 0.5 | 0.006 | 6.27867048623603e-32 | 2.11553523363237e-27 |
73 | 10 | NPCb | Nephron progenitor cells b | wk13 | DCLK1 | 9201 | 2700 | 0.73 | 0.5 | 0.007 | 2.0361926121049e-29 | 6.86074738722624e-25 |
73 | 10 | NPCb | Nephron progenitor cells b | wk13 | PPP1R27 | 116729 | 16813 | 0.72 | 0.25 | 0.005 | 1.32077713678899e-11 | 4.45022648469682e-07 |
73 | 10 | NPCb | Nephron progenitor cells b | wk13 | SNX22 | 79856 | 16315 | 0.72 | 0.5 | 0.007 | 2.46637538348258e-29 | 8.31020521710622e-25 |
73 | 10 | NPCb | Nephron progenitor cells b | wk13 | SRPX | 8406 | 11309 | 0.72 | 0.5 | 0.008 | 1.6545136432125e-26 | 5.57471826944021e-22 |
73 | 10 | NPCb | Nephron progenitor cells b | wk13 | ZMAT4 | 79698 | 25844 | 0.72 | 0.5 | 0.007 | 2.19851665466089e-29 | 7.4076820162144e-25 |
73 | 10 | NPCb | Nephron progenitor cells b | wk13 | SLCO5A1 | 81796 | 19046 | 0.72 | 0.5 | 0.01 | 1.57598091846206e-21 | 5.31011010666607e-17 |
73 | 10 | NPCb | Nephron progenitor cells b | wk13 | RYR1 | 6261 | 10483 | 0.72 | 0.25 | 0.006 | 1.51672228062003e-10 | 5.11044405232114e-06 |
73 | 10 | NPCb | Nephron progenitor cells b | wk13 | KBTBD11-OT1 | 104266957 | 49147 | 0.72 | 0.5 | 0.008 | 2.03359020809605e-26 | 6.85197884715882e-22 |
73 | 10 | NPCb | Nephron progenitor cells b | wk13 | IGSF11 | 152404 | 16669 | 0.72 | 0.25 | 0.008 | 4.08231873712265e-08 | 0.0013754964752861 |
73 | 10 | NPCb | Nephron progenitor cells b | wk13 | RHBDF2 | 79651 | 20788 | 0.72 | 0.5 | 0.01 | 5.10899235282455e-22 | 1.72142388336071e-17 |
73 | 10 | NPCb | Nephron progenitor cells b | wk13 | BRINP1 | 1620 | 2687 | 0.72 | 0.5 | 0.01 | 5.37810711430415e-21 | 1.81209941109364e-16 |
73 | 10 | NPCb | Nephron progenitor cells b | wk13 | GPR82 | 27197 | 4533 | 0.71 | 0.5 | 0.01 | 7.6164019082746e-20 | 2.56627045897404e-15 |
73 | 10 | NPCb | Nephron progenitor cells b | wk13 | NKD2 | 85409 | 17046 | 0.71 | 0.5 | 0.01 | 6.41235005709913e-22 | 2.16057722823898e-17 |
73 | 10 | NPCb | Nephron progenitor cells b | wk13 | SYNJ1 | 8867 | 11503 | 0.71 | 0.5 | 0.01 | 1.94971452821312e-19 | 6.5693681313613e-15 |
73 | 10 | NPCb | Nephron progenitor cells b | wk13 | ORC1 | 4998 | 8487 | 0.71 | 0.5 | 0.01 | 7.86365190663036e-18 | 2.64957887342003e-13 |
73 | 10 | NPCb | Nephron progenitor cells b | wk13 | ENSG00000179979 | NULL | 0.71 | 0.25 | 0.01 | 1.20400440683611e-06 | 0.04 | |
73 | 10 | NPCb | Nephron progenitor cells b | wk13 | CHRDL1 | 91851 | 29861 | 0.71 | 0.5 | 0.01 | 2.33482274502021e-17 | 7.86695175707109e-13 |
73 | 10 | NPCb | Nephron progenitor cells b | wk13 | MBNL1-AS1 | 401093 | 44584 | 0.71 | 0.5 | 0.01 | 2.90683401492561e-20 | 9.79428652989036e-16 |
73 | 10 | NPCb | Nephron progenitor cells b | wk13 | TMEM44 | 93109 | 25120 | 0.71 | 0.5 | 0.01 | 1.9125022810167e-15 | 6.44398518565768e-11 |
73 | 10 | NPCb | Nephron progenitor cells b | wk13 | ZNF585B | 92285 | 30948 | 0.71 | 0.5 | 0.01 | 5.38448343585899e-19 | 1.81424784887833e-14 |
73 | 10 | NPCb | Nephron progenitor cells b | wk13 | CACNB4 | 785 | 1404 | 0.71 | 0.5 | 0.01 | 1.10612715335598e-14 | 3.72698483051763e-10 |
73 | 10 | NPCb | Nephron progenitor cells b | wk13 | DKKL1 | 27120 | 16528 | 0.71 | 0.5 | 0.01 | 4.60193846305065e-18 | 1.55057714574029e-13 |
73 | 10 | NPCb | Nephron progenitor cells b | wk13 | ENSG00000271335 | NULL | 0.71 | 0.5 | 0.01 | 2.33482307717458e-17 | 7.86695287623202e-13 | |
73 | 10 | NPCb | Nephron progenitor cells b | wk13 | ADRB2 | 154 | 286 | 0.7 | 0.5 | 0.01 | 2.32470348634836e-15 | 7.83285592690218e-11 |
73 | 10 | NPCb | Nephron progenitor cells b | wk13 | MYO3A | 53904 | 7601 | 0.7 | 0.5 | 0.01 | 2.12238919177893e-14 | 7.15117814277992e-10 |
73 | 10 | NPCb | Nephron progenitor cells b | wk13 | FIZ1 | 84922 | 25917 | 0.69 | 0.5 | 0.01 | 2.34333475708141e-12 | 7.89563213051009e-08 |
73 | 10 | NPCb | Nephron progenitor cells b | wk13 | PSD4 | 23550 | 19096 | 0.69 | 0.5 | 0.02 | 2.13398771484264e-11 | 7.19025820639081e-07 |
73 | 10 | NPCb | Nephron progenitor cells b | wk13 | REM2 | 161253 | 20248 | 0.69 | 0.5 | 0.01 | 1.60940029660943e-13 | 5.42271335939581e-09 |
73 | 10 | NPCb | Nephron progenitor cells b | wk13 | CLCN2 | 1181 | 2020 | 0.69 | 0.5 | 0.02 | 4.09069421323572e-11 | 1.37831850820764e-06 |
73 | 10 | NPCb | Nephron progenitor cells b | wk13 | ENSG00000219159 | NULL | 0.68 | 0.5 | 0.02 | 2.82455514315115e-10 | 9.51705609933349e-06 | |
73 | 10 | NPCb | Nephron progenitor cells b | wk13 | RANBP17 | 64901 | 14428 | 0.68 | 0.5 | 0.02 | 4.76276951429882e-10 | 1.60476756014784e-05 |
73 | 10 | NPCb | Nephron progenitor cells b | wk13 | ACOT11 | 26027 | 18156 | 0.68 | 0.5 | 0.02 | 2.78889427279485e-10 | 9.39690036275496e-06 |
73 | 10 | NPCb | Nephron progenitor cells b | wk13 | TRAIP | 10293 | 30764 | 0.68 | 0.5 | 0.02 | 1.60758177714717e-08 | 0.000541658603991968 |
73 | 10 | NPCb | Nephron progenitor cells b | wk13 | RETSAT | 54884 | 25991 | 0.68 | 0.5 | 0.02 | 2.08670747208578e-10 | 7.03095215644583e-06 |
73 | 10 | NPCb | Nephron progenitor cells b | wk13 | UNC13B | 10497 | 12566 | 0.68 | 0.5 | 0.02 | 6.05122726756205e-10 | 2.03890051553236e-05 |
73 | 10 | NPCb | Nephron progenitor cells b | wk13 | ZNF18 | 7566 | 12969 | 0.68 | 0.5 | 0.02 | 8.02295326939431e-10 | 2.70325387458972e-05 |
73 | 10 | NPCb | Nephron progenitor cells b | wk13 | GNG7 | 2788 | 4410 | 0.68 | 0.5 | 0.02 | 6.2012334091985e-10 | 2.08944358489534e-05 |
73 | 10 | NPCb | Nephron progenitor cells b | wk13 | SWT1 | 54823 | 16785 | 0.68 | 0.5 | 0.02 | 3.08695366193441e-10 | 1.04011816685218e-05 |
73 | 10 | NPCb | Nephron progenitor cells b | wk13 | GRK4 | 2868 | 4543 | 0.68 | 0.5 | 0.02 | 1.13081428848822e-09 | 3.8101656636322e-05 |
73 | 10 | NPCb | Nephron progenitor cells b | wk13 | ZNF615 | 284370 | 24740 | 0.68 | 0.5 | 0.02 | 7.26856665811054e-10 | 2.44907084978377e-05 |
73 | 10 | NPCb | Nephron progenitor cells b | wk13 | ZNF701 | 55762 | 25597 | 0.67 | 0.5 | 0.02 | 9.49931704786133e-10 | 3.2006998861064e-05 |
73 | 10 | NPCb | Nephron progenitor cells b | wk13 | ZNF449 | 203523 | 21039 | 0.67 | 0.5 | 0.02 | 4.4957104835668e-10 | 1.514784690333e-05 |
73 | 10 | NPCb | Nephron progenitor cells b | wk13 | SPOCK3 | 50859 | 13565 | 0.67 | 0.5 | 0.02 | 1.14678339739648e-10 | 3.86397197918771e-06 |
73 | 10 | NPCb | Nephron progenitor cells b | wk13 | TRIM25 | 7706 | 12932 | 0.67 | 0.5 | 0.02 | 8.56581805899298e-09 | 0.000288616673679709 |
73 | 10 | NPCb | Nephron progenitor cells b | wk13 | LIFR-AS1 | 100506495 | 43600 | 0.67 | 0.5 | 0.02 | 1.34053386636128e-09 | 4.51679480931769e-05 |
73 | 10 | NPCb | Nephron progenitor cells b | wk13 | MAMSTR | 284358 | 26689 | 0.67 | 0.5 | 0.02 | 2.66380242637148e-09 | 8.97541589541605e-05 |