Marker Genes
Dataset: Single-cell transcriptomics reveals gene expression dynamics of human fetal kidney development
- tissue: Kidney
- ontology: Kidney
- genotype: -
- stage: Fetal
- treatment condition: WT
- cell/nucleus: Cells
- pmid: 30789893
- subset name: wk13
- total genes: Not reported
- clustering: scran
- pseudotime: Monocle 2
- link: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE114530
Rows:100
| dataset id | cluster id | cluster name | cell type name | sample id | gene symbol | entrez geneid | species specific geneid |
avg log fc (?)
|
pct 1 | pct 2 | p value | padj |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 73 | 10 | NPCb | Nephron progenitor cells b | wk13 | COL9A2 | 1298 | 2218 | 1.51 | 1 | 0.04 | 5.6101401153758E-22 | 1.8902806104747E-17 |
| 73 | 10 | NPCb | Nephron progenitor cells b | wk13 | MEIS1 | 4211 | 7000 | 1.5 | 0.75 | 0.07 | 1.2282169207797E-7 | 0.0041383540928752 |
| 73 | 10 | NPCb | Nephron progenitor cells b | wk13 | SIX1 | 6495 | 10887 | 1.42 | 0.75 | 0.07 | 4.236799746908E-8 | 0.0014275473067232 |
| 73 | 10 | NPCb | Nephron progenitor cells b | wk13 | OVOS2 | 144203 | NULL | 1.37 | 0.75 | 0.03 | 2.2432508315638E-17 | 7.5584093518711E-13 |
| 73 | 10 | NPCb | Nephron progenitor cells b | wk13 | FAM43A | 131583 | 26888 | 1.36 | 0.5 | 0.03 | 2.3372213924082E-7 | 0.0078750337595802 |
| 73 | 10 | NPCb | Nephron progenitor cells b | wk13 | NAPB | 63908 | 15751 | 1.34 | 0.75 | 0.04 | 3.1900934299281E-13 | 1.07487008028E-8 |
| 73 | 10 | NPCb | Nephron progenitor cells b | wk13 | POLD1 | 5424 | 9175 | 1.29 | 0.75 | 0.04 | 8.3800588355013E-12 | 2.8235770240338E-7 |
| 73 | 10 | NPCb | Nephron progenitor cells b | wk13 | PIM2 | 11040 | 8987 | 1.27 | 0.75 | 0.05 | 2.4791520680298E-10 | 8.3532549780197E-6 |
| 73 | 10 | NPCb | Nephron progenitor cells b | wk13 | CCDC88C | 440193 | 19967 | 1.24 | 0.75 | 0.03 | 2.4196843322356E-14 | 8.1528843890345E-10 |
| 73 | 10 | NPCb | Nephron progenitor cells b | wk13 | EPB41L4A-DT | 54508 | 25643 | 1.14 | 0.25 | 0.006 | 1.3883907577792E-10 | 4.6780438192613E-6 |
| 73 | 10 | NPCb | Nephron progenitor cells b | wk13 | TRMO | 51531 | 30967 | 1.14 | 0.75 | 0.05 | 1.0978028283124E-10 | 3.6989368497157E-6 |
| 73 | 10 | NPCb | Nephron progenitor cells b | wk13 | PCDH15 | 65217 | 14674 | 1.14 | 0.75 | 0.008 | 1.5776077108388E-56 | 5.3155914209003E-52 |
| 73 | 10 | NPCb | Nephron progenitor cells b | wk13 | RSPO3 | 84870 | 20866 | 1.14 | 0.75 | 0.03 | 1.4395420803605E-14 | 4.8503930855667E-10 |
| 73 | 10 | NPCb | Nephron progenitor cells b | wk13 | SNAI2 | 6591 | 11094 | 1.1 | 0.75 | 0.04 | 9.7018815409474E-13 | 3.2689519664068E-8 |
| 73 | 10 | NPCb | Nephron progenitor cells b | wk13 | UBE2L6 | 9246 | 12490 | 1.1 | 0.75 | 0.07 | 1.5526088542277E-7 | 0.0052313602734347 |
| 73 | 10 | NPCb | Nephron progenitor cells b | wk13 | SIX2 | 10736 | 10888 | 1.08 | 0.5 | 0.02 | 1.1225730924412E-9 | 3.7823977776715E-5 |
| 73 | 10 | NPCb | Nephron progenitor cells b | wk13 | MAP3K3 | 4215 | 6855 | 1.08 | 0.5 | 0.03 | 2.8876288575218E-8 | 0.00097295766725338 |
| 73 | 10 | NPCb | Nephron progenitor cells b | wk13 | FKBP5 | 2289 | 3721 | 1.07 | 0.5 | 0.03 | 3.452733067475E-8 | 0.001163363879755 |
| 73 | 10 | NPCb | Nephron progenitor cells b | wk13 | GTPBP3 | 84705 | 14880 | 1.06 | 0.75 | 0.08 | 1.267637637962E-6 | 0.04 |
| 73 | 10 | NPCb | Nephron progenitor cells b | wk13 | TARSL2 | 123283 | 24728 | 1.05 | 0.75 | 0.04 | 8.89498481289E-13 | 2.9970761828551E-8 |
| 73 | 10 | NPCb | Nephron progenitor cells b | wk13 | CNTLN | 54875 | 23432 | 1.03 | 0.75 | 0.04 | 2.8478576714294E-11 | 9.5955716381142E-7 |
| 73 | 10 | NPCb | Nephron progenitor cells b | wk13 | IGDCC3 | 9543 | 9700 | 1.03 | 0.5 | 0.02 | 3.9231764067319E-9 | 0.00013218750584842 |
| 73 | 10 | NPCb | Nephron progenitor cells b | wk13 | SHC4 | 399694 | 16743 | 1.03 | 0.25 | 0.007 | 1.1219739086081E-8 | 0.00037803788876641 |
| 73 | 10 | NPCb | Nephron progenitor cells b | wk13 | ZNF117 | 51351 | 12897 | 1.01 | 0.75 | 0.05 | 3.6830492589645E-9 | 0.00012409666173155 |
| 73 | 10 | NPCb | Nephron progenitor cells b | wk13 | RBM48 | 84060 | 21785 | 1 | 0.75 | 0.05 | 3.2262843896703E-9 | 0.00010870642622555 |
| 73 | 10 | NPCb | Nephron progenitor cells b | wk13 | CA7 | 766 | 1381 | 0.99 | 0.5 | 0.001 | 2.7169643771588E-149 | 9.1545397723989E-145 |
| 73 | 10 | NPCb | Nephron progenitor cells b | wk13 | RADIL | 55698 | 22226 | 0.97 | 0.5 | 0.007 | 1.0160645838241E-28 | 3.423528008737E-24 |
| 73 | 10 | NPCb | Nephron progenitor cells b | wk13 | GPR89B | 51463 | 13840 | 0.97 | 0.75 | 0.06 | 1.0037092489108E-7 | 0.00338189794328 |
| 73 | 10 | NPCb | Nephron progenitor cells b | wk13 | CS | 1431 | 2422 | 0.96 | 0.75 | 0.08 | 1.2810176271018E-6 | 0.04 |
| 73 | 10 | NPCb | Nephron progenitor cells b | wk13 | SETD9 | 133383 | 28508 | 0.93 | 0.75 | 0.06 | 2.8930750319687E-8 | 0.00097479270127155 |
| 73 | 10 | NPCb | Nephron progenitor cells b | wk13 | PTPRM | 5797 | 9675 | 0.92 | 0.5 | 0.02 | 2.8846275833774E-9 | 9.7194641794317E-5 |
| 73 | 10 | NPCb | Nephron progenitor cells b | wk13 | FAM110B | 90362 | 28587 | 0.92 | 0.75 | 0.07 | 3.690237175234E-7 | 0.01 |
| 73 | 10 | NPCb | Nephron progenitor cells b | wk13 | MEX3D | 399664 | 16734 | 0.91 | 0.5 | 0.01 | 5.5343060310914E-12 | 1.8647290741159E-7 |
| 73 | 10 | NPCb | Nephron progenitor cells b | wk13 | FAM193A | 8603 | 16822 | 0.91 | 0.5 | 0.03 | 5.4138023034225E-8 | 0.0018241265481152 |
| 73 | 10 | NPCb | Nephron progenitor cells b | wk13 | MCCC2 | 64087 | 6937 | 0.91 | 0.75 | 0.07 | 6.5589007742466E-7 | 0.02 |
| 73 | 10 | NPCb | Nephron progenitor cells b | wk13 | UIMC1 | 51720 | 30298 | 0.91 | 0.75 | 0.07 | 8.3024992148107E-7 | 0.02 |
| 73 | 10 | NPCb | Nephron progenitor cells b | wk13 | MEOX1 | 4222 | 7013 | 0.87 | 0.5 | 0.02 | 8.3596287892668E-9 | 0.00028166933242555 |
| 73 | 10 | NPCb | Nephron progenitor cells b | wk13 | RFFL | 117584 | 24821 | 0.87 | 0.5 | 0.03 | 1.6906721859474E-7 | 0.0056965508633312 |
| 73 | 10 | NPCb | Nephron progenitor cells b | wk13 | TACC1 | 6867 | 11522 | 0.86 | 0.5 | 0.03 | 2.118334537427E-7 | 0.0071375163904065 |
| 73 | 10 | NPCb | Nephron progenitor cells b | wk13 | HAS2 | 3037 | 4819 | 0.85 | 0.5 | 0.03 | 6.3195004762828E-7 | 0.02 |
| 73 | 10 | NPCb | Nephron progenitor cells b | wk13 | ENSG00000277597 | NULL | 0.74 | 0.5 | 0.001 | 1.7215471153365E-124 | 5.8005808504147E-120 | |
| 73 | 10 | NPCb | Nephron progenitor cells b | wk13 | LOC100506551 | 100506551 | NULL | 0.74 | 0.25 | 0 | 2.8800979579445E-186 | 9.7042020594982E-182 |
| 73 | 10 | NPCb | Nephron progenitor cells b | wk13 | MYLK2 | 85366 | 16243 | 0.74 | 0.5 | 0.003 | 1.7791322717675E-68 | 5.9946082764936E-64 |
| 73 | 10 | NPCb | Nephron progenitor cells b | wk13 | ENSG00000274695 | NULL | 0.74 | 0.25 | 0 | 5.4253282558095E-94 | 1.8280101025124E-89 | |
| 73 | 10 | NPCb | Nephron progenitor cells b | wk13 | ENSG00000272509 | NULL | 0.74 | 0.25 | 0 | 6.9682996272757E-94 | 2.3478988764143E-89 | |
| 73 | 10 | NPCb | Nephron progenitor cells b | wk13 | STARD5 | 80765 | 18065 | 0.74 | 0.5 | 0.003 | 6.3638095294601E-58 | 2.1442219828563E-53 |
| 73 | 10 | NPCb | Nephron progenitor cells b | wk13 | WASF3-AS1 | 100874061 | 39841 | 0.73 | 0.25 | 0.001 | 1.7826620404077E-38 | 6.0065014789497E-34 |
| 73 | 10 | NPCb | Nephron progenitor cells b | wk13 | PLXDC1 | 57125 | 20945 | 0.73 | 0.25 | 0.003 | 3.0008743701307E-18 | 1.0111146102718E-13 |
| 73 | 10 | NPCb | Nephron progenitor cells b | wk13 | RGMB-AS1 | 503569 | 48666 | 0.73 | 0.25 | 0.004 | 1.2302042208639E-15 | 4.1450501017788E-11 |
| 73 | 10 | NPCb | Nephron progenitor cells b | wk13 | RUNX2 | 860 | 10472 | 0.73 | 0.5 | 0.004 | 3.1965798438192E-47 | 1.0770556125764E-42 |
| 73 | 10 | NPCb | Nephron progenitor cells b | wk13 | PLAAT1 | 57110 | 14922 | 0.73 | 0.5 | 0.005 | 7.5589069852576E-40 | 2.5468981196127E-35 |
| 73 | 10 | NPCb | Nephron progenitor cells b | wk13 | EFCAB6 | 64800 | 24204 | 0.73 | 0.25 | 0.003 | 8.8382178376974E-17 | 2.9779491182337E-12 |
| 73 | 10 | NPCb | Nephron progenitor cells b | wk13 | ERCC6 | 2074 | 3438 | 0.73 | 0.5 | 0.006 | 1.069545226439E-34 | 3.6037256859635E-30 |
| 73 | 10 | NPCb | Nephron progenitor cells b | wk13 | CPEB3 | 22849 | 21746 | 0.73 | 0.5 | 0.006 | 6.278670486236E-32 | 2.1155352336324E-27 |
| 73 | 10 | NPCb | Nephron progenitor cells b | wk13 | DCLK1 | 9201 | 2700 | 0.73 | 0.5 | 0.007 | 2.0361926121049E-29 | 6.8607473872262E-25 |
| 73 | 10 | NPCb | Nephron progenitor cells b | wk13 | PPP1R27 | 116729 | 16813 | 0.72 | 0.25 | 0.005 | 1.320777136789E-11 | 4.4502264846968E-7 |
| 73 | 10 | NPCb | Nephron progenitor cells b | wk13 | SNX22 | 79856 | 16315 | 0.72 | 0.5 | 0.007 | 2.4663753834826E-29 | 8.3102052171062E-25 |
| 73 | 10 | NPCb | Nephron progenitor cells b | wk13 | SRPX | 8406 | 11309 | 0.72 | 0.5 | 0.008 | 1.6545136432125E-26 | 5.5747182694402E-22 |
| 73 | 10 | NPCb | Nephron progenitor cells b | wk13 | ZMAT4 | 79698 | 25844 | 0.72 | 0.5 | 0.007 | 2.1985166546609E-29 | 7.4076820162144E-25 |
| 73 | 10 | NPCb | Nephron progenitor cells b | wk13 | SLCO5A1 | 81796 | 19046 | 0.72 | 0.5 | 0.01 | 1.5759809184621E-21 | 5.3101101066661E-17 |
| 73 | 10 | NPCb | Nephron progenitor cells b | wk13 | RYR1 | 6261 | 10483 | 0.72 | 0.25 | 0.006 | 1.51672228062E-10 | 5.1104440523211E-6 |
| 73 | 10 | NPCb | Nephron progenitor cells b | wk13 | KBTBD11-OT1 | 104266957 | 49147 | 0.72 | 0.5 | 0.008 | 2.033590208096E-26 | 6.8519788471588E-22 |
| 73 | 10 | NPCb | Nephron progenitor cells b | wk13 | IGSF11 | 152404 | 16669 | 0.72 | 0.25 | 0.008 | 4.0823187371227E-8 | 0.0013754964752861 |
| 73 | 10 | NPCb | Nephron progenitor cells b | wk13 | RHBDF2 | 79651 | 20788 | 0.72 | 0.5 | 0.01 | 5.1089923528246E-22 | 1.7214238833607E-17 |
| 73 | 10 | NPCb | Nephron progenitor cells b | wk13 | BRINP1 | 1620 | 2687 | 0.72 | 0.5 | 0.01 | 5.3781071143042E-21 | 1.8120994110936E-16 |
| 73 | 10 | NPCb | Nephron progenitor cells b | wk13 | GPR82 | 27197 | 4533 | 0.71 | 0.5 | 0.01 | 7.6164019082746E-20 | 2.566270458974E-15 |
| 73 | 10 | NPCb | Nephron progenitor cells b | wk13 | NKD2 | 85409 | 17046 | 0.71 | 0.5 | 0.01 | 6.4123500570991E-22 | 2.160577228239E-17 |
| 73 | 10 | NPCb | Nephron progenitor cells b | wk13 | SYNJ1 | 8867 | 11503 | 0.71 | 0.5 | 0.01 | 1.9497145282131E-19 | 6.5693681313613E-15 |
| 73 | 10 | NPCb | Nephron progenitor cells b | wk13 | ORC1 | 4998 | 8487 | 0.71 | 0.5 | 0.01 | 7.8636519066304E-18 | 2.64957887342E-13 |
| 73 | 10 | NPCb | Nephron progenitor cells b | wk13 | ENSG00000179979 | NULL | 0.71 | 0.25 | 0.01 | 1.2040044068361E-6 | 0.04 | |
| 73 | 10 | NPCb | Nephron progenitor cells b | wk13 | CHRDL1 | 91851 | 29861 | 0.71 | 0.5 | 0.01 | 2.3348227450202E-17 | 7.8669517570711E-13 |
| 73 | 10 | NPCb | Nephron progenitor cells b | wk13 | MBNL1-AS1 | 401093 | 44584 | 0.71 | 0.5 | 0.01 | 2.9068340149256E-20 | 9.7942865298904E-16 |
| 73 | 10 | NPCb | Nephron progenitor cells b | wk13 | TMEM44 | 93109 | 25120 | 0.71 | 0.5 | 0.01 | 1.9125022810167E-15 | 6.4439851856577E-11 |
| 73 | 10 | NPCb | Nephron progenitor cells b | wk13 | ZNF585B | 92285 | 30948 | 0.71 | 0.5 | 0.01 | 5.384483435859E-19 | 1.8142478488783E-14 |
| 73 | 10 | NPCb | Nephron progenitor cells b | wk13 | CACNB4 | 785 | 1404 | 0.71 | 0.5 | 0.01 | 1.106127153356E-14 | 3.7269848305176E-10 |
| 73 | 10 | NPCb | Nephron progenitor cells b | wk13 | DKKL1 | 27120 | 16528 | 0.71 | 0.5 | 0.01 | 4.6019384630507E-18 | 1.5505771457403E-13 |
| 73 | 10 | NPCb | Nephron progenitor cells b | wk13 | ENSG00000271335 | NULL | 0.71 | 0.5 | 0.01 | 2.3348230771746E-17 | 7.866952876232E-13 | |
| 73 | 10 | NPCb | Nephron progenitor cells b | wk13 | ADRB2 | 154 | 286 | 0.7 | 0.5 | 0.01 | 2.3247034863484E-15 | 7.8328559269022E-11 |
| 73 | 10 | NPCb | Nephron progenitor cells b | wk13 | MYO3A | 53904 | 7601 | 0.7 | 0.5 | 0.01 | 2.1223891917789E-14 | 7.1511781427799E-10 |
| 73 | 10 | NPCb | Nephron progenitor cells b | wk13 | FIZ1 | 84922 | 25917 | 0.69 | 0.5 | 0.01 | 2.3433347570814E-12 | 7.8956321305101E-8 |
| 73 | 10 | NPCb | Nephron progenitor cells b | wk13 | PSD4 | 23550 | 19096 | 0.69 | 0.5 | 0.02 | 2.1339877148426E-11 | 7.1902582063908E-7 |
| 73 | 10 | NPCb | Nephron progenitor cells b | wk13 | REM2 | 161253 | 20248 | 0.69 | 0.5 | 0.01 | 1.6094002966094E-13 | 5.4227133593958E-9 |
| 73 | 10 | NPCb | Nephron progenitor cells b | wk13 | CLCN2 | 1181 | 2020 | 0.69 | 0.5 | 0.02 | 4.0906942132357E-11 | 1.3783185082076E-6 |
| 73 | 10 | NPCb | Nephron progenitor cells b | wk13 | ENSG00000219159 | NULL | 0.68 | 0.5 | 0.02 | 2.8245551431511E-10 | 9.5170560993335E-6 | |
| 73 | 10 | NPCb | Nephron progenitor cells b | wk13 | RANBP17 | 64901 | 14428 | 0.68 | 0.5 | 0.02 | 4.7627695142988E-10 | 1.6047675601478E-5 |
| 73 | 10 | NPCb | Nephron progenitor cells b | wk13 | ACOT11 | 26027 | 18156 | 0.68 | 0.5 | 0.02 | 2.7888942727949E-10 | 9.396900362755E-6 |
| 73 | 10 | NPCb | Nephron progenitor cells b | wk13 | TRAIP | 10293 | 30764 | 0.68 | 0.5 | 0.02 | 1.6075817771472E-8 | 0.00054165860399197 |
| 73 | 10 | NPCb | Nephron progenitor cells b | wk13 | RETSAT | 54884 | 25991 | 0.68 | 0.5 | 0.02 | 2.0867074720858E-10 | 7.0309521564458E-6 |
| 73 | 10 | NPCb | Nephron progenitor cells b | wk13 | UNC13B | 10497 | 12566 | 0.68 | 0.5 | 0.02 | 6.051227267562E-10 | 2.0389005155324E-5 |
| 73 | 10 | NPCb | Nephron progenitor cells b | wk13 | ZNF18 | 7566 | 12969 | 0.68 | 0.5 | 0.02 | 8.0229532693943E-10 | 2.7032538745897E-5 |
| 73 | 10 | NPCb | Nephron progenitor cells b | wk13 | GNG7 | 2788 | 4410 | 0.68 | 0.5 | 0.02 | 6.2012334091985E-10 | 2.0894435848953E-5 |
| 73 | 10 | NPCb | Nephron progenitor cells b | wk13 | SWT1 | 54823 | 16785 | 0.68 | 0.5 | 0.02 | 3.0869536619344E-10 | 1.0401181668522E-5 |
| 73 | 10 | NPCb | Nephron progenitor cells b | wk13 | GRK4 | 2868 | 4543 | 0.68 | 0.5 | 0.02 | 1.1308142884882E-9 | 3.8101656636322E-5 |
| 73 | 10 | NPCb | Nephron progenitor cells b | wk13 | ZNF615 | 284370 | 24740 | 0.68 | 0.5 | 0.02 | 7.2685666581105E-10 | 2.4490708497838E-5 |
| 73 | 10 | NPCb | Nephron progenitor cells b | wk13 | ZNF701 | 55762 | 25597 | 0.67 | 0.5 | 0.02 | 9.4993170478613E-10 | 3.2006998861064E-5 |
| 73 | 10 | NPCb | Nephron progenitor cells b | wk13 | ZNF449 | 203523 | 21039 | 0.67 | 0.5 | 0.02 | 4.4957104835668E-10 | 1.514784690333E-5 |
| 73 | 10 | NPCb | Nephron progenitor cells b | wk13 | SPOCK3 | 50859 | 13565 | 0.67 | 0.5 | 0.02 | 1.1467833973965E-10 | 3.8639719791877E-6 |
| 73 | 10 | NPCb | Nephron progenitor cells b | wk13 | TRIM25 | 7706 | 12932 | 0.67 | 0.5 | 0.02 | 8.565818058993E-9 | 0.00028861667367971 |
| 73 | 10 | NPCb | Nephron progenitor cells b | wk13 | LIFR-AS1 | 100506495 | 43600 | 0.67 | 0.5 | 0.02 | 1.3405338663613E-9 | 4.5167948093177E-5 |
| 73 | 10 | NPCb | Nephron progenitor cells b | wk13 | MAMSTR | 284358 | 26689 | 0.67 | 0.5 | 0.02 | 2.6638024263715E-9 | 8.975415895416E-5 |