Marker Genes
Dataset: Single-cell transcriptomics reveals gene expression dynamics of human fetal kidney development
- tissue: Kidney
- ontology: Kidney
- genotype: -
- stage: Fetal
- treatment condition: WT
- cell/nucleus: Cells
- pmid: 30789893
- subset name: wk13
- total genes: Not reported
- clustering: scran
- pseudotime: Monocle 2
- link: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE114530
Rows:100
| dataset id | cluster id | cluster name | cell type name | sample id | gene symbol | entrez geneid | species specific geneid |
avg log fc (?)
|
pct 1 | pct 2 | p value | padj |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 73 | 0 | CnT | Connecting tubule | wk13 | GATA3 | 2625 | 4172 | 2.12 | 1 | 0.01 | 8.1961852575959E-66 | 2.7616226606944E-61 |
| 73 | 0 | CnT | Connecting tubule | wk13 | TBX3 | 6926 | 11602 | 1.73 | 0.5 | 0.01 | 7.2850524683894E-25 | 2.4546255786991E-20 |
| 73 | 0 | CnT | Connecting tubule | wk13 | ALDH1A1 | 216 | 402 | 1.61 | 1 | 0.17 | 1.6106928469239E-9 | 5.4270684784252E-5 |
| 73 | 0 | CnT | Connecting tubule | wk13 | WFDC2 | 10406 | 15939 | 1.61 | 0.83 | 0.16 | 5.7034643714219E-7 | 0.01 |
| 73 | 0 | CnT | Connecting tubule | wk13 | AURKC | 6795 | 11391 | 1.43 | 1 | 0.01 | 4.3746662983388E-85 | 1.4740000625623E-80 |
| 73 | 0 | CnT | Connecting tubule | wk13 | TMEM52B | 120939 | 26438 | 1.4 | 0.33 | 0.01 | 1.9543496558835E-10 | 6.5849857305339E-6 |
| 73 | 0 | CnT | Connecting tubule | wk13 | ADH1C | 126 | 251 | 1.34 | 0.5 | 0.008 | 6.1690293224542E-37 | 2.0785927399077E-32 |
| 73 | 0 | CnT | Connecting tubule | wk13 | ELF3 | 1999 | 3318 | 1.31 | 1 | 0.21 | 3.3617755559997E-7 | 0.01 |
| 73 | 0 | CnT | Connecting tubule | wk13 | RCBTB1 | 55213 | 18243 | 1.23 | 0.83 | 0.04 | 3.5263036867596E-19 | 1.1881527642168E-14 |
| 73 | 0 | CnT | Connecting tubule | wk13 | TMEM45B | 120224 | 25194 | 1.2 | 0.33 | 0.004 | 5.0902212733299E-32 | 1.7150991558358E-27 |
| 73 | 0 | CnT | Connecting tubule | wk13 | RHOD | 29984 | 670 | 1.2 | 0.66 | 0.02 | 1.8514695028598E-23 | 6.2383413429357E-19 |
| 73 | 0 | CnT | Connecting tubule | wk13 | AP3B1 | 8546 | 566 | 1.18 | 1 | 0.1 | 1.0439560961923E-12 | 3.5175056705104E-8 |
| 73 | 0 | CnT | Connecting tubule | wk13 | RILPL2 | 196383 | 28787 | 1.17 | 0.66 | 0.07 | 3.9137906723795E-8 | 0.0013187126291515 |
| 73 | 0 | CnT | Connecting tubule | wk13 | TFAP2A | 7020 | 11742 | 1.15 | 0.5 | 0.03 | 3.4463551753899E-11 | 1.1612149127959E-6 |
| 73 | 0 | CnT | Connecting tubule | wk13 | SLC12A2 | 6558 | 10911 | 1.15 | 0.83 | 0.1 | 7.0820811560412E-10 | 2.3862364247165E-5 |
| 73 | 0 | CnT | Connecting tubule | wk13 | ALKAL2 | 285016 | 27683 | 1.14 | 0.33 | 0.01 | 1.7660629372594E-10 | 5.9505724608018E-6 |
| 73 | 0 | CnT | Connecting tubule | wk13 | SART3 | 9733 | 16860 | 1.14 | 0.66 | 0.09 | 8.7202947615149E-7 | 0.02 |
| 73 | 0 | CnT | Connecting tubule | wk13 | PKHD1 | 5314 | 9016 | 1.14 | 0.66 | 0.04 | 2.424344993997E-14 | 8.1685880227734E-10 |
| 73 | 0 | CnT | Connecting tubule | wk13 | PIK3C2G | 5288 | 8973 | 1.13 | 0.5 | 0.001 | 1.4085244808545E-159 | 4.745882385791E-155 |
| 73 | 0 | CnT | Connecting tubule | wk13 | CYB5R2 | 51700 | 24376 | 1.12 | 0.66 | 0.02 | 5.7114894954772E-20 | 1.9244292706061E-15 |
| 73 | 0 | CnT | Connecting tubule | wk13 | KLF5 | 688 | 6349 | 1.12 | 1 | 0.11 | 1.1420147036953E-11 | 3.8479043426308E-7 |
| 73 | 0 | CnT | Connecting tubule | wk13 | C15orf65 | 145788 | 44654 | 1.12 | 0.66 | 0.04 | 1.3269781103698E-12 | 4.4711200450801E-8 |
| 73 | 0 | CnT | Connecting tubule | wk13 | GATA2 | 2624 | 4171 | 1.11 | 0.33 | 0.01 | 1.3113958087468E-11 | 4.4186170379914E-7 |
| 73 | 0 | CnT | Connecting tubule | wk13 | PRELID3A | 10650 | 24639 | 1.1 | 0.66 | 0.02 | 1.9988432719304E-24 | 6.7349025204424E-20 |
| 73 | 0 | CnT | Connecting tubule | wk13 | GOLGA1 | 2800 | 4424 | 1.1 | 0.66 | 0.02 | 1.3013288868144E-23 | 4.3846975512326E-19 |
| 73 | 0 | CnT | Connecting tubule | wk13 | LOC441179 | 441179 | NULL | 1.07 | 0.5 | 0.005 | 7.4218196119972E-57 | 2.5007079000664E-52 |
| 73 | 0 | CnT | Connecting tubule | wk13 | RHBDF2 | 79651 | 20788 | 1.05 | 0.66 | 0.009 | 4.2811691597802E-57 | 1.4424971366963E-52 |
| 73 | 0 | CnT | Connecting tubule | wk13 | RPAP3 | 79657 | 26151 | 1.04 | 0.66 | 0.09 | 2.854589998751E-7 | 0.0096182555417917 |
| 73 | 0 | CnT | Connecting tubule | wk13 | KCTD12 | 115207 | 14678 | 1.04 | 0.66 | 0.07 | 1.7557848648094E-8 | 0.00059159415234889 |
| 73 | 0 | CnT | Connecting tubule | wk13 | CMTM8 | 152189 | 19179 | 1.04 | 0.66 | 0.09 | 3.1367419600199E-7 | 0.01 |
| 73 | 0 | CnT | Connecting tubule | wk13 | CRABP1 | 1381 | 2338 | 1.03 | 0.33 | 0.01 | 7.4954557368821E-9 | 0.00025255188559851 |
| 73 | 0 | CnT | Connecting tubule | wk13 | ANXA3 | 306 | 541 | 1.02 | 0.5 | 0.05 | 1.0976629119254E-6 | 0.03 |
| 73 | 0 | CnT | Connecting tubule | wk13 | SLC25A42 | 284439 | 28380 | 1.02 | 0.66 | 0.05 | 1.2308947719611E-11 | 4.1473768446456E-7 |
| 73 | 0 | CnT | Connecting tubule | wk13 | STXBP6 | 29091 | 19666 | 1.01 | 0.5 | 0.01 | 1.6755224090162E-27 | 5.645505204939E-23 |
| 73 | 0 | CnT | Connecting tubule | wk13 | NAA30 | 122830 | 19844 | 1 | 0.66 | 0.09 | 7.4228506843162E-7 | 0.02 |
| 73 | 0 | CnT | Connecting tubule | wk13 | ZNF136 | 7695 | 12920 | 1 | 0.66 | 0.06 | 4.5290576944043E-10 | 1.5260206995526E-5 |
| 73 | 0 | CnT | Connecting tubule | wk13 | WWOX | 51741 | 12799 | 0.99 | 0.66 | 0.06 | 1.3670684481132E-9 | 4.6062004290725E-5 |
| 73 | 0 | CnT | Connecting tubule | wk13 | TUBA4A | 7277 | 12407 | 0.99 | 0.5 | 0.04 | 6.8481834339332E-8 | 0.0023074269262294 |
| 73 | 0 | CnT | Connecting tubule | wk13 | ARHGAP4 | 393 | 674 | 0.98 | 0.5 | 0.01 | 4.22293015035E-17 | 1.4228740848589E-12 |
| 73 | 0 | CnT | Connecting tubule | wk13 | BCAT1 | 586 | 976 | 0.97 | 0.5 | 0.02 | 2.2926817095549E-14 | 7.7249617521742E-10 |
| 73 | 0 | CnT | Connecting tubule | wk13 | ELOVL7 | 79993 | 26292 | 0.95 | 0.5 | 0.02 | 2.2169577016153E-13 | 7.4698172798226E-9 |
| 73 | 0 | CnT | Connecting tubule | wk13 | SLC35G1 | 159371 | 26607 | 0.95 | 0.66 | 0.03 | 4.5984977759156E-15 | 1.549417840617E-10 |
| 73 | 0 | CnT | Connecting tubule | wk13 | EDN3 | 1908 | 3178 | 0.95 | 0.33 | 0.003 | 1.8463346748713E-42 | 6.2210400535113E-38 |
| 73 | 0 | CnT | Connecting tubule | wk13 | FAM118A | 55007 | 1313 | 0.94 | 0.83 | 0.13 | 5.2185193455734E-7 | 0.01 |
| 73 | 0 | CnT | Connecting tubule | wk13 | NEO1 | 4756 | 7754 | 0.93 | 0.66 | 0.08 | 4.5747840774901E-7 | 0.01 |
| 73 | 0 | CnT | Connecting tubule | wk13 | ABCF3 | 55324 | 72 | 0.93 | 0.66 | 0.05 | 1.0109410332828E-11 | 3.406264717543E-7 |
| 73 | 0 | CnT | Connecting tubule | wk13 | AGR2 | 10551 | 328 | 0.93 | 0.5 | 0.003 | 2.0665103282335E-93 | 6.9628998999498E-89 |
| 73 | 0 | CnT | Connecting tubule | wk13 | SLC7A2 | 6542 | 11060 | 0.92 | 0.5 | 0.03 | 2.2616665347438E-9 | 7.6204592221659E-5 |
| 73 | 0 | CnT | Connecting tubule | wk13 | RFWD3 | 55159 | 25539 | 0.92 | 0.5 | 0.03 | 1.9862051809891E-9 | 6.6923197368245E-5 |
| 73 | 0 | CnT | Connecting tubule | wk13 | IFT122 | 55764 | 13556 | 0.92 | 0.66 | 0.05 | 1.7068233989981E-10 | 5.7509707605844E-6 |
| 73 | 0 | CnT | Connecting tubule | wk13 | MCM3AP | 8888 | 6946 | 0.92 | 0.66 | 0.05 | 1.3970852395891E-10 | 4.7073390062715E-6 |
| 73 | 0 | CnT | Connecting tubule | wk13 | PKIA | 5569 | 9017 | 0.9 | 0.5 | 0.04 | 2.4326498743159E-7 | 0.0081965704865199 |
| 73 | 0 | CnT | Connecting tubule | wk13 | ACSS3 | 79611 | 24723 | 0.88 | 0.5 | 0.01 | 2.8152355864023E-17 | 9.485654784824E-13 |
| 73 | 0 | CnT | Connecting tubule | wk13 | PLPP2 | 8612 | 9230 | 0.87 | 0.33 | 0.004 | 4.3080846096096E-32 | 1.4515660283618E-27 |
| 73 | 0 | CnT | Connecting tubule | wk13 | CAPG | 822 | 1474 | 0.87 | 0.5 | 0.04 | 2.9531393418832E-7 | 0.0099503076985411 |
| 73 | 0 | CnT | Connecting tubule | wk13 | ZNF792 | 126375 | 24751 | 0.86 | 0.33 | 0.006 | 1.3242460959728E-23 | 4.4619147957708E-19 |
| 73 | 0 | CnT | Connecting tubule | wk13 | CAPN12 | 147968 | 13249 | 0.86 | 0.5 | 0.02 | 6.198061167993E-12 | 2.0883747299436E-7 |
| 73 | 0 | CnT | Connecting tubule | wk13 | ENSG00000237753 | NULL | 0.86 | 0.33 | 0.009 | 3.8690094287801E-17 | 1.3036240369332E-12 | |
| 73 | 0 | CnT | Connecting tubule | wk13 | ENSG00000225177 | NULL | 0.85 | 0.33 | 0.01 | 2.7422091277294E-15 | 9.2395994349715E-11 | |
| 73 | 0 | CnT | Connecting tubule | wk13 | ME3 | 10873 | 6985 | 0.85 | 0.33 | 0.01 | 6.7670691668023E-13 | 2.2800962850624E-8 |
| 73 | 0 | CnT | Connecting tubule | wk13 | CLDN14 | 23562 | 2035 | 0.84 | 0.33 | 0.01 | 2.1498955890063E-11 | 7.2438581975979E-7 |
| 73 | 0 | CnT | Connecting tubule | wk13 | RASSF6 | 166824 | 20796 | 0.84 | 0.33 | 0.01 | 2.4368896050214E-11 | 8.2108558351591E-7 |
| 73 | 0 | CnT | Connecting tubule | wk13 | KNTC1 | 9735 | 17255 | 0.83 | 0.33 | 0.01 | 6.1476013402828E-9 | 0.00020713727955949 |
| 73 | 0 | CnT | Connecting tubule | wk13 | MVB12B | 89853 | 23368 | 0.83 | 0.33 | 0.01 | 1.4665217370542E-9 | 4.9412983408302E-5 |
| 73 | 0 | CnT | Connecting tubule | wk13 | LCN12 | 286256 | 28733 | 0.83 | 0.33 | 0.01 | 7.1523757465609E-10 | 2.4099214840462E-5 |
| 73 | 0 | CnT | Connecting tubule | wk13 | FAM171B | 165215 | 29412 | 0.83 | 0.33 | 0.01 | 9.0043379496073E-9 | 0.00030339216287407 |
| 73 | 0 | CnT | Connecting tubule | wk13 | CCNQ | 92002 | 28434 | 0.83 | 0.66 | 0.09 | 1.2689268397743E-6 | 0.04 |
| 73 | 0 | CnT | Connecting tubule | wk13 | NCKIPSD | 51517 | 15486 | 0.82 | 0.33 | 0.02 | 4.3427435129107E-7 | 0.01 |
| 73 | 0 | CnT | Connecting tubule | wk13 | FBXL7 | 23194 | 13604 | 0.81 | 0.33 | 0.02 | 1.3537651466201E-7 | 0.0045613762850216 |
| 73 | 0 | CnT | Connecting tubule | wk13 | TOR1B | 27348 | 11995 | 0.81 | 0.33 | 0.02 | 1.2816467317433E-6 | 0.04 |
| 73 | 0 | CnT | Connecting tubule | wk13 | RTL5 | 340526 | 29430 | 0.8 | 0.33 | 0.02 | 1.0677061912774E-6 | 0.03 |
| 73 | 0 | CnT | Connecting tubule | wk13 | ADAM12 | 8038 | 190 | 0.8 | 0.33 | 0.02 | 4.2227672400314E-7 | 0.01 |
| 73 | 0 | CnT | Connecting tubule | wk13 | PPP1R1B | 84152 | 9287 | 0.78 | 0.33 | 0.004 | 4.4916439504009E-32 | 1.5134145126481E-27 |
| 73 | 0 | CnT | Connecting tubule | wk13 | GABRA2 | 2555 | 4076 | 0.78 | 0.5 | 0.03 | 1.0626082289237E-9 | 3.5803521665355E-5 |
| 73 | 0 | CnT | Connecting tubule | wk13 | ARHGEF35 | 445328 | 33846 | 0.77 | 0.5 | 0.04 | 1.4508802427807E-7 | 0.0048885958900254 |
| 73 | 0 | CnT | Connecting tubule | wk13 | MOXD1 | 26002 | 21063 | 0.77 | 0.5 | 0.02 | 2.1191457173967E-13 | 7.1402495801963E-9 |
| 73 | 0 | CnT | Connecting tubule | wk13 | TACSTD2 | 4070 | 11530 | 0.77 | 0.33 | 0.02 | 2.7352812108861E-7 | 0.0092162565119596 |
| 73 | 0 | CnT | Connecting tubule | wk13 | RBPMS2 | 348093 | 19098 | 0.77 | 0.5 | 0.05 | 1.0041589051172E-6 | 0.03 |
| 73 | 0 | CnT | Connecting tubule | wk13 | IRF8 | 3394 | 5358 | 0.76 | 0.33 | 0.006 | 1.1268227528694E-21 | 3.7967165835182E-17 |
| 73 | 0 | CnT | Connecting tubule | wk13 | CERNA1 | 100129973 | 52664 | 0.75 | 0.33 | 0.001 | 8.9840844732002E-72 | 3.0270974224001E-67 |
| 73 | 0 | CnT | Connecting tubule | wk13 | HS3ST5 | 222537 | 19419 | 0.75 | 0.33 | 0.001 | 1.1957701488302E-71 | 4.0290279394684E-67 |
| 73 | 0 | CnT | Connecting tubule | wk13 | ENSG00000220256 | NULL | 0.74 | 0.33 | 0.004 | 1.4720713440787E-36 | 4.9599971867389E-32 | |
| 73 | 0 | CnT | Connecting tubule | wk13 | ZNF782 | 158431 | 33110 | 0.74 | 0.33 | 0.004 | 4.1319760861751E-32 | 1.3922280224758E-27 |
| 73 | 0 | CnT | Connecting tubule | wk13 | AMER1 | 139285 | 26837 | 0.74 | 0.33 | 0.004 | 3.7008300909014E-30 | 1.2469576908283E-25 |
| 73 | 0 | CnT | Connecting tubule | wk13 | SMKR1 | 100287482 | 43561 | 0.74 | 0.33 | 0.005 | 7.1040669851005E-26 | 2.3936443299598E-21 |
| 73 | 0 | CnT | Connecting tubule | wk13 | OBSCN-AS1 | 574407 | 32047 | 0.73 | 0.33 | 0.004 | 5.473914453065E-30 | 1.8443807358157E-25 |
| 73 | 0 | CnT | Connecting tubule | wk13 | TBC1D9 | 23158 | 21710 | 0.73 | 0.5 | 0.04 | 4.5312715461673E-8 | 0.0015267666347656 |
| 73 | 0 | CnT | Connecting tubule | wk13 | LINC01588 | 283551 | 27503 | 0.73 | 0.33 | 0.007 | 4.0574827355505E-20 | 1.3671282329164E-15 |
| 73 | 0 | CnT | Connecting tubule | wk13 | PPIP5K1 | 9677 | 29023 | 0.73 | 0.33 | 0.009 | 1.5116560974364E-16 | 5.0933740547023E-12 |
| 73 | 0 | CnT | Connecting tubule | wk13 | LRRC4B | 94030 | 25042 | 0.73 | 0.33 | 0.009 | 4.6265288878159E-16 | 1.5588626434607E-11 |
| 73 | 0 | CnT | Connecting tubule | wk13 | PAN3-AS1 | 100288730 | 39932 | 0.73 | 0.33 | 0.006 | 1.7075032326859E-21 | 5.7532613922119E-17 |
| 73 | 0 | CnT | Connecting tubule | wk13 | MTBP | 27085 | 7417 | 0.72 | 0.33 | 0.01 | 1.8488388962083E-13 | 6.2294777768844E-9 |
| 73 | 0 | CnT | Connecting tubule | wk13 | TRPV1 | 7442 | 12716 | 0.72 | 0.33 | 0.01 | 9.4466642031811E-13 | 3.1829590366198E-8 |
| 73 | 0 | CnT | Connecting tubule | wk13 | OTUB2 | 78990 | 20351 | 0.72 | 0.33 | 0.01 | 9.5941212936443E-12 | 3.2326432286805E-7 |
| 73 | 0 | CnT | Connecting tubule | wk13 | CXCL16 | 58191 | 16642 | 0.71 | 0.33 | 0.01 | 3.2201027541133E-12 | 1.0849814219709E-7 |
| 73 | 0 | CnT | Connecting tubule | wk13 | OGDHL | 55753 | 25590 | 0.71 | 0.33 | 0.01 | 3.1890611215007E-10 | 1.0745222542784E-5 |
| 73 | 0 | CnT | Connecting tubule | wk13 | BSPRY | 54836 | 18232 | 0.71 | 0.33 | 0.01 | 1.600765129642E-10 | 5.3936180278157E-6 |
| 73 | 0 | CnT | Connecting tubule | wk13 | CNNM2 | 54805 | 103 | 0.71 | 0.33 | 0.01 | 8.4504327986406E-10 | 2.8472888271739E-5 |
| 73 | 0 | CnT | Connecting tubule | wk13 | RET | 5979 | 9967 | 0.71 | 0.33 | 0.002 | 7.196841766468E-63 | 2.4249038647937E-58 |
| 73 | 0 | CnT | Connecting tubule | wk13 | GEM | 2669 | 4234 | 0.71 | 0.33 | 0.01 | 5.259640949259E-9 | 0.00017721834214434 |