Marker Genes
Dataset: Single-cell transcriptomics reveals gene expression dynamics of human fetal kidney development
- tissue: Kidney
- ontology: Kidney
- genotype: -
- stage: Fetal
- treatment condition: WT
- cell/nucleus: Cells
- pmid: 30789893
- subset name: wk13
- total genes: Not reported
- clustering: scran
- pseudotime: Monocle 2
- link: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE114530
Rows:100
dataset id | cluster id | cluster name | cell type name | sample id | gene symbol | entrez geneid | species specific geneid |
avg log fc (?)
|
pct 1 | pct 2 | p value | padj |
---|---|---|---|---|---|---|---|---|---|---|---|---|
73 | 0 | CnT | Connecting tubule | wk13 | GATA3 | 2625 | 4172 | 2.12 | 1 | 0.01 | 8.19618525759588e-66 | 2.76162266069436e-61 |
73 | 0 | CnT | Connecting tubule | wk13 | TBX3 | 6926 | 11602 | 1.73 | 0.5 | 0.01 | 7.28505246838944e-25 | 2.45462557869914e-20 |
73 | 0 | CnT | Connecting tubule | wk13 | ALDH1A1 | 216 | 402 | 1.61 | 1 | 0.17 | 1.61069284692386e-09 | 5.42706847842524e-05 |
73 | 0 | CnT | Connecting tubule | wk13 | WFDC2 | 10406 | 15939 | 1.61 | 0.83 | 0.16 | 5.70346437142186e-07 | 0.01 |
73 | 0 | CnT | Connecting tubule | wk13 | AURKC | 6795 | 11391 | 1.43 | 1 | 0.01 | 4.37466629833878e-85 | 1.47400006256227e-80 |
73 | 0 | CnT | Connecting tubule | wk13 | TMEM52B | 120939 | 26438 | 1.4 | 0.33 | 0.01 | 1.9543496558835e-10 | 6.58498573053387e-06 |
73 | 0 | CnT | Connecting tubule | wk13 | ADH1C | 126 | 251 | 1.34 | 0.5 | 0.008 | 6.16902932245419e-37 | 2.07859273990771e-32 |
73 | 0 | CnT | Connecting tubule | wk13 | ELF3 | 1999 | 3318 | 1.31 | 1 | 0.21 | 3.36177555599973e-07 | 0.01 |
73 | 0 | CnT | Connecting tubule | wk13 | RCBTB1 | 55213 | 18243 | 1.23 | 0.83 | 0.04 | 3.52630368675958e-19 | 1.18815276421677e-14 |
73 | 0 | CnT | Connecting tubule | wk13 | TMEM45B | 120224 | 25194 | 1.2 | 0.33 | 0.004 | 5.09022127332995e-32 | 1.71509915583579e-27 |
73 | 0 | CnT | Connecting tubule | wk13 | RHOD | 29984 | 670 | 1.2 | 0.66 | 0.02 | 1.85146950285977e-23 | 6.23834134293571e-19 |
73 | 0 | CnT | Connecting tubule | wk13 | AP3B1 | 8546 | 566 | 1.18 | 1 | 0.1 | 1.04395609619233e-12 | 3.51750567051043e-08 |
73 | 0 | CnT | Connecting tubule | wk13 | RILPL2 | 196383 | 28787 | 1.17 | 0.66 | 0.07 | 3.91379067237946e-08 | 0.00131871262915154 |
73 | 0 | CnT | Connecting tubule | wk13 | TFAP2A | 7020 | 11742 | 1.15 | 0.5 | 0.03 | 3.44635517538994e-11 | 1.16121491279589e-06 |
73 | 0 | CnT | Connecting tubule | wk13 | SLC12A2 | 6558 | 10911 | 1.15 | 0.83 | 0.1 | 7.08208115604122e-10 | 2.38623642471653e-05 |
73 | 0 | CnT | Connecting tubule | wk13 | ALKAL2 | 285016 | 27683 | 1.14 | 0.33 | 0.01 | 1.76606293725938e-10 | 5.95057246080177e-06 |
73 | 0 | CnT | Connecting tubule | wk13 | SART3 | 9733 | 16860 | 1.14 | 0.66 | 0.09 | 8.72029476151485e-07 | 0.02 |
73 | 0 | CnT | Connecting tubule | wk13 | PKHD1 | 5314 | 9016 | 1.14 | 0.66 | 0.04 | 2.42434499399697e-14 | 8.1685880227734e-10 |
73 | 0 | CnT | Connecting tubule | wk13 | PIK3C2G | 5288 | 8973 | 1.13 | 0.5 | 0.001 | 1.40852448085446e-159 | 4.74588238579103e-155 |
73 | 0 | CnT | Connecting tubule | wk13 | CYB5R2 | 51700 | 24376 | 1.12 | 0.66 | 0.02 | 5.71148949547718e-20 | 1.92442927060608e-15 |
73 | 0 | CnT | Connecting tubule | wk13 | KLF5 | 688 | 6349 | 1.12 | 1 | 0.11 | 1.14201470369526e-11 | 3.84790434263081e-07 |
73 | 0 | CnT | Connecting tubule | wk13 | C15orf65 | 145788 | 44654 | 1.12 | 0.66 | 0.04 | 1.32697811036982e-12 | 4.47112004508009e-08 |
73 | 0 | CnT | Connecting tubule | wk13 | GATA2 | 2624 | 4171 | 1.11 | 0.33 | 0.01 | 1.31139580874677e-11 | 4.41861703799138e-07 |
73 | 0 | CnT | Connecting tubule | wk13 | PRELID3A | 10650 | 24639 | 1.1 | 0.66 | 0.02 | 1.99884327193042e-24 | 6.73490252044237e-20 |
73 | 0 | CnT | Connecting tubule | wk13 | GOLGA1 | 2800 | 4424 | 1.1 | 0.66 | 0.02 | 1.30132888681445e-23 | 4.3846975512326e-19 |
73 | 0 | CnT | Connecting tubule | wk13 | LOC441179 | 441179 | NULL | 1.07 | 0.5 | 0.005 | 7.42181961199724e-57 | 2.50070790006635e-52 |
73 | 0 | CnT | Connecting tubule | wk13 | RHBDF2 | 79651 | 20788 | 1.05 | 0.66 | 0.009 | 4.28116915978024e-57 | 1.44249713669635e-52 |
73 | 0 | CnT | Connecting tubule | wk13 | RPAP3 | 79657 | 26151 | 1.04 | 0.66 | 0.09 | 2.85458999875103e-07 | 0.00961825554179171 |
73 | 0 | CnT | Connecting tubule | wk13 | KCTD12 | 115207 | 14678 | 1.04 | 0.66 | 0.07 | 1.75578486480944e-08 | 0.000591594152348893 |
73 | 0 | CnT | Connecting tubule | wk13 | CMTM8 | 152189 | 19179 | 1.04 | 0.66 | 0.09 | 3.13674196001985e-07 | 0.01 |
73 | 0 | CnT | Connecting tubule | wk13 | CRABP1 | 1381 | 2338 | 1.03 | 0.33 | 0.01 | 7.49545573688208e-09 | 0.000252551885598505 |
73 | 0 | CnT | Connecting tubule | wk13 | ANXA3 | 306 | 541 | 1.02 | 0.5 | 0.05 | 1.09766291192536e-06 | 0.03 |
73 | 0 | CnT | Connecting tubule | wk13 | SLC25A42 | 284439 | 28380 | 1.02 | 0.66 | 0.05 | 1.23089477196107e-11 | 4.14737684464563e-07 |
73 | 0 | CnT | Connecting tubule | wk13 | STXBP6 | 29091 | 19666 | 1.01 | 0.5 | 0.01 | 1.67552240901616e-27 | 5.64550520493904e-23 |
73 | 0 | CnT | Connecting tubule | wk13 | NAA30 | 122830 | 19844 | 1 | 0.66 | 0.09 | 7.4228506843162e-07 | 0.02 |
73 | 0 | CnT | Connecting tubule | wk13 | ZNF136 | 7695 | 12920 | 1 | 0.66 | 0.06 | 4.52905769440435e-10 | 1.5260206995526e-05 |
73 | 0 | CnT | Connecting tubule | wk13 | WWOX | 51741 | 12799 | 0.99 | 0.66 | 0.06 | 1.36706844811316e-09 | 4.60620042907249e-05 |
73 | 0 | CnT | Connecting tubule | wk13 | TUBA4A | 7277 | 12407 | 0.99 | 0.5 | 0.04 | 6.84818343393318e-08 | 0.00230742692622944 |
73 | 0 | CnT | Connecting tubule | wk13 | ARHGAP4 | 393 | 674 | 0.98 | 0.5 | 0.01 | 4.22293015035e-17 | 1.42287408485893e-12 |
73 | 0 | CnT | Connecting tubule | wk13 | BCAT1 | 586 | 976 | 0.97 | 0.5 | 0.02 | 2.29268170955488e-14 | 7.7249617521742e-10 |
73 | 0 | CnT | Connecting tubule | wk13 | ELOVL7 | 79993 | 26292 | 0.95 | 0.5 | 0.02 | 2.21695770161531e-13 | 7.46981727982261e-09 |
73 | 0 | CnT | Connecting tubule | wk13 | SLC35G1 | 159371 | 26607 | 0.95 | 0.66 | 0.03 | 4.59849777591561e-15 | 1.54941784061701e-10 |
73 | 0 | CnT | Connecting tubule | wk13 | EDN3 | 1908 | 3178 | 0.95 | 0.33 | 0.003 | 1.84633467487129e-42 | 6.22104005351131e-38 |
73 | 0 | CnT | Connecting tubule | wk13 | FAM118A | 55007 | 1313 | 0.94 | 0.83 | 0.13 | 5.21851934557341e-07 | 0.01 |
73 | 0 | CnT | Connecting tubule | wk13 | NEO1 | 4756 | 7754 | 0.93 | 0.66 | 0.08 | 4.57478407749005e-07 | 0.01 |
73 | 0 | CnT | Connecting tubule | wk13 | ABCF3 | 55324 | 72 | 0.93 | 0.66 | 0.05 | 1.01094103328278e-11 | 3.40626471754301e-07 |
73 | 0 | CnT | Connecting tubule | wk13 | AGR2 | 10551 | 328 | 0.93 | 0.5 | 0.003 | 2.06651032823345e-93 | 6.9628998999498e-89 |
73 | 0 | CnT | Connecting tubule | wk13 | SLC7A2 | 6542 | 11060 | 0.92 | 0.5 | 0.03 | 2.26166653474385e-09 | 7.62045922216594e-05 |
73 | 0 | CnT | Connecting tubule | wk13 | RFWD3 | 55159 | 25539 | 0.92 | 0.5 | 0.03 | 1.98620518098906e-09 | 6.69231973682454e-05 |
73 | 0 | CnT | Connecting tubule | wk13 | IFT122 | 55764 | 13556 | 0.92 | 0.66 | 0.05 | 1.70682339899815e-10 | 5.75097076058437e-06 |
73 | 0 | CnT | Connecting tubule | wk13 | MCM3AP | 8888 | 6946 | 0.92 | 0.66 | 0.05 | 1.3970852395891e-10 | 4.70733900627152e-06 |
73 | 0 | CnT | Connecting tubule | wk13 | PKIA | 5569 | 9017 | 0.9 | 0.5 | 0.04 | 2.43264987431587e-07 | 0.0081965704865199 |
73 | 0 | CnT | Connecting tubule | wk13 | ACSS3 | 79611 | 24723 | 0.88 | 0.5 | 0.01 | 2.81523558640234e-17 | 9.48565478482404e-13 |
73 | 0 | CnT | Connecting tubule | wk13 | PLPP2 | 8612 | 9230 | 0.87 | 0.33 | 0.004 | 4.30808460960957e-32 | 1.45156602836185e-27 |
73 | 0 | CnT | Connecting tubule | wk13 | CAPG | 822 | 1474 | 0.87 | 0.5 | 0.04 | 2.95313934188316e-07 | 0.00995030769854113 |
73 | 0 | CnT | Connecting tubule | wk13 | ZNF792 | 126375 | 24751 | 0.86 | 0.33 | 0.006 | 1.32424609597283e-23 | 4.46191479577085e-19 |
73 | 0 | CnT | Connecting tubule | wk13 | CAPN12 | 147968 | 13249 | 0.86 | 0.5 | 0.02 | 6.19806116799299e-12 | 2.08837472994356e-07 |
73 | 0 | CnT | Connecting tubule | wk13 | ENSG00000237753 | NULL | 0.86 | 0.33 | 0.009 | 3.86900942878013e-17 | 1.30362403693318e-12 | |
73 | 0 | CnT | Connecting tubule | wk13 | ENSG00000225177 | NULL | 0.85 | 0.33 | 0.01 | 2.74220912772941e-15 | 9.23959943497148e-11 | |
73 | 0 | CnT | Connecting tubule | wk13 | ME3 | 10873 | 6985 | 0.85 | 0.33 | 0.01 | 6.76706916680233e-13 | 2.28009628506238e-08 |
73 | 0 | CnT | Connecting tubule | wk13 | CLDN14 | 23562 | 2035 | 0.84 | 0.33 | 0.01 | 2.14989558900632e-11 | 7.24385819759789e-07 |
73 | 0 | CnT | Connecting tubule | wk13 | RASSF6 | 166824 | 20796 | 0.84 | 0.33 | 0.01 | 2.43688960502139e-11 | 8.21085583515906e-07 |
73 | 0 | CnT | Connecting tubule | wk13 | KNTC1 | 9735 | 17255 | 0.83 | 0.33 | 0.01 | 6.14760134028277e-09 | 0.000207137279559487 |
73 | 0 | CnT | Connecting tubule | wk13 | MVB12B | 89853 | 23368 | 0.83 | 0.33 | 0.01 | 1.46652173705415e-09 | 4.94129834083025e-05 |
73 | 0 | CnT | Connecting tubule | wk13 | LCN12 | 286256 | 28733 | 0.83 | 0.33 | 0.01 | 7.15237574656093e-10 | 2.40992148404624e-05 |
73 | 0 | CnT | Connecting tubule | wk13 | FAM171B | 165215 | 29412 | 0.83 | 0.33 | 0.01 | 9.00433794960729e-09 | 0.000303392162874068 |
73 | 0 | CnT | Connecting tubule | wk13 | CCNQ | 92002 | 28434 | 0.83 | 0.66 | 0.09 | 1.2689268397743e-06 | 0.04 |
73 | 0 | CnT | Connecting tubule | wk13 | NCKIPSD | 51517 | 15486 | 0.82 | 0.33 | 0.02 | 4.34274351291065e-07 | 0.01 |
73 | 0 | CnT | Connecting tubule | wk13 | FBXL7 | 23194 | 13604 | 0.81 | 0.33 | 0.02 | 1.35376514662006e-07 | 0.00456137628502164 |
73 | 0 | CnT | Connecting tubule | wk13 | TOR1B | 27348 | 11995 | 0.81 | 0.33 | 0.02 | 1.28164673174331e-06 | 0.04 |
73 | 0 | CnT | Connecting tubule | wk13 | RTL5 | 340526 | 29430 | 0.8 | 0.33 | 0.02 | 1.06770619127741e-06 | 0.03 |
73 | 0 | CnT | Connecting tubule | wk13 | ADAM12 | 8038 | 190 | 0.8 | 0.33 | 0.02 | 4.22276724003143e-07 | 0.01 |
73 | 0 | CnT | Connecting tubule | wk13 | PPP1R1B | 84152 | 9287 | 0.78 | 0.33 | 0.004 | 4.49164395040089e-32 | 1.51341451264808e-27 |
73 | 0 | CnT | Connecting tubule | wk13 | GABRA2 | 2555 | 4076 | 0.78 | 0.5 | 0.03 | 1.06260822892369e-09 | 3.5803521665355e-05 |
73 | 0 | CnT | Connecting tubule | wk13 | ARHGEF35 | 445328 | 33846 | 0.77 | 0.5 | 0.04 | 1.45088024278073e-07 | 0.0048885958900254 |
73 | 0 | CnT | Connecting tubule | wk13 | MOXD1 | 26002 | 21063 | 0.77 | 0.5 | 0.02 | 2.11914571739667e-13 | 7.14024958019635e-09 |
73 | 0 | CnT | Connecting tubule | wk13 | TACSTD2 | 4070 | 11530 | 0.77 | 0.33 | 0.02 | 2.7352812108861e-07 | 0.00921625651195961 |
73 | 0 | CnT | Connecting tubule | wk13 | RBPMS2 | 348093 | 19098 | 0.77 | 0.5 | 0.05 | 1.0041589051172e-06 | 0.03 |
73 | 0 | CnT | Connecting tubule | wk13 | IRF8 | 3394 | 5358 | 0.76 | 0.33 | 0.006 | 1.1268227528694e-21 | 3.79671658351816e-17 |
73 | 0 | CnT | Connecting tubule | wk13 | CERNA1 | 100129973 | 52664 | 0.75 | 0.33 | 0.001 | 8.98408447320022e-72 | 3.02709742240008e-67 |
73 | 0 | CnT | Connecting tubule | wk13 | HS3ST5 | 222537 | 19419 | 0.75 | 0.33 | 0.001 | 1.19577014883017e-71 | 4.02902793946837e-67 |
73 | 0 | CnT | Connecting tubule | wk13 | ENSG00000220256 | NULL | 0.74 | 0.33 | 0.004 | 1.47207134407874e-36 | 4.95999718673889e-32 | |
73 | 0 | CnT | Connecting tubule | wk13 | ZNF782 | 158431 | 33110 | 0.74 | 0.33 | 0.004 | 4.13197608617508e-32 | 1.39222802247583e-27 |
73 | 0 | CnT | Connecting tubule | wk13 | AMER1 | 139285 | 26837 | 0.74 | 0.33 | 0.004 | 3.70083009090137e-30 | 1.24695769082831e-25 |
73 | 0 | CnT | Connecting tubule | wk13 | SMKR1 | 100287482 | 43561 | 0.74 | 0.33 | 0.005 | 7.10406698510049e-26 | 2.39364432995976e-21 |
73 | 0 | CnT | Connecting tubule | wk13 | OBSCN-AS1 | 574407 | 32047 | 0.73 | 0.33 | 0.004 | 5.47391445306498e-30 | 1.84438073581571e-25 |
73 | 0 | CnT | Connecting tubule | wk13 | TBC1D9 | 23158 | 21710 | 0.73 | 0.5 | 0.04 | 4.53127154616734e-08 | 0.00152676663476562 |
73 | 0 | CnT | Connecting tubule | wk13 | LINC01588 | 283551 | 27503 | 0.73 | 0.33 | 0.007 | 4.05748273555048e-20 | 1.36712823291638e-15 |
73 | 0 | CnT | Connecting tubule | wk13 | PPIP5K1 | 9677 | 29023 | 0.73 | 0.33 | 0.009 | 1.51165609743642e-16 | 5.09337405470227e-12 |
73 | 0 | CnT | Connecting tubule | wk13 | LRRC4B | 94030 | 25042 | 0.73 | 0.33 | 0.009 | 4.62652888781585e-16 | 1.55886264346067e-11 |
73 | 0 | CnT | Connecting tubule | wk13 | PAN3-AS1 | 100288730 | 39932 | 0.73 | 0.33 | 0.006 | 1.7075032326859e-21 | 5.75326139221188e-17 |
73 | 0 | CnT | Connecting tubule | wk13 | MTBP | 27085 | 7417 | 0.72 | 0.33 | 0.01 | 1.84883889620834e-13 | 6.22947777688439e-09 |
73 | 0 | CnT | Connecting tubule | wk13 | TRPV1 | 7442 | 12716 | 0.72 | 0.33 | 0.01 | 9.44666420318105e-13 | 3.18295903661982e-08 |
73 | 0 | CnT | Connecting tubule | wk13 | OTUB2 | 78990 | 20351 | 0.72 | 0.33 | 0.01 | 9.59412129364429e-12 | 3.23264322868051e-07 |
73 | 0 | CnT | Connecting tubule | wk13 | CXCL16 | 58191 | 16642 | 0.71 | 0.33 | 0.01 | 3.22010275411335e-12 | 1.08498142197095e-07 |
73 | 0 | CnT | Connecting tubule | wk13 | OGDHL | 55753 | 25590 | 0.71 | 0.33 | 0.01 | 3.18906112150068e-10 | 1.07452225427844e-05 |
73 | 0 | CnT | Connecting tubule | wk13 | BSPRY | 54836 | 18232 | 0.71 | 0.33 | 0.01 | 1.60076512964198e-10 | 5.39361802781567e-06 |
73 | 0 | CnT | Connecting tubule | wk13 | CNNM2 | 54805 | 103 | 0.71 | 0.33 | 0.01 | 8.45043279864056e-10 | 2.84728882717395e-05 |
73 | 0 | CnT | Connecting tubule | wk13 | RET | 5979 | 9967 | 0.71 | 0.33 | 0.002 | 7.196841766468e-63 | 2.42490386479373e-58 |
73 | 0 | CnT | Connecting tubule | wk13 | GEM | 2669 | 4234 | 0.71 | 0.33 | 0.01 | 5.25964094925905e-09 | 0.000177218342144335 |