Marker Genes
Dataset: Single-cell transcriptomics reveals gene expression dynamics of human fetal kidney development
- tissue: Kidney
- ontology: Kidney
- genotype: -
- stage: Fetal
- treatment condition: WT
- cell/nucleus: Cells
- pmid: 30789893
- subset name: wk11
- total genes: Not reported
- clustering: scran
- pseudotime: Monocle 2
- link: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE114530
Rows:100
| dataset id | cluster id | cluster name | cell type name | sample id | gene symbol | entrez geneid | species specific geneid |
avg log fc (?)
|
pct 1 | pct 2 | p value | padj |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 72 | 9 | NPCa | Nephron progenitor cells a | wk11 | RSPO3 | 84870 | 20866 | 1.56 | 0.78 | 0.15 | 6.7244351074117E-185 | 2.2657311650913E-180 |
| 72 | 9 | NPCa | Nephron progenitor cells a | wk11 | PHLDA1 | 22822 | 8933 | 1.44 | 0.82 | 0.29 | 1.518771461795E-130 | 5.1173485633719E-126 |
| 72 | 9 | NPCa | Nephron progenitor cells a | wk11 | LRATD1 | 151354 | 20743 | 1.32 | 0.71 | 0.19 | 4.4214277252335E-129 | 1.4897558577402E-124 |
| 72 | 9 | NPCa | Nephron progenitor cells a | wk11 | NKAIN3 | 286183 | 26829 | 1.29 | 0.73 | 0.16 | 1.0516434043968E-154 | 3.5434072867745E-150 |
| 72 | 9 | NPCa | Nephron progenitor cells a | wk11 | SHISA3 | 152573 | 25159 | 1.24 | 0.71 | 0.2 | 2.3332577782789E-114 | 7.8616787581328E-110 |
| 72 | 9 | NPCa | Nephron progenitor cells a | wk11 | MEOX1 | 4222 | 7013 | 1.07 | 0.56 | 0.11 | 1.7472579784332E-120 | 5.8872110325329E-116 |
| 72 | 9 | NPCa | Nephron progenitor cells a | wk11 | PRXL2A | 84293 | 28651 | 1.07 | 0.92 | 0.57 | 1.2126952467883E-99 | 4.0860553645284E-95 |
| 72 | 9 | NPCa | Nephron progenitor cells a | wk11 | NNAT | 4826 | 7860 | 1.06 | 0.8 | 0.3 | 1.8797357763797E-91 | 6.3335817249339E-87 |
| 72 | 9 | NPCa | Nephron progenitor cells a | wk11 | TMEM100 | 55273 | 25607 | 1 | 0.65 | 0.25 | 1.1277134722902E-64 | 3.7997177735346E-60 |
| 72 | 9 | NPCa | Nephron progenitor cells a | wk11 | BMPER | 168667 | 24154 | 0.99 | 0.58 | 0.13 | 3.3149438086842E-109 | 1.1169371668981E-104 |
| 72 | 9 | NPCa | Nephron progenitor cells a | wk11 | WASF3 | 10810 | 12734 | 0.94 | 0.65 | 0.27 | 8.1115159352119E-70 | 2.7330941792103E-65 |
| 72 | 9 | NPCa | Nephron progenitor cells a | wk11 | EYA1 | 2138 | 3519 | 0.94 | 0.55 | 0.17 | 1.2428113156191E-73 | 4.1875284468471E-69 |
| 72 | 9 | NPCa | Nephron progenitor cells a | wk11 | TPM1 | 7168 | 12010 | 0.94 | 0.86 | 0.5 | 3.8551901674874E-73 | 1.2989677750332E-68 |
| 72 | 9 | NPCa | Nephron progenitor cells a | wk11 | SCG5 | 6447 | 10816 | 0.91 | 0.61 | 0.21 | 7.6304941368689E-76 | 2.5710186944766E-71 |
| 72 | 9 | NPCa | Nephron progenitor cells a | wk11 | SLC15A1 | 6564 | 10920 | 0.91 | 0.47 | 0.11 | 7.0335797099092E-77 | 2.3698943474568E-72 |
| 72 | 9 | NPCa | Nephron progenitor cells a | wk11 | TUBA1A | 7846 | 20766 | 0.88 | 0.99 | 0.76 | 1.111887242356E-83 | 3.7463928743944E-79 |
| 72 | 9 | NPCa | Nephron progenitor cells a | wk11 | NR2F2 | 7026 | 7976 | 0.87 | 0.92 | 0.69 | 9.2667875414857E-73 | 3.1223513942282E-68 |
| 72 | 9 | NPCa | Nephron progenitor cells a | wk11 | NREP | 9315 | 16834 | 0.87 | 0.95 | 0.76 | 3.4088910108894E-83 | 1.1485917372091E-78 |
| 72 | 9 | NPCa | Nephron progenitor cells a | wk11 | SOCS3 | 9021 | 19391 | 0.85 | 0.62 | 0.35 | 1.9549140254933E-37 | 6.5868873174972E-33 |
| 72 | 9 | NPCa | Nephron progenitor cells a | wk11 | SIX1 | 6495 | 10887 | 0.85 | 0.5 | 0.15 | 6.7115004685338E-64 | 2.2613729678678E-59 |
| 72 | 9 | NPCa | Nephron progenitor cells a | wk11 | NBL1 | 4681 | 7650 | 0.85 | 0.49 | 0.17 | 2.0457903846866E-56 | 6.8930861221629E-52 |
| 72 | 9 | NPCa | Nephron progenitor cells a | wk11 | SOX11 | 6664 | 11191 | 0.83 | 0.62 | 0.38 | 4.2178988089118E-32 | 1.4211788246747E-27 |
| 72 | 9 | NPCa | Nephron progenitor cells a | wk11 | HOXB9 | 3219 | 5120 | 0.83 | 0.54 | 0.19 | 2.4878687651408E-57 | 8.3826250172653E-53 |
| 72 | 9 | NPCa | Nephron progenitor cells a | wk11 | ENSG00000273015 | NULL | 0.82 | 0.56 | 0.3 | 2.4409391574013E-40 | 8.224500396948E-36 | |
| 72 | 9 | NPCa | Nephron progenitor cells a | wk11 | CHRNA1 | 1134 | 1955 | 0.82 | 0.36 | 0.04 | 3.2530386276798E-112 | 1.0960788352104E-107 |
| 72 | 9 | NPCa | Nephron progenitor cells a | wk11 | CRABP2 | 1382 | 2339 | 0.82 | 0.75 | 0.31 | 1.1642212999625E-63 | 3.9227272480938E-59 |
| 72 | 9 | NPCa | Nephron progenitor cells a | wk11 | HOXB-AS3 | 404266 | 40283 | 0.81 | 0.45 | 0.15 | 1.3619986742527E-48 | 4.589118333027E-44 |
| 72 | 9 | NPCa | Nephron progenitor cells a | wk11 | CITED1 | 4435 | 1986 | 0.77 | 0.41 | 0.12 | 6.45605344916E-51 | 2.17530264916E-46 |
| 72 | 9 | NPCa | Nephron progenitor cells a | wk11 | LAMA4 | 3910 | 6484 | 0.76 | 0.43 | 0.15 | 1.3043874025258E-48 | 4.3950029140706E-44 |
| 72 | 9 | NPCa | Nephron progenitor cells a | wk11 | NCAM1 | 4684 | 7656 | 0.74 | 0.45 | 0.17 | 5.308167351775E-41 | 1.7885339075071E-36 |
| 72 | 9 | NPCa | Nephron progenitor cells a | wk11 | NR2F1 | 7025 | 7975 | 0.74 | 0.73 | 0.49 | 3.9752761391284E-42 | 1.3394295423179E-37 |
| 72 | 9 | NPCa | Nephron progenitor cells a | wk11 | MEIS2 | 4212 | 7001 | 0.73 | 0.66 | 0.36 | 7.4605337854968E-43 | 2.5137522536853E-38 |
| 72 | 9 | NPCa | Nephron progenitor cells a | wk11 | IGF2 | 3481 | 5466 | 0.73 | 0.92 | 0.53 | 1.03615618403E-61 | 3.4912246464707E-57 |
| 72 | 9 | NPCa | Nephron progenitor cells a | wk11 | HOXC6 | 3223 | 5128 | 0.72 | 0.44 | 0.18 | 1.7326157622054E-37 | 5.837875549175E-33 |
| 72 | 9 | NPCa | Nephron progenitor cells a | wk11 | NPTX2 | 4885 | 7953 | 0.72 | 0.27 | 0.03 | 4.5345380586542E-88 | 1.527867253483E-83 |
| 72 | 9 | NPCa | Nephron progenitor cells a | wk11 | SOX4 | 6659 | 11200 | 0.72 | 0.93 | 0.71 | 9.8231952486651E-52 | 3.3098274070852E-47 |
| 72 | 9 | NPCa | Nephron progenitor cells a | wk11 | SIX2 | 10736 | 10888 | 0.72 | 0.42 | 0.13 | 3.7578217700677E-49 | 1.2661604672066E-44 |
| 72 | 9 | NPCa | Nephron progenitor cells a | wk11 | PDGFC | 56034 | 8801 | 0.71 | 0.5 | 0.25 | 1.4514415321539E-34 | 4.8904870984392E-30 |
| 72 | 9 | NPCa | Nephron progenitor cells a | wk11 | ST8SIA4 | 7903 | 10871 | 0.71 | 0.32 | 0.05 | 8.3554980699098E-75 | 2.8153015196754E-70 |
| 72 | 9 | NPCa | Nephron progenitor cells a | wk11 | HOXA10 | 3206 | 5100 | 0.7 | 0.79 | 0.61 | 5.5881907631037E-41 | 1.8828849957202E-36 |
| 72 | 9 | NPCa | Nephron progenitor cells a | wk11 | COL2A1 | 1280 | 2200 | 0.69 | 0.5 | 0.21 | 1.3146656541409E-41 | 4.4296344550624E-37 |
| 72 | 9 | NPCa | Nephron progenitor cells a | wk11 | TRIL | 9865 | 22200 | 0.69 | 0.42 | 0.16 | 3.9182014282744E-37 | 1.3201987892428E-32 |
| 72 | 9 | NPCa | Nephron progenitor cells a | wk11 | RSPO1 | 284654 | 21679 | 0.68 | 0.27 | 0.06 | 4.0499320279448E-45 | 1.3645840974957E-40 |
| 72 | 9 | NPCa | Nephron progenitor cells a | wk11 | PCBP4 | 57060 | 8652 | 0.68 | 0.49 | 0.26 | 2.03847047589E-30 | 6.8684224214637E-26 |
| 72 | 9 | NPCa | Nephron progenitor cells a | wk11 | DDIT4 | 54541 | 24944 | 0.68 | 0.67 | 0.44 | 2.3860134153894E-33 | 8.0394336018129E-29 |
| 72 | 9 | NPCa | Nephron progenitor cells a | wk11 | PCSK1N | 27344 | 17301 | 0.67 | 0.51 | 0.27 | 2.0216019704083E-30 | 6.8115856790936E-26 |
| 72 | 9 | NPCa | Nephron progenitor cells a | wk11 | ETV1 | 2115 | 3490 | 0.67 | 0.36 | 0.11 | 1.0936111984893E-44 | 3.6848135721899E-40 |
| 72 | 9 | NPCa | Nephron progenitor cells a | wk11 | OSR1 | 130497 | 8111 | 0.66 | 0.29 | 0.06 | 3.6961990080557E-48 | 1.2453972937743E-43 |
| 72 | 9 | NPCa | Nephron progenitor cells a | wk11 | NUDT4 | 11163 | 8051 | 0.66 | 0.53 | 0.33 | 4.1308810936927E-26 | 1.3918590757088E-21 |
| 72 | 9 | NPCa | Nephron progenitor cells a | wk11 | ETV5 | 2119 | 3494 | 0.66 | 0.35 | 0.1 | 2.7343763896107E-47 | 9.2132078071541E-43 |
| 72 | 9 | NPCa | Nephron progenitor cells a | wk11 | PDLIM1 | 9124 | 2067 | 0.65 | 0.49 | 0.26 | 1.4758081612128E-29 | 4.9725880183902E-25 |
| 72 | 9 | NPCa | Nephron progenitor cells a | wk11 | TCF7L2 | 6934 | 11641 | 0.65 | 0.53 | 0.3 | 1.9300069179567E-30 | 6.5029653093634E-26 |
| 72 | 9 | NPCa | Nephron progenitor cells a | wk11 | CADM1 | 23705 | 5951 | 0.63 | 0.74 | 0.46 | 7.8594929295424E-34 | 2.64817754768E-29 |
| 72 | 9 | NPCa | Nephron progenitor cells a | wk11 | HLA-DQB1 | 3119 | 4944 | 0.61 | 0.39 | 0.14 | 3.3085521297175E-36 | 1.114783554587E-31 |
| 72 | 9 | NPCa | Nephron progenitor cells a | wk11 | CCNG2 | 901 | 1593 | 0.61 | 0.53 | 0.34 | 3.9492578620689E-26 | 1.3306629440455E-21 |
| 72 | 9 | NPCa | Nephron progenitor cells a | wk11 | KLF7 | 8609 | 6350 | 0.6 | 0.34 | 0.17 | 5.813809679351E-20 | 1.9589050333605E-15 |
| 72 | 9 | NPCa | Nephron progenitor cells a | wk11 | DDAH2 | 23564 | 2716 | 0.6 | 0.89 | 0.74 | 4.8906166300866E-44 | 1.6478443673414E-39 |
| 72 | 9 | NPCa | Nephron progenitor cells a | wk11 | GAS1 | 2619 | 4165 | 0.6 | 0.67 | 0.41 | 3.463122417396E-33 | 1.1668644673174E-28 |
| 72 | 9 | NPCa | Nephron progenitor cells a | wk11 | SEPTIN6 | 23157 | 15848 | 0.6 | 0.59 | 0.36 | 7.1530147131402E-28 | 2.4101367774454E-23 |
| 72 | 9 | NPCa | Nephron progenitor cells a | wk11 | MYLIP | 29116 | 21155 | 0.6 | 0.51 | 0.35 | 1.9506025497277E-19 | 6.5723602310526E-15 |
| 72 | 9 | NPCa | Nephron progenitor cells a | wk11 | HOXB5 | 3215 | 5116 | 0.59 | 0.32 | 0.13 | 1.0693780841824E-24 | 3.6031625168443E-20 |
| 72 | 9 | NPCa | Nephron progenitor cells a | wk11 | CDH7 | 1005 | 1766 | 0.59 | 0.36 | 0.13 | 2.5891854614837E-32 | 8.7240014939232E-28 |
| 72 | 9 | NPCa | Nephron progenitor cells a | wk11 | CTNNB1 | 1499 | 2514 | 0.59 | 0.78 | 0.67 | 1.2987386327285E-25 | 4.3759699491152E-21 |
| 72 | 9 | NPCa | Nephron progenitor cells a | wk11 | MARCKSL1 | 65108 | 7142 | 0.58 | 1 | 0.89 | 3.5008524449932E-64 | 1.179577222816E-59 |
| 72 | 9 | NPCa | Nephron progenitor cells a | wk11 | NTRK2 | 4915 | 8032 | 0.58 | 0.68 | 0.42 | 2.3638491347527E-29 | 7.9647532746358E-25 |
| 72 | 9 | NPCa | Nephron progenitor cells a | wk11 | DAPL1 | 92196 | 21490 | 0.58 | 0.25 | 0.07 | 2.2062902769896E-31 | 7.4338744592889E-27 |
| 72 | 9 | NPCa | Nephron progenitor cells a | wk11 | COL9A2 | 1298 | 2218 | 0.58 | 0.38 | 0.17 | 3.9562850959211E-25 | 1.3330307002197E-20 |
| 72 | 9 | NPCa | Nephron progenitor cells a | wk11 | GFRA1 | 2674 | 4243 | 0.58 | 0.27 | 0.06 | 3.3401314790731E-43 | 1.1254239005589E-38 |
| 72 | 9 | NPCa | Nephron progenitor cells a | wk11 | AP1S2 | 8905 | 560 | 0.57 | 0.44 | 0.25 | 5.9562899256769E-22 | 2.0069123275576E-17 |
| 72 | 9 | NPCa | Nephron progenitor cells a | wk11 | SALL1 | 6299 | 10524 | 0.57 | 0.3 | 0.15 | 1.1915176880875E-17 | 4.0146996982422E-13 |
| 72 | 9 | NPCa | Nephron progenitor cells a | wk11 | STARD4-AS1 | 100505678 | 44117 | 0.57 | 0.36 | 0.16 | 2.6162839198875E-26 | 8.8153070396688E-22 |
| 72 | 9 | NPCa | Nephron progenitor cells a | wk11 | STOX2 | 56977 | 25450 | 0.56 | 0.24 | 0.06 | 9.931621434226E-37 | 3.3463605260481E-32 |
| 72 | 9 | NPCa | Nephron progenitor cells a | wk11 | RBPJ | 3516 | 5724 | 0.56 | 0.59 | 0.49 | 6.0314720664131E-18 | 2.0322441980572E-13 |
| 72 | 9 | NPCa | Nephron progenitor cells a | wk11 | STAT3 | 6774 | 11364 | 0.55 | 0.44 | 0.28 | 5.6477370586624E-17 | 1.9029485245457E-12 |
| 72 | 9 | NPCa | Nephron progenitor cells a | wk11 | ACSL3 | 2181 | 3570 | 0.55 | 0.5 | 0.37 | 2.0573217821189E-16 | 6.9319400126713E-12 |
| 72 | 9 | NPCa | Nephron progenitor cells a | wk11 | VCAN | 1462 | 2464 | 0.55 | 0.68 | 0.43 | 7.34467125423E-29 | 2.4747135324003E-24 |
| 72 | 9 | NPCa | Nephron progenitor cells a | wk11 | VGLL4 | 9686 | 28966 | 0.54 | 0.66 | 0.53 | 8.8363982688254E-24 | 2.977336032698E-19 |
| 72 | 9 | NPCa | Nephron progenitor cells a | wk11 | MEIS1 | 4211 | 7000 | 0.54 | 0.43 | 0.22 | 6.0059674453743E-23 | 2.0236506710444E-18 |
| 72 | 9 | NPCa | Nephron progenitor cells a | wk11 | ITM2C | 81618 | 6175 | 0.54 | 0.99 | 0.94 | 5.2117675156418E-60 | 1.7560529467204E-55 |
| 72 | 9 | NPCa | Nephron progenitor cells a | wk11 | HOXD1 | 3231 | 5132 | 0.53 | 0.46 | 0.28 | 2.816902959551E-18 | 9.4912728319111E-14 |
| 72 | 9 | NPCa | Nephron progenitor cells a | wk11 | CASC15 | 401237 | 28245 | 0.53 | 0.26 | 0.1 | 6.6869297347163E-22 | 2.2530941048153E-17 |
| 72 | 9 | NPCa | Nephron progenitor cells a | wk11 | PEG10 | 23089 | 14005 | 0.53 | 0.51 | 0.41 | 9.0220286043487E-12 | 3.0398823179493E-7 |
| 72 | 9 | NPCa | Nephron progenitor cells a | wk11 | HOXA11 | 3207 | 5101 | 0.53 | 0.33 | 0.16 | 1.3296361237071E-19 | 4.4800759552189E-15 |
| 72 | 9 | NPCa | Nephron progenitor cells a | wk11 | WSB1 | 26118 | 19221 | 0.53 | 0.87 | 0.8 | 2.4179336345177E-36 | 8.1469855881439E-32 |
| 72 | 9 | NPCa | Nephron progenitor cells a | wk11 | AKR1C2 | 1646 | 385 | 0.52 | 0.19 | 0.02 | 5.7937990518499E-61 | 1.9521626525303E-56 |
| 72 | 9 | NPCa | Nephron progenitor cells a | wk11 | FAT3 | 120114 | 23112 | 0.52 | 0.21 | 0.05 | 1.2898178715432E-29 | 4.3459123363776E-25 |
| 72 | 9 | NPCa | Nephron progenitor cells a | wk11 | CCNI | 10983 | 1595 | 0.52 | 0.99 | 0.93 | 8.0491289905239E-53 | 2.7120735220671E-48 |
| 72 | 9 | NPCa | Nephron progenitor cells a | wk11 | MFAP2 | 4237 | 7033 | 0.52 | 0.44 | 0.33 | 1.6110018168708E-11 | 5.4281095217646E-7 |
| 72 | 9 | NPCa | Nephron progenitor cells a | wk11 | PRKCB | 5579 | 9395 | 0.51 | 0.2 | 0.02 | 4.7184079323589E-57 | 1.589820368729E-52 |
| 72 | 9 | NPCa | Nephron progenitor cells a | wk11 | MMP23B | 8510 | 7171 | 0.51 | 0.68 | 0.44 | 3.172974889034E-24 | 1.0691021591111E-19 |
| 72 | 9 | NPCa | Nephron progenitor cells a | wk11 | LBH | 81606 | 29532 | 0.5 | 0.53 | 0.39 | 8.4236487530628E-16 | 2.838264210857E-11 |
| 72 | 9 | NPCa | Nephron progenitor cells a | wk11 | CCDC80 | 151887 | 30649 | 0.5 | 0.39 | 0.25 | 1.4439473220568E-12 | 4.8652361069381E-8 |
| 72 | 9 | NPCa | Nephron progenitor cells a | wk11 | UBE2E3 | 10477 | 12479 | 0.5 | 0.82 | 0.74 | 6.4454075268971E-25 | 2.1717156121127E-20 |
| 72 | 9 | NPCa | Nephron progenitor cells a | wk11 | CACUL1 | 143384 | 23727 | 0.5 | 0.43 | 0.32 | 7.2386295032552E-13 | 2.4389838248268E-8 |
| 72 | 9 | NPCa | Nephron progenitor cells a | wk11 | COL6A1 | 1291 | 2211 | 0.49 | 0.5 | 0.33 | 5.0143332521059E-18 | 1.6895294459646E-13 |
| 72 | 9 | NPCa | Nephron progenitor cells a | wk11 | TNFRSF19 | 55504 | 11915 | 0.49 | 0.29 | 0.17 | 8.0945886362376E-11 | 2.7273906950939E-6 |
| 72 | 9 | NPCa | Nephron progenitor cells a | wk11 | ITGA8 | 8516 | 6144 | 0.49 | 0.31 | 0.11 | 2.1805925304081E-26 | 7.347288471957E-22 |
| 72 | 9 | NPCa | Nephron progenitor cells a | wk11 | SPRY1 | 10252 | 11269 | 0.48 | 0.33 | 0.19 | 5.869063791913E-15 | 1.9775223540472E-10 |
| 72 | 9 | NPCa | Nephron progenitor cells a | wk11 | RBFOX2 | 23543 | 9906 | 0.48 | 0.46 | 0.33 | 3.4879328285288E-15 | 1.1752240872445E-10 |
| 72 | 9 | NPCa | Nephron progenitor cells a | wk11 | RAB20 | 55647 | 18260 | 0.48 | 0.23 | 0.05 | 9.2988098428728E-37 | 3.1331409884576E-32 |