Marker Genes
Dataset: Single-cell transcriptomics reveals gene expression dynamics of human fetal kidney development
- tissue: Kidney
- ontology: Kidney
- genotype: -
- stage: Fetal
- treatment condition: WT
- cell/nucleus: Cells
- pmid: 30789893
- subset name: wk11
- total genes: Not reported
- clustering: scran
- pseudotime: Monocle 2
- link: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE114530
Rows:100
dataset id | cluster id | cluster name | cell type name | sample id | gene symbol | entrez geneid | species specific geneid |
avg log fc (?)
|
pct 1 | pct 2 | p value | padj |
---|---|---|---|---|---|---|---|---|---|---|---|---|
72 | 9 | NPCa | Nephron progenitor cells a | wk11 | RSPO3 | 84870 | 20866 | 1.56 | 0.78 | 0.15 | 6.72443510741168e-185 | 2.26573116509129e-180 |
72 | 9 | NPCa | Nephron progenitor cells a | wk11 | PHLDA1 | 22822 | 8933 | 1.44 | 0.82 | 0.29 | 1.51877146179496e-130 | 5.11734856337194e-126 |
72 | 9 | NPCa | Nephron progenitor cells a | wk11 | LRATD1 | 151354 | 20743 | 1.32 | 0.71 | 0.19 | 4.42142772523353e-129 | 1.48975585774018e-124 |
72 | 9 | NPCa | Nephron progenitor cells a | wk11 | NKAIN3 | 286183 | 26829 | 1.29 | 0.73 | 0.16 | 1.05164340439678e-154 | 3.54340728677451e-150 |
72 | 9 | NPCa | Nephron progenitor cells a | wk11 | SHISA3 | 152573 | 25159 | 1.24 | 0.71 | 0.2 | 2.33325777827887e-114 | 7.86167875813282e-110 |
72 | 9 | NPCa | Nephron progenitor cells a | wk11 | MEOX1 | 4222 | 7013 | 1.07 | 0.56 | 0.11 | 1.74725797843321e-120 | 5.88721103253287e-116 |
72 | 9 | NPCa | Nephron progenitor cells a | wk11 | PRXL2A | 84293 | 28651 | 1.07 | 0.92 | 0.57 | 1.21269524678828e-99 | 4.08605536452842e-95 |
72 | 9 | NPCa | Nephron progenitor cells a | wk11 | NNAT | 4826 | 7860 | 1.06 | 0.8 | 0.3 | 1.87973577637974e-91 | 6.33358172493388e-87 |
72 | 9 | NPCa | Nephron progenitor cells a | wk11 | TMEM100 | 55273 | 25607 | 1 | 0.65 | 0.25 | 1.1277134722902e-64 | 3.7997177735346e-60 |
72 | 9 | NPCa | Nephron progenitor cells a | wk11 | BMPER | 168667 | 24154 | 0.99 | 0.58 | 0.13 | 3.31494380868422e-109 | 1.11693716689806e-104 |
72 | 9 | NPCa | Nephron progenitor cells a | wk11 | WASF3 | 10810 | 12734 | 0.94 | 0.65 | 0.27 | 8.11151593521192e-70 | 2.73309417921031e-65 |
72 | 9 | NPCa | Nephron progenitor cells a | wk11 | EYA1 | 2138 | 3519 | 0.94 | 0.55 | 0.17 | 1.24281131561913e-73 | 4.18752844684709e-69 |
72 | 9 | NPCa | Nephron progenitor cells a | wk11 | TPM1 | 7168 | 12010 | 0.94 | 0.86 | 0.5 | 3.85519016748743e-73 | 1.29896777503321e-68 |
72 | 9 | NPCa | Nephron progenitor cells a | wk11 | SCG5 | 6447 | 10816 | 0.91 | 0.61 | 0.21 | 7.63049413686893e-76 | 2.57101869447662e-71 |
72 | 9 | NPCa | Nephron progenitor cells a | wk11 | SLC15A1 | 6564 | 10920 | 0.91 | 0.47 | 0.11 | 7.03357970990921e-77 | 2.36989434745681e-72 |
72 | 9 | NPCa | Nephron progenitor cells a | wk11 | TUBA1A | 7846 | 20766 | 0.88 | 0.99 | 0.76 | 1.11188724235601e-83 | 3.74639287439435e-79 |
72 | 9 | NPCa | Nephron progenitor cells a | wk11 | NR2F2 | 7026 | 7976 | 0.87 | 0.92 | 0.69 | 9.26678754148568e-73 | 3.12235139422818e-68 |
72 | 9 | NPCa | Nephron progenitor cells a | wk11 | NREP | 9315 | 16834 | 0.87 | 0.95 | 0.76 | 3.40889101088943e-83 | 1.14859173720908e-78 |
72 | 9 | NPCa | Nephron progenitor cells a | wk11 | SOCS3 | 9021 | 19391 | 0.85 | 0.62 | 0.35 | 1.95491402549333e-37 | 6.58688731749722e-33 |
72 | 9 | NPCa | Nephron progenitor cells a | wk11 | SIX1 | 6495 | 10887 | 0.85 | 0.5 | 0.15 | 6.71150046853385e-64 | 2.26137296786779e-59 |
72 | 9 | NPCa | Nephron progenitor cells a | wk11 | NBL1 | 4681 | 7650 | 0.85 | 0.49 | 0.17 | 2.04579038468655e-56 | 6.89308612216286e-52 |
72 | 9 | NPCa | Nephron progenitor cells a | wk11 | SOX11 | 6664 | 11191 | 0.83 | 0.62 | 0.38 | 4.21789880891179e-32 | 1.42117882467474e-27 |
72 | 9 | NPCa | Nephron progenitor cells a | wk11 | HOXB9 | 3219 | 5120 | 0.83 | 0.54 | 0.19 | 2.48786876514077e-57 | 8.3826250172653e-53 |
72 | 9 | NPCa | Nephron progenitor cells a | wk11 | ENSG00000273015 | NULL | 0.82 | 0.56 | 0.3 | 2.44093915740132e-40 | 8.224500396948e-36 | |
72 | 9 | NPCa | Nephron progenitor cells a | wk11 | CHRNA1 | 1134 | 1955 | 0.82 | 0.36 | 0.04 | 3.25303862767979e-112 | 1.09607883521043e-107 |
72 | 9 | NPCa | Nephron progenitor cells a | wk11 | CRABP2 | 1382 | 2339 | 0.82 | 0.75 | 0.31 | 1.16422129996253e-63 | 3.92272724809375e-59 |
72 | 9 | NPCa | Nephron progenitor cells a | wk11 | HOXB-AS3 | 404266 | 40283 | 0.81 | 0.45 | 0.15 | 1.3619986742527e-48 | 4.58911833302705e-44 |
72 | 9 | NPCa | Nephron progenitor cells a | wk11 | CITED1 | 4435 | 1986 | 0.77 | 0.41 | 0.12 | 6.45605344916004e-51 | 2.17530264915999e-46 |
72 | 9 | NPCa | Nephron progenitor cells a | wk11 | LAMA4 | 3910 | 6484 | 0.76 | 0.43 | 0.15 | 1.30438740252585e-48 | 4.39500291407059e-44 |
72 | 9 | NPCa | Nephron progenitor cells a | wk11 | NCAM1 | 4684 | 7656 | 0.74 | 0.45 | 0.17 | 5.30816735177497e-41 | 1.78853390750706e-36 |
72 | 9 | NPCa | Nephron progenitor cells a | wk11 | NR2F1 | 7025 | 7975 | 0.74 | 0.73 | 0.49 | 3.97527613912837e-42 | 1.33942954231791e-37 |
72 | 9 | NPCa | Nephron progenitor cells a | wk11 | MEIS2 | 4212 | 7001 | 0.73 | 0.66 | 0.36 | 7.46053378549676e-43 | 2.51375225368528e-38 |
72 | 9 | NPCa | Nephron progenitor cells a | wk11 | IGF2 | 3481 | 5466 | 0.73 | 0.92 | 0.53 | 1.03615618403002e-61 | 3.49122464647074e-57 |
72 | 9 | NPCa | Nephron progenitor cells a | wk11 | HOXC6 | 3223 | 5128 | 0.72 | 0.44 | 0.18 | 1.73261576220543e-37 | 5.83787554917496e-33 |
72 | 9 | NPCa | Nephron progenitor cells a | wk11 | NPTX2 | 4885 | 7953 | 0.72 | 0.27 | 0.03 | 4.53453805865424e-88 | 1.52786725348296e-83 |
72 | 9 | NPCa | Nephron progenitor cells a | wk11 | SOX4 | 6659 | 11200 | 0.72 | 0.93 | 0.71 | 9.82319524866509e-52 | 3.30982740708521e-47 |
72 | 9 | NPCa | Nephron progenitor cells a | wk11 | SIX2 | 10736 | 10888 | 0.72 | 0.42 | 0.13 | 3.75782177006775e-49 | 1.26616046720663e-44 |
72 | 9 | NPCa | Nephron progenitor cells a | wk11 | PDGFC | 56034 | 8801 | 0.71 | 0.5 | 0.25 | 1.45144153215386e-34 | 4.89048709843922e-30 |
72 | 9 | NPCa | Nephron progenitor cells a | wk11 | ST8SIA4 | 7903 | 10871 | 0.71 | 0.32 | 0.05 | 8.35549806990984e-75 | 2.81530151967542e-70 |
72 | 9 | NPCa | Nephron progenitor cells a | wk11 | HOXA10 | 3206 | 5100 | 0.7 | 0.79 | 0.61 | 5.58819076310367e-41 | 1.88288499572015e-36 |
72 | 9 | NPCa | Nephron progenitor cells a | wk11 | COL2A1 | 1280 | 2200 | 0.69 | 0.5 | 0.21 | 1.3146656541409e-41 | 4.42963445506236e-37 |
72 | 9 | NPCa | Nephron progenitor cells a | wk11 | TRIL | 9865 | 22200 | 0.69 | 0.42 | 0.16 | 3.91820142827439e-37 | 1.32019878924277e-32 |
72 | 9 | NPCa | Nephron progenitor cells a | wk11 | RSPO1 | 284654 | 21679 | 0.68 | 0.27 | 0.06 | 4.04993202794484e-45 | 1.36458409749573e-40 |
72 | 9 | NPCa | Nephron progenitor cells a | wk11 | PCBP4 | 57060 | 8652 | 0.68 | 0.49 | 0.26 | 2.03847047588999e-30 | 6.86842242146373e-26 |
72 | 9 | NPCa | Nephron progenitor cells a | wk11 | DDIT4 | 54541 | 24944 | 0.68 | 0.67 | 0.44 | 2.38601341538936e-33 | 8.03943360181291e-29 |
72 | 9 | NPCa | Nephron progenitor cells a | wk11 | PCSK1N | 27344 | 17301 | 0.67 | 0.51 | 0.27 | 2.02160197040826e-30 | 6.8115856790936e-26 |
72 | 9 | NPCa | Nephron progenitor cells a | wk11 | ETV1 | 2115 | 3490 | 0.67 | 0.36 | 0.11 | 1.09361119848932e-44 | 3.6848135721899e-40 |
72 | 9 | NPCa | Nephron progenitor cells a | wk11 | OSR1 | 130497 | 8111 | 0.66 | 0.29 | 0.06 | 3.69619900805566e-48 | 1.24539729377427e-43 |
72 | 9 | NPCa | Nephron progenitor cells a | wk11 | NUDT4 | 11163 | 8051 | 0.66 | 0.53 | 0.33 | 4.13088109369272e-26 | 1.39185907570882e-21 |
72 | 9 | NPCa | Nephron progenitor cells a | wk11 | ETV5 | 2119 | 3494 | 0.66 | 0.35 | 0.1 | 2.73437638961065e-47 | 9.21320780715411e-43 |
72 | 9 | NPCa | Nephron progenitor cells a | wk11 | PDLIM1 | 9124 | 2067 | 0.65 | 0.49 | 0.26 | 1.47580816121275e-29 | 4.97258801839023e-25 |
72 | 9 | NPCa | Nephron progenitor cells a | wk11 | TCF7L2 | 6934 | 11641 | 0.65 | 0.53 | 0.3 | 1.93000691795673e-30 | 6.5029653093634e-26 |
72 | 9 | NPCa | Nephron progenitor cells a | wk11 | CADM1 | 23705 | 5951 | 0.63 | 0.74 | 0.46 | 7.85949292954241e-34 | 2.64817754768002e-29 |
72 | 9 | NPCa | Nephron progenitor cells a | wk11 | HLA-DQB1 | 3119 | 4944 | 0.61 | 0.39 | 0.14 | 3.30855212971745e-36 | 1.114783554587e-31 |
72 | 9 | NPCa | Nephron progenitor cells a | wk11 | CCNG2 | 901 | 1593 | 0.61 | 0.53 | 0.34 | 3.94925786206894e-26 | 1.33066294404551e-21 |
72 | 9 | NPCa | Nephron progenitor cells a | wk11 | KLF7 | 8609 | 6350 | 0.6 | 0.34 | 0.17 | 5.813809679351e-20 | 1.95890503336053e-15 |
72 | 9 | NPCa | Nephron progenitor cells a | wk11 | DDAH2 | 23564 | 2716 | 0.6 | 0.89 | 0.74 | 4.89061663008655e-44 | 1.64784436734136e-39 |
72 | 9 | NPCa | Nephron progenitor cells a | wk11 | GAS1 | 2619 | 4165 | 0.6 | 0.67 | 0.41 | 3.46312241739604e-33 | 1.16686446731742e-28 |
72 | 9 | NPCa | Nephron progenitor cells a | wk11 | SEPTIN6 | 23157 | 15848 | 0.6 | 0.59 | 0.36 | 7.15301471314018e-28 | 2.41013677744545e-23 |
72 | 9 | NPCa | Nephron progenitor cells a | wk11 | MYLIP | 29116 | 21155 | 0.6 | 0.51 | 0.35 | 1.95060254972772e-19 | 6.57236023105257e-15 |
72 | 9 | NPCa | Nephron progenitor cells a | wk11 | HOXB5 | 3215 | 5116 | 0.59 | 0.32 | 0.13 | 1.06937808418242e-24 | 3.60316251684425e-20 |
72 | 9 | NPCa | Nephron progenitor cells a | wk11 | CDH7 | 1005 | 1766 | 0.59 | 0.36 | 0.13 | 2.58918546148371e-32 | 8.72400149392321e-28 |
72 | 9 | NPCa | Nephron progenitor cells a | wk11 | CTNNB1 | 1499 | 2514 | 0.59 | 0.78 | 0.67 | 1.29873863272845e-25 | 4.37596994911525e-21 |
72 | 9 | NPCa | Nephron progenitor cells a | wk11 | MARCKSL1 | 65108 | 7142 | 0.58 | 1 | 0.89 | 3.50085244499323e-64 | 1.17957722281602e-59 |
72 | 9 | NPCa | Nephron progenitor cells a | wk11 | NTRK2 | 4915 | 8032 | 0.58 | 0.68 | 0.42 | 2.36384913475271e-29 | 7.96475327463578e-25 |
72 | 9 | NPCa | Nephron progenitor cells a | wk11 | DAPL1 | 92196 | 21490 | 0.58 | 0.25 | 0.07 | 2.20629027698963e-31 | 7.43387445928887e-27 |
72 | 9 | NPCa | Nephron progenitor cells a | wk11 | COL9A2 | 1298 | 2218 | 0.58 | 0.38 | 0.17 | 3.9562850959211e-25 | 1.33303070021966e-20 |
72 | 9 | NPCa | Nephron progenitor cells a | wk11 | GFRA1 | 2674 | 4243 | 0.58 | 0.27 | 0.06 | 3.3401314790731e-43 | 1.12542390055889e-38 |
72 | 9 | NPCa | Nephron progenitor cells a | wk11 | AP1S2 | 8905 | 560 | 0.57 | 0.44 | 0.25 | 5.95628992567695e-22 | 2.00691232755759e-17 |
72 | 9 | NPCa | Nephron progenitor cells a | wk11 | SALL1 | 6299 | 10524 | 0.57 | 0.3 | 0.15 | 1.19151768808755e-17 | 4.0146996982422e-13 |
72 | 9 | NPCa | Nephron progenitor cells a | wk11 | STARD4-AS1 | 100505678 | 44117 | 0.57 | 0.36 | 0.16 | 2.61628391988747e-26 | 8.81530703966883e-22 |
72 | 9 | NPCa | Nephron progenitor cells a | wk11 | STOX2 | 56977 | 25450 | 0.56 | 0.24 | 0.06 | 9.93162143422596e-37 | 3.3463605260481e-32 |
72 | 9 | NPCa | Nephron progenitor cells a | wk11 | RBPJ | 3516 | 5724 | 0.56 | 0.59 | 0.49 | 6.03147206641313e-18 | 2.03224419805724e-13 |
72 | 9 | NPCa | Nephron progenitor cells a | wk11 | STAT3 | 6774 | 11364 | 0.55 | 0.44 | 0.28 | 5.64773705866244e-17 | 1.90294852454572e-12 |
72 | 9 | NPCa | Nephron progenitor cells a | wk11 | ACSL3 | 2181 | 3570 | 0.55 | 0.5 | 0.37 | 2.05732178211886e-16 | 6.93194001267128e-12 |
72 | 9 | NPCa | Nephron progenitor cells a | wk11 | VCAN | 1462 | 2464 | 0.55 | 0.68 | 0.43 | 7.34467125423005e-29 | 2.47471353240027e-24 |
72 | 9 | NPCa | Nephron progenitor cells a | wk11 | VGLL4 | 9686 | 28966 | 0.54 | 0.66 | 0.53 | 8.83639826882537e-24 | 2.97733603269802e-19 |
72 | 9 | NPCa | Nephron progenitor cells a | wk11 | MEIS1 | 4211 | 7000 | 0.54 | 0.43 | 0.22 | 6.00596744537427e-23 | 2.02365067104441e-18 |
72 | 9 | NPCa | Nephron progenitor cells a | wk11 | ITM2C | 81618 | 6175 | 0.54 | 0.99 | 0.94 | 5.21176751564184e-60 | 1.75605294672036e-55 |
72 | 9 | NPCa | Nephron progenitor cells a | wk11 | HOXD1 | 3231 | 5132 | 0.53 | 0.46 | 0.28 | 2.81690295955097e-18 | 9.49127283191105e-14 |
72 | 9 | NPCa | Nephron progenitor cells a | wk11 | CASC15 | 401237 | 28245 | 0.53 | 0.26 | 0.1 | 6.68692973471635e-22 | 2.25309410481533e-17 |
72 | 9 | NPCa | Nephron progenitor cells a | wk11 | PEG10 | 23089 | 14005 | 0.53 | 0.51 | 0.41 | 9.02202860434868e-12 | 3.03988231794925e-07 |
72 | 9 | NPCa | Nephron progenitor cells a | wk11 | HOXA11 | 3207 | 5101 | 0.53 | 0.33 | 0.16 | 1.32963612370715e-19 | 4.48007595521887e-15 |
72 | 9 | NPCa | Nephron progenitor cells a | wk11 | WSB1 | 26118 | 19221 | 0.53 | 0.87 | 0.8 | 2.41793363451768e-36 | 8.14698558814387e-32 |
72 | 9 | NPCa | Nephron progenitor cells a | wk11 | AKR1C2 | 1646 | 385 | 0.52 | 0.19 | 0.02 | 5.79379905184995e-61 | 1.95216265253032e-56 |
72 | 9 | NPCa | Nephron progenitor cells a | wk11 | FAT3 | 120114 | 23112 | 0.52 | 0.21 | 0.05 | 1.28981787154318e-29 | 4.3459123363776e-25 |
72 | 9 | NPCa | Nephron progenitor cells a | wk11 | CCNI | 10983 | 1595 | 0.52 | 0.99 | 0.93 | 8.04912899052393e-53 | 2.71207352206713e-48 |
72 | 9 | NPCa | Nephron progenitor cells a | wk11 | MFAP2 | 4237 | 7033 | 0.52 | 0.44 | 0.33 | 1.61100181687083e-11 | 5.42810952176456e-07 |
72 | 9 | NPCa | Nephron progenitor cells a | wk11 | PRKCB | 5579 | 9395 | 0.51 | 0.2 | 0.02 | 4.71840793235893e-57 | 1.58982036872902e-52 |
72 | 9 | NPCa | Nephron progenitor cells a | wk11 | MMP23B | 8510 | 7171 | 0.51 | 0.68 | 0.44 | 3.17297488903402e-24 | 1.06910215911112e-19 |
72 | 9 | NPCa | Nephron progenitor cells a | wk11 | LBH | 81606 | 29532 | 0.5 | 0.53 | 0.39 | 8.42364875306282e-16 | 2.83826421085699e-11 |
72 | 9 | NPCa | Nephron progenitor cells a | wk11 | CCDC80 | 151887 | 30649 | 0.5 | 0.39 | 0.25 | 1.44394732205678e-12 | 4.86523610693811e-08 |
72 | 9 | NPCa | Nephron progenitor cells a | wk11 | UBE2E3 | 10477 | 12479 | 0.5 | 0.82 | 0.74 | 6.44540752689708e-25 | 2.1717156121127e-20 |
72 | 9 | NPCa | Nephron progenitor cells a | wk11 | CACUL1 | 143384 | 23727 | 0.5 | 0.43 | 0.32 | 7.23862950325521e-13 | 2.43898382482681e-08 |
72 | 9 | NPCa | Nephron progenitor cells a | wk11 | COL6A1 | 1291 | 2211 | 0.49 | 0.5 | 0.33 | 5.01433325210591e-18 | 1.68952944596457e-13 |
72 | 9 | NPCa | Nephron progenitor cells a | wk11 | TNFRSF19 | 55504 | 11915 | 0.49 | 0.29 | 0.17 | 8.09458863623761e-11 | 2.7273906950939e-06 |
72 | 9 | NPCa | Nephron progenitor cells a | wk11 | ITGA8 | 8516 | 6144 | 0.49 | 0.31 | 0.11 | 2.18059253040807e-26 | 7.34728847195695e-22 |
72 | 9 | NPCa | Nephron progenitor cells a | wk11 | SPRY1 | 10252 | 11269 | 0.48 | 0.33 | 0.19 | 5.86906379191303e-15 | 1.97752235404718e-10 |
72 | 9 | NPCa | Nephron progenitor cells a | wk11 | RBFOX2 | 23543 | 9906 | 0.48 | 0.46 | 0.33 | 3.48793282852879e-15 | 1.17522408724449e-10 |
72 | 9 | NPCa | Nephron progenitor cells a | wk11 | RAB20 | 55647 | 18260 | 0.48 | 0.23 | 0.05 | 9.29880984287281e-37 | 3.13314098845756e-32 |