Marker Genes
Dataset: Single-cell transcriptomics reveals gene expression dynamics of human fetal kidney development
- tissue: Kidney
- ontology: Kidney
- genotype: -
- stage: Fetal
- treatment condition: WT
- cell/nucleus: Cells
- pmid: 30789893
- subset name: wk11
- total genes: Not reported
- clustering: scran
- pseudotime: Monocle 2
- link: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE114530
Rows:100
dataset id | cluster id | cluster name | cell type name | sample id | gene symbol | entrez geneid | species specific geneid |
avg log fc (?)
|
pct 1 | pct 2 | p value | padj |
---|---|---|---|---|---|---|---|---|---|---|---|---|
72 | 8 | Mes | Mesangial cells | wk11 | CDH5 | 1003 | 1764 | 1.62 | 0.25 | 0.009 | 2.00809158909075e-07 | 0.00676606380028236 |
72 | 8 | Mes | Mesangial cells | wk11 | LDB2 | 9079 | 6533 | 1.59 | 0.75 | 0.06 | 2.67884348910502e-08 | 0.000902609525219046 |
72 | 8 | Mes | Mesangial cells | wk11 | EMCN | 51705 | 16041 | 1.44 | 0.75 | 0.05 | 1.92086853933625e-09 | 6.47217445643957e-05 |
72 | 8 | Mes | Mesangial cells | wk11 | SLC2A3 | 6515 | 11007 | 1.21 | 0.75 | 0.07 | 2.87833643408595e-07 | 0.0096982667810092 |
72 | 8 | Mes | Mesangial cells | wk11 | COL21A1 | 81578 | 17025 | 1.2 | 0.75 | 0.05 | 3.01492556706247e-10 | 1.01584902056603e-05 |
72 | 8 | Mes | Mesangial cells | wk11 | DNM3OS | 100628315 | 41228 | 1.2 | 0.5 | 0.02 | 8.95330428376791e-09 | 0.000301672634537276 |
72 | 8 | Mes | Mesangial cells | wk11 | CD34 | 947 | 1662 | 1.19 | 0.25 | 0.009 | 2.13020453750684e-07 | 0.00717751116867556 |
72 | 8 | Mes | Mesangial cells | wk11 | AGTR1 | 185 | 336 | 1.18 | 0.5 | 0.02 | 9.82909103712052e-10 | 3.31181393404739e-05 |
72 | 8 | Mes | Mesangial cells | wk11 | APLNR | 187 | 339 | 1.17 | 0.25 | 0.009 | 7.69427195878403e-07 | 0.02 |
72 | 8 | Mes | Mesangial cells | wk11 | RAMP2 | 10266 | 9844 | 1.17 | 0.75 | 0.07 | 7.13987071175549e-08 | 0.00240570803761889 |
72 | 8 | Mes | Mesangial cells | wk11 | TFPI | 7035 | 11760 | 1.11 | 0.75 | 0.04 | 2.78777948589059e-11 | 9.39314419975974e-07 |
72 | 8 | Mes | Mesangial cells | wk11 | NFAT5 | 10725 | 7774 | 1.1 | 1 | 0.14 | 3.56031783704754e-07 | 0.01 |
72 | 8 | Mes | Mesangial cells | wk11 | LDLRAD4 | 753 | 1224 | 1.01 | 0.75 | 0.02 | 3.40032729428351e-22 | 1.14570627853589e-17 |
72 | 8 | Mes | Mesangial cells | wk11 | TTN-AS1 | 100506866 | 44124 | 0.99 | 0.75 | 0.03 | 3.76348255494363e-16 | 1.26806781206271e-11 |
72 | 8 | Mes | Mesangial cells | wk11 | ARHGDIB | 397 | 679 | 0.99 | 0.75 | 0.02 | 8.91576582160469e-23 | 3.00407813593149e-18 |
72 | 8 | Mes | Mesangial cells | wk11 | MAST2 | 23139 | 19035 | 0.99 | 0.75 | 0.03 | 1.32001125910065e-13 | 4.44764593641372e-09 |
72 | 8 | Mes | Mesangial cells | wk11 | RASD1 | 51655 | 15828 | 0.99 | 0.75 | 0.03 | 8.73404473867374e-16 | 2.94284903424873e-11 |
72 | 8 | Mes | Mesangial cells | wk11 | ABHD5 | 51099 | 21396 | 0.98 | 0.75 | 0.04 | 4.77512336602188e-12 | 1.60893006694741e-07 |
72 | 8 | Mes | Mesangial cells | wk11 | EIF3C | 8663 | 3279 | 0.98 | 0.75 | 0.04 | 1.16163349294138e-12 | 3.91400789111667e-08 |
72 | 8 | Mes | Mesangial cells | wk11 | MAP4K4 | 9448 | 6866 | 0.98 | 1 | 0.13 | 2.07985510012366e-07 | 0.00700786377435667 |
72 | 8 | Mes | Mesangial cells | wk11 | PXN-AS1 | 100506649 | 44123 | 0.97 | 0.75 | 0.05 | 1.32566912103129e-10 | 4.46670953640283e-06 |
72 | 8 | Mes | Mesangial cells | wk11 | GATA3 | 2625 | 4172 | 0.95 | 0.5 | 0.03 | 8.72862518417161e-08 | 0.00294102296955478 |
72 | 8 | Mes | Mesangial cells | wk11 | ITGA1 | 3672 | 6134 | 0.95 | 0.75 | 0.05 | 9.62129802526679e-11 | 3.24180015663339e-06 |
72 | 8 | Mes | Mesangial cells | wk11 | PIGB | 9488 | 8959 | 0.94 | 0.75 | 0.06 | 4.14676111365967e-09 | 0.000139720968963649 |
72 | 8 | Mes | Mesangial cells | wk11 | ENSG00000273702 | NULL | 0.93 | 0.75 | 0.06 | 3.39058195823885e-08 | 0.001142422685009 | |
72 | 8 | Mes | Mesangial cells | wk11 | ZNF117 | 51351 | 12897 | 0.92 | 0.75 | 0.07 | 7.19575665523559e-08 | 0.00242453824741508 |
72 | 8 | Mes | Mesangial cells | wk11 | ERCC5 | 2073 | 3437 | 0.92 | 0.75 | 0.07 | 8.14881614942044e-08 | 0.00274566211338572 |
72 | 8 | Mes | Mesangial cells | wk11 | LOC101927480 | 101927480 | NULL | 0.92 | 0.75 | 0.07 | 1.30934502399857e-07 | 0.00441170712386079 |
72 | 8 | Mes | Mesangial cells | wk11 | HIST1H1C | 3006 | 4716 | 0.92 | 0.75 | 0.06 | 2.03260822255313e-08 | 0.000684867014507052 |
72 | 8 | Mes | Mesangial cells | wk11 | DGKZ | 8525 | 2857 | 0.92 | 0.75 | 0.07 | 1.44969033255495e-07 | 0.00488458660651065 |
72 | 8 | Mes | Mesangial cells | wk11 | SNX29 | 92017 | 30542 | 0.91 | 0.75 | 0.07 | 2.79430978320843e-07 | 0.00941514738354249 |
72 | 8 | Mes | Mesangial cells | wk11 | TEX261 | 113419 | 30712 | 0.9 | 0.75 | 0.08 | 1.35131419259738e-06 | 0.04 |
72 | 8 | Mes | Mesangial cells | wk11 | MGLL | 11343 | 17038 | 0.87 | 0.75 | 0.08 | 8.56445620883252e-07 | 0.02 |
72 | 8 | Mes | Mesangial cells | wk11 | LINC02104 | 101926940 | 52959 | 0.83 | 0.5 | 0.001 | 1.08651650289278e-212 | 3.66090870484693e-208 |
72 | 8 | Mes | Mesangial cells | wk11 | ENSG00000270016 | NULL | 0.83 | 0.5 | 0.003 | 1.03345223777967e-67 | 3.48211396997481e-63 | |
72 | 8 | Mes | Mesangial cells | wk11 | ZNF469 | 84627 | 23216 | 0.82 | 0.5 | 0.004 | 5.68835903236434e-52 | 1.91663569236484e-47 |
72 | 8 | Mes | Mesangial cells | wk11 | ENSG00000231324 | NULL | 0.82 | 0.5 | 0.004 | 1.63510005425182e-54 | 5.50930612279607e-50 | |
72 | 8 | Mes | Mesangial cells | wk11 | CARD14 | 79092 | 16446 | 0.82 | 0.5 | 0.005 | 2.96297763448146e-39 | 9.98345684162182e-35 |
72 | 8 | Mes | Mesangial cells | wk11 | TXLNB | 167838 | 21617 | 0.81 | 0.5 | 0.007 | 9.25562122101805e-30 | 3.11858901420982e-25 |
72 | 8 | Mes | Mesangial cells | wk11 | LENG9 | 94059 | 16306 | 0.81 | 0.5 | 0.007 | 1.55634706740567e-30 | 5.24395580891665e-26 |
72 | 8 | Mes | Mesangial cells | wk11 | PRDM10 | 56980 | 13995 | 0.81 | 0.5 | 0.01 | 1.84360977724328e-18 | 6.2118587834435e-14 |
72 | 8 | Mes | Mesangial cells | wk11 | ENSG00000231025 | NULL | 0.81 | 0.5 | 0.01 | 1.23765177216107e-18 | 4.1701438811195e-14 | |
72 | 8 | Mes | Mesangial cells | wk11 | KANK4 | 163782 | 27263 | 0.8 | 0.5 | 0.008 | 1.84507970805925e-26 | 6.21681156833485e-22 |
72 | 8 | Mes | Mesangial cells | wk11 | LOC100132215 | 100132215 | NULL | 0.8 | 0.5 | 0.01 | 7.18155853912748e-15 | 2.41975433417361e-10 |
72 | 8 | Mes | Mesangial cells | wk11 | ZNF707 | 286075 | 27815 | 0.8 | 0.5 | 0.01 | 3.32487229619061e-13 | 1.12028247147846e-08 |
72 | 8 | Mes | Mesangial cells | wk11 | CCDC68 | 80323 | 24350 | 0.8 | 0.5 | 0.01 | 2.90310359158987e-17 | 9.78171724150291e-13 |
72 | 8 | Mes | Mesangial cells | wk11 | RHOJ | 57381 | 688 | 0.8 | 0.5 | 0.01 | 8.62415233764581e-22 | 2.90582188864638e-17 |
72 | 8 | Mes | Mesangial cells | wk11 | CSPG4 | 1464 | 2466 | 0.8 | 0.5 | 0.01 | 7.06548612449816e-18 | 2.38064489478841e-13 |
72 | 8 | Mes | Mesangial cells | wk11 | SALL3 | 27164 | 10527 | 0.79 | 0.25 | 0.006 | 3.74954294752781e-10 | 1.26337100074002e-05 |
72 | 8 | Mes | Mesangial cells | wk11 | GASK1B | 51313 | 25312 | 0.79 | 0.5 | 0.01 | 2.34841481101052e-18 | 7.91274886421886e-14 |
72 | 8 | Mes | Mesangial cells | wk11 | DAPK2 | 23604 | 2675 | 0.79 | 0.5 | 0.01 | 3.44767952931283e-14 | 1.16166114060666e-09 |
72 | 8 | Mes | Mesangial cells | wk11 | CCN4 | 8840 | 12769 | 0.79 | 0.5 | 0.01 | 3.0091228153396e-17 | 1.01389384140053e-12 |
72 | 8 | Mes | Mesangial cells | wk11 | HLX | 3142 | 4978 | 0.79 | 0.25 | 0.004 | 2.37445263060308e-15 | 8.00048069355401e-11 |
72 | 8 | Mes | Mesangial cells | wk11 | RNF215 | 200312 | 33434 | 0.79 | 0.5 | 0.01 | 1.21027174447101e-12 | 4.07788961582064e-08 |
72 | 8 | Mes | Mesangial cells | wk11 | GNA14 | 9630 | 4382 | 0.79 | 0.5 | 0.01 | 1.76067254259134e-18 | 5.93241006500725e-14 |
72 | 8 | Mes | Mesangial cells | wk11 | CDAN1 | 146059 | 1713 | 0.79 | 0.5 | 0.02 | 9.93079868734732e-11 | 3.34608330971481e-06 |
72 | 8 | Mes | Mesangial cells | wk11 | CD40 | 958 | 11919 | 0.78 | 0.25 | 0.004 | 2.63993704198055e-15 | 8.89500386924927e-11 |
72 | 8 | Mes | Mesangial cells | wk11 | FOXP4 | 116113 | 20842 | 0.78 | 0.5 | 0.02 | 1.70397587330653e-10 | 5.74137630751901e-06 |
72 | 8 | Mes | Mesangial cells | wk11 | CRHBP | 1393 | 2356 | 0.78 | 0.25 | 0.004 | 1.43758985691053e-14 | 4.84381526387436e-10 |
72 | 8 | Mes | Mesangial cells | wk11 | C22orf46 | 79640 | 26294 | 0.78 | 0.5 | 0.02 | 3.66539203825113e-10 | 1.23501719336833e-05 |
72 | 8 | Mes | Mesangial cells | wk11 | MCTP2 | 55784 | 25636 | 0.78 | 0.5 | 0.01 | 3.09454686366254e-13 | 1.04267662024246e-08 |
72 | 8 | Mes | Mesangial cells | wk11 | GIMAP7 | 168537 | 22404 | 0.78 | 0.25 | 0.005 | 6.61896825854844e-12 | 2.23019516503531e-07 |
72 | 8 | Mes | Mesangial cells | wk11 | CETP | 1071 | 1869 | 0.77 | 0.25 | 0.005 | 2.31864339862783e-12 | 7.8124370673366e-08 |
72 | 8 | Mes | Mesangial cells | wk11 | ZNF440 | 126070 | 20874 | 0.77 | 0.5 | 0.02 | 3.75148753310546e-09 | 0.000126402620940456 |
72 | 8 | Mes | Mesangial cells | wk11 | MINDY4 | 84182 | 21916 | 0.77 | 0.5 | 0.02 | 1.26664901085012e-08 | 0.00042678471771584 |
72 | 8 | Mes | Mesangial cells | wk11 | PIEZO2 | 63895 | 26270 | 0.77 | 0.25 | 0.009 | 4.07090364190257e-07 | 0.01 |
72 | 8 | Mes | Mesangial cells | wk11 | ZFP37 | 7539 | 12863 | 0.77 | 0.5 | 0.03 | 3.98489094303859e-08 | 0.00134266915434742 |
72 | 8 | Mes | Mesangial cells | wk11 | CYP26B1 | 56603 | 20581 | 0.77 | 0.25 | 0.008 | 1.5245873595256e-07 | 0.00513694464918554 |
72 | 8 | Mes | Mesangial cells | wk11 | TAF4 | 6874 | 11537 | 0.77 | 0.5 | 0.03 | 6.6943794831968e-08 | 0.00225560422306833 |
72 | 8 | Mes | Mesangial cells | wk11 | CCDC18 | 343099 | 30370 | 0.77 | 0.5 | 0.03 | 5.74044302482198e-07 | 0.01 |
72 | 8 | Mes | Mesangial cells | wk11 | LINC00305 | 221241 | 28597 | 0.77 | 0.25 | 0.005 | 4.61295885081058e-11 | 1.55429035519212e-06 |
72 | 8 | Mes | Mesangial cells | wk11 | ENSG00000245904 | NULL | 0.77 | 0.5 | 0.03 | 4.06595270315206e-08 | 0.00136998210380006 | |
72 | 8 | Mes | Mesangial cells | wk11 | ZNF93 | 81931 | 13169 | 0.77 | 0.5 | 0.03 | 4.69474091751813e-07 | 0.01 |
72 | 8 | Mes | Mesangial cells | wk11 | CYGB | 114757 | 16505 | 0.76 | 0.5 | 0.02 | 1.82095086406096e-10 | 6.135511841367e-06 |
72 | 8 | Mes | Mesangial cells | wk11 | TTC13 | 79573 | 26204 | 0.76 | 0.5 | 0.03 | 5.5657065428457e-07 | 0.01 |
72 | 8 | Mes | Mesangial cells | wk11 | KSR1 | 8844 | 6465 | 0.76 | 0.5 | 0.03 | 1.89387140869837e-07 | 0.00638121032446829 |
72 | 8 | Mes | Mesangial cells | wk11 | MELTF-AS1 | 100507057 | 40373 | 0.76 | 0.5 | 0.03 | 4.42495104033438e-07 | 0.01 |
72 | 8 | Mes | Mesangial cells | wk11 | SPATA24 | 202051 | 27322 | 0.76 | 0.5 | 0.03 | 8.38460124710012e-07 | 0.02 |
72 | 8 | Mes | Mesangial cells | wk11 | CEP112 | 201134 | 28514 | 0.75 | 0.5 | 0.03 | 4.56739409109356e-07 | 0.01 |
72 | 8 | Mes | Mesangial cells | wk11 | HIC1 | 3090 | 4909 | 0.75 | 0.5 | 0.02 | 1.30561061837862e-09 | 4.39912441756492e-05 |
72 | 8 | Mes | Mesangial cells | wk11 | INTS2 | 57508 | 29241 | 0.75 | 0.5 | 0.03 | 1.12522290328168e-06 | 0.03 |
72 | 8 | Mes | Mesangial cells | wk11 | ICAM2 | 3384 | 5345 | 0.75 | 0.25 | 0.01 | 1.15257257840113e-06 | 0.03 |
72 | 8 | Mes | Mesangial cells | wk11 | EHD2 | 30846 | 3243 | 0.73 | 0.5 | 0.03 | 1.40629290171378e-07 | 0.00473836330303442 |
72 | 8 | Mes | Mesangial cells | wk11 | ITGA9 | 3680 | 6145 | 0.73 | 0.5 | 0.02 | 7.15636570953417e-09 | 0.000241126586217044 |
72 | 8 | Mes | Mesangial cells | wk11 | FIBIN | 387758 | 33747 | 0.69 | 0.5 | 0.02 | 2.81193301603443e-08 | 0.000947452710422642 |
72 | 8 | Mes | Mesangial cells | wk11 | CCL2 | 6347 | 10618 | 0.68 | 0.5 | 0.02 | 2.49121728694013e-10 | 8.39390752661608e-06 |
72 | 8 | Mes | Mesangial cells | wk11 | SYT10 | 341359 | 19266 | 0.49 | 0.25 | 0.003 | 7.01089609249453e-17 | 2.36225132940511e-12 |
72 | 8 | Mes | Mesangial cells | wk11 | SRXN1 | 140809 | 16132 | 0.49 | 0.25 | 0.005 | 2.41801376321811e-12 | 8.14725557378711e-08 |
72 | 8 | Mes | Mesangial cells | wk11 | TNFRSF14 | 8764 | 11912 | 0.49 | 0.25 | 0.006 | 1.05977444475145e-10 | 3.57080401414552e-06 |
72 | 8 | Mes | Mesangial cells | wk11 | ARAP3 | 64411 | 24097 | 0.49 | 0.25 | 0.006 | 1.07897645993203e-10 | 3.63550328409497e-06 |
72 | 8 | Mes | Mesangial cells | wk11 | TG | 7038 | 11764 | 0.49 | 0.25 | 0.001 | 1.47942440687993e-34 | 4.98477259654123e-30 |
72 | 8 | Mes | Mesangial cells | wk11 | LACC1 | 144811 | 26789 | 0.49 | 0.25 | 0.01 | 1.01560889149568e-06 | 0.03 |
72 | 8 | Mes | Mesangial cells | wk11 | FUT2 | 2524 | 4013 | 0.48 | 0.25 | 0.005 | 8.09968311994501e-13 | 2.72910723043427e-08 |
72 | 8 | Mes | Mesangial cells | wk11 | LOXHD1 | 125336 | 26521 | 0.48 | 0.25 | 0 | 4.87955892561676e-266 | 1.64411858439731e-261 |
72 | 8 | Mes | Mesangial cells | wk11 | LYNX1 | 66004 | 29604 | 0.48 | 0.25 | 0.006 | 8.33924344632737e-10 | 2.80982468680555e-05 |
72 | 8 | Mes | Mesangial cells | wk11 | PCDHGA2 | 56113 | 8700 | 0.48 | 0.25 | 0.007 | 8.17970975985576e-09 | 0.00027560714064858 |
72 | 8 | Mes | Mesangial cells | wk11 | ENSG00000236723 | NULL | 0.47 | 0.25 | 0.002 | 7.52506510675185e-31 | 2.53549543706897e-26 | |
72 | 8 | Mes | Mesangial cells | wk11 | MEGF10 | 84466 | 29634 | 0.47 | 0.25 | 0.002 | 1.79548474690334e-25 | 6.04970630621613e-21 |
72 | 8 | Mes | Mesangial cells | wk11 | TENM1 | 10178 | 8117 | 0.47 | 0.25 | 0.003 | 4.61415962841405e-19 | 1.55469494519783e-14 |
72 | 8 | Mes | Mesangial cells | wk11 | SNAI3-AS1 | 197187 | 28327 | 0.47 | 0.25 | 0.009 | 2.20688437605317e-07 | 0.00743587621667355 |