Marker Genes
Dataset: Single-cell transcriptomics reveals gene expression dynamics of human fetal kidney development
- tissue: Kidney
- ontology: Kidney
- genotype: -
- stage: Fetal
- treatment condition: WT
- cell/nucleus: Cells
- pmid: 30789893
- subset name: wk11
- total genes: Not reported
- clustering: scran
- pseudotime: Monocle 2
- link: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE114530
Rows:100
| dataset id | cluster id | cluster name | cell type name | sample id | gene symbol | entrez geneid | species specific geneid |
avg log fc (?)
|
pct 1 | pct 2 | p value | padj |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 72 | 8 | Mes | Mesangial cells | wk11 | CDH5 | 1003 | 1764 | 1.62 | 0.25 | 0.009 | 2.0080915890908E-7 | 0.0067660638002824 |
| 72 | 8 | Mes | Mesangial cells | wk11 | LDB2 | 9079 | 6533 | 1.59 | 0.75 | 0.06 | 2.678843489105E-8 | 0.00090260952521905 |
| 72 | 8 | Mes | Mesangial cells | wk11 | EMCN | 51705 | 16041 | 1.44 | 0.75 | 0.05 | 1.9208685393362E-9 | 6.4721744564396E-5 |
| 72 | 8 | Mes | Mesangial cells | wk11 | SLC2A3 | 6515 | 11007 | 1.21 | 0.75 | 0.07 | 2.878336434086E-7 | 0.0096982667810092 |
| 72 | 8 | Mes | Mesangial cells | wk11 | COL21A1 | 81578 | 17025 | 1.2 | 0.75 | 0.05 | 3.0149255670625E-10 | 1.015849020566E-5 |
| 72 | 8 | Mes | Mesangial cells | wk11 | DNM3OS | 100628315 | 41228 | 1.2 | 0.5 | 0.02 | 8.9533042837679E-9 | 0.00030167263453728 |
| 72 | 8 | Mes | Mesangial cells | wk11 | CD34 | 947 | 1662 | 1.19 | 0.25 | 0.009 | 2.1302045375068E-7 | 0.0071775111686756 |
| 72 | 8 | Mes | Mesangial cells | wk11 | AGTR1 | 185 | 336 | 1.18 | 0.5 | 0.02 | 9.8290910371205E-10 | 3.3118139340474E-5 |
| 72 | 8 | Mes | Mesangial cells | wk11 | APLNR | 187 | 339 | 1.17 | 0.25 | 0.009 | 7.694271958784E-7 | 0.02 |
| 72 | 8 | Mes | Mesangial cells | wk11 | RAMP2 | 10266 | 9844 | 1.17 | 0.75 | 0.07 | 7.1398707117555E-8 | 0.0024057080376189 |
| 72 | 8 | Mes | Mesangial cells | wk11 | TFPI | 7035 | 11760 | 1.11 | 0.75 | 0.04 | 2.7877794858906E-11 | 9.3931441997597E-7 |
| 72 | 8 | Mes | Mesangial cells | wk11 | NFAT5 | 10725 | 7774 | 1.1 | 1 | 0.14 | 3.5603178370475E-7 | 0.01 |
| 72 | 8 | Mes | Mesangial cells | wk11 | LDLRAD4 | 753 | 1224 | 1.01 | 0.75 | 0.02 | 3.4003272942835E-22 | 1.1457062785359E-17 |
| 72 | 8 | Mes | Mesangial cells | wk11 | TTN-AS1 | 100506866 | 44124 | 0.99 | 0.75 | 0.03 | 3.7634825549436E-16 | 1.2680678120627E-11 |
| 72 | 8 | Mes | Mesangial cells | wk11 | ARHGDIB | 397 | 679 | 0.99 | 0.75 | 0.02 | 8.9157658216047E-23 | 3.0040781359315E-18 |
| 72 | 8 | Mes | Mesangial cells | wk11 | MAST2 | 23139 | 19035 | 0.99 | 0.75 | 0.03 | 1.3200112591006E-13 | 4.4476459364137E-9 |
| 72 | 8 | Mes | Mesangial cells | wk11 | RASD1 | 51655 | 15828 | 0.99 | 0.75 | 0.03 | 8.7340447386737E-16 | 2.9428490342487E-11 |
| 72 | 8 | Mes | Mesangial cells | wk11 | ABHD5 | 51099 | 21396 | 0.98 | 0.75 | 0.04 | 4.7751233660219E-12 | 1.6089300669474E-7 |
| 72 | 8 | Mes | Mesangial cells | wk11 | EIF3C | 8663 | 3279 | 0.98 | 0.75 | 0.04 | 1.1616334929414E-12 | 3.9140078911167E-8 |
| 72 | 8 | Mes | Mesangial cells | wk11 | MAP4K4 | 9448 | 6866 | 0.98 | 1 | 0.13 | 2.0798551001237E-7 | 0.0070078637743567 |
| 72 | 8 | Mes | Mesangial cells | wk11 | PXN-AS1 | 100506649 | 44123 | 0.97 | 0.75 | 0.05 | 1.3256691210313E-10 | 4.4667095364028E-6 |
| 72 | 8 | Mes | Mesangial cells | wk11 | GATA3 | 2625 | 4172 | 0.95 | 0.5 | 0.03 | 8.7286251841716E-8 | 0.0029410229695548 |
| 72 | 8 | Mes | Mesangial cells | wk11 | ITGA1 | 3672 | 6134 | 0.95 | 0.75 | 0.05 | 9.6212980252668E-11 | 3.2418001566334E-6 |
| 72 | 8 | Mes | Mesangial cells | wk11 | PIGB | 9488 | 8959 | 0.94 | 0.75 | 0.06 | 4.1467611136597E-9 | 0.00013972096896365 |
| 72 | 8 | Mes | Mesangial cells | wk11 | ENSG00000273702 | NULL | 0.93 | 0.75 | 0.06 | 3.3905819582388E-8 | 0.001142422685009 | |
| 72 | 8 | Mes | Mesangial cells | wk11 | ZNF117 | 51351 | 12897 | 0.92 | 0.75 | 0.07 | 7.1957566552356E-8 | 0.0024245382474151 |
| 72 | 8 | Mes | Mesangial cells | wk11 | ERCC5 | 2073 | 3437 | 0.92 | 0.75 | 0.07 | 8.1488161494204E-8 | 0.0027456621133857 |
| 72 | 8 | Mes | Mesangial cells | wk11 | LOC101927480 | 101927480 | NULL | 0.92 | 0.75 | 0.07 | 1.3093450239986E-7 | 0.0044117071238608 |
| 72 | 8 | Mes | Mesangial cells | wk11 | HIST1H1C | 3006 | 4716 | 0.92 | 0.75 | 0.06 | 2.0326082225531E-8 | 0.00068486701450705 |
| 72 | 8 | Mes | Mesangial cells | wk11 | DGKZ | 8525 | 2857 | 0.92 | 0.75 | 0.07 | 1.4496903325549E-7 | 0.0048845866065106 |
| 72 | 8 | Mes | Mesangial cells | wk11 | SNX29 | 92017 | 30542 | 0.91 | 0.75 | 0.07 | 2.7943097832084E-7 | 0.0094151473835425 |
| 72 | 8 | Mes | Mesangial cells | wk11 | TEX261 | 113419 | 30712 | 0.9 | 0.75 | 0.08 | 1.3513141925974E-6 | 0.04 |
| 72 | 8 | Mes | Mesangial cells | wk11 | MGLL | 11343 | 17038 | 0.87 | 0.75 | 0.08 | 8.5644562088325E-7 | 0.02 |
| 72 | 8 | Mes | Mesangial cells | wk11 | LINC02104 | 101926940 | 52959 | 0.83 | 0.5 | 0.001 | 1.0865165028928E-212 | 3.6609087048469E-208 |
| 72 | 8 | Mes | Mesangial cells | wk11 | ENSG00000270016 | NULL | 0.83 | 0.5 | 0.003 | 1.0334522377797E-67 | 3.4821139699748E-63 | |
| 72 | 8 | Mes | Mesangial cells | wk11 | ZNF469 | 84627 | 23216 | 0.82 | 0.5 | 0.004 | 5.6883590323643E-52 | 1.9166356923648E-47 |
| 72 | 8 | Mes | Mesangial cells | wk11 | ENSG00000231324 | NULL | 0.82 | 0.5 | 0.004 | 1.6351000542518E-54 | 5.5093061227961E-50 | |
| 72 | 8 | Mes | Mesangial cells | wk11 | CARD14 | 79092 | 16446 | 0.82 | 0.5 | 0.005 | 2.9629776344815E-39 | 9.9834568416218E-35 |
| 72 | 8 | Mes | Mesangial cells | wk11 | TXLNB | 167838 | 21617 | 0.81 | 0.5 | 0.007 | 9.2556212210181E-30 | 3.1185890142098E-25 |
| 72 | 8 | Mes | Mesangial cells | wk11 | LENG9 | 94059 | 16306 | 0.81 | 0.5 | 0.007 | 1.5563470674057E-30 | 5.2439558089166E-26 |
| 72 | 8 | Mes | Mesangial cells | wk11 | PRDM10 | 56980 | 13995 | 0.81 | 0.5 | 0.01 | 1.8436097772433E-18 | 6.2118587834435E-14 |
| 72 | 8 | Mes | Mesangial cells | wk11 | ENSG00000231025 | NULL | 0.81 | 0.5 | 0.01 | 1.2376517721611E-18 | 4.1701438811195E-14 | |
| 72 | 8 | Mes | Mesangial cells | wk11 | KANK4 | 163782 | 27263 | 0.8 | 0.5 | 0.008 | 1.8450797080592E-26 | 6.2168115683349E-22 |
| 72 | 8 | Mes | Mesangial cells | wk11 | LOC100132215 | 100132215 | NULL | 0.8 | 0.5 | 0.01 | 7.1815585391275E-15 | 2.4197543341736E-10 |
| 72 | 8 | Mes | Mesangial cells | wk11 | ZNF707 | 286075 | 27815 | 0.8 | 0.5 | 0.01 | 3.3248722961906E-13 | 1.1202824714785E-8 |
| 72 | 8 | Mes | Mesangial cells | wk11 | CCDC68 | 80323 | 24350 | 0.8 | 0.5 | 0.01 | 2.9031035915899E-17 | 9.7817172415029E-13 |
| 72 | 8 | Mes | Mesangial cells | wk11 | RHOJ | 57381 | 688 | 0.8 | 0.5 | 0.01 | 8.6241523376458E-22 | 2.9058218886464E-17 |
| 72 | 8 | Mes | Mesangial cells | wk11 | CSPG4 | 1464 | 2466 | 0.8 | 0.5 | 0.01 | 7.0654861244982E-18 | 2.3806448947884E-13 |
| 72 | 8 | Mes | Mesangial cells | wk11 | SALL3 | 27164 | 10527 | 0.79 | 0.25 | 0.006 | 3.7495429475278E-10 | 1.26337100074E-5 |
| 72 | 8 | Mes | Mesangial cells | wk11 | GASK1B | 51313 | 25312 | 0.79 | 0.5 | 0.01 | 2.3484148110105E-18 | 7.9127488642189E-14 |
| 72 | 8 | Mes | Mesangial cells | wk11 | DAPK2 | 23604 | 2675 | 0.79 | 0.5 | 0.01 | 3.4476795293128E-14 | 1.1616611406067E-9 |
| 72 | 8 | Mes | Mesangial cells | wk11 | CCN4 | 8840 | 12769 | 0.79 | 0.5 | 0.01 | 3.0091228153396E-17 | 1.0138938414005E-12 |
| 72 | 8 | Mes | Mesangial cells | wk11 | HLX | 3142 | 4978 | 0.79 | 0.25 | 0.004 | 2.3744526306031E-15 | 8.000480693554E-11 |
| 72 | 8 | Mes | Mesangial cells | wk11 | RNF215 | 200312 | 33434 | 0.79 | 0.5 | 0.01 | 1.210271744471E-12 | 4.0778896158206E-8 |
| 72 | 8 | Mes | Mesangial cells | wk11 | GNA14 | 9630 | 4382 | 0.79 | 0.5 | 0.01 | 1.7606725425913E-18 | 5.9324100650073E-14 |
| 72 | 8 | Mes | Mesangial cells | wk11 | CDAN1 | 146059 | 1713 | 0.79 | 0.5 | 0.02 | 9.9307986873473E-11 | 3.3460833097148E-6 |
| 72 | 8 | Mes | Mesangial cells | wk11 | CD40 | 958 | 11919 | 0.78 | 0.25 | 0.004 | 2.6399370419805E-15 | 8.8950038692493E-11 |
| 72 | 8 | Mes | Mesangial cells | wk11 | FOXP4 | 116113 | 20842 | 0.78 | 0.5 | 0.02 | 1.7039758733065E-10 | 5.741376307519E-6 |
| 72 | 8 | Mes | Mesangial cells | wk11 | CRHBP | 1393 | 2356 | 0.78 | 0.25 | 0.004 | 1.4375898569105E-14 | 4.8438152638744E-10 |
| 72 | 8 | Mes | Mesangial cells | wk11 | C22orf46 | 79640 | 26294 | 0.78 | 0.5 | 0.02 | 3.6653920382511E-10 | 1.2350171933683E-5 |
| 72 | 8 | Mes | Mesangial cells | wk11 | MCTP2 | 55784 | 25636 | 0.78 | 0.5 | 0.01 | 3.0945468636625E-13 | 1.0426766202425E-8 |
| 72 | 8 | Mes | Mesangial cells | wk11 | GIMAP7 | 168537 | 22404 | 0.78 | 0.25 | 0.005 | 6.6189682585484E-12 | 2.2301951650353E-7 |
| 72 | 8 | Mes | Mesangial cells | wk11 | CETP | 1071 | 1869 | 0.77 | 0.25 | 0.005 | 2.3186433986278E-12 | 7.8124370673366E-8 |
| 72 | 8 | Mes | Mesangial cells | wk11 | ZNF440 | 126070 | 20874 | 0.77 | 0.5 | 0.02 | 3.7514875331055E-9 | 0.00012640262094046 |
| 72 | 8 | Mes | Mesangial cells | wk11 | MINDY4 | 84182 | 21916 | 0.77 | 0.5 | 0.02 | 1.2666490108501E-8 | 0.00042678471771584 |
| 72 | 8 | Mes | Mesangial cells | wk11 | PIEZO2 | 63895 | 26270 | 0.77 | 0.25 | 0.009 | 4.0709036419026E-7 | 0.01 |
| 72 | 8 | Mes | Mesangial cells | wk11 | ZFP37 | 7539 | 12863 | 0.77 | 0.5 | 0.03 | 3.9848909430386E-8 | 0.0013426691543474 |
| 72 | 8 | Mes | Mesangial cells | wk11 | CYP26B1 | 56603 | 20581 | 0.77 | 0.25 | 0.008 | 1.5245873595256E-7 | 0.0051369446491855 |
| 72 | 8 | Mes | Mesangial cells | wk11 | TAF4 | 6874 | 11537 | 0.77 | 0.5 | 0.03 | 6.6943794831968E-8 | 0.0022556042230683 |
| 72 | 8 | Mes | Mesangial cells | wk11 | CCDC18 | 343099 | 30370 | 0.77 | 0.5 | 0.03 | 5.740443024822E-7 | 0.01 |
| 72 | 8 | Mes | Mesangial cells | wk11 | LINC00305 | 221241 | 28597 | 0.77 | 0.25 | 0.005 | 4.6129588508106E-11 | 1.5542903551921E-6 |
| 72 | 8 | Mes | Mesangial cells | wk11 | ENSG00000245904 | NULL | 0.77 | 0.5 | 0.03 | 4.0659527031521E-8 | 0.0013699821038001 | |
| 72 | 8 | Mes | Mesangial cells | wk11 | ZNF93 | 81931 | 13169 | 0.77 | 0.5 | 0.03 | 4.6947409175181E-7 | 0.01 |
| 72 | 8 | Mes | Mesangial cells | wk11 | CYGB | 114757 | 16505 | 0.76 | 0.5 | 0.02 | 1.820950864061E-10 | 6.135511841367E-6 |
| 72 | 8 | Mes | Mesangial cells | wk11 | TTC13 | 79573 | 26204 | 0.76 | 0.5 | 0.03 | 5.5657065428457E-7 | 0.01 |
| 72 | 8 | Mes | Mesangial cells | wk11 | KSR1 | 8844 | 6465 | 0.76 | 0.5 | 0.03 | 1.8938714086984E-7 | 0.0063812103244683 |
| 72 | 8 | Mes | Mesangial cells | wk11 | MELTF-AS1 | 100507057 | 40373 | 0.76 | 0.5 | 0.03 | 4.4249510403344E-7 | 0.01 |
| 72 | 8 | Mes | Mesangial cells | wk11 | SPATA24 | 202051 | 27322 | 0.76 | 0.5 | 0.03 | 8.3846012471001E-7 | 0.02 |
| 72 | 8 | Mes | Mesangial cells | wk11 | CEP112 | 201134 | 28514 | 0.75 | 0.5 | 0.03 | 4.5673940910936E-7 | 0.01 |
| 72 | 8 | Mes | Mesangial cells | wk11 | HIC1 | 3090 | 4909 | 0.75 | 0.5 | 0.02 | 1.3056106183786E-9 | 4.3991244175649E-5 |
| 72 | 8 | Mes | Mesangial cells | wk11 | INTS2 | 57508 | 29241 | 0.75 | 0.5 | 0.03 | 1.1252229032817E-6 | 0.03 |
| 72 | 8 | Mes | Mesangial cells | wk11 | ICAM2 | 3384 | 5345 | 0.75 | 0.25 | 0.01 | 1.1525725784011E-6 | 0.03 |
| 72 | 8 | Mes | Mesangial cells | wk11 | EHD2 | 30846 | 3243 | 0.73 | 0.5 | 0.03 | 1.4062929017138E-7 | 0.0047383633030344 |
| 72 | 8 | Mes | Mesangial cells | wk11 | ITGA9 | 3680 | 6145 | 0.73 | 0.5 | 0.02 | 7.1563657095342E-9 | 0.00024112658621704 |
| 72 | 8 | Mes | Mesangial cells | wk11 | FIBIN | 387758 | 33747 | 0.69 | 0.5 | 0.02 | 2.8119330160344E-8 | 0.00094745271042264 |
| 72 | 8 | Mes | Mesangial cells | wk11 | CCL2 | 6347 | 10618 | 0.68 | 0.5 | 0.02 | 2.4912172869401E-10 | 8.3939075266161E-6 |
| 72 | 8 | Mes | Mesangial cells | wk11 | SYT10 | 341359 | 19266 | 0.49 | 0.25 | 0.003 | 7.0108960924945E-17 | 2.3622513294051E-12 |
| 72 | 8 | Mes | Mesangial cells | wk11 | SRXN1 | 140809 | 16132 | 0.49 | 0.25 | 0.005 | 2.4180137632181E-12 | 8.1472555737871E-8 |
| 72 | 8 | Mes | Mesangial cells | wk11 | TNFRSF14 | 8764 | 11912 | 0.49 | 0.25 | 0.006 | 1.0597744447515E-10 | 3.5708040141455E-6 |
| 72 | 8 | Mes | Mesangial cells | wk11 | ARAP3 | 64411 | 24097 | 0.49 | 0.25 | 0.006 | 1.078976459932E-10 | 3.635503284095E-6 |
| 72 | 8 | Mes | Mesangial cells | wk11 | TG | 7038 | 11764 | 0.49 | 0.25 | 0.001 | 1.4794244068799E-34 | 4.9847725965412E-30 |
| 72 | 8 | Mes | Mesangial cells | wk11 | LACC1 | 144811 | 26789 | 0.49 | 0.25 | 0.01 | 1.0156088914957E-6 | 0.03 |
| 72 | 8 | Mes | Mesangial cells | wk11 | FUT2 | 2524 | 4013 | 0.48 | 0.25 | 0.005 | 8.099683119945E-13 | 2.7291072304343E-8 |
| 72 | 8 | Mes | Mesangial cells | wk11 | LOXHD1 | 125336 | 26521 | 0.48 | 0.25 | 0 | 4.8795589256168E-266 | 1.6441185843973E-261 |
| 72 | 8 | Mes | Mesangial cells | wk11 | LYNX1 | 66004 | 29604 | 0.48 | 0.25 | 0.006 | 8.3392434463274E-10 | 2.8098246868055E-5 |
| 72 | 8 | Mes | Mesangial cells | wk11 | PCDHGA2 | 56113 | 8700 | 0.48 | 0.25 | 0.007 | 8.1797097598558E-9 | 0.00027560714064858 |
| 72 | 8 | Mes | Mesangial cells | wk11 | ENSG00000236723 | NULL | 0.47 | 0.25 | 0.002 | 7.5250651067518E-31 | 2.535495437069E-26 | |
| 72 | 8 | Mes | Mesangial cells | wk11 | MEGF10 | 84466 | 29634 | 0.47 | 0.25 | 0.002 | 1.7954847469033E-25 | 6.0497063062161E-21 |
| 72 | 8 | Mes | Mesangial cells | wk11 | TENM1 | 10178 | 8117 | 0.47 | 0.25 | 0.003 | 4.6141596284141E-19 | 1.5546949451978E-14 |
| 72 | 8 | Mes | Mesangial cells | wk11 | SNAI3-AS1 | 197187 | 28327 | 0.47 | 0.25 | 0.009 | 2.2068843760532E-7 | 0.0074358762166735 |