Marker Genes
Dataset: Single-cell transcriptomics reveals gene expression dynamics of human fetal kidney development
- tissue: Kidney
- ontology: Kidney
- genotype: -
- stage: Fetal
- treatment condition: WT
- cell/nucleus: Cells
- pmid: 30789893
- subset name: wk11
- total genes: Not reported
- clustering: scran
- pseudotime: Monocle 2
- link: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE114530
Rows:100
dataset id | cluster id | cluster name | cell type name | sample id | gene symbol | entrez geneid | species specific geneid |
avg log fc (?)
|
pct 1 | pct 2 | p value | padj |
---|---|---|---|---|---|---|---|---|---|---|---|---|
72 | 7 | Leu | Leukocyte | wk11 | HLA-DRA | 3122 | 4947 | 3.85 | 0.44 | 0.005 | 4.81390558267599e-64 | 1.62199734702685e-59 |
72 | 7 | Leu | Leukocyte | wk11 | CD74 | 972 | 1697 | 3.71 | 0.88 | 0.19 | 1.07826978633114e-09 | 3.63312221806415e-05 |
72 | 7 | Leu | Leukocyte | wk11 | LTB | 4050 | 6711 | 3.62 | 0.44 | 0.004 | 1.34457831573543e-76 | 4.53042217703895e-72 |
72 | 7 | Leu | Leukocyte | wk11 | CCL3 | 6348 | 10627 | 3.33 | 0.44 | 0 | 0 | 0 |
72 | 7 | Leu | Leukocyte | wk11 | HLA-B | 3106 | 4932 | 3.27 | 0.66 | 0.09 | 3.28757377560071e-10 | 1.1077151079509e-05 |
72 | 7 | Leu | Leukocyte | wk11 | CCL4 | 6351 | 10630 | 3.19 | 0.44 | 0 | 0 | 0 |
72 | 7 | Leu | Leukocyte | wk11 | HLA-DPB1 | 3115 | 4940 | 2.99 | 0.44 | 0.05 | 2.48499004374501e-08 | 0.000837292545339443 |
72 | 7 | Leu | Leukocyte | wk11 | SRGN | 5552 | 9361 | 2.91 | 0.77 | 0.003 | 1.11719948785047e-289 | 3.76429195436338e-285 |
72 | 7 | Leu | Leukocyte | wk11 | B2M | 567 | 914 | 2.8 | 1 | 0.64 | 1.48086549551251e-07 | 0.00498962820057986 |
72 | 7 | Leu | Leukocyte | wk11 | HLA-DPA1 | 3113 | 4938 | 2.79 | 0.44 | 0.01 | 1.24574930953496e-21 | 4.1974277235471e-17 |
72 | 7 | Leu | Leukocyte | wk11 | LST1 | 7940 | 14189 | 2.68 | 0.77 | 0.003 | 6.987525252437e-276 | 2.35437675855612e-271 |
72 | 7 | Leu | Leukocyte | wk11 | ARHGDIB | 397 | 679 | 2.65 | 0.88 | 0.02 | 5.13106777792915e-70 | 1.72886197709545e-65 |
72 | 7 | Leu | Leukocyte | wk11 | LAPTM5 | 7805 | 29612 | 2.56 | 0.77 | 0.003 | 1.78419959629269e-289 | 6.01168211974858e-285 |
72 | 7 | Leu | Leukocyte | wk11 | CD52 | 1043 | 1804 | 2.5 | 0.77 | 0.003 | 2.49383499897081e-252 | 8.40272764553226e-248 |
72 | 7 | Leu | Leukocyte | wk11 | CORO1A | 11151 | 2252 | 2.44 | 0.77 | 0.03 | 1.06000949658374e-32 | 3.57159599778926e-28 |
72 | 7 | Leu | Leukocyte | wk11 | RAC2 | 5880 | 9802 | 2.32 | 0.77 | 0.01 | 6.21287928074025e-109 | 2.09336754485262e-104 |
72 | 7 | Leu | Leukocyte | wk11 | CD69 | 969 | 1694 | 2.28 | 0.44 | 0.008 | 4.29884836011947e-46 | 1.44845396645865e-41 |
72 | 7 | Leu | Leukocyte | wk11 | DUSP2 | 1844 | 3068 | 2.26 | 0.55 | 0.02 | 1.19766130874747e-22 | 4.03540001369373e-18 |
72 | 7 | Leu | Leukocyte | wk11 | HLA-C | 3107 | 4933 | 2.26 | 0.55 | 0.02 | 1.13503264951038e-24 | 3.82437900926028e-20 |
72 | 7 | Leu | Leukocyte | wk11 | TRBC1 | 28639 | 12156 | 2.13 | 0.44 | 0 | 0 | 0 |
72 | 7 | Leu | Leukocyte | wk11 | RGS1 | 5996 | 9991 | 2.12 | 0.44 | 0.001 | 5.97544304062315e-270 | 2.01336577810756e-265 |
72 | 7 | Leu | Leukocyte | wk11 | CD53 | 963 | 1686 | 2.11 | 1 | 0.001 | 0 | 0 |
72 | 7 | Leu | Leukocyte | wk11 | NR4A2 | 4929 | 7981 | 2.1 | 0.66 | 0.007 | 2.11499209284494e-102 | 7.12625435763174e-98 |
72 | 7 | Leu | Leukocyte | wk11 | IFNG | 3458 | 5438 | 2.09 | 0.33 | 0.001 | 2.08566906523981e-152 | 7.02745334841901e-148 |
72 | 7 | Leu | Leukocyte | wk11 | CD37 | 951 | 1666 | 2.05 | 1 | 0.004 | 0 | 0 |
72 | 7 | Leu | Leukocyte | wk11 | NFKBIA | 4792 | 7797 | 2.05 | 1 | 0.48 | 4.89760093800595e-07 | 0.01 |
72 | 7 | Leu | Leukocyte | wk11 | NKG7 | 4818 | 7830 | 2.04 | 0.33 | 0.002 | 1.88604126400006e-89 | 6.35482743492181e-85 |
72 | 7 | Leu | Leukocyte | wk11 | CD83 | 9308 | 1703 | 2.02 | 0.66 | 0.06 | 6.40211405925955e-15 | 2.15712831112691e-10 |
72 | 7 | Leu | Leukocyte | wk11 | HLA-DRB1 | 3123 | 4948 | 2 | 0.44 | 0.05 | 3.61290232417101e-07 | 0.01 |
72 | 7 | Leu | Leukocyte | wk11 | ITGB2 | 3689 | 6155 | 1.91 | 0.77 | 0.009 | 9.37442908071709e-120 | 3.15862013445682e-115 |
72 | 7 | Leu | Leukocyte | wk11 | TYROBP | 7305 | 12449 | 1.91 | 0.44 | 0.001 | 7.70531431313398e-270 | 2.59622860466736e-265 |
72 | 7 | Leu | Leukocyte | wk11 | LCP1 | 3936 | 6528 | 1.88 | 1 | 0.005 | 2.43548047676823e-291 | 8.20610791842287e-287 |
72 | 7 | Leu | Leukocyte | wk11 | FCER1G | 2207 | 3611 | 1.8 | 0.55 | 0.005 | 2.44450918904439e-99 | 8.23652926156616e-95 |
72 | 7 | Leu | Leukocyte | wk11 | C1QA | 712 | 1241 | 1.79 | 0.22 | 0 | 1.43116954285397e-236 | 4.82218265769217e-232 |
72 | 7 | Leu | Leukocyte | wk11 | GNLY | 10578 | 4414 | 1.75 | 0.33 | 0.001 | 1.41280251351905e-177 | 4.76029678905108e-173 |
72 | 7 | Leu | Leukocyte | wk11 | CD48 | 962 | 1683 | 1.74 | 0.77 | 0 | 0 | 0 |
72 | 7 | Leu | Leukocyte | wk11 | ICAM1 | 3383 | 5344 | 1.74 | 0.66 | 0.01 | 3.75203741361775e-77 | 1.26421148614437e-72 |
72 | 7 | Leu | Leukocyte | wk11 | ARPC1B | 10095 | 704 | 1.72 | 1 | 0.21 | 7.49818081033258e-12 | 2.52643704223346e-07 |
72 | 7 | Leu | Leukocyte | wk11 | C1QC | 714 | 1245 | 1.71 | 0.22 | 0 | 1.43116954285397e-236 | 4.82218265769217e-232 |
72 | 7 | Leu | Leukocyte | wk11 | IL7R | 3575 | 6024 | 1.68 | 0.22 | 0 | 1.43116954285397e-236 | 4.82218265769217e-232 |
72 | 7 | Leu | Leukocyte | wk11 | ALOX5AP | 241 | 436 | 1.6 | 0.77 | 0.002 | 0 | 0 |
72 | 7 | Leu | Leukocyte | wk11 | PPP1R18 | 170954 | 29413 | 1.59 | 0.66 | 0.08 | 6.97385776800249e-12 | 2.34977163635076e-07 |
72 | 7 | Leu | Leukocyte | wk11 | CYBA | 1535 | 2577 | 1.58 | 1 | 0.52 | 1.9088202716576e-07 | 0.00643157902332311 |
72 | 7 | Leu | Leukocyte | wk11 | IGKC | 3514 | 5716 | 1.55 | 0.22 | 0 | 3.26085206252239e-158 | 1.09871149394629e-153 |
72 | 7 | Leu | Leukocyte | wk11 | MIR142 | 406934 | 31529 | 1.54 | 0.55 | 0 | 0 | 0 |
72 | 7 | Leu | Leukocyte | wk11 | LIMD2 | 80774 | 28142 | 1.54 | 1 | 0.24 | 4.10724818345107e-11 | 1.383896202932e-06 |
72 | 7 | Leu | Leukocyte | wk11 | HLA-E | 3133 | 4962 | 1.54 | 0.77 | 0.13 | 3.20951709614342e-10 | 1.08141469037456e-05 |
72 | 7 | Leu | Leukocyte | wk11 | CXCR4 | 7852 | 2561 | 1.52 | 0.88 | 0.15 | 2.51819840237885e-11 | 8.48481769697531e-07 |
72 | 7 | Leu | Leukocyte | wk11 | RHOH | 399 | 686 | 1.52 | 0.66 | 0.002 | 4.69499935182657e-266 | 1.58193308160444e-261 |
72 | 7 | Leu | Leukocyte | wk11 | PRF1 | 5551 | 9360 | 1.5 | 0.33 | 0 | 1.22219777428204e-265 | 4.11807318066592e-261 |
72 | 7 | Leu | Leukocyte | wk11 | IL4I1 | 259307 | 19094 | 1.47 | 0.44 | 0.002 | 1.48852388698967e-135 | 5.01543238482298e-131 |
72 | 7 | Leu | Leukocyte | wk11 | CD44 | 960 | 1681 | 1.46 | 0.55 | 0.006 | 5.03862283510185e-90 | 1.69771357805922e-85 |
72 | 7 | Leu | Leukocyte | wk11 | JUNB | 3726 | 6205 | 1.46 | 1 | 0.51 | 3.61117175580979e-07 | 0.01 |
72 | 7 | Leu | Leukocyte | wk11 | GYPC | 2995 | 4704 | 1.46 | 1 | 0.32 | 9.80258765970764e-09 | 0.000330288388606189 |
72 | 7 | Leu | Leukocyte | wk11 | TMIGD2 | 126259 | 28324 | 1.45 | 0.44 | 0.001 | 5.97544304062315e-270 | 2.01336577810756e-265 |
72 | 7 | Leu | Leukocyte | wk11 | IL2RG | 3561 | 6010 | 1.45 | 0.66 | 0.001 | 0 | 0 |
72 | 7 | Leu | Leukocyte | wk11 | HLA-DMA | 3108 | 4934 | 1.44 | 0.44 | 0.01 | 1.00956330039772e-36 | 3.40162258436009e-32 |
72 | 7 | Leu | Leukocyte | wk11 | ZFP36 | 7538 | 12862 | 1.43 | 0.77 | 0.2 | 3.17147652568965e-07 | 0.01 |
72 | 7 | Leu | Leukocyte | wk11 | VPS37B | 79720 | 25754 | 1.43 | 0.66 | 0.09 | 3.35854876247282e-10 | 1.13162942002759e-05 |
72 | 7 | Leu | Leukocyte | wk11 | C1QB | 713 | 1242 | 1.41 | 0.22 | 0 | 1.43116954285397e-236 | 4.82218265769217e-232 |
72 | 7 | Leu | Leukocyte | wk11 | GPSM3 | 63940 | 13945 | 1.41 | 0.66 | 0.03 | 6.5126983953845e-23 | 2.19438859734085e-18 |
72 | 7 | Leu | Leukocyte | wk11 | GZMA | 3001 | 4708 | 1.4 | 0.33 | 0.001 | 1.13107764246384e-177 | 3.81105300851767e-173 |
72 | 7 | Leu | Leukocyte | wk11 | BHLHE40 | 8553 | 1046 | 1.39 | 0.77 | 0.04 | 9.06285093927288e-29 | 3.0536369954786e-24 |
72 | 7 | Leu | Leukocyte | wk11 | EVI2B | 2124 | 3500 | 1.37 | 0.55 | 0 | 0 | 0 |
72 | 7 | Leu | Leukocyte | wk11 | BIN2 | 51411 | 1053 | 1.37 | 0.55 | 0.001 | 0 | 0 |
72 | 7 | Leu | Leukocyte | wk11 | CTSS | 1520 | 2545 | 1.37 | 0.66 | 0.001 | 0 | 0 |
72 | 7 | Leu | Leukocyte | wk11 | IL32 | 9235 | 16830 | 1.36 | 0.44 | 0.01 | 8.25674507809805e-22 | 2.78202768661436e-17 |
72 | 7 | Leu | Leukocyte | wk11 | RORA | 6095 | 10258 | 1.36 | 0.44 | 0.05 | 2.20229732359094e-07 | 0.00742042060210731 |
72 | 7 | Leu | Leukocyte | wk11 | MYO1F | 4542 | 7600 | 1.36 | 0.55 | 0.01 | 4.22699513935926e-52 | 1.42424374225571e-47 |
72 | 7 | Leu | Leukocyte | wk11 | PSMB9 | 5698 | 9546 | 1.34 | 0.55 | 0.001 | 5.50462832119088e-246 | 1.85472946654206e-241 |
72 | 7 | Leu | Leukocyte | wk11 | GPR183 | 1880 | 3128 | 1.34 | 0.44 | 0.001 | 2.39444148251589e-189 | 8.06783113118905e-185 |
72 | 7 | Leu | Leukocyte | wk11 | NFKBID | 84807 | 15671 | 1.32 | 0.66 | 0.02 | 6.13925247887018e-32 | 2.06855973023052e-27 |
72 | 7 | Leu | Leukocyte | wk11 | COTL1 | 23406 | 18304 | 1.28 | 1 | 0.47 | 2.11237759087225e-07 | 0.00711744505468496 |
72 | 7 | Leu | Leukocyte | wk11 | TNFAIP8 | 25816 | 17260 | 1.28 | 0.66 | 0.08 | 7.66341889316518e-11 | 2.58211236186308e-06 |
72 | 7 | Leu | Leukocyte | wk11 | TNFAIP3 | 7128 | 11896 | 1.27 | 0.44 | 0.02 | 3.92679800964985e-14 | 1.32309532137142e-09 |
72 | 7 | Leu | Leukocyte | wk11 | CCL4L2 | 9560 | 24066 | 1.27 | 0.33 | 0 | 8.75503055545906e-266 | 2.94991999535638e-261 |
72 | 7 | Leu | Leukocyte | wk11 | PTPN6 | 5777 | 9658 | 1.26 | 0.66 | 0.04 | 4.20309503319535e-19 | 1.41619084048484e-14 |
72 | 7 | Leu | Leukocyte | wk11 | MAP3K8 | 1326 | 6860 | 1.26 | 0.77 | 0.06 | 1.3143745941181e-19 | 4.42865375742153e-15 |
72 | 7 | Leu | Leukocyte | wk11 | ARHGAP45 | 23526 | 17102 | 1.24 | 0.55 | 0.01 | 2.30577779131469e-47 | 7.76908769005572e-43 |
72 | 7 | Leu | Leukocyte | wk11 | SPIB | 6689 | 11242 | 1.24 | 0.33 | 0.007 | 2.73894675683285e-28 | 9.2286072024726e-24 |
72 | 7 | Leu | Leukocyte | wk11 | PYCARD | 29108 | 16608 | 1.24 | 0.77 | 0.04 | 7.25021649134672e-28 | 2.44288794459436e-23 |
72 | 7 | Leu | Leukocyte | wk11 | ICAM3 | 3385 | 5346 | 1.22 | 0.66 | 0.03 | 3.36972631796941e-26 | 1.13539558557661e-21 |
72 | 7 | Leu | Leukocyte | wk11 | GTF3A | 2971 | 4662 | 1.22 | 0.88 | 0.29 | 5.84710132852404e-07 | 0.01 |
72 | 7 | Leu | Leukocyte | wk11 | ABRACL | 58527 | 21230 | 1.22 | 1 | 0.33 | 2.53144659729196e-08 | 0.000852945616491552 |
72 | 7 | Leu | Leukocyte | wk11 | RNASE6 | 6039 | 10048 | 1.22 | 0.22 | 0.001 | 8.5771107377127e-80 | 2.88997169196492e-75 |
72 | 7 | Leu | Leukocyte | wk11 | PRR13 | 54458 | 24528 | 1.22 | 1 | 0.29 | 3.58764467787609e-09 | 0.000120882099776357 |
72 | 7 | Leu | Leukocyte | wk11 | CD79A | 973 | 1698 | 1.21 | 0.22 | 0.001 | 3.65697847747967e-60 | 1.232182328202e-55 |
72 | 7 | Leu | Leukocyte | wk11 | CD79B | 974 | 1699 | 1.19 | 0.22 | 0.006 | 7.8955463889293e-17 | 2.66032540028584e-12 |
72 | 7 | Leu | Leukocyte | wk11 | GPR65 | 8477 | 4517 | 1.19 | 0.55 | 0.002 | 6.52544466231566e-197 | 2.19868332452064e-192 |
72 | 7 | Leu | Leukocyte | wk11 | IRF8 | 3394 | 5358 | 1.18 | 0.55 | 0.01 | 5.23649705382857e-47 | 1.764385317317e-42 |
72 | 7 | Leu | Leukocyte | wk11 | ARID5A | 10865 | 17361 | 1.14 | 0.55 | 0.05 | 8.88495140597676e-13 | 2.99369552672981e-08 |
72 | 7 | Leu | Leukocyte | wk11 | HOPX | 84525 | 24961 | 1.13 | 0.66 | 0.02 | 3.92921428108191e-37 | 1.32390945986774e-32 |
72 | 7 | Leu | Leukocyte | wk11 | REL | 5966 | 9954 | 1.13 | 0.77 | 0.16 | 3.92527924557628e-08 | 0.00132258358900447 |
72 | 7 | Leu | Leukocyte | wk11 | NEURL1 | 9148 | 7761 | 1.12 | 0.66 | 0.007 | 1.26517883384476e-104 | 4.26289356275652e-100 |
72 | 7 | Leu | Leukocyte | wk11 | HIVEP3 | 59269 | 13561 | 1.12 | 0.44 | 0.01 | 4.13741391050806e-26 | 1.39406024300658e-21 |
72 | 7 | Leu | Leukocyte | wk11 | GMFG | 9535 | 4374 | 1.12 | 0.66 | 0.01 | 5.32717387919455e-71 | 1.79493796685581e-66 |
72 | 7 | Leu | Leukocyte | wk11 | ZC3HAV1 | 56829 | 23721 | 1.12 | 0.55 | 0.09 | 9.31365345876279e-07 | 0.03 |
72 | 7 | Leu | Leukocyte | wk11 | FAM110A | 83541 | 16188 | 1.12 | 0.55 | 0.02 | 7.68405761659914e-22 | 2.58906637333692e-17 |
72 | 7 | Leu | Leukocyte | wk11 | RIPOR2 | 9750 | 13872 | 1.12 | 0.33 | 0.03 | 1.20656119444147e-06 | 0.04 |
72 | 7 | Leu | Leukocyte | wk11 | GZMH | 2999 | 4710 | 1.11 | 0.33 | 0.001 | 1.57894150164158e-177 | 5.32008549563115e-173 |