Marker Genes
Dataset: Single-cell transcriptomics reveals gene expression dynamics of human fetal kidney development
- tissue: Kidney
- ontology: Kidney
- genotype: -
- stage: Fetal
- treatment condition: WT
- cell/nucleus: Cells
- pmid: 30789893
- subset name: wk11
- total genes: Not reported
- clustering: scran
- pseudotime: Monocle 2
- link: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE114530
Rows:100
dataset id | cluster id | cluster name | cell type name | sample id | gene symbol | entrez geneid | species specific geneid |
avg log fc (?)
|
pct 1 | pct 2 | p value | padj |
---|---|---|---|---|---|---|---|---|---|---|---|---|
72 | 6 | IPC | Interstitial progenitor cell | wk11 | LGALS1 | 3956 | 6561 | 2.13 | 0.93 | 0.15 | 3.63538044994476e-88 | 1.22490508880439e-83 |
72 | 6 | IPC | Interstitial progenitor cell | wk11 | UBE2C | 11065 | 15937 | 1.79 | 0.8 | 0.12 | 1.59673962255671e-77 | 5.38005448424258e-73 |
72 | 6 | IPC | Interstitial progenitor cell | wk11 | PTN | 5764 | 9630 | 1.74 | 0.85 | 0.36 | 1.19280613048028e-34 | 4.01904097604025e-30 |
72 | 6 | IPC | Interstitial progenitor cell | wk11 | CENPF | 1063 | 1857 | 1.69 | 0.7 | 0.12 | 7.72383476907623e-60 | 2.60246888709254e-55 |
72 | 6 | IPC | Interstitial progenitor cell | wk11 | HMGB2 | 3148 | 5000 | 1.67 | 0.96 | 0.48 | 7.37174985919986e-41 | 2.4838373975588e-36 |
72 | 6 | IPC | Interstitial progenitor cell | wk11 | COL1A1 | 1277 | 2197 | 1.67 | 0.93 | 0.25 | 3.12840012528407e-56 | 1.05408313821321e-51 |
72 | 6 | IPC | Interstitial progenitor cell | wk11 | COL1A2 | 1278 | 2198 | 1.58 | 0.92 | 0.23 | 3.86467385318833e-57 | 1.30216320809328e-52 |
72 | 6 | IPC | Interstitial progenitor cell | wk11 | PTTG1 | 9232 | 9690 | 1.57 | 0.74 | 0.22 | 1.30048581442043e-36 | 4.3818569031082e-32 |
72 | 6 | IPC | Interstitial progenitor cell | wk11 | SULT1E1 | 6783 | 11377 | 1.55 | 0.83 | 0.12 | 4.745264086216e-75 | 1.59886928120962e-70 |
72 | 6 | IPC | Interstitial progenitor cell | wk11 | TNC | 3371 | 5318 | 1.54 | 0.87 | 0.07 | 9.89701769308159e-132 | 3.33470114150691e-127 |
72 | 6 | IPC | Interstitial progenitor cell | wk11 | CLDN11 | 5010 | 8514 | 1.54 | 0.75 | 0.09 | 4.71551287465109e-81 | 1.58884490798494e-76 |
72 | 6 | IPC | Interstitial progenitor cell | wk11 | TOP2A | 7153 | 11989 | 1.53 | 0.74 | 0.13 | 1.11470510999474e-59 | 3.75588739761628e-55 |
72 | 6 | IPC | Interstitial progenitor cell | wk11 | PCLAF | 9768 | 28961 | 1.51 | 0.93 | 0.3 | 6.15555199474496e-49 | 2.07405168910937e-44 |
72 | 6 | IPC | Interstitial progenitor cell | wk11 | MFAP4 | 4239 | 7035 | 1.43 | 0.93 | 0.14 | 7.57747107032848e-84 | 2.55315310243648e-79 |
72 | 6 | IPC | Interstitial progenitor cell | wk11 | MKI67 | 4288 | 7107 | 1.43 | 0.6 | 0.09 | 5.88750143988182e-54 | 1.98373473515378e-49 |
72 | 6 | IPC | Interstitial progenitor cell | wk11 | CDK1 | 983 | 1722 | 1.4 | 0.7 | 0.12 | 1.16446579687065e-55 | 3.92355105597596e-51 |
72 | 6 | IPC | Interstitial progenitor cell | wk11 | EMILIN1 | 11117 | 19880 | 1.4 | 0.87 | 0.14 | 6.59363120758773e-75 | 2.22165809908461e-70 |
72 | 6 | IPC | Interstitial progenitor cell | wk11 | PCOLCE | 5118 | 8738 | 1.36 | 0.82 | 0.09 | 9.94564595177988e-94 | 3.35108594699271e-89 |
72 | 6 | IPC | Interstitial progenitor cell | wk11 | ARL6IP1 | 23204 | 697 | 1.34 | 0.91 | 0.67 | 4.08829397790303e-21 | 1.37750977291465e-16 |
72 | 6 | IPC | Interstitial progenitor cell | wk11 | B2M | 567 | 914 | 1.33 | 1 | 0.63 | 8.82159504711926e-42 | 2.97234823517636e-37 |
72 | 6 | IPC | Interstitial progenitor cell | wk11 | TPM2 | 7169 | 12011 | 1.33 | 0.87 | 0.22 | 7.07496098890748e-52 | 2.38383735560249e-47 |
72 | 6 | IPC | Interstitial progenitor cell | wk11 | NUSAP1 | 51203 | 18538 | 1.31 | 0.71 | 0.14 | 1.03766934809795e-49 | 3.49632310148124e-45 |
72 | 6 | IPC | Interstitial progenitor cell | wk11 | COL3A1 | 1281 | 2201 | 1.31 | 0.96 | 0.43 | 1.73019917613622e-34 | 5.82973310407339e-30 |
72 | 6 | IPC | Interstitial progenitor cell | wk11 | CCNB1 | 891 | 1579 | 1.3 | 0.53 | 0.13 | 7.31528053810062e-30 | 2.46481062450762e-25 |
72 | 6 | IPC | Interstitial progenitor cell | wk11 | SMC4 | 10051 | 14013 | 1.25 | 0.79 | 0.28 | 4.04485678973305e-34 | 1.36287404673265e-29 |
72 | 6 | IPC | Interstitial progenitor cell | wk11 | HIST1H4C | 8364 | 4787 | 1.23 | 0.47 | 0.15 | 2.84971659846492e-18 | 9.60183510686772e-14 |
72 | 6 | IPC | Interstitial progenitor cell | wk11 | PIMREG | 54478 | 25483 | 1.21 | 0.55 | 0.09 | 1.59891118371329e-42 | 5.38737134240357e-38 |
72 | 6 | IPC | Interstitial progenitor cell | wk11 | IGFBP5 | 3488 | 5474 | 1.2 | 0.67 | 0.11 | 2.69934736548787e-48 | 9.09518101327482e-44 |
72 | 6 | IPC | Interstitial progenitor cell | wk11 | DCN | 1634 | 2705 | 1.2 | 0.62 | 0.11 | 6.06156935481483e-43 | 2.04238517841131e-38 |
72 | 6 | IPC | Interstitial progenitor cell | wk11 | PRC1 | 9055 | 9341 | 1.2 | 0.61 | 0.1 | 2.100525701445e-52 | 7.07751129844879e-48 |
72 | 6 | IPC | Interstitial progenitor cell | wk11 | TUBB6 | 84617 | 20776 | 1.16 | 0.76 | 0.22 | 8.11588161859618e-39 | 2.7345651525698e-34 |
72 | 6 | IPC | Interstitial progenitor cell | wk11 | TUBA1C | 84790 | 20768 | 1.15 | 0.64 | 0.22 | 4.86701542691045e-24 | 1.63989217794321e-19 |
72 | 6 | IPC | Interstitial progenitor cell | wk11 | MEG3 | 55384 | 14575 | 1.14 | 0.75 | 0.17 | 5.29435607918435e-42 | 1.78388033732037e-37 |
72 | 6 | IPC | Interstitial progenitor cell | wk11 | CKS2 | 1164 | 2000 | 1.12 | 0.67 | 0.33 | 6.16230369775359e-17 | 2.0763266079211e-12 |
72 | 6 | IPC | Interstitial progenitor cell | wk11 | AKAP12 | 9590 | 370 | 1.12 | 0.83 | 0.34 | 7.38839289155595e-28 | 2.48944510088086e-23 |
72 | 6 | IPC | Interstitial progenitor cell | wk11 | TGFBI | 7045 | 11771 | 1.11 | 0.71 | 0.07 | 1.33182885485076e-83 | 4.48746414353416e-79 |
72 | 6 | IPC | Interstitial progenitor cell | wk11 | CALD1 | 800 | 1441 | 1.11 | 0.89 | 0.53 | 2.65934602425349e-25 | 8.96040049411973e-21 |
72 | 6 | IPC | Interstitial progenitor cell | wk11 | BIRC5 | 332 | 593 | 1.1 | 0.73 | 0.13 | 2.64732321639026e-55 | 8.91989084530534e-51 |
72 | 6 | IPC | Interstitial progenitor cell | wk11 | OLFML3 | 56944 | 24956 | 1.09 | 0.65 | 0.09 | 2.08300871650223e-60 | 7.01848956938263e-56 |
72 | 6 | IPC | Interstitial progenitor cell | wk11 | MXD3 | 83463 | 14008 | 1.09 | 0.59 | 0.06 | 1.89824228678325e-80 | 6.39593756108749e-76 |
72 | 6 | IPC | Interstitial progenitor cell | wk11 | KIF20B | 9585 | 7212 | 1.06 | 0.57 | 0.13 | 3.08298916855133e-32 | 1.03878237045168e-27 |
72 | 6 | IPC | Interstitial progenitor cell | wk11 | MOXD1 | 26002 | 21063 | 1.06 | 0.53 | 0.08 | 2.55146409683649e-45 | 8.59690312788086e-41 |
72 | 6 | IPC | Interstitial progenitor cell | wk11 | MARCKS | 4082 | 6759 | 1.06 | 0.96 | 0.66 | 2.65872762207541e-28 | 8.95831684982088e-24 |
72 | 6 | IPC | Interstitial progenitor cell | wk11 | H2AFX | 3014 | 4739 | 1.05 | 0.7 | 0.23 | 3.74337161208279e-26 | 1.26129163097517e-21 |
72 | 6 | IPC | Interstitial progenitor cell | wk11 | ASPM | 259266 | 19048 | 1.02 | 0.47 | 0.05 | 7.33809197671552e-59 | 2.47249671063453e-54 |
72 | 6 | IPC | Interstitial progenitor cell | wk11 | AURKB | 9212 | 11390 | 1.02 | 0.52 | 0.09 | 6.70102442323356e-41 | 2.25784316916431e-36 |
72 | 6 | IPC | Interstitial progenitor cell | wk11 | KPNA2 | 3838 | 6395 | 1.02 | 0.75 | 0.39 | 4.59632456760281e-18 | 1.54868559980809e-13 |
72 | 6 | IPC | Interstitial progenitor cell | wk11 | UBE2S | 27338 | 17895 | 1.01 | 0.55 | 0.25 | 1.10899688378694e-13 | 3.73665410023172e-09 |
72 | 6 | IPC | Interstitial progenitor cell | wk11 | TYMS | 7298 | 12441 | 1.01 | 0.76 | 0.25 | 3.11168676758149e-29 | 1.04845173946891e-24 |
72 | 6 | IPC | Interstitial progenitor cell | wk11 | CDC20 | 991 | 1723 | 1.01 | 0.48 | 0.08 | 3.57260467240799e-35 | 1.20375341832115e-30 |
72 | 6 | IPC | Interstitial progenitor cell | wk11 | FBLN5 | 10516 | 3602 | 1.01 | 0.59 | 0.06 | 5.62954582298393e-67 | 1.8968191695962e-62 |
72 | 6 | IPC | Interstitial progenitor cell | wk11 | COL6A3 | 1293 | 2213 | 1 | 0.64 | 0.11 | 6.27736352480523e-45 | 2.11509486604787e-40 |
72 | 6 | IPC | Interstitial progenitor cell | wk11 | SERPINH1 | 871 | 1546 | 1 | 0.97 | 0.67 | 1.53238464837326e-33 | 5.16321683422886e-29 |
72 | 6 | IPC | Interstitial progenitor cell | wk11 | CTSC | 1075 | 2528 | 0.99 | 0.79 | 0.26 | 1.31462985117795e-32 | 4.42951382055898e-28 |
72 | 6 | IPC | Interstitial progenitor cell | wk11 | RRM2 | 6241 | 10452 | 0.98 | 0.52 | 0.11 | 5.62016756772768e-30 | 1.89365926027016e-25 |
72 | 6 | IPC | Interstitial progenitor cell | wk11 | COL5A2 | 1290 | 2210 | 0.97 | 0.64 | 0.08 | 4.77669379933816e-67 | 1.609459208749e-62 |
72 | 6 | IPC | Interstitial progenitor cell | wk11 | HMGN2 | 3151 | 4986 | 0.97 | 1 | 0.92 | 2.09551972666501e-33 | 7.06064416702508e-29 |
72 | 6 | IPC | Interstitial progenitor cell | wk11 | TMSB15A | 11013 | 30744 | 0.97 | 0.88 | 0.31 | 4.2723208117719e-33 | 1.43951577431842e-28 |
72 | 6 | IPC | Interstitial progenitor cell | wk11 | TUBA1B | 10376 | 18809 | 0.96 | 1 | 0.88 | 7.25840022746149e-29 | 2.44564537264088e-24 |
72 | 6 | IPC | Interstitial progenitor cell | wk11 | FLRT2 | 23768 | 3761 | 0.95 | 0.56 | 0.1 | 1.77005513725645e-38 | 5.96402377947187e-34 |
72 | 6 | IPC | Interstitial progenitor cell | wk11 | CKS1B | 1163 | 19083 | 0.94 | 0.82 | 0.37 | 3.83005438113628e-24 | 1.29049852318006e-19 |
72 | 6 | IPC | Interstitial progenitor cell | wk11 | TM4SF1 | 4071 | 11853 | 0.94 | 0.38 | 0.02 | 5.80365267564584e-78 | 1.95548273253211e-73 |
72 | 6 | IPC | Interstitial progenitor cell | wk11 | SGO2 | 151246 | 30812 | 0.94 | 0.51 | 0.08 | 2.10869330640745e-42 | 7.10503122660927e-38 |
72 | 6 | IPC | Interstitial progenitor cell | wk11 | PCDH18 | 54510 | 14268 | 0.93 | 0.59 | 0.11 | 5.67907319158255e-37 | 1.91350692117182e-32 |
72 | 6 | IPC | Interstitial progenitor cell | wk11 | RARRES2 | 5919 | 9868 | 0.93 | 0.59 | 0.12 | 3.04073905207853e-37 | 1.02454661620734e-32 |
72 | 6 | IPC | Interstitial progenitor cell | wk11 | TPX2 | 22974 | 1249 | 0.93 | 0.48 | 0.09 | 1.21654518325019e-33 | 4.09902734044319e-29 |
72 | 6 | IPC | Interstitial progenitor cell | wk11 | FBLN1 | 2192 | 3600 | 0.93 | 0.78 | 0.38 | 1.27858970743966e-19 | 4.30808016024718e-15 |
72 | 6 | IPC | Interstitial progenitor cell | wk11 | ZEB2 | 9839 | 14881 | 0.92 | 0.64 | 0.19 | 3.30656258834151e-27 | 1.11411319851579e-22 |
72 | 6 | IPC | Interstitial progenitor cell | wk11 | NUF2 | 83540 | 14621 | 0.92 | 0.41 | 0.08 | 5.50525274621813e-27 | 1.85493986031074e-22 |
72 | 6 | IPC | Interstitial progenitor cell | wk11 | IGF2 | 3481 | 5466 | 0.91 | 0.91 | 0.54 | 2.73612346800755e-18 | 9.21909441310463e-14 |
72 | 6 | IPC | Interstitial progenitor cell | wk11 | MAD2L1 | 4085 | 6763 | 0.91 | 0.78 | 0.21 | 1.40715579220325e-35 | 4.74127072624963e-31 |
72 | 6 | IPC | Interstitial progenitor cell | wk11 | CCL2 | 6347 | 10618 | 0.91 | 0.28 | 0.01 | 2.35914392424483e-54 | 7.94889953835053e-50 |
72 | 6 | IPC | Interstitial progenitor cell | wk11 | ZWINT | 11130 | 13195 | 0.9 | 0.65 | 0.21 | 2.11950831656174e-26 | 7.14147132182311e-22 |
72 | 6 | IPC | Interstitial progenitor cell | wk11 | CENPA | 1058 | 1851 | 0.9 | 0.39 | 0.05 | 1.63842654825424e-40 | 5.52051441168782e-36 |
72 | 6 | IPC | Interstitial progenitor cell | wk11 | CENPE | 1062 | 1856 | 0.9 | 0.44 | 0.05 | 5.41994540092915e-49 | 1.82619640338907e-44 |
72 | 6 | IPC | Interstitial progenitor cell | wk11 | ALX1 | 8092 | 1494 | 0.89 | 0.39 | 0.04 | 1.52665661086603e-40 | 5.14391678465202e-36 |
72 | 6 | IPC | Interstitial progenitor cell | wk11 | CCNB2 | 9133 | 1580 | 0.89 | 0.55 | 0.14 | 2.11115132071462e-27 | 7.11331326001586e-23 |
72 | 6 | IPC | Interstitial progenitor cell | wk11 | EMCN | 51705 | 16041 | 0.88 | 0.46 | 0.05 | 1.12256328163843e-49 | 3.78236472115254e-45 |
72 | 6 | IPC | Interstitial progenitor cell | wk11 | FBN2 | 2201 | 3604 | 0.88 | 0.52 | 0.08 | 7.93014744825739e-42 | 2.67198388121584e-37 |
72 | 6 | IPC | Interstitial progenitor cell | wk11 | PLK2 | 10769 | 19699 | 0.88 | 0.66 | 0.28 | 7.33716685638603e-18 | 2.47218500059071e-13 |
72 | 6 | IPC | Interstitial progenitor cell | wk11 | CDKN3 | 1033 | 1791 | 0.87 | 0.46 | 0.07 | 1.34527397304141e-36 | 4.53276612476574e-32 |
72 | 6 | IPC | Interstitial progenitor cell | wk11 | PDGFRA | 5156 | 8803 | 0.86 | 0.53 | 0.05 | 1.85880344683214e-63 | 6.26305233375621e-59 |
72 | 6 | IPC | Interstitial progenitor cell | wk11 | H2AFZ | 3015 | 4741 | 0.86 | 0.97 | 0.85 | 5.5551734400261e-26 | 1.8717601388824e-21 |
72 | 6 | IPC | Interstitial progenitor cell | wk11 | HSPB1 | 3315 | 5246 | 0.86 | 0.76 | 0.5 | 1.71621883217131e-15 | 5.78262773311802e-11 |
72 | 6 | IPC | Interstitial progenitor cell | wk11 | NFIB | 4781 | 7785 | 0.85 | 0.46 | 0.06 | 3.13656344723947e-41 | 1.05683368791287e-36 |
72 | 6 | IPC | Interstitial progenitor cell | wk11 | ALDH1A2 | 8854 | 15472 | 0.85 | 0.61 | 0.3 | 3.54277792611287e-15 | 1.19370359442447e-10 |
72 | 6 | IPC | Interstitial progenitor cell | wk11 | MDFI | 4188 | 6967 | 0.84 | 0.65 | 0.13 | 6.3296710866699e-39 | 2.13271937594256e-34 |
72 | 6 | IPC | Interstitial progenitor cell | wk11 | SMC2 | 10592 | 14011 | 0.84 | 0.69 | 0.24 | 3.77129556193841e-24 | 1.27070032663953e-19 |
72 | 6 | IPC | Interstitial progenitor cell | wk11 | CPED1 | 79974 | 26159 | 0.84 | 0.46 | 0.05 | 9.39761919459452e-54 | 3.16643381142668e-49 |
72 | 6 | IPC | Interstitial progenitor cell | wk11 | GUCY1A1 | 2982 | 4685 | 0.84 | 0.56 | 0.08 | 2.11655667500869e-46 | 7.13152606077429e-42 |
72 | 6 | IPC | Interstitial progenitor cell | wk11 | COL9A3 | 1299 | 2219 | 0.83 | 0.48 | 0.04 | 1.84441662081307e-68 | 6.21457736216756e-64 |
72 | 6 | IPC | Interstitial progenitor cell | wk11 | FN1 | 2335 | 3778 | 0.83 | 0.56 | 0.1 | 7.21665660484131e-39 | 2.43158027643523e-34 |
72 | 6 | IPC | Interstitial progenitor cell | wk11 | PIF1 | 80119 | 26220 | 0.83 | 0.29 | 0.03 | 1.719412123472e-33 | 5.79338720882657e-29 |
72 | 6 | IPC | Interstitial progenitor cell | wk11 | IRF1 | 3659 | 6116 | 0.82 | 0.5 | 0.29 | 2.57023091989986e-07 | 0.00866013606151057 |
72 | 6 | IPC | Interstitial progenitor cell | wk11 | LMNB1 | 4001 | 6637 | 0.8 | 0.75 | 0.28 | 3.03804607822715e-22 | 1.02363924559786e-17 |
72 | 6 | IPC | Interstitial progenitor cell | wk11 | CDH11 | 1009 | 1750 | 0.8 | 0.6 | 0.24 | 2.08580782358888e-15 | 7.02792088080038e-11 |
72 | 6 | IPC | Interstitial progenitor cell | wk11 | NUCKS1 | 64710 | 29923 | 0.8 | 0.96 | 0.82 | 2.08858735648249e-22 | 7.0372862389321e-18 |
72 | 6 | IPC | Interstitial progenitor cell | wk11 | CENPK | 64105 | 29479 | 0.79 | 0.53 | 0.11 | 2.2107565351001e-33 | 7.44892306936626e-29 |
72 | 6 | IPC | Interstitial progenitor cell | wk11 | CKAP5 | 9793 | 28959 | 0.79 | 0.46 | 0.12 | 7.73273125186571e-22 | 2.60546646800363e-17 |
72 | 6 | IPC | Interstitial progenitor cell | wk11 | BASP1 | 10409 | 957 | 0.79 | 0.7 | 0.34 | 1.61710895504372e-16 | 5.44868691312431e-12 |