Marker Genes
Dataset: Single-cell transcriptomics reveals gene expression dynamics of human fetal kidney development
- tissue: Kidney
- ontology: Kidney
- genotype: -
- stage: Fetal
- treatment condition: WT
- cell/nucleus: Cells
- pmid: 30789893
- subset name: wk11
- total genes: Not reported
- clustering: scran
- pseudotime: Monocle 2
- link: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE114530
Rows:100
| dataset id | cluster id | cluster name | cell type name | sample id | gene symbol | entrez geneid | species specific geneid |
avg log fc (?)
|
pct 1 | pct 2 | p value | padj |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 72 | 6 | IPC | Interstitial progenitor cell | wk11 | LGALS1 | 3956 | 6561 | 2.13 | 0.93 | 0.15 | 3.6353804499448E-88 | 1.2249050888044E-83 |
| 72 | 6 | IPC | Interstitial progenitor cell | wk11 | UBE2C | 11065 | 15937 | 1.79 | 0.8 | 0.12 | 1.5967396225567E-77 | 5.3800544842426E-73 |
| 72 | 6 | IPC | Interstitial progenitor cell | wk11 | PTN | 5764 | 9630 | 1.74 | 0.85 | 0.36 | 1.1928061304803E-34 | 4.0190409760403E-30 |
| 72 | 6 | IPC | Interstitial progenitor cell | wk11 | CENPF | 1063 | 1857 | 1.69 | 0.7 | 0.12 | 7.7238347690762E-60 | 2.6024688870925E-55 |
| 72 | 6 | IPC | Interstitial progenitor cell | wk11 | HMGB2 | 3148 | 5000 | 1.67 | 0.96 | 0.48 | 7.3717498591999E-41 | 2.4838373975588E-36 |
| 72 | 6 | IPC | Interstitial progenitor cell | wk11 | COL1A1 | 1277 | 2197 | 1.67 | 0.93 | 0.25 | 3.1284001252841E-56 | 1.0540831382132E-51 |
| 72 | 6 | IPC | Interstitial progenitor cell | wk11 | COL1A2 | 1278 | 2198 | 1.58 | 0.92 | 0.23 | 3.8646738531883E-57 | 1.3021632080933E-52 |
| 72 | 6 | IPC | Interstitial progenitor cell | wk11 | PTTG1 | 9232 | 9690 | 1.57 | 0.74 | 0.22 | 1.3004858144204E-36 | 4.3818569031082E-32 |
| 72 | 6 | IPC | Interstitial progenitor cell | wk11 | SULT1E1 | 6783 | 11377 | 1.55 | 0.83 | 0.12 | 4.745264086216E-75 | 1.5988692812096E-70 |
| 72 | 6 | IPC | Interstitial progenitor cell | wk11 | TNC | 3371 | 5318 | 1.54 | 0.87 | 0.07 | 9.8970176930816E-132 | 3.3347011415069E-127 |
| 72 | 6 | IPC | Interstitial progenitor cell | wk11 | CLDN11 | 5010 | 8514 | 1.54 | 0.75 | 0.09 | 4.7155128746511E-81 | 1.5888449079849E-76 |
| 72 | 6 | IPC | Interstitial progenitor cell | wk11 | TOP2A | 7153 | 11989 | 1.53 | 0.74 | 0.13 | 1.1147051099947E-59 | 3.7558873976163E-55 |
| 72 | 6 | IPC | Interstitial progenitor cell | wk11 | PCLAF | 9768 | 28961 | 1.51 | 0.93 | 0.3 | 6.155551994745E-49 | 2.0740516891094E-44 |
| 72 | 6 | IPC | Interstitial progenitor cell | wk11 | MFAP4 | 4239 | 7035 | 1.43 | 0.93 | 0.14 | 7.5774710703285E-84 | 2.5531531024365E-79 |
| 72 | 6 | IPC | Interstitial progenitor cell | wk11 | MKI67 | 4288 | 7107 | 1.43 | 0.6 | 0.09 | 5.8875014398818E-54 | 1.9837347351538E-49 |
| 72 | 6 | IPC | Interstitial progenitor cell | wk11 | CDK1 | 983 | 1722 | 1.4 | 0.7 | 0.12 | 1.1644657968706E-55 | 3.923551055976E-51 |
| 72 | 6 | IPC | Interstitial progenitor cell | wk11 | EMILIN1 | 11117 | 19880 | 1.4 | 0.87 | 0.14 | 6.5936312075877E-75 | 2.2216580990846E-70 |
| 72 | 6 | IPC | Interstitial progenitor cell | wk11 | PCOLCE | 5118 | 8738 | 1.36 | 0.82 | 0.09 | 9.9456459517799E-94 | 3.3510859469927E-89 |
| 72 | 6 | IPC | Interstitial progenitor cell | wk11 | ARL6IP1 | 23204 | 697 | 1.34 | 0.91 | 0.67 | 4.088293977903E-21 | 1.3775097729147E-16 |
| 72 | 6 | IPC | Interstitial progenitor cell | wk11 | B2M | 567 | 914 | 1.33 | 1 | 0.63 | 8.8215950471193E-42 | 2.9723482351764E-37 |
| 72 | 6 | IPC | Interstitial progenitor cell | wk11 | TPM2 | 7169 | 12011 | 1.33 | 0.87 | 0.22 | 7.0749609889075E-52 | 2.3838373556025E-47 |
| 72 | 6 | IPC | Interstitial progenitor cell | wk11 | NUSAP1 | 51203 | 18538 | 1.31 | 0.71 | 0.14 | 1.0376693480979E-49 | 3.4963231014812E-45 |
| 72 | 6 | IPC | Interstitial progenitor cell | wk11 | COL3A1 | 1281 | 2201 | 1.31 | 0.96 | 0.43 | 1.7301991761362E-34 | 5.8297331040734E-30 |
| 72 | 6 | IPC | Interstitial progenitor cell | wk11 | CCNB1 | 891 | 1579 | 1.3 | 0.53 | 0.13 | 7.3152805381006E-30 | 2.4648106245076E-25 |
| 72 | 6 | IPC | Interstitial progenitor cell | wk11 | SMC4 | 10051 | 14013 | 1.25 | 0.79 | 0.28 | 4.0448567897331E-34 | 1.3628740467326E-29 |
| 72 | 6 | IPC | Interstitial progenitor cell | wk11 | HIST1H4C | 8364 | 4787 | 1.23 | 0.47 | 0.15 | 2.8497165984649E-18 | 9.6018351068677E-14 |
| 72 | 6 | IPC | Interstitial progenitor cell | wk11 | PIMREG | 54478 | 25483 | 1.21 | 0.55 | 0.09 | 1.5989111837133E-42 | 5.3873713424036E-38 |
| 72 | 6 | IPC | Interstitial progenitor cell | wk11 | IGFBP5 | 3488 | 5474 | 1.2 | 0.67 | 0.11 | 2.6993473654879E-48 | 9.0951810132748E-44 |
| 72 | 6 | IPC | Interstitial progenitor cell | wk11 | DCN | 1634 | 2705 | 1.2 | 0.62 | 0.11 | 6.0615693548148E-43 | 2.0423851784113E-38 |
| 72 | 6 | IPC | Interstitial progenitor cell | wk11 | PRC1 | 9055 | 9341 | 1.2 | 0.61 | 0.1 | 2.100525701445E-52 | 7.0775112984488E-48 |
| 72 | 6 | IPC | Interstitial progenitor cell | wk11 | TUBB6 | 84617 | 20776 | 1.16 | 0.76 | 0.22 | 8.1158816185962E-39 | 2.7345651525698E-34 |
| 72 | 6 | IPC | Interstitial progenitor cell | wk11 | TUBA1C | 84790 | 20768 | 1.15 | 0.64 | 0.22 | 4.8670154269105E-24 | 1.6398921779432E-19 |
| 72 | 6 | IPC | Interstitial progenitor cell | wk11 | MEG3 | 55384 | 14575 | 1.14 | 0.75 | 0.17 | 5.2943560791844E-42 | 1.7838803373204E-37 |
| 72 | 6 | IPC | Interstitial progenitor cell | wk11 | CKS2 | 1164 | 2000 | 1.12 | 0.67 | 0.33 | 6.1623036977536E-17 | 2.0763266079211E-12 |
| 72 | 6 | IPC | Interstitial progenitor cell | wk11 | AKAP12 | 9590 | 370 | 1.12 | 0.83 | 0.34 | 7.388392891556E-28 | 2.4894451008809E-23 |
| 72 | 6 | IPC | Interstitial progenitor cell | wk11 | TGFBI | 7045 | 11771 | 1.11 | 0.71 | 0.07 | 1.3318288548508E-83 | 4.4874641435342E-79 |
| 72 | 6 | IPC | Interstitial progenitor cell | wk11 | CALD1 | 800 | 1441 | 1.11 | 0.89 | 0.53 | 2.6593460242535E-25 | 8.9604004941197E-21 |
| 72 | 6 | IPC | Interstitial progenitor cell | wk11 | BIRC5 | 332 | 593 | 1.1 | 0.73 | 0.13 | 2.6473232163903E-55 | 8.9198908453053E-51 |
| 72 | 6 | IPC | Interstitial progenitor cell | wk11 | OLFML3 | 56944 | 24956 | 1.09 | 0.65 | 0.09 | 2.0830087165022E-60 | 7.0184895693826E-56 |
| 72 | 6 | IPC | Interstitial progenitor cell | wk11 | MXD3 | 83463 | 14008 | 1.09 | 0.59 | 0.06 | 1.8982422867832E-80 | 6.3959375610875E-76 |
| 72 | 6 | IPC | Interstitial progenitor cell | wk11 | KIF20B | 9585 | 7212 | 1.06 | 0.57 | 0.13 | 3.0829891685513E-32 | 1.0387823704517E-27 |
| 72 | 6 | IPC | Interstitial progenitor cell | wk11 | MOXD1 | 26002 | 21063 | 1.06 | 0.53 | 0.08 | 2.5514640968365E-45 | 8.5969031278809E-41 |
| 72 | 6 | IPC | Interstitial progenitor cell | wk11 | MARCKS | 4082 | 6759 | 1.06 | 0.96 | 0.66 | 2.6587276220754E-28 | 8.9583168498209E-24 |
| 72 | 6 | IPC | Interstitial progenitor cell | wk11 | H2AFX | 3014 | 4739 | 1.05 | 0.7 | 0.23 | 3.7433716120828E-26 | 1.2612916309752E-21 |
| 72 | 6 | IPC | Interstitial progenitor cell | wk11 | ASPM | 259266 | 19048 | 1.02 | 0.47 | 0.05 | 7.3380919767155E-59 | 2.4724967106345E-54 |
| 72 | 6 | IPC | Interstitial progenitor cell | wk11 | AURKB | 9212 | 11390 | 1.02 | 0.52 | 0.09 | 6.7010244232336E-41 | 2.2578431691643E-36 |
| 72 | 6 | IPC | Interstitial progenitor cell | wk11 | KPNA2 | 3838 | 6395 | 1.02 | 0.75 | 0.39 | 4.5963245676028E-18 | 1.5486855998081E-13 |
| 72 | 6 | IPC | Interstitial progenitor cell | wk11 | UBE2S | 27338 | 17895 | 1.01 | 0.55 | 0.25 | 1.1089968837869E-13 | 3.7366541002317E-9 |
| 72 | 6 | IPC | Interstitial progenitor cell | wk11 | TYMS | 7298 | 12441 | 1.01 | 0.76 | 0.25 | 3.1116867675815E-29 | 1.0484517394689E-24 |
| 72 | 6 | IPC | Interstitial progenitor cell | wk11 | CDC20 | 991 | 1723 | 1.01 | 0.48 | 0.08 | 3.572604672408E-35 | 1.2037534183212E-30 |
| 72 | 6 | IPC | Interstitial progenitor cell | wk11 | FBLN5 | 10516 | 3602 | 1.01 | 0.59 | 0.06 | 5.6295458229839E-67 | 1.8968191695962E-62 |
| 72 | 6 | IPC | Interstitial progenitor cell | wk11 | COL6A3 | 1293 | 2213 | 1 | 0.64 | 0.11 | 6.2773635248052E-45 | 2.1150948660479E-40 |
| 72 | 6 | IPC | Interstitial progenitor cell | wk11 | SERPINH1 | 871 | 1546 | 1 | 0.97 | 0.67 | 1.5323846483733E-33 | 5.1632168342289E-29 |
| 72 | 6 | IPC | Interstitial progenitor cell | wk11 | CTSC | 1075 | 2528 | 0.99 | 0.79 | 0.26 | 1.314629851178E-32 | 4.429513820559E-28 |
| 72 | 6 | IPC | Interstitial progenitor cell | wk11 | RRM2 | 6241 | 10452 | 0.98 | 0.52 | 0.11 | 5.6201675677277E-30 | 1.8936592602702E-25 |
| 72 | 6 | IPC | Interstitial progenitor cell | wk11 | COL5A2 | 1290 | 2210 | 0.97 | 0.64 | 0.08 | 4.7766937993382E-67 | 1.609459208749E-62 |
| 72 | 6 | IPC | Interstitial progenitor cell | wk11 | HMGN2 | 3151 | 4986 | 0.97 | 1 | 0.92 | 2.095519726665E-33 | 7.0606441670251E-29 |
| 72 | 6 | IPC | Interstitial progenitor cell | wk11 | TMSB15A | 11013 | 30744 | 0.97 | 0.88 | 0.31 | 4.2723208117719E-33 | 1.4395157743184E-28 |
| 72 | 6 | IPC | Interstitial progenitor cell | wk11 | TUBA1B | 10376 | 18809 | 0.96 | 1 | 0.88 | 7.2584002274615E-29 | 2.4456453726409E-24 |
| 72 | 6 | IPC | Interstitial progenitor cell | wk11 | FLRT2 | 23768 | 3761 | 0.95 | 0.56 | 0.1 | 1.7700551372564E-38 | 5.9640237794719E-34 |
| 72 | 6 | IPC | Interstitial progenitor cell | wk11 | CKS1B | 1163 | 19083 | 0.94 | 0.82 | 0.37 | 3.8300543811363E-24 | 1.2904985231801E-19 |
| 72 | 6 | IPC | Interstitial progenitor cell | wk11 | TM4SF1 | 4071 | 11853 | 0.94 | 0.38 | 0.02 | 5.8036526756458E-78 | 1.9554827325321E-73 |
| 72 | 6 | IPC | Interstitial progenitor cell | wk11 | SGO2 | 151246 | 30812 | 0.94 | 0.51 | 0.08 | 2.1086933064074E-42 | 7.1050312266093E-38 |
| 72 | 6 | IPC | Interstitial progenitor cell | wk11 | PCDH18 | 54510 | 14268 | 0.93 | 0.59 | 0.11 | 5.6790731915825E-37 | 1.9135069211718E-32 |
| 72 | 6 | IPC | Interstitial progenitor cell | wk11 | RARRES2 | 5919 | 9868 | 0.93 | 0.59 | 0.12 | 3.0407390520785E-37 | 1.0245466162073E-32 |
| 72 | 6 | IPC | Interstitial progenitor cell | wk11 | TPX2 | 22974 | 1249 | 0.93 | 0.48 | 0.09 | 1.2165451832502E-33 | 4.0990273404432E-29 |
| 72 | 6 | IPC | Interstitial progenitor cell | wk11 | FBLN1 | 2192 | 3600 | 0.93 | 0.78 | 0.38 | 1.2785897074397E-19 | 4.3080801602472E-15 |
| 72 | 6 | IPC | Interstitial progenitor cell | wk11 | ZEB2 | 9839 | 14881 | 0.92 | 0.64 | 0.19 | 3.3065625883415E-27 | 1.1141131985158E-22 |
| 72 | 6 | IPC | Interstitial progenitor cell | wk11 | NUF2 | 83540 | 14621 | 0.92 | 0.41 | 0.08 | 5.5052527462181E-27 | 1.8549398603107E-22 |
| 72 | 6 | IPC | Interstitial progenitor cell | wk11 | IGF2 | 3481 | 5466 | 0.91 | 0.91 | 0.54 | 2.7361234680076E-18 | 9.2190944131046E-14 |
| 72 | 6 | IPC | Interstitial progenitor cell | wk11 | MAD2L1 | 4085 | 6763 | 0.91 | 0.78 | 0.21 | 1.4071557922033E-35 | 4.7412707262496E-31 |
| 72 | 6 | IPC | Interstitial progenitor cell | wk11 | CCL2 | 6347 | 10618 | 0.91 | 0.28 | 0.01 | 2.3591439242448E-54 | 7.9488995383505E-50 |
| 72 | 6 | IPC | Interstitial progenitor cell | wk11 | ZWINT | 11130 | 13195 | 0.9 | 0.65 | 0.21 | 2.1195083165617E-26 | 7.1414713218231E-22 |
| 72 | 6 | IPC | Interstitial progenitor cell | wk11 | CENPA | 1058 | 1851 | 0.9 | 0.39 | 0.05 | 1.6384265482542E-40 | 5.5205144116878E-36 |
| 72 | 6 | IPC | Interstitial progenitor cell | wk11 | CENPE | 1062 | 1856 | 0.9 | 0.44 | 0.05 | 5.4199454009291E-49 | 1.8261964033891E-44 |
| 72 | 6 | IPC | Interstitial progenitor cell | wk11 | ALX1 | 8092 | 1494 | 0.89 | 0.39 | 0.04 | 1.526656610866E-40 | 5.143916784652E-36 |
| 72 | 6 | IPC | Interstitial progenitor cell | wk11 | CCNB2 | 9133 | 1580 | 0.89 | 0.55 | 0.14 | 2.1111513207146E-27 | 7.1133132600159E-23 |
| 72 | 6 | IPC | Interstitial progenitor cell | wk11 | EMCN | 51705 | 16041 | 0.88 | 0.46 | 0.05 | 1.1225632816384E-49 | 3.7823647211525E-45 |
| 72 | 6 | IPC | Interstitial progenitor cell | wk11 | FBN2 | 2201 | 3604 | 0.88 | 0.52 | 0.08 | 7.9301474482574E-42 | 2.6719838812158E-37 |
| 72 | 6 | IPC | Interstitial progenitor cell | wk11 | PLK2 | 10769 | 19699 | 0.88 | 0.66 | 0.28 | 7.337166856386E-18 | 2.4721850005907E-13 |
| 72 | 6 | IPC | Interstitial progenitor cell | wk11 | CDKN3 | 1033 | 1791 | 0.87 | 0.46 | 0.07 | 1.3452739730414E-36 | 4.5327661247657E-32 |
| 72 | 6 | IPC | Interstitial progenitor cell | wk11 | PDGFRA | 5156 | 8803 | 0.86 | 0.53 | 0.05 | 1.8588034468321E-63 | 6.2630523337562E-59 |
| 72 | 6 | IPC | Interstitial progenitor cell | wk11 | H2AFZ | 3015 | 4741 | 0.86 | 0.97 | 0.85 | 5.5551734400261E-26 | 1.8717601388824E-21 |
| 72 | 6 | IPC | Interstitial progenitor cell | wk11 | HSPB1 | 3315 | 5246 | 0.86 | 0.76 | 0.5 | 1.7162188321713E-15 | 5.782627733118E-11 |
| 72 | 6 | IPC | Interstitial progenitor cell | wk11 | NFIB | 4781 | 7785 | 0.85 | 0.46 | 0.06 | 3.1365634472395E-41 | 1.0568336879129E-36 |
| 72 | 6 | IPC | Interstitial progenitor cell | wk11 | ALDH1A2 | 8854 | 15472 | 0.85 | 0.61 | 0.3 | 3.5427779261129E-15 | 1.1937035944245E-10 |
| 72 | 6 | IPC | Interstitial progenitor cell | wk11 | MDFI | 4188 | 6967 | 0.84 | 0.65 | 0.13 | 6.3296710866699E-39 | 2.1327193759426E-34 |
| 72 | 6 | IPC | Interstitial progenitor cell | wk11 | SMC2 | 10592 | 14011 | 0.84 | 0.69 | 0.24 | 3.7712955619384E-24 | 1.2707003266395E-19 |
| 72 | 6 | IPC | Interstitial progenitor cell | wk11 | CPED1 | 79974 | 26159 | 0.84 | 0.46 | 0.05 | 9.3976191945945E-54 | 3.1664338114267E-49 |
| 72 | 6 | IPC | Interstitial progenitor cell | wk11 | GUCY1A1 | 2982 | 4685 | 0.84 | 0.56 | 0.08 | 2.1165566750087E-46 | 7.1315260607743E-42 |
| 72 | 6 | IPC | Interstitial progenitor cell | wk11 | COL9A3 | 1299 | 2219 | 0.83 | 0.48 | 0.04 | 1.8444166208131E-68 | 6.2145773621676E-64 |
| 72 | 6 | IPC | Interstitial progenitor cell | wk11 | FN1 | 2335 | 3778 | 0.83 | 0.56 | 0.1 | 7.2166566048413E-39 | 2.4315802764352E-34 |
| 72 | 6 | IPC | Interstitial progenitor cell | wk11 | PIF1 | 80119 | 26220 | 0.83 | 0.29 | 0.03 | 1.719412123472E-33 | 5.7933872088266E-29 |
| 72 | 6 | IPC | Interstitial progenitor cell | wk11 | IRF1 | 3659 | 6116 | 0.82 | 0.5 | 0.29 | 2.5702309198999E-7 | 0.0086601360615106 |
| 72 | 6 | IPC | Interstitial progenitor cell | wk11 | LMNB1 | 4001 | 6637 | 0.8 | 0.75 | 0.28 | 3.0380460782271E-22 | 1.0236392455979E-17 |
| 72 | 6 | IPC | Interstitial progenitor cell | wk11 | CDH11 | 1009 | 1750 | 0.8 | 0.6 | 0.24 | 2.0858078235889E-15 | 7.0279208808004E-11 |
| 72 | 6 | IPC | Interstitial progenitor cell | wk11 | NUCKS1 | 64710 | 29923 | 0.8 | 0.96 | 0.82 | 2.0885873564825E-22 | 7.0372862389321E-18 |
| 72 | 6 | IPC | Interstitial progenitor cell | wk11 | CENPK | 64105 | 29479 | 0.79 | 0.53 | 0.11 | 2.2107565351001E-33 | 7.4489230693663E-29 |
| 72 | 6 | IPC | Interstitial progenitor cell | wk11 | CKAP5 | 9793 | 28959 | 0.79 | 0.46 | 0.12 | 7.7327312518657E-22 | 2.6054664680036E-17 |
| 72 | 6 | IPC | Interstitial progenitor cell | wk11 | BASP1 | 10409 | 957 | 0.79 | 0.7 | 0.34 | 1.6171089550437E-16 | 5.4486869131243E-12 |