Marker Genes
Dataset: Single-cell transcriptomics reveals gene expression dynamics of human fetal kidney development
- tissue: Kidney
- ontology: Kidney
- genotype: -
- stage: Fetal
- treatment condition: WT
- cell/nucleus: Cells
- pmid: 30789893
- subset name: wk11
- total genes: Not reported
- clustering: scran
- pseudotime: Monocle 2
- link: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE114530
Rows:100
dataset id | cluster id | cluster name | cell type name | sample id | gene symbol | entrez geneid | species specific geneid |
avg log fc (?)
|
pct 1 | pct 2 | p value | padj |
---|---|---|---|---|---|---|---|---|---|---|---|---|
72 | 5 | ICb | Interstitial cells b | wk11 | SULT1E1 | 6783 | 11377 | 3.07 | 0.98 | 0.08 | 0 | 0 |
72 | 5 | ICb | Interstitial cells b | wk11 | CLDN11 | 5010 | 8514 | 2.54 | 0.79 | 0.06 | 0 | 0 |
72 | 5 | ICb | Interstitial cells b | wk11 | COL1A1 | 1277 | 2197 | 2.41 | 0.99 | 0.22 | 1.50993327864817e-261 | 5.08756918907715e-257 |
72 | 5 | ICb | Interstitial cells b | wk11 | COL1A2 | 1278 | 2198 | 2.24 | 0.96 | 0.19 | 9.26566371246564e-261 | 3.12197273127817e-256 |
72 | 5 | ICb | Interstitial cells b | wk11 | CTSC | 1075 | 2528 | 2.06 | 0.9 | 0.23 | 7.77665484653431e-206 | 2.62026608399127e-201 |
72 | 5 | ICb | Interstitial cells b | wk11 | LGALS1 | 3956 | 6561 | 2.05 | 0.94 | 0.11 | 0 | 0 |
72 | 5 | ICb | Interstitial cells b | wk11 | IGFBP5 | 3488 | 5474 | 1.94 | 0.79 | 0.08 | 2.87265197148559e-300 | 9.67911355272356e-296 |
72 | 5 | ICb | Interstitial cells b | wk11 | MFAP4 | 4239 | 7035 | 1.93 | 0.85 | 0.11 | 1.74035957311186e-276 | 5.86396754564309e-272 |
72 | 5 | ICb | Interstitial cells b | wk11 | MEG3 | 55384 | 14575 | 1.92 | 0.91 | 0.13 | 1.82670903351943e-277 | 6.15491341754038e-273 |
72 | 5 | ICb | Interstitial cells b | wk11 | COL3A1 | 1281 | 2201 | 1.87 | 0.99 | 0.4 | 3.80840253680863e-181 | 1.2832031507523e-176 |
72 | 5 | ICb | Interstitial cells b | wk11 | TGFBI | 7045 | 11771 | 1.87 | 0.82 | 0.04 | 0 | 0 |
72 | 5 | ICb | Interstitial cells b | wk11 | OLFML3 | 56944 | 24956 | 1.78 | 0.78 | 0.05 | 0 | 0 |
72 | 5 | ICb | Interstitial cells b | wk11 | PCOLCE | 5118 | 8738 | 1.77 | 0.82 | 0.06 | 0 | 0 |
72 | 5 | ICb | Interstitial cells b | wk11 | TNC | 3371 | 5318 | 1.76 | 0.73 | 0.04 | 0 | 0 |
72 | 5 | ICb | Interstitial cells b | wk11 | MOXD1 | 26002 | 21063 | 1.75 | 0.74 | 0.04 | 0 | 0 |
72 | 5 | ICb | Interstitial cells b | wk11 | CPE | 1363 | 2303 | 1.72 | 0.73 | 0.18 | 5.58794209095886e-145 | 1.88280120812768e-140 |
72 | 5 | ICb | Interstitial cells b | wk11 | ALX1 | 8092 | 1494 | 1.59 | 0.58 | 0.02 | 0 | 0 |
72 | 5 | ICb | Interstitial cells b | wk11 | PLAT | 5327 | 9051 | 1.58 | 0.74 | 0.12 | 6.3890795359621e-211 | 2.15273645884707e-206 |
72 | 5 | ICb | Interstitial cells b | wk11 | PDGFRA | 5156 | 8803 | 1.56 | 0.64 | 0.02 | 0 | 0 |
72 | 5 | ICb | Interstitial cells b | wk11 | PRSS23 | 11098 | 14370 | 1.56 | 0.65 | 0.08 | 6.41605180153956e-204 | 2.16182449401074e-199 |
72 | 5 | ICb | Interstitial cells b | wk11 | AKAP12 | 9590 | 370 | 1.53 | 0.86 | 0.31 | 2.12330988057725e-130 | 7.15428031161698e-126 |
72 | 5 | ICb | Interstitial cells b | wk11 | OGN | 4969 | 8126 | 1.48 | 0.48 | 0.01 | 0 | 0 |
72 | 5 | ICb | Interstitial cells b | wk11 | GUCY1A1 | 2982 | 4685 | 1.48 | 0.63 | 0.06 | 2.95680916468814e-246 | 9.96267279950022e-242 |
72 | 5 | ICb | Interstitial cells b | wk11 | DCN | 1634 | 2705 | 1.44 | 0.63 | 0.09 | 3.92764948346331e-169 | 1.32338221695813e-164 |
72 | 5 | ICb | Interstitial cells b | wk11 | COL6A3 | 1293 | 2213 | 1.42 | 0.67 | 0.08 | 1.08907244019097e-210 | 3.66952067997947e-206 |
72 | 5 | ICb | Interstitial cells b | wk11 | PLK2 | 10769 | 19699 | 1.4 | 0.67 | 0.26 | 1.99009555255416e-84 | 6.70542795477598e-80 |
72 | 5 | ICb | Interstitial cells b | wk11 | COL5A2 | 1290 | 2210 | 1.37 | 0.6 | 0.05 | 3.58943670970066e-232 | 1.20942480496654e-227 |
72 | 5 | ICb | Interstitial cells b | wk11 | MMP2 | 4313 | 7166 | 1.36 | 0.64 | 0.06 | 2.30064623264555e-247 | 7.7517974162759e-243 |
72 | 5 | ICb | Interstitial cells b | wk11 | ATP2B1 | 490 | 814 | 1.36 | 0.84 | 0.49 | 4.50329879750964e-92 | 1.5173414968329e-87 |
72 | 5 | ICb | Interstitial cells b | wk11 | EMILIN1 | 11117 | 19880 | 1.36 | 0.69 | 0.12 | 8.9789505851955e-171 | 3.02536761017577e-166 |
72 | 5 | ICb | Interstitial cells b | wk11 | B2M | 567 | 914 | 1.35 | 0.97 | 0.62 | 4.7155744680445e-129 | 1.58886566126291e-124 |
72 | 5 | ICb | Interstitial cells b | wk11 | FBLN5 | 10516 | 3602 | 1.34 | 0.55 | 0.04 | 1.22499091133174e-223 | 4.12748437664115e-219 |
72 | 5 | ICb | Interstitial cells b | wk11 | IGF1 | 3479 | 5464 | 1.34 | 0.32 | 0.007 | 8.39968035725199e-246 | 2.83018829957249e-241 |
72 | 5 | ICb | Interstitial cells b | wk11 | FN1 | 2335 | 3778 | 1.34 | 0.6 | 0.07 | 2.73749719749729e-180 | 9.22372305724738e-176 |
72 | 5 | ICb | Interstitial cells b | wk11 | TPM2 | 7169 | 12011 | 1.33 | 0.73 | 0.2 | 1.21021955739981e-126 | 4.07771377670292e-122 |
72 | 5 | ICb | Interstitial cells b | wk11 | CALD1 | 800 | 1441 | 1.28 | 0.84 | 0.52 | 8.52177683990157e-83 | 2.87132748843644e-78 |
72 | 5 | ICb | Interstitial cells b | wk11 | PCDH18 | 54510 | 14268 | 1.27 | 0.62 | 0.09 | 3.23097126344401e-168 | 1.08864345750482e-163 |
72 | 5 | ICb | Interstitial cells b | wk11 | COL21A1 | 81578 | 17025 | 1.27 | 0.48 | 0.02 | 1.82420121296553e-252 | 6.14646356696605e-248 |
72 | 5 | ICb | Interstitial cells b | wk11 | ZEB2 | 9839 | 14881 | 1.26 | 0.68 | 0.16 | 1.74280078691201e-131 | 5.87219297142131e-127 |
72 | 5 | ICb | Interstitial cells b | wk11 | NTM | 50863 | 17941 | 1.24 | 0.48 | 0.05 | 7.5540793233045e-174 | 2.54527148719422e-169 |
72 | 5 | ICb | Interstitial cells b | wk11 | SYT1 | 6857 | 11509 | 1.24 | 0.62 | 0.1 | 8.62326074034726e-162 | 2.90552147385261e-157 |
72 | 5 | ICb | Interstitial cells b | wk11 | FLRT2 | 23768 | 3761 | 1.22 | 0.58 | 0.08 | 1.93575922614488e-169 | 6.52234713657256e-165 |
72 | 5 | ICb | Interstitial cells b | wk11 | EDNRB | 1910 | 3180 | 1.22 | 0.48 | 0.03 | 1.57872503923738e-229 | 5.31935614720643e-225 |
72 | 5 | ICb | Interstitial cells b | wk11 | SNAI2 | 6591 | 11094 | 1.22 | 0.61 | 0.12 | 1.09312721722833e-131 | 3.68318284572914e-127 |
72 | 5 | ICb | Interstitial cells b | wk11 | ALDH1A2 | 8854 | 15472 | 1.19 | 0.67 | 0.28 | 5.41706261654007e-76 | 1.82522507801701e-71 |
72 | 5 | ICb | Interstitial cells b | wk11 | ACTA2 | 59 | 130 | 1.15 | 0.23 | 0.04 | 1.58952981094811e-41 | 5.35576174500858e-37 |
72 | 5 | ICb | Interstitial cells b | wk11 | EMCN | 51705 | 16041 | 1.13 | 0.48 | 0.03 | 5.63184656290491e-216 | 1.89759438090518e-211 |
72 | 5 | ICb | Interstitial cells b | wk11 | COL6A2 | 1292 | 2212 | 1.12 | 0.57 | 0.1 | 1.90879162990864e-132 | 6.43148251781418e-128 |
72 | 5 | ICb | Interstitial cells b | wk11 | MDFI | 4188 | 6967 | 1.1 | 0.55 | 0.11 | 1.35733880715809e-109 | 4.57341737683847e-105 |
72 | 5 | ICb | Interstitial cells b | wk11 | LRRC17 | 10234 | 16895 | 1.07 | 0.43 | 0.03 | 6.74726801208019e-198 | 2.2734244839903e-193 |
72 | 5 | ICb | Interstitial cells b | wk11 | AGTR2 | 186 | 338 | 1.07 | 0.38 | 0.01 | 6.83583907725563e-254 | 2.30326761869051e-249 |
72 | 5 | ICb | Interstitial cells b | wk11 | MARCKS | 4082 | 6759 | 1.06 | 0.94 | 0.65 | 1.90093501499268e-90 | 6.40501043951634e-86 |
72 | 5 | ICb | Interstitial cells b | wk11 | CPED1 | 79974 | 26159 | 1.06 | 0.41 | 0.03 | 3.72273125840455e-159 | 1.25433707020683e-154 |
72 | 5 | ICb | Interstitial cells b | wk11 | ALCAM | 214 | 400 | 1.04 | 0.64 | 0.28 | 1.92363819938336e-62 | 6.48150654900228e-58 |
72 | 5 | ICb | Interstitial cells b | wk11 | COL5A1 | 1289 | 2209 | 1.02 | 0.41 | 0.04 | 2.54616276934272e-142 | 8.57904083502335e-138 |
72 | 5 | ICb | Interstitial cells b | wk11 | C7 | 730 | 1346 | 1 | 0.34 | 0.01 | 1.236622983905e-188 | 4.1666774819695e-184 |
72 | 5 | ICb | Interstitial cells b | wk11 | SERPINH1 | 871 | 1546 | 1 | 0.93 | 0.66 | 5.0185863617553e-92 | 1.69096248872983e-87 |
72 | 5 | ICb | Interstitial cells b | wk11 | COL6A1 | 1291 | 2211 | 1 | 0.71 | 0.32 | 1.30755868571352e-74 | 4.40568823564315e-70 |
72 | 5 | ICb | Interstitial cells b | wk11 | CLMP | 79827 | 24039 | 0.99 | 0.41 | 0.06 | 2.44050243302688e-100 | 8.22302889784078e-96 |
72 | 5 | ICb | Interstitial cells b | wk11 | IGFBP7 | 3490 | 5476 | 0.96 | 0.91 | 0.45 | 1.23870117659279e-87 | 4.17367974441174e-83 |
72 | 5 | ICb | Interstitial cells b | wk11 | ITM2A | 9452 | 6173 | 0.96 | 0.19 | 0.03 | 2.52949745319744e-40 | 8.52288871880345e-36 |
72 | 5 | ICb | Interstitial cells b | wk11 | LDB2 | 9079 | 6533 | 0.96 | 0.37 | 0.05 | 3.63557658948953e-106 | 1.2249711760626e-101 |
72 | 5 | ICb | Interstitial cells b | wk11 | COL4A1 | 1282 | 2202 | 0.95 | 0.58 | 0.27 | 3.88181086376993e-50 | 1.30793735243864e-45 |
72 | 5 | ICb | Interstitial cells b | wk11 | PTN | 5764 | 9630 | 0.95 | 0.61 | 0.36 | 1.01101698177552e-35 | 3.40652061839445e-31 |
72 | 5 | ICb | Interstitial cells b | wk11 | FBN2 | 2201 | 3604 | 0.94 | 0.45 | 0.07 | 2.63136977611431e-112 | 8.86613732363955e-108 |
72 | 5 | ICb | Interstitial cells b | wk11 | TAGLN | 6876 | 11553 | 0.94 | 0.28 | 0.05 | 1.74691484577059e-55 | 5.88605488133942e-51 |
72 | 5 | ICb | Interstitial cells b | wk11 | CDH11 | 1009 | 1750 | 0.94 | 0.57 | 0.22 | 2.21406796135255e-58 | 7.46008058898127e-54 |
72 | 5 | ICb | Interstitial cells b | wk11 | PLAC9 | 219348 | 19255 | 0.93 | 0.36 | 0.01 | 2.99217141643406e-198 | 1.00818223705329e-193 |
72 | 5 | ICb | Interstitial cells b | wk11 | PCDH9 | 5101 | 8661 | 0.92 | 0.49 | 0.18 | 1.06332869203565e-49 | 3.58277969494493e-45 |
72 | 5 | ICb | Interstitial cells b | wk11 | POSTN | 10631 | 16953 | 0.92 | 0.15 | 0.05 | 1.96266381174426e-13 | 6.61299944729109e-09 |
72 | 5 | ICb | Interstitial cells b | wk11 | IGF2 | 3481 | 5466 | 0.92 | 0.92 | 0.53 | 9.0299509261081e-72 | 3.04255166504286e-67 |
72 | 5 | ICb | Interstitial cells b | wk11 | SYNPO2 | 171024 | 17732 | 0.91 | 0.31 | 0.01 | 4.36914440170447e-195 | 1.47213951471031e-190 |
72 | 5 | ICb | Interstitial cells b | wk11 | MYLK | 4638 | 7590 | 0.9 | 0.46 | 0.12 | 8.84323138009909e-68 | 2.97963838121059e-63 |
72 | 5 | ICb | Interstitial cells b | wk11 | APCDD1 | 147495 | 15718 | 0.9 | 0.26 | 0.02 | 3.98345767534896e-103 | 1.34218622913208e-98 |
72 | 5 | ICb | Interstitial cells b | wk11 | ANGPT1 | 284 | 484 | 0.89 | 0.34 | 0.04 | 6.1170077068539e-93 | 2.06106457674735e-88 |
72 | 5 | ICb | Interstitial cells b | wk11 | S1PR3 | 1903 | 3167 | 0.89 | 0.35 | 0.03 | 1.80770083262209e-125 | 6.09086718543688e-121 |
72 | 5 | ICb | Interstitial cells b | wk11 | TSHZ2 | 128553 | 13010 | 0.89 | 0.41 | 0.12 | 5.79241267470848e-53 | 1.95169552661628e-48 |
72 | 5 | ICb | Interstitial cells b | wk11 | LMO4 | 8543 | 6644 | 0.89 | 0.5 | 0.33 | 6.04105191023469e-24 | 2.03547203063448e-19 |
72 | 5 | ICb | Interstitial cells b | wk11 | NRP1 | 8829 | 8004 | 0.88 | 0.47 | 0.17 | 1.47218547265913e-50 | 4.96038173157767e-46 |
72 | 5 | ICb | Interstitial cells b | wk11 | EDNRA | 1909 | 3179 | 0.87 | 0.35 | 0.06 | 5.14450378143394e-74 | 1.73338910411635e-69 |
72 | 5 | ICb | Interstitial cells b | wk11 | KCNQ1OT1 | 10984 | 6295 | 0.85 | 0.78 | 0.53 | 3.69667550051109e-47 | 1.24555784314221e-42 |
72 | 5 | ICb | Interstitial cells b | wk11 | TBX3 | 6926 | 11602 | 0.85 | 0.31 | 0.04 | 8.58786092909594e-86 | 2.89359386144959e-81 |
72 | 5 | ICb | Interstitial cells b | wk11 | NFIA | 4774 | 7784 | 0.84 | 0.33 | 0.04 | 8.74103204991551e-97 | 2.94520333889853e-92 |
72 | 5 | ICb | Interstitial cells b | wk11 | PLEKHA5 | 54477 | 30036 | 0.84 | 0.49 | 0.23 | 2.49201876587697e-36 | 8.39660802974585e-32 |
72 | 5 | ICb | Interstitial cells b | wk11 | MEIS1 | 4211 | 7000 | 0.84 | 0.54 | 0.21 | 5.13319023432864e-50 | 1.72957711755469e-45 |
72 | 5 | ICb | Interstitial cells b | wk11 | FIBIN | 387758 | 33747 | 0.82 | 0.23 | 0.01 | 2.48643585796224e-107 | 8.37779697981797e-103 |
72 | 5 | ICb | Interstitial cells b | wk11 | WLS | 79971 | 30238 | 0.82 | 0.37 | 0.08 | 4.60013116675451e-64 | 1.54996819532626e-59 |
72 | 5 | ICb | Interstitial cells b | wk11 | RBP1 | 5947 | 9919 | 0.82 | 0.88 | 0.54 | 2.07359299850634e-63 | 6.98676424916725e-59 |
72 | 5 | ICb | Interstitial cells b | wk11 | NCAM1 | 4684 | 7656 | 0.82 | 0.45 | 0.17 | 2.94857922080354e-41 | 9.93494282657544e-37 |
72 | 5 | ICb | Interstitial cells b | wk11 | CHST2 | 9435 | 1970 | 0.81 | 0.34 | 0.09 | 3.37245968512979e-49 | 1.13631656630763e-44 |
72 | 5 | ICb | Interstitial cells b | wk11 | CCN1 | 3491 | 2654 | 0.8 | 0.76 | 0.6 | 1.94750855714869e-29 | 6.56193533245678e-25 |
72 | 5 | ICb | Interstitial cells b | wk11 | OAF | 220323 | 28752 | 0.79 | 0.35 | 0.07 | 4.89344149417316e-65 | 1.6487961770467e-60 |
72 | 5 | ICb | Interstitial cells b | wk11 | VCAN | 1462 | 2464 | 0.78 | 0.72 | 0.43 | 1.97395519932841e-42 | 6.65104464861714e-38 |
72 | 5 | ICb | Interstitial cells b | wk11 | COL16A1 | 1307 | 2193 | 0.77 | 0.27 | 0.01 | 6.54229236393863e-139 | 2.20435998910548e-134 |
72 | 5 | ICb | Interstitial cells b | wk11 | SH3BGRL | 6451 | 10823 | 0.77 | 0.66 | 0.5 | 1.44357493948664e-33 | 4.86398140110629e-29 |
72 | 5 | ICb | Interstitial cells b | wk11 | THY1 | 7070 | 11801 | 0.76 | 0.31 | 0.05 | 1.80609987345721e-62 | 6.08547291362672e-58 |
72 | 5 | ICb | Interstitial cells b | wk11 | CHODL | 140578 | 17807 | 0.76 | 0.16 | 0.01 | 6.75280997835963e-74 | 2.27529179410849e-69 |
72 | 5 | ICb | Interstitial cells b | wk11 | SERPINE2 | 5270 | 8951 | 0.75 | 0.48 | 0.26 | 4.90911793316316e-28 | 1.65407819639999e-23 |
72 | 5 | ICb | Interstitial cells b | wk11 | SLC40A1 | 30061 | 10909 | 0.75 | 0.37 | 0.14 | 1.08608241256667e-32 | 3.65944608090214e-28 |
72 | 5 | ICb | Interstitial cells b | wk11 | FST | 10468 | 3971 | 0.75 | 0.27 | 0.04 | 3.08321646016443e-60 | 1.0388589540878e-55 |