Marker Genes
Dataset: Single-cell transcriptomics reveals gene expression dynamics of human fetal kidney development
- tissue: Kidney
- ontology: Kidney
- genotype: -
- stage: Fetal
- treatment condition: WT
- cell/nucleus: Cells
- pmid: 30789893
- subset name: wk11
- total genes: Not reported
- clustering: scran
- pseudotime: Monocle 2
- link: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE114530
Rows:100
| dataset id | cluster id | cluster name | cell type name | sample id | gene symbol | entrez geneid | species specific geneid |
avg log fc (?)
|
pct 1 | pct 2 | p value | padj |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 72 | 5 | ICb | Interstitial cells b | wk11 | SULT1E1 | 6783 | 11377 | 3.07 | 0.98 | 0.08 | 0 | 0 |
| 72 | 5 | ICb | Interstitial cells b | wk11 | CLDN11 | 5010 | 8514 | 2.54 | 0.79 | 0.06 | 0 | 0 |
| 72 | 5 | ICb | Interstitial cells b | wk11 | COL1A1 | 1277 | 2197 | 2.41 | 0.99 | 0.22 | 1.5099332786482E-261 | 5.0875691890771E-257 |
| 72 | 5 | ICb | Interstitial cells b | wk11 | COL1A2 | 1278 | 2198 | 2.24 | 0.96 | 0.19 | 9.2656637124656E-261 | 3.1219727312782E-256 |
| 72 | 5 | ICb | Interstitial cells b | wk11 | CTSC | 1075 | 2528 | 2.06 | 0.9 | 0.23 | 7.7766548465343E-206 | 2.6202660839913E-201 |
| 72 | 5 | ICb | Interstitial cells b | wk11 | LGALS1 | 3956 | 6561 | 2.05 | 0.94 | 0.11 | 0 | 0 |
| 72 | 5 | ICb | Interstitial cells b | wk11 | IGFBP5 | 3488 | 5474 | 1.94 | 0.79 | 0.08 | 2.8726519714856E-300 | 9.6791135527236E-296 |
| 72 | 5 | ICb | Interstitial cells b | wk11 | MFAP4 | 4239 | 7035 | 1.93 | 0.85 | 0.11 | 1.7403595731119E-276 | 5.8639675456431E-272 |
| 72 | 5 | ICb | Interstitial cells b | wk11 | MEG3 | 55384 | 14575 | 1.92 | 0.91 | 0.13 | 1.8267090335194E-277 | 6.1549134175404E-273 |
| 72 | 5 | ICb | Interstitial cells b | wk11 | COL3A1 | 1281 | 2201 | 1.87 | 0.99 | 0.4 | 3.8084025368086E-181 | 1.2832031507523E-176 |
| 72 | 5 | ICb | Interstitial cells b | wk11 | TGFBI | 7045 | 11771 | 1.87 | 0.82 | 0.04 | 0 | 0 |
| 72 | 5 | ICb | Interstitial cells b | wk11 | OLFML3 | 56944 | 24956 | 1.78 | 0.78 | 0.05 | 0 | 0 |
| 72 | 5 | ICb | Interstitial cells b | wk11 | PCOLCE | 5118 | 8738 | 1.77 | 0.82 | 0.06 | 0 | 0 |
| 72 | 5 | ICb | Interstitial cells b | wk11 | TNC | 3371 | 5318 | 1.76 | 0.73 | 0.04 | 0 | 0 |
| 72 | 5 | ICb | Interstitial cells b | wk11 | MOXD1 | 26002 | 21063 | 1.75 | 0.74 | 0.04 | 0 | 0 |
| 72 | 5 | ICb | Interstitial cells b | wk11 | CPE | 1363 | 2303 | 1.72 | 0.73 | 0.18 | 5.5879420909589E-145 | 1.8828012081277E-140 |
| 72 | 5 | ICb | Interstitial cells b | wk11 | ALX1 | 8092 | 1494 | 1.59 | 0.58 | 0.02 | 0 | 0 |
| 72 | 5 | ICb | Interstitial cells b | wk11 | PLAT | 5327 | 9051 | 1.58 | 0.74 | 0.12 | 6.3890795359621E-211 | 2.1527364588471E-206 |
| 72 | 5 | ICb | Interstitial cells b | wk11 | PDGFRA | 5156 | 8803 | 1.56 | 0.64 | 0.02 | 0 | 0 |
| 72 | 5 | ICb | Interstitial cells b | wk11 | PRSS23 | 11098 | 14370 | 1.56 | 0.65 | 0.08 | 6.4160518015396E-204 | 2.1618244940107E-199 |
| 72 | 5 | ICb | Interstitial cells b | wk11 | AKAP12 | 9590 | 370 | 1.53 | 0.86 | 0.31 | 2.1233098805772E-130 | 7.154280311617E-126 |
| 72 | 5 | ICb | Interstitial cells b | wk11 | OGN | 4969 | 8126 | 1.48 | 0.48 | 0.01 | 0 | 0 |
| 72 | 5 | ICb | Interstitial cells b | wk11 | GUCY1A1 | 2982 | 4685 | 1.48 | 0.63 | 0.06 | 2.9568091646881E-246 | 9.9626727995002E-242 |
| 72 | 5 | ICb | Interstitial cells b | wk11 | DCN | 1634 | 2705 | 1.44 | 0.63 | 0.09 | 3.9276494834633E-169 | 1.3233822169581E-164 |
| 72 | 5 | ICb | Interstitial cells b | wk11 | COL6A3 | 1293 | 2213 | 1.42 | 0.67 | 0.08 | 1.089072440191E-210 | 3.6695206799795E-206 |
| 72 | 5 | ICb | Interstitial cells b | wk11 | PLK2 | 10769 | 19699 | 1.4 | 0.67 | 0.26 | 1.9900955525542E-84 | 6.705427954776E-80 |
| 72 | 5 | ICb | Interstitial cells b | wk11 | COL5A2 | 1290 | 2210 | 1.37 | 0.6 | 0.05 | 3.5894367097007E-232 | 1.2094248049665E-227 |
| 72 | 5 | ICb | Interstitial cells b | wk11 | MMP2 | 4313 | 7166 | 1.36 | 0.64 | 0.06 | 2.3006462326455E-247 | 7.7517974162759E-243 |
| 72 | 5 | ICb | Interstitial cells b | wk11 | ATP2B1 | 490 | 814 | 1.36 | 0.84 | 0.49 | 4.5032987975096E-92 | 1.5173414968329E-87 |
| 72 | 5 | ICb | Interstitial cells b | wk11 | EMILIN1 | 11117 | 19880 | 1.36 | 0.69 | 0.12 | 8.9789505851955E-171 | 3.0253676101758E-166 |
| 72 | 5 | ICb | Interstitial cells b | wk11 | B2M | 567 | 914 | 1.35 | 0.97 | 0.62 | 4.7155744680445E-129 | 1.5888656612629E-124 |
| 72 | 5 | ICb | Interstitial cells b | wk11 | FBLN5 | 10516 | 3602 | 1.34 | 0.55 | 0.04 | 1.2249909113317E-223 | 4.1274843766412E-219 |
| 72 | 5 | ICb | Interstitial cells b | wk11 | IGF1 | 3479 | 5464 | 1.34 | 0.32 | 0.007 | 8.399680357252E-246 | 2.8301882995725E-241 |
| 72 | 5 | ICb | Interstitial cells b | wk11 | FN1 | 2335 | 3778 | 1.34 | 0.6 | 0.07 | 2.7374971974973E-180 | 9.2237230572474E-176 |
| 72 | 5 | ICb | Interstitial cells b | wk11 | TPM2 | 7169 | 12011 | 1.33 | 0.73 | 0.2 | 1.2102195573998E-126 | 4.0777137767029E-122 |
| 72 | 5 | ICb | Interstitial cells b | wk11 | CALD1 | 800 | 1441 | 1.28 | 0.84 | 0.52 | 8.5217768399016E-83 | 2.8713274884364E-78 |
| 72 | 5 | ICb | Interstitial cells b | wk11 | PCDH18 | 54510 | 14268 | 1.27 | 0.62 | 0.09 | 3.230971263444E-168 | 1.0886434575048E-163 |
| 72 | 5 | ICb | Interstitial cells b | wk11 | COL21A1 | 81578 | 17025 | 1.27 | 0.48 | 0.02 | 1.8242012129655E-252 | 6.1464635669661E-248 |
| 72 | 5 | ICb | Interstitial cells b | wk11 | ZEB2 | 9839 | 14881 | 1.26 | 0.68 | 0.16 | 1.742800786912E-131 | 5.8721929714213E-127 |
| 72 | 5 | ICb | Interstitial cells b | wk11 | NTM | 50863 | 17941 | 1.24 | 0.48 | 0.05 | 7.5540793233045E-174 | 2.5452714871942E-169 |
| 72 | 5 | ICb | Interstitial cells b | wk11 | SYT1 | 6857 | 11509 | 1.24 | 0.62 | 0.1 | 8.6232607403473E-162 | 2.9055214738526E-157 |
| 72 | 5 | ICb | Interstitial cells b | wk11 | FLRT2 | 23768 | 3761 | 1.22 | 0.58 | 0.08 | 1.9357592261449E-169 | 6.5223471365726E-165 |
| 72 | 5 | ICb | Interstitial cells b | wk11 | EDNRB | 1910 | 3180 | 1.22 | 0.48 | 0.03 | 1.5787250392374E-229 | 5.3193561472064E-225 |
| 72 | 5 | ICb | Interstitial cells b | wk11 | SNAI2 | 6591 | 11094 | 1.22 | 0.61 | 0.12 | 1.0931272172283E-131 | 3.6831828457291E-127 |
| 72 | 5 | ICb | Interstitial cells b | wk11 | ALDH1A2 | 8854 | 15472 | 1.19 | 0.67 | 0.28 | 5.4170626165401E-76 | 1.825225078017E-71 |
| 72 | 5 | ICb | Interstitial cells b | wk11 | ACTA2 | 59 | 130 | 1.15 | 0.23 | 0.04 | 1.5895298109481E-41 | 5.3557617450086E-37 |
| 72 | 5 | ICb | Interstitial cells b | wk11 | EMCN | 51705 | 16041 | 1.13 | 0.48 | 0.03 | 5.6318465629049E-216 | 1.8975943809052E-211 |
| 72 | 5 | ICb | Interstitial cells b | wk11 | COL6A2 | 1292 | 2212 | 1.12 | 0.57 | 0.1 | 1.9087916299086E-132 | 6.4314825178142E-128 |
| 72 | 5 | ICb | Interstitial cells b | wk11 | MDFI | 4188 | 6967 | 1.1 | 0.55 | 0.11 | 1.3573388071581E-109 | 4.5734173768385E-105 |
| 72 | 5 | ICb | Interstitial cells b | wk11 | LRRC17 | 10234 | 16895 | 1.07 | 0.43 | 0.03 | 6.7472680120802E-198 | 2.2734244839903E-193 |
| 72 | 5 | ICb | Interstitial cells b | wk11 | AGTR2 | 186 | 338 | 1.07 | 0.38 | 0.01 | 6.8358390772556E-254 | 2.3032676186905E-249 |
| 72 | 5 | ICb | Interstitial cells b | wk11 | MARCKS | 4082 | 6759 | 1.06 | 0.94 | 0.65 | 1.9009350149927E-90 | 6.4050104395163E-86 |
| 72 | 5 | ICb | Interstitial cells b | wk11 | CPED1 | 79974 | 26159 | 1.06 | 0.41 | 0.03 | 3.7227312584045E-159 | 1.2543370702068E-154 |
| 72 | 5 | ICb | Interstitial cells b | wk11 | ALCAM | 214 | 400 | 1.04 | 0.64 | 0.28 | 1.9236381993834E-62 | 6.4815065490023E-58 |
| 72 | 5 | ICb | Interstitial cells b | wk11 | COL5A1 | 1289 | 2209 | 1.02 | 0.41 | 0.04 | 2.5461627693427E-142 | 8.5790408350234E-138 |
| 72 | 5 | ICb | Interstitial cells b | wk11 | C7 | 730 | 1346 | 1 | 0.34 | 0.01 | 1.236622983905E-188 | 4.1666774819695E-184 |
| 72 | 5 | ICb | Interstitial cells b | wk11 | SERPINH1 | 871 | 1546 | 1 | 0.93 | 0.66 | 5.0185863617553E-92 | 1.6909624887298E-87 |
| 72 | 5 | ICb | Interstitial cells b | wk11 | COL6A1 | 1291 | 2211 | 1 | 0.71 | 0.32 | 1.3075586857135E-74 | 4.4056882356431E-70 |
| 72 | 5 | ICb | Interstitial cells b | wk11 | CLMP | 79827 | 24039 | 0.99 | 0.41 | 0.06 | 2.4405024330269E-100 | 8.2230288978408E-96 |
| 72 | 5 | ICb | Interstitial cells b | wk11 | IGFBP7 | 3490 | 5476 | 0.96 | 0.91 | 0.45 | 1.2387011765928E-87 | 4.1736797444117E-83 |
| 72 | 5 | ICb | Interstitial cells b | wk11 | ITM2A | 9452 | 6173 | 0.96 | 0.19 | 0.03 | 2.5294974531974E-40 | 8.5228887188035E-36 |
| 72 | 5 | ICb | Interstitial cells b | wk11 | LDB2 | 9079 | 6533 | 0.96 | 0.37 | 0.05 | 3.6355765894895E-106 | 1.2249711760626E-101 |
| 72 | 5 | ICb | Interstitial cells b | wk11 | COL4A1 | 1282 | 2202 | 0.95 | 0.58 | 0.27 | 3.8818108637699E-50 | 1.3079373524386E-45 |
| 72 | 5 | ICb | Interstitial cells b | wk11 | PTN | 5764 | 9630 | 0.95 | 0.61 | 0.36 | 1.0110169817755E-35 | 3.4065206183944E-31 |
| 72 | 5 | ICb | Interstitial cells b | wk11 | FBN2 | 2201 | 3604 | 0.94 | 0.45 | 0.07 | 2.6313697761143E-112 | 8.8661373236396E-108 |
| 72 | 5 | ICb | Interstitial cells b | wk11 | TAGLN | 6876 | 11553 | 0.94 | 0.28 | 0.05 | 1.7469148457706E-55 | 5.8860548813394E-51 |
| 72 | 5 | ICb | Interstitial cells b | wk11 | CDH11 | 1009 | 1750 | 0.94 | 0.57 | 0.22 | 2.2140679613526E-58 | 7.4600805889813E-54 |
| 72 | 5 | ICb | Interstitial cells b | wk11 | PLAC9 | 219348 | 19255 | 0.93 | 0.36 | 0.01 | 2.9921714164341E-198 | 1.0081822370533E-193 |
| 72 | 5 | ICb | Interstitial cells b | wk11 | PCDH9 | 5101 | 8661 | 0.92 | 0.49 | 0.18 | 1.0633286920357E-49 | 3.5827796949449E-45 |
| 72 | 5 | ICb | Interstitial cells b | wk11 | POSTN | 10631 | 16953 | 0.92 | 0.15 | 0.05 | 1.9626638117443E-13 | 6.6129994472911E-9 |
| 72 | 5 | ICb | Interstitial cells b | wk11 | IGF2 | 3481 | 5466 | 0.92 | 0.92 | 0.53 | 9.0299509261081E-72 | 3.0425516650429E-67 |
| 72 | 5 | ICb | Interstitial cells b | wk11 | SYNPO2 | 171024 | 17732 | 0.91 | 0.31 | 0.01 | 4.3691444017045E-195 | 1.4721395147103E-190 |
| 72 | 5 | ICb | Interstitial cells b | wk11 | MYLK | 4638 | 7590 | 0.9 | 0.46 | 0.12 | 8.8432313800991E-68 | 2.9796383812106E-63 |
| 72 | 5 | ICb | Interstitial cells b | wk11 | APCDD1 | 147495 | 15718 | 0.9 | 0.26 | 0.02 | 3.983457675349E-103 | 1.3421862291321E-98 |
| 72 | 5 | ICb | Interstitial cells b | wk11 | ANGPT1 | 284 | 484 | 0.89 | 0.34 | 0.04 | 6.1170077068539E-93 | 2.0610645767474E-88 |
| 72 | 5 | ICb | Interstitial cells b | wk11 | S1PR3 | 1903 | 3167 | 0.89 | 0.35 | 0.03 | 1.8077008326221E-125 | 6.0908671854369E-121 |
| 72 | 5 | ICb | Interstitial cells b | wk11 | TSHZ2 | 128553 | 13010 | 0.89 | 0.41 | 0.12 | 5.7924126747085E-53 | 1.9516955266163E-48 |
| 72 | 5 | ICb | Interstitial cells b | wk11 | LMO4 | 8543 | 6644 | 0.89 | 0.5 | 0.33 | 6.0410519102347E-24 | 2.0354720306345E-19 |
| 72 | 5 | ICb | Interstitial cells b | wk11 | NRP1 | 8829 | 8004 | 0.88 | 0.47 | 0.17 | 1.4721854726591E-50 | 4.9603817315777E-46 |
| 72 | 5 | ICb | Interstitial cells b | wk11 | EDNRA | 1909 | 3179 | 0.87 | 0.35 | 0.06 | 5.1445037814339E-74 | 1.7333891041163E-69 |
| 72 | 5 | ICb | Interstitial cells b | wk11 | KCNQ1OT1 | 10984 | 6295 | 0.85 | 0.78 | 0.53 | 3.6966755005111E-47 | 1.2455578431422E-42 |
| 72 | 5 | ICb | Interstitial cells b | wk11 | TBX3 | 6926 | 11602 | 0.85 | 0.31 | 0.04 | 8.5878609290959E-86 | 2.8935938614496E-81 |
| 72 | 5 | ICb | Interstitial cells b | wk11 | NFIA | 4774 | 7784 | 0.84 | 0.33 | 0.04 | 8.7410320499155E-97 | 2.9452033388985E-92 |
| 72 | 5 | ICb | Interstitial cells b | wk11 | PLEKHA5 | 54477 | 30036 | 0.84 | 0.49 | 0.23 | 2.492018765877E-36 | 8.3966080297458E-32 |
| 72 | 5 | ICb | Interstitial cells b | wk11 | MEIS1 | 4211 | 7000 | 0.84 | 0.54 | 0.21 | 5.1331902343286E-50 | 1.7295771175547E-45 |
| 72 | 5 | ICb | Interstitial cells b | wk11 | FIBIN | 387758 | 33747 | 0.82 | 0.23 | 0.01 | 2.4864358579622E-107 | 8.377796979818E-103 |
| 72 | 5 | ICb | Interstitial cells b | wk11 | WLS | 79971 | 30238 | 0.82 | 0.37 | 0.08 | 4.6001311667545E-64 | 1.5499681953263E-59 |
| 72 | 5 | ICb | Interstitial cells b | wk11 | RBP1 | 5947 | 9919 | 0.82 | 0.88 | 0.54 | 2.0735929985063E-63 | 6.9867642491672E-59 |
| 72 | 5 | ICb | Interstitial cells b | wk11 | NCAM1 | 4684 | 7656 | 0.82 | 0.45 | 0.17 | 2.9485792208035E-41 | 9.9349428265754E-37 |
| 72 | 5 | ICb | Interstitial cells b | wk11 | CHST2 | 9435 | 1970 | 0.81 | 0.34 | 0.09 | 3.3724596851298E-49 | 1.1363165663076E-44 |
| 72 | 5 | ICb | Interstitial cells b | wk11 | CCN1 | 3491 | 2654 | 0.8 | 0.76 | 0.6 | 1.9475085571487E-29 | 6.5619353324568E-25 |
| 72 | 5 | ICb | Interstitial cells b | wk11 | OAF | 220323 | 28752 | 0.79 | 0.35 | 0.07 | 4.8934414941732E-65 | 1.6487961770467E-60 |
| 72 | 5 | ICb | Interstitial cells b | wk11 | VCAN | 1462 | 2464 | 0.78 | 0.72 | 0.43 | 1.9739551993284E-42 | 6.6510446486171E-38 |
| 72 | 5 | ICb | Interstitial cells b | wk11 | COL16A1 | 1307 | 2193 | 0.77 | 0.27 | 0.01 | 6.5422923639386E-139 | 2.2043599891055E-134 |
| 72 | 5 | ICb | Interstitial cells b | wk11 | SH3BGRL | 6451 | 10823 | 0.77 | 0.66 | 0.5 | 1.4435749394866E-33 | 4.8639814011063E-29 |
| 72 | 5 | ICb | Interstitial cells b | wk11 | THY1 | 7070 | 11801 | 0.76 | 0.31 | 0.05 | 1.8060998734572E-62 | 6.0854729136267E-58 |
| 72 | 5 | ICb | Interstitial cells b | wk11 | CHODL | 140578 | 17807 | 0.76 | 0.16 | 0.01 | 6.7528099783596E-74 | 2.2752917941085E-69 |
| 72 | 5 | ICb | Interstitial cells b | wk11 | SERPINE2 | 5270 | 8951 | 0.75 | 0.48 | 0.26 | 4.9091179331632E-28 | 1.6540781964E-23 |
| 72 | 5 | ICb | Interstitial cells b | wk11 | SLC40A1 | 30061 | 10909 | 0.75 | 0.37 | 0.14 | 1.0860824125667E-32 | 3.6594460809021E-28 |
| 72 | 5 | ICb | Interstitial cells b | wk11 | FST | 10468 | 3971 | 0.75 | 0.27 | 0.04 | 3.0832164601644E-60 | 1.0388589540878E-55 |