Marker Genes
Dataset: Single-cell transcriptomics reveals gene expression dynamics of human fetal kidney development
- tissue: Kidney
- ontology: Kidney
- genotype: -
- stage: Fetal
- treatment condition: WT
- cell/nucleus: Cells
- pmid: 30789893
- subset name: wk11
- total genes: Not reported
- clustering: scran
- pseudotime: Monocle 2
- link: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE114530
Rows:100
dataset id | cluster id | cluster name | cell type name | sample id | gene symbol | entrez geneid | species specific geneid |
avg log fc (?)
|
pct 1 | pct 2 | p value | padj |
---|---|---|---|---|---|---|---|---|---|---|---|---|
72 | 4 | ICa | Interstitial cells a | wk11 | COL1A1 | 1277 | 2197 | 1.89 | 0.95 | 0.25 | 4.51223565706606e-89 | 1.52035268229184e-84 |
72 | 4 | ICa | Interstitial cells a | wk11 | LGALS1 | 3956 | 6561 | 1.86 | 0.93 | 0.14 | 1.72842834946929e-127 | 5.82376648070184e-123 |
72 | 4 | ICa | Interstitial cells a | wk11 | COL1A2 | 1278 | 2198 | 1.79 | 0.94 | 0.22 | 3.00406611925917e-94 | 1.01219003822318e-89 |
72 | 4 | ICa | Interstitial cells a | wk11 | TPM2 | 7169 | 12011 | 1.57 | 0.89 | 0.21 | 6.42074910385399e-89 | 2.16340720305256e-84 |
72 | 4 | ICa | Interstitial cells a | wk11 | CLDN11 | 5010 | 8514 | 1.54 | 0.67 | 0.09 | 2.74466224908138e-97 | 9.24786498205482e-93 |
72 | 4 | ICa | Interstitial cells a | wk11 | COL3A1 | 1281 | 2201 | 1.51 | 0.94 | 0.43 | 1.30039653760027e-56 | 4.38155609379034e-52 |
72 | 4 | ICa | Interstitial cells a | wk11 | MFAP4 | 4239 | 7035 | 1.46 | 0.73 | 0.14 | 2.50731391598112e-74 | 8.44814350850677e-70 |
72 | 4 | ICa | Interstitial cells a | wk11 | SULT1E1 | 6783 | 11377 | 1.45 | 0.75 | 0.12 | 4.08454538678376e-89 | 1.37624672262292e-84 |
72 | 4 | ICa | Interstitial cells a | wk11 | PCOLCE | 5118 | 8738 | 1.41 | 0.78 | 0.09 | 4.23210345288438e-131 | 1.42596493741486e-126 |
72 | 4 | ICa | Interstitial cells a | wk11 | TNC | 3371 | 5318 | 1.41 | 0.72 | 0.07 | 1.57808321384625e-135 | 5.31719358073356e-131 |
72 | 4 | ICa | Interstitial cells a | wk11 | OLFML3 | 56944 | 24956 | 1.35 | 0.74 | 0.08 | 7.82975090432786e-127 | 2.63815626970423e-122 |
72 | 4 | ICa | Interstitial cells a | wk11 | MEG3 | 55384 | 14575 | 1.29 | 0.83 | 0.16 | 5.61261620126656e-82 | 1.89111490285476e-77 |
72 | 4 | ICa | Interstitial cells a | wk11 | IGF2 | 3481 | 5466 | 1.26 | 0.94 | 0.54 | 2.8744913339373e-44 | 9.68531110056833e-40 |
72 | 4 | ICa | Interstitial cells a | wk11 | TGFBI | 7045 | 11771 | 1.26 | 0.7 | 0.07 | 4.53463847984921e-122 | 1.52790108940039e-117 |
72 | 4 | ICa | Interstitial cells a | wk11 | IGFBP5 | 3488 | 5474 | 1.24 | 0.67 | 0.11 | 3.8672771571867e-79 | 1.30304036534249e-74 |
72 | 4 | ICa | Interstitial cells a | wk11 | FBLN5 | 10516 | 3602 | 1.24 | 0.57 | 0.06 | 1.0444487728266e-97 | 3.51916569516195e-93 |
72 | 4 | ICa | Interstitial cells a | wk11 | CALD1 | 800 | 1441 | 1.22 | 0.91 | 0.53 | 9.31632005589646e-39 | 3.13904087963375e-34 |
72 | 4 | ICa | Interstitial cells a | wk11 | ACTA2 | 59 | 130 | 1.21 | 0.35 | 0.05 | 6.27327168478858e-46 | 2.11371616147266e-41 |
72 | 4 | ICa | Interstitial cells a | wk11 | EMILIN1 | 11117 | 19880 | 1.2 | 0.74 | 0.14 | 1.73905937311806e-77 | 5.85958665178397e-73 |
72 | 4 | ICa | Interstitial cells a | wk11 | FN1 | 2335 | 3778 | 1.2 | 0.49 | 0.1 | 8.41239579488266e-45 | 2.83447263912776e-40 |
72 | 4 | ICa | Interstitial cells a | wk11 | COL6A3 | 1293 | 2213 | 1.19 | 0.75 | 0.1 | 1.58000088931257e-103 | 5.32365499644978e-99 |
72 | 4 | ICa | Interstitial cells a | wk11 | TAGLN | 6876 | 11553 | 1.16 | 0.49 | 0.05 | 4.80248453215035e-80 | 1.61814913826274e-75 |
72 | 4 | ICa | Interstitial cells a | wk11 | PRSS23 | 11098 | 14370 | 1.15 | 0.56 | 0.1 | 4.00914942889721e-58 | 1.35084280857263e-53 |
72 | 4 | ICa | Interstitial cells a | wk11 | CTSC | 1075 | 2528 | 1.14 | 0.82 | 0.25 | 1.01491468839093e-55 | 3.41965355106439e-51 |
72 | 4 | ICa | Interstitial cells a | wk11 | DCN | 1634 | 2705 | 1.12 | 0.55 | 0.11 | 4.99969705705628e-49 | 1.68459792640454e-44 |
72 | 4 | ICa | Interstitial cells a | wk11 | B2M | 567 | 914 | 1.09 | 0.97 | 0.63 | 3.99588489240003e-49 | 1.34637345564527e-44 |
72 | 4 | ICa | Interstitial cells a | wk11 | ZFP36 | 7538 | 12862 | 1.07 | 0.53 | 0.19 | 3.29783474822999e-25 | 1.11117244006861e-20 |
72 | 4 | ICa | Interstitial cells a | wk11 | PTN | 5764 | 9630 | 1.06 | 0.72 | 0.36 | 1.58951892883664e-25 | 5.35572507882217e-21 |
72 | 4 | ICa | Interstitial cells a | wk11 | EMCN | 51705 | 16041 | 1.04 | 0.57 | 0.04 | 3.29417978920374e-125 | 1.10994093817431e-120 |
72 | 4 | ICa | Interstitial cells a | wk11 | SNAI2 | 6591 | 11094 | 0.98 | 0.61 | 0.13 | 1.04160674478308e-49 | 3.50958976587211e-45 |
72 | 4 | ICa | Interstitial cells a | wk11 | COL5A2 | 1290 | 2210 | 0.98 | 0.57 | 0.07 | 5.02079553094108e-81 | 1.69170684619529e-76 |
72 | 4 | ICa | Interstitial cells a | wk11 | ALDH1A2 | 8854 | 15472 | 0.98 | 0.65 | 0.3 | 1.86859139524523e-26 | 6.29603184713929e-22 |
72 | 4 | ICa | Interstitial cells a | wk11 | MDFI | 4188 | 6967 | 0.97 | 0.62 | 0.13 | 6.2715669712075e-57 | 2.11314177527866e-52 |
72 | 4 | ICa | Interstitial cells a | wk11 | RBP1 | 5947 | 9919 | 0.97 | 0.97 | 0.55 | 2.57018493406292e-41 | 8.65998111683159e-37 |
72 | 4 | ICa | Interstitial cells a | wk11 | EDNRA | 1909 | 3179 | 0.96 | 0.51 | 0.07 | 1.0068951488282e-72 | 3.39263251446174e-68 |
72 | 4 | ICa | Interstitial cells a | wk11 | CNN2 | 1265 | 2156 | 0.94 | 0.78 | 0.41 | 2.85077528236049e-28 | 9.60540223638542e-24 |
72 | 4 | ICa | Interstitial cells a | wk11 | ALX1 | 8092 | 1494 | 0.93 | 0.45 | 0.04 | 1.26245150754988e-82 | 4.25370410953857e-78 |
72 | 4 | ICa | Interstitial cells a | wk11 | COL21A1 | 81578 | 17025 | 0.93 | 0.45 | 0.04 | 1.73724007708245e-88 | 5.85345671572162e-84 |
72 | 4 | ICa | Interstitial cells a | wk11 | MOXD1 | 26002 | 21063 | 0.93 | 0.54 | 0.07 | 5.41020994767192e-67 | 1.82291613976858e-62 |
72 | 4 | ICa | Interstitial cells a | wk11 | PDGFRA | 5156 | 8803 | 0.93 | 0.5 | 0.05 | 1.67383790661328e-81 | 5.63982944254278e-77 |
72 | 4 | ICa | Interstitial cells a | wk11 | CPED1 | 79974 | 26159 | 0.93 | 0.49 | 0.04 | 1.55292264487277e-93 | 5.23241755963432e-89 |
72 | 4 | ICa | Interstitial cells a | wk11 | PLAT | 5327 | 9051 | 0.91 | 0.61 | 0.14 | 1.05160311446626e-45 | 3.54327153388261e-41 |
72 | 4 | ICa | Interstitial cells a | wk11 | MARCKS | 4082 | 6759 | 0.91 | 0.94 | 0.66 | 3.7399975358099e-35 | 1.26015476971579e-30 |
72 | 4 | ICa | Interstitial cells a | wk11 | LDB2 | 9079 | 6533 | 0.88 | 0.51 | 0.05 | 1.45414909297043e-84 | 4.89960995385456e-80 |
72 | 4 | ICa | Interstitial cells a | wk11 | FLRT2 | 23768 | 3761 | 0.88 | 0.5 | 0.1 | 1.96738557223898e-43 | 6.62890894710203e-39 |
72 | 4 | ICa | Interstitial cells a | wk11 | TPM4 | 7171 | 12013 | 0.88 | 0.77 | 0.41 | 1.73802727934387e-28 | 5.85610911502123e-24 |
72 | 4 | ICa | Interstitial cells a | wk11 | AKAP12 | 9590 | 370 | 0.87 | 0.71 | 0.33 | 1.44794038938455e-25 | 4.87869034799231e-21 |
72 | 4 | ICa | Interstitial cells a | wk11 | FGF7 | 2252 | 3685 | 0.87 | 0.37 | 0.02 | 1.23010166091666e-95 | 4.14470453629258e-91 |
72 | 4 | ICa | Interstitial cells a | wk11 | MMP2 | 4313 | 7166 | 0.86 | 0.52 | 0.08 | 6.62452081959482e-60 | 2.23206604495428e-55 |
72 | 4 | ICa | Interstitial cells a | wk11 | EDNRB | 1910 | 3180 | 0.85 | 0.4 | 0.04 | 2.12581132184319e-62 | 7.16270866781846e-58 |
72 | 4 | ICa | Interstitial cells a | wk11 | SERPINH1 | 871 | 1546 | 0.84 | 0.93 | 0.67 | 3.18231981776975e-37 | 1.07225083939934e-32 |
72 | 4 | ICa | Interstitial cells a | wk11 | PCDH18 | 54510 | 14268 | 0.84 | 0.52 | 0.11 | 3.04683659475044e-41 | 1.02660112223521e-36 |
72 | 4 | ICa | Interstitial cells a | wk11 | OGN | 4969 | 8126 | 0.84 | 0.33 | 0.03 | 9.08753151709137e-58 | 3.06195286936876e-53 |
72 | 4 | ICa | Interstitial cells a | wk11 | GUCY1A1 | 2982 | 4685 | 0.83 | 0.43 | 0.08 | 1.1824690652307e-37 | 3.98421126838832e-33 |
72 | 4 | ICa | Interstitial cells a | wk11 | COL6A2 | 1292 | 2212 | 0.81 | 0.5 | 0.12 | 2.58545255440431e-37 | 8.71142383680988e-33 |
72 | 4 | ICa | Interstitial cells a | wk11 | TMSB4X | 7114 | 11881 | 0.8 | 1 | 0.99 | 1.78103454582928e-35 | 6.00101779871718e-31 |
72 | 4 | ICa | Interstitial cells a | wk11 | FBLN1 | 2192 | 3600 | 0.8 | 0.59 | 0.38 | 2.75256272665452e-10 | 9.27448485118974e-06 |
72 | 4 | ICa | Interstitial cells a | wk11 | CPE | 1363 | 2303 | 0.79 | 0.42 | 0.21 | 2.70538007901046e-11 | 9.11550763821786e-07 |
72 | 4 | ICa | Interstitial cells a | wk11 | BASP1 | 10409 | 957 | 0.78 | 0.52 | 0.35 | 1.6385820267231e-10 | 5.52103828084083e-06 |
72 | 4 | ICa | Interstitial cells a | wk11 | COL4A1 | 1282 | 2202 | 0.78 | 0.63 | 0.28 | 9.38044533626316e-24 | 3.16064725160051e-19 |
72 | 4 | ICa | Interstitial cells a | wk11 | CCN1 | 3491 | 2654 | 0.77 | 0.84 | 0.6 | 5.85720986907746e-17 | 1.97352829328696e-12 |
72 | 4 | ICa | Interstitial cells a | wk11 | CCL2 | 6347 | 10618 | 0.77 | 0.2 | 0.01 | 2.11795339630878e-40 | 7.13623217352281e-36 |
72 | 4 | ICa | Interstitial cells a | wk11 | COL6A1 | 1291 | 2211 | 0.76 | 0.71 | 0.34 | 1.78733796836917e-26 | 6.02225655062307e-22 |
72 | 4 | ICa | Interstitial cells a | wk11 | C7 | 730 | 1346 | 0.76 | 0.34 | 0.02 | 1.68819342544657e-74 | 5.68819892769969e-70 |
72 | 4 | ICa | Interstitial cells a | wk11 | LRRC17 | 10234 | 16895 | 0.76 | 0.39 | 0.04 | 2.932957561081e-60 | 9.88230720630633e-56 |
72 | 4 | ICa | Interstitial cells a | wk11 | TPM1 | 7168 | 12010 | 0.75 | 0.82 | 0.52 | 1.6770941817106e-22 | 5.6508011358557e-18 |
72 | 4 | ICa | Interstitial cells a | wk11 | PCDH9 | 5101 | 8661 | 0.74 | 0.59 | 0.19 | 2.40876772375599e-29 | 8.11610196842342e-25 |
72 | 4 | ICa | Interstitial cells a | wk11 | ANGPT1 | 284 | 484 | 0.73 | 0.31 | 0.05 | 8.25185902894693e-31 | 2.78038138121338e-26 |
72 | 4 | ICa | Interstitial cells a | wk11 | ZEB2 | 9839 | 14881 | 0.72 | 0.56 | 0.18 | 8.93352907344729e-28 | 3.01006328600733e-23 |
72 | 4 | ICa | Interstitial cells a | wk11 | FBN2 | 2201 | 3604 | 0.72 | 0.41 | 0.08 | 1.8017119037664e-35 | 6.07068808855049e-31 |
72 | 4 | ICa | Interstitial cells a | wk11 | TGFB1I1 | 7041 | 11767 | 0.72 | 0.48 | 0.11 | 6.84121614000185e-34 | 2.30507936621222e-29 |
72 | 4 | ICa | Interstitial cells a | wk11 | CCDC80 | 151887 | 30649 | 0.72 | 0.59 | 0.25 | 9.00023006676285e-21 | 3.03253751869508e-16 |
72 | 4 | ICa | Interstitial cells a | wk11 | NFIA | 4774 | 7784 | 0.72 | 0.33 | 0.05 | 3.62131428263211e-38 | 1.22016563439006e-33 |
72 | 4 | ICa | Interstitial cells a | wk11 | FABP5 | 2171 | 3560 | 0.72 | 0.63 | 0.36 | 1.33675350543449e-15 | 4.50405726121098e-11 |
72 | 4 | ICa | Interstitial cells a | wk11 | PLK2 | 10769 | 19699 | 0.7 | 0.56 | 0.28 | 3.07106240143846e-15 | 1.03476376554067e-10 |
72 | 4 | ICa | Interstitial cells a | wk11 | FIBIN | 387758 | 33747 | 0.7 | 0.24 | 0.02 | 3.34059857440047e-46 | 1.1255812836585e-41 |
72 | 4 | ICa | Interstitial cells a | wk11 | POSTN | 10631 | 16953 | 0.69 | 0.25 | 0.05 | 1.58226711864103e-21 | 5.33129082954908e-17 |
72 | 4 | ICa | Interstitial cells a | wk11 | LIMA1 | 51474 | 24636 | 0.68 | 0.44 | 0.12 | 7.02928642476535e-29 | 2.36844776796044e-24 |
72 | 4 | ICa | Interstitial cells a | wk11 | AGTR1 | 185 | 336 | 0.67 | 0.28 | 0.01 | 4.86758724327651e-70 | 1.64008484574959e-65 |
72 | 4 | ICa | Interstitial cells a | wk11 | JUNB | 3726 | 6205 | 0.67 | 0.68 | 0.5 | 9.50466045214664e-12 | 3.20250029274629e-07 |
72 | 4 | ICa | Interstitial cells a | wk11 | COL12A1 | 1303 | 2188 | 0.66 | 0.33 | 0.03 | 5.47635152789745e-59 | 1.84520188380977e-54 |
72 | 4 | ICa | Interstitial cells a | wk11 | MATN2 | 4147 | 6908 | 0.66 | 0.26 | 0.03 | 5.16168558734781e-33 | 1.73917834180097e-28 |
72 | 4 | ICa | Interstitial cells a | wk11 | NFIB | 4781 | 7785 | 0.66 | 0.37 | 0.06 | 2.84813614030489e-38 | 9.59650991114329e-34 |
72 | 4 | ICa | Interstitial cells a | wk11 | MYLK | 4638 | 7590 | 0.66 | 0.37 | 0.14 | 6.28796243078246e-14 | 2.11866606142784e-09 |
72 | 4 | ICa | Interstitial cells a | wk11 | PLAC9 | 219348 | 19255 | 0.65 | 0.27 | 0.03 | 2.3745007807077e-42 | 8.00064293051652e-38 |
72 | 4 | ICa | Interstitial cells a | wk11 | SYT1 | 6857 | 11509 | 0.65 | 0.45 | 0.12 | 6.63279120836491e-27 | 2.23485266974647e-22 |
72 | 4 | ICa | Interstitial cells a | wk11 | CNN3 | 1266 | 2157 | 0.65 | 0.76 | 0.54 | 1.28659570289584e-16 | 4.33505556133725e-12 |
72 | 4 | ICa | Interstitial cells a | wk11 | RPS12 | 6206 | 10385 | 0.65 | 1 | 0.96 | 7.73937150204213e-39 | 2.60770383389808e-34 |
72 | 4 | ICa | Interstitial cells a | wk11 | NENF | 29937 | 30384 | 0.65 | 0.56 | 0.24 | 2.22140013210996e-21 | 7.48478560513132e-17 |
72 | 4 | ICa | Interstitial cells a | wk11 | ATP2B1 | 490 | 814 | 0.64 | 0.75 | 0.51 | 4.0870841792592e-17 | 1.37710214335959e-12 |
72 | 4 | ICa | Interstitial cells a | wk11 | CDH11 | 1009 | 1750 | 0.64 | 0.55 | 0.23 | 1.15936583869795e-17 | 3.90636725690887e-13 |
72 | 4 | ICa | Interstitial cells a | wk11 | IFITM3 | 10410 | 5414 | 0.64 | 0.89 | 0.67 | 8.2798767999186e-20 | 2.78982168896457e-15 |
72 | 4 | ICa | Interstitial cells a | wk11 | MYH10 | 4628 | 7568 | 0.63 | 0.65 | 0.37 | 5.63536615357885e-15 | 1.89878027178686e-10 |
72 | 4 | ICa | Interstitial cells a | wk11 | GNG2 | 54331 | 4404 | 0.63 | 0.33 | 0.04 | 1.99308634550007e-43 | 6.71550513252793e-39 |
72 | 4 | ICa | Interstitial cells a | wk11 | RPS18 | 6222 | 10401 | 0.63 | 1 | 0.99 | 1.28544115045452e-41 | 4.33116541234145e-37 |
72 | 4 | ICa | Interstitial cells a | wk11 | RPL24 | 6152 | 10325 | 0.63 | 1 | 0.96 | 1.09699581512036e-36 | 3.69621769946654e-32 |
72 | 4 | ICa | Interstitial cells a | wk11 | BGN | 633 | 1044 | 0.63 | 0.65 | 0.28 | 8.06397605762836e-19 | 2.7170760928573e-14 |
72 | 4 | ICa | Interstitial cells a | wk11 | COL9A3 | 1299 | 2219 | 0.63 | 0.22 | 0.04 | 3.84063284027009e-17 | 1.2940628292006e-12 |
72 | 4 | ICa | Interstitial cells a | wk11 | C12orf57 | 113246 | 29521 | 0.62 | 0.66 | 0.4 | 2.69064136802384e-16 | 9.06584702541952e-12 |
72 | 4 | ICa | Interstitial cells a | wk11 | RPL36A | 6173 | 10359 | 0.62 | 0.91 | 0.79 | 5.39616927278893e-19 | 1.8181852747735e-14 |