Marker Genes
Dataset: Single-cell transcriptomics reveals gene expression dynamics of human fetal kidney development
- tissue: Kidney
- ontology: Kidney
- genotype: -
- stage: Fetal
- treatment condition: WT
- cell/nucleus: Cells
- pmid: 30789893
- subset name: wk11
- total genes: Not reported
- clustering: scran
- pseudotime: Monocle 2
- link: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE114530
Rows:100
| dataset id | cluster id | cluster name | cell type name | sample id | gene symbol | entrez geneid | species specific geneid |
avg log fc (?)
|
pct 1 | pct 2 | p value | padj |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 72 | 4 | ICa | Interstitial cells a | wk11 | COL1A1 | 1277 | 2197 | 1.89 | 0.95 | 0.25 | 4.5122356570661E-89 | 1.5203526822918E-84 |
| 72 | 4 | ICa | Interstitial cells a | wk11 | LGALS1 | 3956 | 6561 | 1.86 | 0.93 | 0.14 | 1.7284283494693E-127 | 5.8237664807018E-123 |
| 72 | 4 | ICa | Interstitial cells a | wk11 | COL1A2 | 1278 | 2198 | 1.79 | 0.94 | 0.22 | 3.0040661192592E-94 | 1.0121900382232E-89 |
| 72 | 4 | ICa | Interstitial cells a | wk11 | TPM2 | 7169 | 12011 | 1.57 | 0.89 | 0.21 | 6.420749103854E-89 | 2.1634072030526E-84 |
| 72 | 4 | ICa | Interstitial cells a | wk11 | CLDN11 | 5010 | 8514 | 1.54 | 0.67 | 0.09 | 2.7446622490814E-97 | 9.2478649820548E-93 |
| 72 | 4 | ICa | Interstitial cells a | wk11 | COL3A1 | 1281 | 2201 | 1.51 | 0.94 | 0.43 | 1.3003965376003E-56 | 4.3815560937903E-52 |
| 72 | 4 | ICa | Interstitial cells a | wk11 | MFAP4 | 4239 | 7035 | 1.46 | 0.73 | 0.14 | 2.5073139159811E-74 | 8.4481435085068E-70 |
| 72 | 4 | ICa | Interstitial cells a | wk11 | SULT1E1 | 6783 | 11377 | 1.45 | 0.75 | 0.12 | 4.0845453867838E-89 | 1.3762467226229E-84 |
| 72 | 4 | ICa | Interstitial cells a | wk11 | PCOLCE | 5118 | 8738 | 1.41 | 0.78 | 0.09 | 4.2321034528844E-131 | 1.4259649374149E-126 |
| 72 | 4 | ICa | Interstitial cells a | wk11 | TNC | 3371 | 5318 | 1.41 | 0.72 | 0.07 | 1.5780832138463E-135 | 5.3171935807336E-131 |
| 72 | 4 | ICa | Interstitial cells a | wk11 | OLFML3 | 56944 | 24956 | 1.35 | 0.74 | 0.08 | 7.8297509043279E-127 | 2.6381562697042E-122 |
| 72 | 4 | ICa | Interstitial cells a | wk11 | MEG3 | 55384 | 14575 | 1.29 | 0.83 | 0.16 | 5.6126162012666E-82 | 1.8911149028548E-77 |
| 72 | 4 | ICa | Interstitial cells a | wk11 | IGF2 | 3481 | 5466 | 1.26 | 0.94 | 0.54 | 2.8744913339373E-44 | 9.6853111005683E-40 |
| 72 | 4 | ICa | Interstitial cells a | wk11 | TGFBI | 7045 | 11771 | 1.26 | 0.7 | 0.07 | 4.5346384798492E-122 | 1.5279010894004E-117 |
| 72 | 4 | ICa | Interstitial cells a | wk11 | IGFBP5 | 3488 | 5474 | 1.24 | 0.67 | 0.11 | 3.8672771571867E-79 | 1.3030403653425E-74 |
| 72 | 4 | ICa | Interstitial cells a | wk11 | FBLN5 | 10516 | 3602 | 1.24 | 0.57 | 0.06 | 1.0444487728266E-97 | 3.5191656951619E-93 |
| 72 | 4 | ICa | Interstitial cells a | wk11 | CALD1 | 800 | 1441 | 1.22 | 0.91 | 0.53 | 9.3163200558965E-39 | 3.1390408796337E-34 |
| 72 | 4 | ICa | Interstitial cells a | wk11 | ACTA2 | 59 | 130 | 1.21 | 0.35 | 0.05 | 6.2732716847886E-46 | 2.1137161614727E-41 |
| 72 | 4 | ICa | Interstitial cells a | wk11 | EMILIN1 | 11117 | 19880 | 1.2 | 0.74 | 0.14 | 1.7390593731181E-77 | 5.859586651784E-73 |
| 72 | 4 | ICa | Interstitial cells a | wk11 | FN1 | 2335 | 3778 | 1.2 | 0.49 | 0.1 | 8.4123957948827E-45 | 2.8344726391278E-40 |
| 72 | 4 | ICa | Interstitial cells a | wk11 | COL6A3 | 1293 | 2213 | 1.19 | 0.75 | 0.1 | 1.5800008893126E-103 | 5.3236549964498E-99 |
| 72 | 4 | ICa | Interstitial cells a | wk11 | TAGLN | 6876 | 11553 | 1.16 | 0.49 | 0.05 | 4.8024845321504E-80 | 1.6181491382627E-75 |
| 72 | 4 | ICa | Interstitial cells a | wk11 | PRSS23 | 11098 | 14370 | 1.15 | 0.56 | 0.1 | 4.0091494288972E-58 | 1.3508428085726E-53 |
| 72 | 4 | ICa | Interstitial cells a | wk11 | CTSC | 1075 | 2528 | 1.14 | 0.82 | 0.25 | 1.0149146883909E-55 | 3.4196535510644E-51 |
| 72 | 4 | ICa | Interstitial cells a | wk11 | DCN | 1634 | 2705 | 1.12 | 0.55 | 0.11 | 4.9996970570563E-49 | 1.6845979264045E-44 |
| 72 | 4 | ICa | Interstitial cells a | wk11 | B2M | 567 | 914 | 1.09 | 0.97 | 0.63 | 3.9958848924E-49 | 1.3463734556453E-44 |
| 72 | 4 | ICa | Interstitial cells a | wk11 | ZFP36 | 7538 | 12862 | 1.07 | 0.53 | 0.19 | 3.29783474823E-25 | 1.1111724400686E-20 |
| 72 | 4 | ICa | Interstitial cells a | wk11 | PTN | 5764 | 9630 | 1.06 | 0.72 | 0.36 | 1.5895189288366E-25 | 5.3557250788222E-21 |
| 72 | 4 | ICa | Interstitial cells a | wk11 | EMCN | 51705 | 16041 | 1.04 | 0.57 | 0.04 | 3.2941797892037E-125 | 1.1099409381743E-120 |
| 72 | 4 | ICa | Interstitial cells a | wk11 | SNAI2 | 6591 | 11094 | 0.98 | 0.61 | 0.13 | 1.0416067447831E-49 | 3.5095897658721E-45 |
| 72 | 4 | ICa | Interstitial cells a | wk11 | COL5A2 | 1290 | 2210 | 0.98 | 0.57 | 0.07 | 5.0207955309411E-81 | 1.6917068461953E-76 |
| 72 | 4 | ICa | Interstitial cells a | wk11 | ALDH1A2 | 8854 | 15472 | 0.98 | 0.65 | 0.3 | 1.8685913952452E-26 | 6.2960318471393E-22 |
| 72 | 4 | ICa | Interstitial cells a | wk11 | MDFI | 4188 | 6967 | 0.97 | 0.62 | 0.13 | 6.2715669712075E-57 | 2.1131417752787E-52 |
| 72 | 4 | ICa | Interstitial cells a | wk11 | RBP1 | 5947 | 9919 | 0.97 | 0.97 | 0.55 | 2.5701849340629E-41 | 8.6599811168316E-37 |
| 72 | 4 | ICa | Interstitial cells a | wk11 | EDNRA | 1909 | 3179 | 0.96 | 0.51 | 0.07 | 1.0068951488282E-72 | 3.3926325144617E-68 |
| 72 | 4 | ICa | Interstitial cells a | wk11 | CNN2 | 1265 | 2156 | 0.94 | 0.78 | 0.41 | 2.8507752823605E-28 | 9.6054022363854E-24 |
| 72 | 4 | ICa | Interstitial cells a | wk11 | ALX1 | 8092 | 1494 | 0.93 | 0.45 | 0.04 | 1.2624515075499E-82 | 4.2537041095386E-78 |
| 72 | 4 | ICa | Interstitial cells a | wk11 | COL21A1 | 81578 | 17025 | 0.93 | 0.45 | 0.04 | 1.7372400770824E-88 | 5.8534567157216E-84 |
| 72 | 4 | ICa | Interstitial cells a | wk11 | MOXD1 | 26002 | 21063 | 0.93 | 0.54 | 0.07 | 5.4102099476719E-67 | 1.8229161397686E-62 |
| 72 | 4 | ICa | Interstitial cells a | wk11 | PDGFRA | 5156 | 8803 | 0.93 | 0.5 | 0.05 | 1.6738379066133E-81 | 5.6398294425428E-77 |
| 72 | 4 | ICa | Interstitial cells a | wk11 | CPED1 | 79974 | 26159 | 0.93 | 0.49 | 0.04 | 1.5529226448728E-93 | 5.2324175596343E-89 |
| 72 | 4 | ICa | Interstitial cells a | wk11 | PLAT | 5327 | 9051 | 0.91 | 0.61 | 0.14 | 1.0516031144663E-45 | 3.5432715338826E-41 |
| 72 | 4 | ICa | Interstitial cells a | wk11 | MARCKS | 4082 | 6759 | 0.91 | 0.94 | 0.66 | 3.7399975358099E-35 | 1.2601547697158E-30 |
| 72 | 4 | ICa | Interstitial cells a | wk11 | LDB2 | 9079 | 6533 | 0.88 | 0.51 | 0.05 | 1.4541490929704E-84 | 4.8996099538546E-80 |
| 72 | 4 | ICa | Interstitial cells a | wk11 | FLRT2 | 23768 | 3761 | 0.88 | 0.5 | 0.1 | 1.967385572239E-43 | 6.628908947102E-39 |
| 72 | 4 | ICa | Interstitial cells a | wk11 | TPM4 | 7171 | 12013 | 0.88 | 0.77 | 0.41 | 1.7380272793439E-28 | 5.8561091150212E-24 |
| 72 | 4 | ICa | Interstitial cells a | wk11 | AKAP12 | 9590 | 370 | 0.87 | 0.71 | 0.33 | 1.4479403893845E-25 | 4.8786903479923E-21 |
| 72 | 4 | ICa | Interstitial cells a | wk11 | FGF7 | 2252 | 3685 | 0.87 | 0.37 | 0.02 | 1.2301016609167E-95 | 4.1447045362926E-91 |
| 72 | 4 | ICa | Interstitial cells a | wk11 | MMP2 | 4313 | 7166 | 0.86 | 0.52 | 0.08 | 6.6245208195948E-60 | 2.2320660449543E-55 |
| 72 | 4 | ICa | Interstitial cells a | wk11 | EDNRB | 1910 | 3180 | 0.85 | 0.4 | 0.04 | 2.1258113218432E-62 | 7.1627086678185E-58 |
| 72 | 4 | ICa | Interstitial cells a | wk11 | SERPINH1 | 871 | 1546 | 0.84 | 0.93 | 0.67 | 3.1823198177697E-37 | 1.0722508393993E-32 |
| 72 | 4 | ICa | Interstitial cells a | wk11 | PCDH18 | 54510 | 14268 | 0.84 | 0.52 | 0.11 | 3.0468365947504E-41 | 1.0266011222352E-36 |
| 72 | 4 | ICa | Interstitial cells a | wk11 | OGN | 4969 | 8126 | 0.84 | 0.33 | 0.03 | 9.0875315170914E-58 | 3.0619528693688E-53 |
| 72 | 4 | ICa | Interstitial cells a | wk11 | GUCY1A1 | 2982 | 4685 | 0.83 | 0.43 | 0.08 | 1.1824690652307E-37 | 3.9842112683883E-33 |
| 72 | 4 | ICa | Interstitial cells a | wk11 | COL6A2 | 1292 | 2212 | 0.81 | 0.5 | 0.12 | 2.5854525544043E-37 | 8.7114238368099E-33 |
| 72 | 4 | ICa | Interstitial cells a | wk11 | TMSB4X | 7114 | 11881 | 0.8 | 1 | 0.99 | 1.7810345458293E-35 | 6.0010177987172E-31 |
| 72 | 4 | ICa | Interstitial cells a | wk11 | FBLN1 | 2192 | 3600 | 0.8 | 0.59 | 0.38 | 2.7525627266545E-10 | 9.2744848511897E-6 |
| 72 | 4 | ICa | Interstitial cells a | wk11 | CPE | 1363 | 2303 | 0.79 | 0.42 | 0.21 | 2.7053800790105E-11 | 9.1155076382179E-7 |
| 72 | 4 | ICa | Interstitial cells a | wk11 | BASP1 | 10409 | 957 | 0.78 | 0.52 | 0.35 | 1.6385820267231E-10 | 5.5210382808408E-6 |
| 72 | 4 | ICa | Interstitial cells a | wk11 | COL4A1 | 1282 | 2202 | 0.78 | 0.63 | 0.28 | 9.3804453362632E-24 | 3.1606472516005E-19 |
| 72 | 4 | ICa | Interstitial cells a | wk11 | CCN1 | 3491 | 2654 | 0.77 | 0.84 | 0.6 | 5.8572098690775E-17 | 1.973528293287E-12 |
| 72 | 4 | ICa | Interstitial cells a | wk11 | CCL2 | 6347 | 10618 | 0.77 | 0.2 | 0.01 | 2.1179533963088E-40 | 7.1362321735228E-36 |
| 72 | 4 | ICa | Interstitial cells a | wk11 | COL6A1 | 1291 | 2211 | 0.76 | 0.71 | 0.34 | 1.7873379683692E-26 | 6.0222565506231E-22 |
| 72 | 4 | ICa | Interstitial cells a | wk11 | C7 | 730 | 1346 | 0.76 | 0.34 | 0.02 | 1.6881934254466E-74 | 5.6881989276997E-70 |
| 72 | 4 | ICa | Interstitial cells a | wk11 | LRRC17 | 10234 | 16895 | 0.76 | 0.39 | 0.04 | 2.932957561081E-60 | 9.8823072063063E-56 |
| 72 | 4 | ICa | Interstitial cells a | wk11 | TPM1 | 7168 | 12010 | 0.75 | 0.82 | 0.52 | 1.6770941817106E-22 | 5.6508011358557E-18 |
| 72 | 4 | ICa | Interstitial cells a | wk11 | PCDH9 | 5101 | 8661 | 0.74 | 0.59 | 0.19 | 2.408767723756E-29 | 8.1161019684234E-25 |
| 72 | 4 | ICa | Interstitial cells a | wk11 | ANGPT1 | 284 | 484 | 0.73 | 0.31 | 0.05 | 8.2518590289469E-31 | 2.7803813812134E-26 |
| 72 | 4 | ICa | Interstitial cells a | wk11 | ZEB2 | 9839 | 14881 | 0.72 | 0.56 | 0.18 | 8.9335290734473E-28 | 3.0100632860073E-23 |
| 72 | 4 | ICa | Interstitial cells a | wk11 | FBN2 | 2201 | 3604 | 0.72 | 0.41 | 0.08 | 1.8017119037664E-35 | 6.0706880885505E-31 |
| 72 | 4 | ICa | Interstitial cells a | wk11 | TGFB1I1 | 7041 | 11767 | 0.72 | 0.48 | 0.11 | 6.8412161400019E-34 | 2.3050793662122E-29 |
| 72 | 4 | ICa | Interstitial cells a | wk11 | CCDC80 | 151887 | 30649 | 0.72 | 0.59 | 0.25 | 9.0002300667628E-21 | 3.0325375186951E-16 |
| 72 | 4 | ICa | Interstitial cells a | wk11 | NFIA | 4774 | 7784 | 0.72 | 0.33 | 0.05 | 3.6213142826321E-38 | 1.2201656343901E-33 |
| 72 | 4 | ICa | Interstitial cells a | wk11 | FABP5 | 2171 | 3560 | 0.72 | 0.63 | 0.36 | 1.3367535054345E-15 | 4.504057261211E-11 |
| 72 | 4 | ICa | Interstitial cells a | wk11 | PLK2 | 10769 | 19699 | 0.7 | 0.56 | 0.28 | 3.0710624014385E-15 | 1.0347637655407E-10 |
| 72 | 4 | ICa | Interstitial cells a | wk11 | FIBIN | 387758 | 33747 | 0.7 | 0.24 | 0.02 | 3.3405985744005E-46 | 1.1255812836585E-41 |
| 72 | 4 | ICa | Interstitial cells a | wk11 | POSTN | 10631 | 16953 | 0.69 | 0.25 | 0.05 | 1.582267118641E-21 | 5.3312908295491E-17 |
| 72 | 4 | ICa | Interstitial cells a | wk11 | LIMA1 | 51474 | 24636 | 0.68 | 0.44 | 0.12 | 7.0292864247654E-29 | 2.3684477679604E-24 |
| 72 | 4 | ICa | Interstitial cells a | wk11 | AGTR1 | 185 | 336 | 0.67 | 0.28 | 0.01 | 4.8675872432765E-70 | 1.6400848457496E-65 |
| 72 | 4 | ICa | Interstitial cells a | wk11 | JUNB | 3726 | 6205 | 0.67 | 0.68 | 0.5 | 9.5046604521466E-12 | 3.2025002927463E-7 |
| 72 | 4 | ICa | Interstitial cells a | wk11 | COL12A1 | 1303 | 2188 | 0.66 | 0.33 | 0.03 | 5.4763515278974E-59 | 1.8452018838098E-54 |
| 72 | 4 | ICa | Interstitial cells a | wk11 | MATN2 | 4147 | 6908 | 0.66 | 0.26 | 0.03 | 5.1616855873478E-33 | 1.739178341801E-28 |
| 72 | 4 | ICa | Interstitial cells a | wk11 | NFIB | 4781 | 7785 | 0.66 | 0.37 | 0.06 | 2.8481361403049E-38 | 9.5965099111433E-34 |
| 72 | 4 | ICa | Interstitial cells a | wk11 | MYLK | 4638 | 7590 | 0.66 | 0.37 | 0.14 | 6.2879624307825E-14 | 2.1186660614278E-9 |
| 72 | 4 | ICa | Interstitial cells a | wk11 | PLAC9 | 219348 | 19255 | 0.65 | 0.27 | 0.03 | 2.3745007807077E-42 | 8.0006429305165E-38 |
| 72 | 4 | ICa | Interstitial cells a | wk11 | SYT1 | 6857 | 11509 | 0.65 | 0.45 | 0.12 | 6.6327912083649E-27 | 2.2348526697465E-22 |
| 72 | 4 | ICa | Interstitial cells a | wk11 | CNN3 | 1266 | 2157 | 0.65 | 0.76 | 0.54 | 1.2865957028958E-16 | 4.3350555613373E-12 |
| 72 | 4 | ICa | Interstitial cells a | wk11 | RPS12 | 6206 | 10385 | 0.65 | 1 | 0.96 | 7.7393715020421E-39 | 2.6077038338981E-34 |
| 72 | 4 | ICa | Interstitial cells a | wk11 | NENF | 29937 | 30384 | 0.65 | 0.56 | 0.24 | 2.22140013211E-21 | 7.4847856051313E-17 |
| 72 | 4 | ICa | Interstitial cells a | wk11 | ATP2B1 | 490 | 814 | 0.64 | 0.75 | 0.51 | 4.0870841792592E-17 | 1.3771021433596E-12 |
| 72 | 4 | ICa | Interstitial cells a | wk11 | CDH11 | 1009 | 1750 | 0.64 | 0.55 | 0.23 | 1.159365838698E-17 | 3.9063672569089E-13 |
| 72 | 4 | ICa | Interstitial cells a | wk11 | IFITM3 | 10410 | 5414 | 0.64 | 0.89 | 0.67 | 8.2798767999186E-20 | 2.7898216889646E-15 |
| 72 | 4 | ICa | Interstitial cells a | wk11 | MYH10 | 4628 | 7568 | 0.63 | 0.65 | 0.37 | 5.6353661535789E-15 | 1.8987802717869E-10 |
| 72 | 4 | ICa | Interstitial cells a | wk11 | GNG2 | 54331 | 4404 | 0.63 | 0.33 | 0.04 | 1.9930863455001E-43 | 6.7155051325279E-39 |
| 72 | 4 | ICa | Interstitial cells a | wk11 | RPS18 | 6222 | 10401 | 0.63 | 1 | 0.99 | 1.2854411504545E-41 | 4.3311654123414E-37 |
| 72 | 4 | ICa | Interstitial cells a | wk11 | RPL24 | 6152 | 10325 | 0.63 | 1 | 0.96 | 1.0969958151204E-36 | 3.6962176994665E-32 |
| 72 | 4 | ICa | Interstitial cells a | wk11 | BGN | 633 | 1044 | 0.63 | 0.65 | 0.28 | 8.0639760576284E-19 | 2.7170760928573E-14 |
| 72 | 4 | ICa | Interstitial cells a | wk11 | COL9A3 | 1299 | 2219 | 0.63 | 0.22 | 0.04 | 3.8406328402701E-17 | 1.2940628292006E-12 |
| 72 | 4 | ICa | Interstitial cells a | wk11 | C12orf57 | 113246 | 29521 | 0.62 | 0.66 | 0.4 | 2.6906413680238E-16 | 9.0658470254195E-12 |
| 72 | 4 | ICa | Interstitial cells a | wk11 | RPL36A | 6173 | 10359 | 0.62 | 0.91 | 0.79 | 5.3961692727889E-19 | 1.8181852747735E-14 |