Marker Genes
Dataset: Single-cell transcriptomics reveals gene expression dynamics of human fetal kidney development
- tissue: Kidney
- ontology: Kidney
- genotype: -
- stage: Fetal
- treatment condition: WT
- cell/nucleus: Cells
- pmid: 30789893
- subset name: wk11
- total genes: Not reported
- clustering: scran
- pseudotime: Monocle 2
- link: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE114530
Rows:100
dataset id | cluster id | cluster name | cell type name | sample id | gene symbol | entrez geneid | species specific geneid |
avg log fc (?)
|
pct 1 | pct 2 | p value | padj |
---|---|---|---|---|---|---|---|---|---|---|---|---|
72 | 3 | ErPrT | Early proximal tubule | wk11 | APOE | 348 | 613 | 2.94 | 0.99 | 0.25 | 8.99247336543111e-270 | 3.02992397574836e-265 |
72 | 3 | ErPrT | Early proximal tubule | wk11 | SPP1 | 6696 | 11255 | 2.37 | 0.8 | 0.08 | 6.21410887921217e-305 | 2.09378184576175e-300 |
72 | 3 | ErPrT | Early proximal tubule | wk11 | APOM | 55937 | 13916 | 2.19 | 0.88 | 0.05 | 0 | 0 |
72 | 3 | ErPrT | Early proximal tubule | wk11 | LINC01781 | 101927412 | 52571 | 2.15 | 0.85 | 0.05 | 0 | 0 |
72 | 3 | ErPrT | Early proximal tubule | wk11 | SMIM24 | 284422 | 37244 | 2.1 | 0.95 | 0.06 | 0 | 0 |
72 | 3 | ErPrT | Early proximal tubule | wk11 | AFP | 174 | 317 | 2.03 | 0.88 | 0.02 | 0 | 0 |
72 | 3 | ErPrT | Early proximal tubule | wk11 | FTL | 2512 | 3999 | 2.02 | 1 | 0.96 | 4.04737630877906e-179 | 1.36372297348002e-174 |
72 | 3 | ErPrT | Early proximal tubule | wk11 | GLYATL1 | 92292 | 30519 | 1.82 | 0.78 | 0.04 | 0 | 0 |
72 | 3 | ErPrT | Early proximal tubule | wk11 | AMN | 81693 | 14604 | 1.79 | 0.89 | 0.03 | 0 | 0 |
72 | 3 | ErPrT | Early proximal tubule | wk11 | SLC5A8 | 160728 | 19119 | 1.72 | 0.74 | 0.02 | 0 | 0 |
72 | 3 | ErPrT | Early proximal tubule | wk11 | APOA1 | 335 | 600 | 1.67 | 0.54 | 0.02 | 0 | 0 |
72 | 3 | ErPrT | Early proximal tubule | wk11 | MPC2 | 25874 | 24515 | 1.65 | 0.99 | 0.45 | 8.18221753914207e-184 | 2.75691637763853e-179 |
72 | 3 | ErPrT | Early proximal tubule | wk11 | CUBN | 8029 | 2548 | 1.62 | 0.81 | 0.01 | 0 | 0 |
72 | 3 | ErPrT | Early proximal tubule | wk11 | RIDA | 10247 | 16897 | 1.6 | 0.92 | 0.2 | 7.57375390525897e-237 | 2.55190064083796e-232 |
72 | 3 | ErPrT | Early proximal tubule | wk11 | MSRB1 | 51734 | 14133 | 1.55 | 0.91 | 0.29 | 2.52201478796891e-175 | 8.49767662658244e-171 |
72 | 3 | ErPrT | Early proximal tubule | wk11 | FXYD2 | 486 | 4026 | 1.55 | 0.89 | 0.11 | 0 | 0 |
72 | 3 | ErPrT | Early proximal tubule | wk11 | PDZK1 | 5174 | 8821 | 1.54 | 0.82 | 0.06 | 0 | 0 |
72 | 3 | ErPrT | Early proximal tubule | wk11 | SLC3A1 | 6519 | 11025 | 1.43 | 0.76 | 0.04 | 0 | 0 |
72 | 3 | ErPrT | Early proximal tubule | wk11 | DSEL | 92126 | 18144 | 1.4 | 0.74 | 0.07 | 9.26488198293714e-299 | 3.12170933533084e-294 |
72 | 3 | ErPrT | Early proximal tubule | wk11 | DAB2 | 1601 | 2662 | 1.4 | 0.9 | 0.23 | 1.22689738557982e-193 | 4.13390805097265e-189 |
72 | 3 | ErPrT | Early proximal tubule | wk11 | CYBA | 1535 | 2577 | 1.38 | 0.96 | 0.49 | 1.19845886085311e-140 | 4.03808728575847e-136 |
72 | 3 | ErPrT | Early proximal tubule | wk11 | KCNJ15 | 3772 | 6261 | 1.31 | 0.71 | 0.07 | 4.73329969908575e-255 | 1.59483800060995e-250 |
72 | 3 | ErPrT | Early proximal tubule | wk11 | SERPINF1 | 5176 | 8824 | 1.29 | 0.77 | 0.2 | 8.94602486909984e-145 | 3.0142736193945e-140 |
72 | 3 | ErPrT | Early proximal tubule | wk11 | GATM | 2628 | 4175 | 1.29 | 0.64 | 0.04 | 0 | 0 |
72 | 3 | ErPrT | Early proximal tubule | wk11 | CARMIL1 | 55604 | 21581 | 1.27 | 0.78 | 0.09 | 1.95187007676926e-254 | 6.57663103666636e-250 |
72 | 3 | ErPrT | Early proximal tubule | wk11 | C1QTNF3 | 114899 | 14326 | 1.26 | 0.61 | 0.1 | 1.78000306533172e-145 | 5.99754232832869e-141 |
72 | 3 | ErPrT | Early proximal tubule | wk11 | TMEM176A | 55365 | 24930 | 1.26 | 0.73 | 0.03 | 0 | 0 |
72 | 3 | ErPrT | Early proximal tubule | wk11 | AKR1C3 | 8644 | 386 | 1.26 | 0.72 | 0.05 | 0 | 0 |
72 | 3 | ErPrT | Early proximal tubule | wk11 | ETFB | 2109 | 3482 | 1.25 | 0.95 | 0.45 | 2.15507292642736e-140 | 7.26130271830436e-136 |
72 | 3 | ErPrT | Early proximal tubule | wk11 | ALDH6A1 | 4329 | 7179 | 1.25 | 0.83 | 0.26 | 3.14834720114985e-139 | 1.06080410595543e-134 |
72 | 3 | ErPrT | Early proximal tubule | wk11 | ATP6V1F | 9296 | 16832 | 1.24 | 0.97 | 0.55 | 9.81074399176991e-139 | 3.30563208058695e-134 |
72 | 3 | ErPrT | Early proximal tubule | wk11 | UGT2A3 | 79799 | 28528 | 1.24 | 0.6 | 0.01 | 0 | 0 |
72 | 3 | ErPrT | Early proximal tubule | wk11 | S100A10 | 6281 | 10487 | 1.23 | 0.88 | 0.18 | 9.07815722844739e-198 | 3.05879429655307e-193 |
72 | 3 | ErPrT | Early proximal tubule | wk11 | ATP1B1 | 481 | 804 | 1.22 | 0.87 | 0.28 | 1.36398117768096e-139 | 4.59579818007824e-135 |
72 | 3 | ErPrT | Early proximal tubule | wk11 | GPX3 | 2878 | 4555 | 1.2 | 0.75 | 0.12 | 1.93198902300995e-202 | 6.50964381412972e-198 |
72 | 3 | ErPrT | Early proximal tubule | wk11 | TINAG | 27283 | 14599 | 1.2 | 0.57 | 0.009 | 0 | 0 |
72 | 3 | ErPrT | Early proximal tubule | wk11 | ADAMTS9-AS1 | 101929335 | 40625 | 1.19 | 0.64 | 0.04 | 0 | 0 |
72 | 3 | ErPrT | Early proximal tubule | wk11 | ALDH1A1 | 216 | 402 | 1.18 | 0.7 | 0.09 | 4.2713528179106e-214 | 1.4391896184668e-209 |
72 | 3 | ErPrT | Early proximal tubule | wk11 | GCHFR | 2644 | 4194 | 1.17 | 0.77 | 0.17 | 4.32580790735301e-165 | 1.45753771630352e-160 |
72 | 3 | ErPrT | Early proximal tubule | wk11 | CYP27A1 | 1593 | 2605 | 1.16 | 0.64 | 0.05 | 2.90487670935673e-260 | 9.78769158450658e-256 |
72 | 3 | ErPrT | Early proximal tubule | wk11 | C11orf54 | 28970 | 30204 | 1.15 | 0.83 | 0.27 | 7.36985305248901e-133 | 2.48319828750565e-128 |
72 | 3 | ErPrT | Early proximal tubule | wk11 | TMEM176B | 28959 | 29596 | 1.14 | 0.68 | 0.03 | 0 | 0 |
72 | 3 | ErPrT | Early proximal tubule | wk11 | HPN | 3249 | 5155 | 1.14 | 0.67 | 0.05 | 0 | 0 |
72 | 3 | ErPrT | Early proximal tubule | wk11 | ACAA2 | 10449 | 83 | 1.11 | 0.87 | 0.36 | 3.66787032602463e-118 | 1.23585222765074e-113 |
72 | 3 | ErPrT | Early proximal tubule | wk11 | POMC | 5443 | 9201 | 1.11 | 0.66 | 0.05 | 1.20150861707128e-271 | 4.04836313435996e-267 |
72 | 3 | ErPrT | Early proximal tubule | wk11 | CYB5A | 1528 | 2570 | 1.11 | 0.94 | 0.43 | 1.87369078294302e-120 | 6.3132137240482e-116 |
72 | 3 | ErPrT | Early proximal tubule | wk11 | DBI | 1622 | 2690 | 1.09 | 0.91 | 0.39 | 3.99763268104778e-124 | 1.34696235555224e-119 |
72 | 3 | ErPrT | Early proximal tubule | wk11 | BHMT | 635 | 1047 | 1.09 | 0.56 | 0.01 | 0 | 0 |
72 | 3 | ErPrT | Early proximal tubule | wk11 | BBOX1 | 8424 | 964 | 1.08 | 0.55 | 0.004 | 0 | 0 |
72 | 3 | ErPrT | Early proximal tubule | wk11 | LGMN | 5641 | 9472 | 1.08 | 0.71 | 0.2 | 1.04766929488966e-112 | 3.53001692220123e-108 |
72 | 3 | ErPrT | Early proximal tubule | wk11 | TNFSF10 | 8743 | 11925 | 1.08 | 0.47 | 0.01 | 0 | 0 |
72 | 3 | ErPrT | Early proximal tubule | wk11 | HAO2 | 51179 | 4810 | 1.07 | 0.5 | 0.002 | 0 | 0 |
72 | 3 | ErPrT | Early proximal tubule | wk11 | GK | 2710 | 4289 | 1.06 | 0.69 | 0.08 | 1.05302778338977e-231 | 3.54807181335349e-227 |
72 | 3 | ErPrT | Early proximal tubule | wk11 | HGD | 3081 | 4892 | 1.06 | 0.64 | 0.04 | 0 | 0 |
72 | 3 | ErPrT | Early proximal tubule | wk11 | AIG1 | 51390 | 21607 | 1.05 | 0.84 | 0.27 | 1.26095655492476e-135 | 4.24866701616349e-131 |
72 | 3 | ErPrT | Early proximal tubule | wk11 | SERPINF2 | 5345 | 9075 | 1.04 | 0.68 | 0.08 | 1.73867825497102e-218 | 5.85830251229937e-214 |
72 | 3 | ErPrT | Early proximal tubule | wk11 | GGT1 | 2678 | 4250 | 1.02 | 0.55 | 0.04 | 1.20694334273414e-227 | 4.06667489900842e-223 |
72 | 3 | ErPrT | Early proximal tubule | wk11 | STOM | 2040 | 3383 | 1.02 | 0.57 | 0.02 | 0 | 0 |
72 | 3 | ErPrT | Early proximal tubule | wk11 | CRYL1 | 51084 | 18246 | 1.02 | 0.65 | 0.11 | 1.09260754619415e-163 | 3.68143186614657e-159 |
72 | 3 | ErPrT | Early proximal tubule | wk11 | CHCHD10 | 400916 | 15559 | 1.02 | 0.82 | 0.25 | 5.45557811790655e-126 | 1.83820249104743e-121 |
72 | 3 | ErPrT | Early proximal tubule | wk11 | CLEC18B | 497190 | 33849 | 1.01 | 0.7 | 0.11 | 3.87572254691301e-177 | 1.30588595495687e-172 |
72 | 3 | ErPrT | Early proximal tubule | wk11 | ANXA4 | 307 | 542 | 1.01 | 0.79 | 0.27 | 1.69053713426854e-105 | 5.69609582020442e-101 |
72 | 3 | ErPrT | Early proximal tubule | wk11 | CEBPD | 1052 | 1835 | 0.99 | 0.87 | 0.31 | 8.03271563670351e-106 | 2.70654320663088e-101 |
72 | 3 | ErPrT | Early proximal tubule | wk11 | PTGR1 | 22949 | 18429 | 0.99 | 0.85 | 0.41 | 8.16631555236624e-87 | 2.75155836221428e-82 |
72 | 3 | ErPrT | Early proximal tubule | wk11 | SLC39A5 | 283375 | 20502 | 0.96 | 0.59 | 0.02 | 0 | 0 |
72 | 3 | ErPrT | Early proximal tubule | wk11 | FMO1 | 2326 | 3769 | 0.94 | 0.52 | 0.01 | 0 | 0 |
72 | 3 | ErPrT | Early proximal tubule | wk11 | RBM47 | 54502 | 30358 | 0.94 | 0.74 | 0.17 | 5.62431828426606e-137 | 1.89505780270061e-132 |
72 | 3 | ErPrT | Early proximal tubule | wk11 | FLRT3 | 23767 | 3762 | 0.94 | 0.78 | 0.23 | 7.18642066326575e-114 | 2.42139257828076e-109 |
72 | 3 | ErPrT | Early proximal tubule | wk11 | TUBB4B | 10383 | 20771 | 0.94 | 0.97 | 0.7 | 1.01485914250657e-81 | 3.41946639476165e-77 |
72 | 3 | ErPrT | Early proximal tubule | wk11 | LGALS2 | 3957 | 6562 | 0.93 | 0.56 | 0.03 | 1.62005614732955e-288 | 5.45861718281218e-284 |
72 | 3 | ErPrT | Early proximal tubule | wk11 | GJB1 | 2705 | 4283 | 0.93 | 0.56 | 0.04 | 5.37893692341302e-234 | 1.81237900697478e-229 |
72 | 3 | ErPrT | Early proximal tubule | wk11 | ASAH1 | 427 | 735 | 0.91 | 0.85 | 0.39 | 3.20182514419135e-85 | 1.07882296408383e-80 |
72 | 3 | ErPrT | Early proximal tubule | wk11 | BNIP3 | 664 | 1084 | 0.91 | 0.87 | 0.42 | 2.21102112361317e-92 | 7.44981457390223e-88 |
72 | 3 | ErPrT | Early proximal tubule | wk11 | EDIL3 | 10085 | 3173 | 0.91 | 0.5 | 0.05 | 4.78278854084632e-163 | 1.61151277095276e-158 |
72 | 3 | ErPrT | Early proximal tubule | wk11 | NIT2 | 56954 | 29878 | 0.9 | 0.67 | 0.23 | 1.60999424885895e-82 | 5.42471462210534e-78 |
72 | 3 | ErPrT | Early proximal tubule | wk11 | LINC02532 | 100422737 | 53549 | 0.9 | 0.53 | 0.01 | 0 | 0 |
72 | 3 | ErPrT | Early proximal tubule | wk11 | OCIAD2 | 132299 | 28685 | 0.89 | 0.91 | 0.49 | 1.20365674177429e-83 | 4.0556010257343e-79 |
72 | 3 | ErPrT | Early proximal tubule | wk11 | UGT3A1 | 133688 | 26625 | 0.89 | 0.49 | 0.03 | 1.78980435063712e-215 | 6.03056677903673e-211 |
72 | 3 | ErPrT | Early proximal tubule | wk11 | TMEM256 | 254863 | 28618 | 0.88 | 0.7 | 0.21 | 2.92805450260468e-95 | 9.86578684107621e-91 |
72 | 3 | ErPrT | Early proximal tubule | wk11 | SNHG8 | 100093630 | 33098 | 0.88 | 0.82 | 0.37 | 2.18305558596464e-79 | 7.35558749134925e-75 |
72 | 3 | ErPrT | Early proximal tubule | wk11 | DNPH1 | 10591 | 21218 | 0.88 | 0.85 | 0.39 | 1.47660088790324e-89 | 4.97525903170119e-85 |
72 | 3 | ErPrT | Early proximal tubule | wk11 | CD24 | 100133941 | 1645 | 0.88 | 0.98 | 0.55 | 1.03742281174714e-81 | 3.49549242190081e-77 |
72 | 3 | ErPrT | Early proximal tubule | wk11 | ASRGL1 | 80150 | 16448 | 0.88 | 0.63 | 0.18 | 5.46772878920137e-92 | 1.84229653823351e-87 |
72 | 3 | ErPrT | Early proximal tubule | wk11 | GLS | 2744 | 4331 | 0.88 | 0.58 | 0.18 | 1.00458262936031e-74 | 3.38484071136664e-70 |
72 | 3 | ErPrT | Early proximal tubule | wk11 | SLC13A1 | 6561 | 10916 | 0.88 | 0.38 | 0.006 | 0 | 0 |
72 | 3 | ErPrT | Early proximal tubule | wk11 | SLC39A4 | 55630 | 17129 | 0.88 | 0.54 | 0.13 | 1.07224687063178e-90 | 3.61282860590674e-86 |
72 | 3 | ErPrT | Early proximal tubule | wk11 | PPP1R16A | 84988 | 14941 | 0.87 | 0.82 | 0.39 | 2.72033943138947e-72 | 9.16591168012369e-68 |
72 | 3 | ErPrT | Early proximal tubule | wk11 | SLC27A2 | 11001 | 10996 | 0.87 | 0.49 | 0.06 | 8.95036598682889e-144 | 3.01573631560213e-139 |
72 | 3 | ErPrT | Early proximal tubule | wk11 | MDH1 | 4190 | 6970 | 0.86 | 0.96 | 0.63 | 5.72806746539895e-92 | 1.93001505179152e-87 |
72 | 3 | ErPrT | Early proximal tubule | wk11 | HNF4A | 3172 | 5024 | 0.85 | 0.43 | 0.02 | 2.3106078643817e-242 | 7.78536213824769e-238 |
72 | 3 | ErPrT | Early proximal tubule | wk11 | VCAN | 1462 | 2464 | 0.85 | 0.87 | 0.42 | 1.11288929100881e-79 | 3.74976917712508e-75 |
72 | 3 | ErPrT | Early proximal tubule | wk11 | GLYAT | 10249 | 13734 | 0.85 | 0.38 | 0.004 | 0 | 0 |
72 | 3 | ErPrT | Early proximal tubule | wk11 | ELF3 | 1999 | 3318 | 0.85 | 0.57 | 0.11 | 1.20466813668932e-112 | 4.05900881976099e-108 |
72 | 3 | ErPrT | Early proximal tubule | wk11 | ACAA1 | 30 | 82 | 0.84 | 0.73 | 0.25 | 4.74062460977725e-87 | 1.59730605601835e-82 |
72 | 3 | ErPrT | Early proximal tubule | wk11 | ACAT1 | 38 | 93 | 0.84 | 0.65 | 0.19 | 3.68188797134034e-87 | 1.24057533306341e-82 |
72 | 3 | ErPrT | Early proximal tubule | wk11 | LRP2 | 4036 | 6694 | 0.84 | 0.45 | 0.02 | 3.99800233327638e-234 | 1.34708690617414e-229 |
72 | 3 | ErPrT | Early proximal tubule | wk11 | CLU | 1191 | 2095 | 0.83 | 0.61 | 0.17 | 4.29654668233866e-82 | 1.44767843914719e-77 |
72 | 3 | ErPrT | Early proximal tubule | wk11 | CLDN3 | 1365 | 2045 | 0.83 | 0.73 | 0.22 | 8.01144469759665e-97 | 2.69937617640822e-92 |
72 | 3 | ErPrT | Early proximal tubule | wk11 | SLC44A4 | 80736 | 13941 | 0.82 | 0.47 | 0.04 | 1.80422319777329e-178 | 6.07914964257734e-174 |
72 | 3 | ErPrT | Early proximal tubule | wk11 | EPCAM | 4072 | 11529 | 0.82 | 0.85 | 0.36 | 1.46280743989112e-79 | 4.92878338796914e-75 |