Marker Genes
Dataset: Single-cell transcriptomics reveals gene expression dynamics of human fetal kidney development
- tissue: Kidney
- ontology: Kidney
- genotype: -
- stage: Fetal
- treatment condition: WT
- cell/nucleus: Cells
- pmid: 30789893
- subset name: wk11
- total genes: Not reported
- clustering: scran
- pseudotime: Monocle 2
- link: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE114530
Rows:100
| dataset id | cluster id | cluster name | cell type name | sample id | gene symbol | entrez geneid | species specific geneid |
avg log fc (?)
|
pct 1 | pct 2 | p value | padj |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 72 | 3 | ErPrT | Early proximal tubule | wk11 | APOE | 348 | 613 | 2.94 | 0.99 | 0.25 | 8.9924733654311E-270 | 3.0299239757484E-265 |
| 72 | 3 | ErPrT | Early proximal tubule | wk11 | SPP1 | 6696 | 11255 | 2.37 | 0.8 | 0.08 | 6.2141088792122E-305 | 2.0937818457617E-300 |
| 72 | 3 | ErPrT | Early proximal tubule | wk11 | APOM | 55937 | 13916 | 2.19 | 0.88 | 0.05 | 0 | 0 |
| 72 | 3 | ErPrT | Early proximal tubule | wk11 | LINC01781 | 101927412 | 52571 | 2.15 | 0.85 | 0.05 | 0 | 0 |
| 72 | 3 | ErPrT | Early proximal tubule | wk11 | SMIM24 | 284422 | 37244 | 2.1 | 0.95 | 0.06 | 0 | 0 |
| 72 | 3 | ErPrT | Early proximal tubule | wk11 | AFP | 174 | 317 | 2.03 | 0.88 | 0.02 | 0 | 0 |
| 72 | 3 | ErPrT | Early proximal tubule | wk11 | FTL | 2512 | 3999 | 2.02 | 1 | 0.96 | 4.0473763087791E-179 | 1.36372297348E-174 |
| 72 | 3 | ErPrT | Early proximal tubule | wk11 | GLYATL1 | 92292 | 30519 | 1.82 | 0.78 | 0.04 | 0 | 0 |
| 72 | 3 | ErPrT | Early proximal tubule | wk11 | AMN | 81693 | 14604 | 1.79 | 0.89 | 0.03 | 0 | 0 |
| 72 | 3 | ErPrT | Early proximal tubule | wk11 | SLC5A8 | 160728 | 19119 | 1.72 | 0.74 | 0.02 | 0 | 0 |
| 72 | 3 | ErPrT | Early proximal tubule | wk11 | APOA1 | 335 | 600 | 1.67 | 0.54 | 0.02 | 0 | 0 |
| 72 | 3 | ErPrT | Early proximal tubule | wk11 | MPC2 | 25874 | 24515 | 1.65 | 0.99 | 0.45 | 8.1822175391421E-184 | 2.7569163776385E-179 |
| 72 | 3 | ErPrT | Early proximal tubule | wk11 | CUBN | 8029 | 2548 | 1.62 | 0.81 | 0.01 | 0 | 0 |
| 72 | 3 | ErPrT | Early proximal tubule | wk11 | RIDA | 10247 | 16897 | 1.6 | 0.92 | 0.2 | 7.573753905259E-237 | 2.551900640838E-232 |
| 72 | 3 | ErPrT | Early proximal tubule | wk11 | MSRB1 | 51734 | 14133 | 1.55 | 0.91 | 0.29 | 2.5220147879689E-175 | 8.4976766265824E-171 |
| 72 | 3 | ErPrT | Early proximal tubule | wk11 | FXYD2 | 486 | 4026 | 1.55 | 0.89 | 0.11 | 0 | 0 |
| 72 | 3 | ErPrT | Early proximal tubule | wk11 | PDZK1 | 5174 | 8821 | 1.54 | 0.82 | 0.06 | 0 | 0 |
| 72 | 3 | ErPrT | Early proximal tubule | wk11 | SLC3A1 | 6519 | 11025 | 1.43 | 0.76 | 0.04 | 0 | 0 |
| 72 | 3 | ErPrT | Early proximal tubule | wk11 | DSEL | 92126 | 18144 | 1.4 | 0.74 | 0.07 | 9.2648819829371E-299 | 3.1217093353308E-294 |
| 72 | 3 | ErPrT | Early proximal tubule | wk11 | DAB2 | 1601 | 2662 | 1.4 | 0.9 | 0.23 | 1.2268973855798E-193 | 4.1339080509726E-189 |
| 72 | 3 | ErPrT | Early proximal tubule | wk11 | CYBA | 1535 | 2577 | 1.38 | 0.96 | 0.49 | 1.1984588608531E-140 | 4.0380872857585E-136 |
| 72 | 3 | ErPrT | Early proximal tubule | wk11 | KCNJ15 | 3772 | 6261 | 1.31 | 0.71 | 0.07 | 4.7332996990857E-255 | 1.59483800061E-250 |
| 72 | 3 | ErPrT | Early proximal tubule | wk11 | SERPINF1 | 5176 | 8824 | 1.29 | 0.77 | 0.2 | 8.9460248690998E-145 | 3.0142736193945E-140 |
| 72 | 3 | ErPrT | Early proximal tubule | wk11 | GATM | 2628 | 4175 | 1.29 | 0.64 | 0.04 | 0 | 0 |
| 72 | 3 | ErPrT | Early proximal tubule | wk11 | CARMIL1 | 55604 | 21581 | 1.27 | 0.78 | 0.09 | 1.9518700767693E-254 | 6.5766310366664E-250 |
| 72 | 3 | ErPrT | Early proximal tubule | wk11 | C1QTNF3 | 114899 | 14326 | 1.26 | 0.61 | 0.1 | 1.7800030653317E-145 | 5.9975423283287E-141 |
| 72 | 3 | ErPrT | Early proximal tubule | wk11 | TMEM176A | 55365 | 24930 | 1.26 | 0.73 | 0.03 | 0 | 0 |
| 72 | 3 | ErPrT | Early proximal tubule | wk11 | AKR1C3 | 8644 | 386 | 1.26 | 0.72 | 0.05 | 0 | 0 |
| 72 | 3 | ErPrT | Early proximal tubule | wk11 | ETFB | 2109 | 3482 | 1.25 | 0.95 | 0.45 | 2.1550729264274E-140 | 7.2613027183044E-136 |
| 72 | 3 | ErPrT | Early proximal tubule | wk11 | ALDH6A1 | 4329 | 7179 | 1.25 | 0.83 | 0.26 | 3.1483472011499E-139 | 1.0608041059554E-134 |
| 72 | 3 | ErPrT | Early proximal tubule | wk11 | ATP6V1F | 9296 | 16832 | 1.24 | 0.97 | 0.55 | 9.8107439917699E-139 | 3.3056320805869E-134 |
| 72 | 3 | ErPrT | Early proximal tubule | wk11 | UGT2A3 | 79799 | 28528 | 1.24 | 0.6 | 0.01 | 0 | 0 |
| 72 | 3 | ErPrT | Early proximal tubule | wk11 | S100A10 | 6281 | 10487 | 1.23 | 0.88 | 0.18 | 9.0781572284474E-198 | 3.0587942965531E-193 |
| 72 | 3 | ErPrT | Early proximal tubule | wk11 | ATP1B1 | 481 | 804 | 1.22 | 0.87 | 0.28 | 1.363981177681E-139 | 4.5957981800782E-135 |
| 72 | 3 | ErPrT | Early proximal tubule | wk11 | GPX3 | 2878 | 4555 | 1.2 | 0.75 | 0.12 | 1.93198902301E-202 | 6.5096438141297E-198 |
| 72 | 3 | ErPrT | Early proximal tubule | wk11 | TINAG | 27283 | 14599 | 1.2 | 0.57 | 0.009 | 0 | 0 |
| 72 | 3 | ErPrT | Early proximal tubule | wk11 | ADAMTS9-AS1 | 101929335 | 40625 | 1.19 | 0.64 | 0.04 | 0 | 0 |
| 72 | 3 | ErPrT | Early proximal tubule | wk11 | ALDH1A1 | 216 | 402 | 1.18 | 0.7 | 0.09 | 4.2713528179106E-214 | 1.4391896184668E-209 |
| 72 | 3 | ErPrT | Early proximal tubule | wk11 | GCHFR | 2644 | 4194 | 1.17 | 0.77 | 0.17 | 4.325807907353E-165 | 1.4575377163035E-160 |
| 72 | 3 | ErPrT | Early proximal tubule | wk11 | CYP27A1 | 1593 | 2605 | 1.16 | 0.64 | 0.05 | 2.9048767093567E-260 | 9.7876915845066E-256 |
| 72 | 3 | ErPrT | Early proximal tubule | wk11 | C11orf54 | 28970 | 30204 | 1.15 | 0.83 | 0.27 | 7.369853052489E-133 | 2.4831982875056E-128 |
| 72 | 3 | ErPrT | Early proximal tubule | wk11 | TMEM176B | 28959 | 29596 | 1.14 | 0.68 | 0.03 | 0 | 0 |
| 72 | 3 | ErPrT | Early proximal tubule | wk11 | HPN | 3249 | 5155 | 1.14 | 0.67 | 0.05 | 0 | 0 |
| 72 | 3 | ErPrT | Early proximal tubule | wk11 | ACAA2 | 10449 | 83 | 1.11 | 0.87 | 0.36 | 3.6678703260246E-118 | 1.2358522276507E-113 |
| 72 | 3 | ErPrT | Early proximal tubule | wk11 | POMC | 5443 | 9201 | 1.11 | 0.66 | 0.05 | 1.2015086170713E-271 | 4.04836313436E-267 |
| 72 | 3 | ErPrT | Early proximal tubule | wk11 | CYB5A | 1528 | 2570 | 1.11 | 0.94 | 0.43 | 1.873690782943E-120 | 6.3132137240482E-116 |
| 72 | 3 | ErPrT | Early proximal tubule | wk11 | DBI | 1622 | 2690 | 1.09 | 0.91 | 0.39 | 3.9976326810478E-124 | 1.3469623555522E-119 |
| 72 | 3 | ErPrT | Early proximal tubule | wk11 | BHMT | 635 | 1047 | 1.09 | 0.56 | 0.01 | 0 | 0 |
| 72 | 3 | ErPrT | Early proximal tubule | wk11 | BBOX1 | 8424 | 964 | 1.08 | 0.55 | 0.004 | 0 | 0 |
| 72 | 3 | ErPrT | Early proximal tubule | wk11 | LGMN | 5641 | 9472 | 1.08 | 0.71 | 0.2 | 1.0476692948897E-112 | 3.5300169222012E-108 |
| 72 | 3 | ErPrT | Early proximal tubule | wk11 | TNFSF10 | 8743 | 11925 | 1.08 | 0.47 | 0.01 | 0 | 0 |
| 72 | 3 | ErPrT | Early proximal tubule | wk11 | HAO2 | 51179 | 4810 | 1.07 | 0.5 | 0.002 | 0 | 0 |
| 72 | 3 | ErPrT | Early proximal tubule | wk11 | GK | 2710 | 4289 | 1.06 | 0.69 | 0.08 | 1.0530277833898E-231 | 3.5480718133535E-227 |
| 72 | 3 | ErPrT | Early proximal tubule | wk11 | HGD | 3081 | 4892 | 1.06 | 0.64 | 0.04 | 0 | 0 |
| 72 | 3 | ErPrT | Early proximal tubule | wk11 | AIG1 | 51390 | 21607 | 1.05 | 0.84 | 0.27 | 1.2609565549248E-135 | 4.2486670161635E-131 |
| 72 | 3 | ErPrT | Early proximal tubule | wk11 | SERPINF2 | 5345 | 9075 | 1.04 | 0.68 | 0.08 | 1.738678254971E-218 | 5.8583025122994E-214 |
| 72 | 3 | ErPrT | Early proximal tubule | wk11 | GGT1 | 2678 | 4250 | 1.02 | 0.55 | 0.04 | 1.2069433427341E-227 | 4.0666748990084E-223 |
| 72 | 3 | ErPrT | Early proximal tubule | wk11 | STOM | 2040 | 3383 | 1.02 | 0.57 | 0.02 | 0 | 0 |
| 72 | 3 | ErPrT | Early proximal tubule | wk11 | CRYL1 | 51084 | 18246 | 1.02 | 0.65 | 0.11 | 1.0926075461942E-163 | 3.6814318661466E-159 |
| 72 | 3 | ErPrT | Early proximal tubule | wk11 | CHCHD10 | 400916 | 15559 | 1.02 | 0.82 | 0.25 | 5.4555781179066E-126 | 1.8382024910474E-121 |
| 72 | 3 | ErPrT | Early proximal tubule | wk11 | CLEC18B | 497190 | 33849 | 1.01 | 0.7 | 0.11 | 3.875722546913E-177 | 1.3058859549569E-172 |
| 72 | 3 | ErPrT | Early proximal tubule | wk11 | ANXA4 | 307 | 542 | 1.01 | 0.79 | 0.27 | 1.6905371342685E-105 | 5.6960958202044E-101 |
| 72 | 3 | ErPrT | Early proximal tubule | wk11 | CEBPD | 1052 | 1835 | 0.99 | 0.87 | 0.31 | 8.0327156367035E-106 | 2.7065432066309E-101 |
| 72 | 3 | ErPrT | Early proximal tubule | wk11 | PTGR1 | 22949 | 18429 | 0.99 | 0.85 | 0.41 | 8.1663155523662E-87 | 2.7515583622143E-82 |
| 72 | 3 | ErPrT | Early proximal tubule | wk11 | SLC39A5 | 283375 | 20502 | 0.96 | 0.59 | 0.02 | 0 | 0 |
| 72 | 3 | ErPrT | Early proximal tubule | wk11 | FMO1 | 2326 | 3769 | 0.94 | 0.52 | 0.01 | 0 | 0 |
| 72 | 3 | ErPrT | Early proximal tubule | wk11 | RBM47 | 54502 | 30358 | 0.94 | 0.74 | 0.17 | 5.6243182842661E-137 | 1.8950578027006E-132 |
| 72 | 3 | ErPrT | Early proximal tubule | wk11 | FLRT3 | 23767 | 3762 | 0.94 | 0.78 | 0.23 | 7.1864206632658E-114 | 2.4213925782808E-109 |
| 72 | 3 | ErPrT | Early proximal tubule | wk11 | TUBB4B | 10383 | 20771 | 0.94 | 0.97 | 0.7 | 1.0148591425066E-81 | 3.4194663947617E-77 |
| 72 | 3 | ErPrT | Early proximal tubule | wk11 | LGALS2 | 3957 | 6562 | 0.93 | 0.56 | 0.03 | 1.6200561473295E-288 | 5.4586171828122E-284 |
| 72 | 3 | ErPrT | Early proximal tubule | wk11 | GJB1 | 2705 | 4283 | 0.93 | 0.56 | 0.04 | 5.378936923413E-234 | 1.8123790069748E-229 |
| 72 | 3 | ErPrT | Early proximal tubule | wk11 | ASAH1 | 427 | 735 | 0.91 | 0.85 | 0.39 | 3.2018251441914E-85 | 1.0788229640838E-80 |
| 72 | 3 | ErPrT | Early proximal tubule | wk11 | BNIP3 | 664 | 1084 | 0.91 | 0.87 | 0.42 | 2.2110211236132E-92 | 7.4498145739022E-88 |
| 72 | 3 | ErPrT | Early proximal tubule | wk11 | EDIL3 | 10085 | 3173 | 0.91 | 0.5 | 0.05 | 4.7827885408463E-163 | 1.6115127709528E-158 |
| 72 | 3 | ErPrT | Early proximal tubule | wk11 | NIT2 | 56954 | 29878 | 0.9 | 0.67 | 0.23 | 1.6099942488589E-82 | 5.4247146221053E-78 |
| 72 | 3 | ErPrT | Early proximal tubule | wk11 | LINC02532 | 100422737 | 53549 | 0.9 | 0.53 | 0.01 | 0 | 0 |
| 72 | 3 | ErPrT | Early proximal tubule | wk11 | OCIAD2 | 132299 | 28685 | 0.89 | 0.91 | 0.49 | 1.2036567417743E-83 | 4.0556010257343E-79 |
| 72 | 3 | ErPrT | Early proximal tubule | wk11 | UGT3A1 | 133688 | 26625 | 0.89 | 0.49 | 0.03 | 1.7898043506371E-215 | 6.0305667790367E-211 |
| 72 | 3 | ErPrT | Early proximal tubule | wk11 | TMEM256 | 254863 | 28618 | 0.88 | 0.7 | 0.21 | 2.9280545026047E-95 | 9.8657868410762E-91 |
| 72 | 3 | ErPrT | Early proximal tubule | wk11 | SNHG8 | 100093630 | 33098 | 0.88 | 0.82 | 0.37 | 2.1830555859646E-79 | 7.3555874913492E-75 |
| 72 | 3 | ErPrT | Early proximal tubule | wk11 | DNPH1 | 10591 | 21218 | 0.88 | 0.85 | 0.39 | 1.4766008879032E-89 | 4.9752590317012E-85 |
| 72 | 3 | ErPrT | Early proximal tubule | wk11 | CD24 | 100133941 | 1645 | 0.88 | 0.98 | 0.55 | 1.0374228117471E-81 | 3.4954924219008E-77 |
| 72 | 3 | ErPrT | Early proximal tubule | wk11 | ASRGL1 | 80150 | 16448 | 0.88 | 0.63 | 0.18 | 5.4677287892014E-92 | 1.8422965382335E-87 |
| 72 | 3 | ErPrT | Early proximal tubule | wk11 | GLS | 2744 | 4331 | 0.88 | 0.58 | 0.18 | 1.0045826293603E-74 | 3.3848407113666E-70 |
| 72 | 3 | ErPrT | Early proximal tubule | wk11 | SLC13A1 | 6561 | 10916 | 0.88 | 0.38 | 0.006 | 0 | 0 |
| 72 | 3 | ErPrT | Early proximal tubule | wk11 | SLC39A4 | 55630 | 17129 | 0.88 | 0.54 | 0.13 | 1.0722468706318E-90 | 3.6128286059067E-86 |
| 72 | 3 | ErPrT | Early proximal tubule | wk11 | PPP1R16A | 84988 | 14941 | 0.87 | 0.82 | 0.39 | 2.7203394313895E-72 | 9.1659116801237E-68 |
| 72 | 3 | ErPrT | Early proximal tubule | wk11 | SLC27A2 | 11001 | 10996 | 0.87 | 0.49 | 0.06 | 8.9503659868289E-144 | 3.0157363156021E-139 |
| 72 | 3 | ErPrT | Early proximal tubule | wk11 | MDH1 | 4190 | 6970 | 0.86 | 0.96 | 0.63 | 5.7280674653989E-92 | 1.9300150517915E-87 |
| 72 | 3 | ErPrT | Early proximal tubule | wk11 | HNF4A | 3172 | 5024 | 0.85 | 0.43 | 0.02 | 2.3106078643817E-242 | 7.7853621382477E-238 |
| 72 | 3 | ErPrT | Early proximal tubule | wk11 | VCAN | 1462 | 2464 | 0.85 | 0.87 | 0.42 | 1.1128892910088E-79 | 3.7497691771251E-75 |
| 72 | 3 | ErPrT | Early proximal tubule | wk11 | GLYAT | 10249 | 13734 | 0.85 | 0.38 | 0.004 | 0 | 0 |
| 72 | 3 | ErPrT | Early proximal tubule | wk11 | ELF3 | 1999 | 3318 | 0.85 | 0.57 | 0.11 | 1.2046681366893E-112 | 4.059008819761E-108 |
| 72 | 3 | ErPrT | Early proximal tubule | wk11 | ACAA1 | 30 | 82 | 0.84 | 0.73 | 0.25 | 4.7406246097772E-87 | 1.5973060560183E-82 |
| 72 | 3 | ErPrT | Early proximal tubule | wk11 | ACAT1 | 38 | 93 | 0.84 | 0.65 | 0.19 | 3.6818879713403E-87 | 1.2405753330634E-82 |
| 72 | 3 | ErPrT | Early proximal tubule | wk11 | LRP2 | 4036 | 6694 | 0.84 | 0.45 | 0.02 | 3.9980023332764E-234 | 1.3470869061741E-229 |
| 72 | 3 | ErPrT | Early proximal tubule | wk11 | CLU | 1191 | 2095 | 0.83 | 0.61 | 0.17 | 4.2965466823387E-82 | 1.4476784391472E-77 |
| 72 | 3 | ErPrT | Early proximal tubule | wk11 | CLDN3 | 1365 | 2045 | 0.83 | 0.73 | 0.22 | 8.0114446975966E-97 | 2.6993761764082E-92 |
| 72 | 3 | ErPrT | Early proximal tubule | wk11 | SLC44A4 | 80736 | 13941 | 0.82 | 0.47 | 0.04 | 1.8042231977733E-178 | 6.0791496425773E-174 |
| 72 | 3 | ErPrT | Early proximal tubule | wk11 | EPCAM | 4072 | 11529 | 0.82 | 0.85 | 0.36 | 1.4628074398911E-79 | 4.9287833879691E-75 |