Marker Genes
Dataset: Single-cell transcriptomics reveals gene expression dynamics of human fetal kidney development
- tissue: Kidney
- ontology: Kidney
- genotype: -
- stage: Fetal
- treatment condition: WT
- cell/nucleus: Cells
- pmid: 30789893
- subset name: wk11
- total genes: Not reported
- clustering: scran
- pseudotime: Monocle 2
- link: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE114530
Rows:100
| dataset id | cluster id | cluster name | cell type name | sample id | gene symbol | entrez geneid | species specific geneid |
avg log fc (?)
|
pct 1 | pct 2 | p value | padj |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 72 | 2 | End | Endothelial cells | wk11 | RAMP2 | 10266 | 9844 | 2.34 | 0.91 | 0.06 | 4.1505949846E-95 | 1.3985014741111E-90 |
| 72 | 2 | End | Endothelial cells | wk11 | PLVAP | 83483 | 13635 | 2.31 | 0.86 | 0.07 | 6.2796136951129E-76 | 2.1158530384313E-71 |
| 72 | 2 | End | Endothelial cells | wk11 | GNG11 | 2791 | 4403 | 2.2 | 0.97 | 0.15 | 1.7908750035739E-53 | 6.0341742370418E-49 |
| 72 | 2 | End | Endothelial cells | wk11 | EGFL7 | 51162 | 20594 | 2.18 | 0.91 | 0.15 | 5.149911201803E-47 | 1.7352110803355E-42 |
| 72 | 2 | End | Endothelial cells | wk11 | PRCP | 5547 | 9344 | 2.11 | 0.97 | 0.3 | 1.8487590601727E-33 | 6.2292087773458E-29 |
| 72 | 2 | End | Endothelial cells | wk11 | CAVIN2 | 8436 | 10690 | 2.07 | 0.86 | 0.02 | 5.1403775639999E-192 | 1.7319988164141E-187 |
| 72 | 2 | End | Endothelial cells | wk11 | APLNR | 187 | 339 | 1.95 | 0.86 | 0.003 | 0 | 0 |
| 72 | 2 | End | Endothelial cells | wk11 | TM4SF1 | 4071 | 11853 | 1.91 | 0.88 | 0.02 | 2.9886363269269E-211 | 1.0069911239948E-206 |
| 72 | 2 | End | Endothelial cells | wk11 | CD34 | 947 | 1662 | 1.79 | 0.69 | 0.004 | 0 | 0 |
| 72 | 2 | End | Endothelial cells | wk11 | HSPB1 | 3315 | 5246 | 1.77 | 0.91 | 0.5 | 1.8054309536587E-20 | 6.0832190552575E-16 |
| 72 | 2 | End | Endothelial cells | wk11 | IL32 | 9235 | 16830 | 1.77 | 0.66 | 0.01 | 4.436600491775E-188 | 1.4948681696986E-183 |
| 72 | 2 | End | Endothelial cells | wk11 | LGALS1 | 3956 | 6561 | 1.72 | 0.69 | 0.16 | 6.0228112007499E-20 | 2.0293260059807E-15 |
| 72 | 2 | End | Endothelial cells | wk11 | EMCN | 51705 | 16041 | 1.71 | 0.83 | 0.05 | 6.0910993004767E-89 | 2.0523349983026E-84 |
| 72 | 2 | End | Endothelial cells | wk11 | CDH5 | 1003 | 1764 | 1.71 | 0.83 | 0.003 | 0 | 0 |
| 72 | 2 | End | Endothelial cells | wk11 | ICAM2 | 3384 | 5345 | 1.7 | 0.72 | 0.005 | 0 | 0 |
| 72 | 2 | End | Endothelial cells | wk11 | ECSCR | 641700 | 35454 | 1.69 | 0.63 | 0.003 | 0 | 0 |
| 72 | 2 | End | Endothelial cells | wk11 | MEF2C | 4208 | 6996 | 1.64 | 0.72 | 0.03 | 2.2677946392015E-113 | 7.6411072573256E-109 |
| 72 | 2 | End | Endothelial cells | wk11 | KANK3 | 256949 | 24796 | 1.63 | 0.69 | 0.008 | 2.1840458077753E-296 | 7.3589239447182E-292 |
| 72 | 2 | End | Endothelial cells | wk11 | B2M | 567 | 914 | 1.62 | 1 | 0.63 | 7.1706366330918E-22 | 2.4160743071539E-17 |
| 72 | 2 | End | Endothelial cells | wk11 | PECAM1 | 5175 | 8823 | 1.61 | 0.69 | 0.002 | 0 | 0 |
| 72 | 2 | End | Endothelial cells | wk11 | TM4SF18 | 116441 | 25181 | 1.59 | 0.69 | 0.001 | 0 | 0 |
| 72 | 2 | End | Endothelial cells | wk11 | ESAM | 90952 | 17474 | 1.58 | 0.63 | 0.04 | 1.5126044723537E-64 | 5.0965695091485E-60 |
| 72 | 2 | End | Endothelial cells | wk11 | GMFG | 9535 | 4374 | 1.57 | 0.69 | 0.007 | 2.4797599697484E-306 | 8.3553032420701E-302 |
| 72 | 2 | End | Endothelial cells | wk11 | NTS | 4922 | 8038 | 1.56 | 0.38 | 0.002 | 2.1427183981365E-239 | 7.2196753706811E-235 |
| 72 | 2 | End | Endothelial cells | wk11 | COTL1 | 23406 | 18304 | 1.53 | 0.91 | 0.47 | 5.609429695827E-19 | 1.8900412417119E-14 |
| 72 | 2 | End | Endothelial cells | wk11 | TCIM | 56892 | 1357 | 1.53 | 0.66 | 0.15 | 1.3623366510214E-20 | 4.5902571119513E-16 |
| 72 | 2 | End | Endothelial cells | wk11 | RNASE1 | 6035 | 10044 | 1.52 | 0.58 | 0.002 | 0 | 0 |
| 72 | 2 | End | Endothelial cells | wk11 | S100A16 | 140576 | 20441 | 1.52 | 0.77 | 0.26 | 2.4819758866271E-20 | 8.3627695524013E-16 |
| 72 | 2 | End | Endothelial cells | wk11 | S100A10 | 6281 | 10487 | 1.51 | 0.83 | 0.22 | 5.3190701270604E-25 | 1.7922074886117E-20 |
| 72 | 2 | End | Endothelial cells | wk11 | RBP5 | 83758 | 15847 | 1.51 | 0.66 | 0.01 | 3.0011556528406E-239 | 1.0112093856681E-234 |
| 72 | 2 | End | Endothelial cells | wk11 | HSPG2 | 3339 | 5273 | 1.5 | 0.69 | 0.08 | 1.6170409576391E-43 | 5.448457802669E-39 |
| 72 | 2 | End | Endothelial cells | wk11 | CD93 | 22918 | 15855 | 1.5 | 0.66 | 0.001 | 0 | 0 |
| 72 | 2 | End | Endothelial cells | wk11 | TMSB10 | 9168 | 11879 | 1.49 | 1 | 0.91 | 9.7195843417704E-24 | 3.2749167481161E-19 |
| 72 | 2 | End | Endothelial cells | wk11 | SPTBN1 | 6711 | 11275 | 1.48 | 0.77 | 0.21 | 2.5474390355097E-23 | 8.5833410862466E-19 |
| 72 | 2 | End | Endothelial cells | wk11 | ITM2A | 9452 | 6173 | 1.46 | 0.72 | 0.03 | 2.9478831281518E-92 | 9.9325974119946E-88 |
| 72 | 2 | End | Endothelial cells | wk11 | GYPC | 2995 | 4704 | 1.42 | 0.88 | 0.32 | 2.187523639599E-23 | 7.3706421512649E-19 |
| 72 | 2 | End | Endothelial cells | wk11 | THY1 | 7070 | 11801 | 1.42 | 0.61 | 0.06 | 5.0645307308092E-39 | 1.7064429844388E-34 |
| 72 | 2 | End | Endothelial cells | wk11 | CCL2 | 6347 | 10618 | 1.41 | 0.33 | 0.02 | 1.21871881727E-36 | 4.1063511829094E-32 |
| 72 | 2 | End | Endothelial cells | wk11 | TIE1 | 7075 | 11809 | 1.4 | 0.58 | 0.003 | 0 | 0 |
| 72 | 2 | End | Endothelial cells | wk11 | CALM1 | 801 | 1442 | 1.4 | 0.94 | 0.64 | 3.5943815407372E-18 | 1.211090916336E-13 |
| 72 | 2 | End | Endothelial cells | wk11 | CRIP2 | 1397 | 2361 | 1.4 | 0.83 | 0.43 | 1.5469016805779E-13 | 5.212130522539E-9 |
| 72 | 2 | End | Endothelial cells | wk11 | TMEM88 | 92162 | 32371 | 1.38 | 0.61 | 0.04 | 1.9523295887079E-58 | 6.5781793161923E-54 |
| 72 | 2 | End | Endothelial cells | wk11 | LINC00305 | 221241 | 28597 | 1.38 | 0.52 | 0.002 | 0 | 0 |
| 72 | 2 | End | Endothelial cells | wk11 | CCDC85B | 11007 | 24926 | 1.37 | 0.66 | 0.2 | 9.6588952899539E-17 | 3.2544681789971E-12 |
| 72 | 2 | End | Endothelial cells | wk11 | NRP2 | 8828 | 8005 | 1.36 | 0.66 | 0.14 | 1.0690197921446E-22 | 3.6019552876521E-18 |
| 72 | 2 | End | Endothelial cells | wk11 | HLA-E | 3133 | 4962 | 1.36 | 0.66 | 0.12 | 8.0310582176193E-26 | 2.7059847558446E-21 |
| 72 | 2 | End | Endothelial cells | wk11 | RHOC | 389 | 669 | 1.35 | 0.8 | 0.4 | 3.9031922935101E-16 | 1.3151416113753E-11 |
| 72 | 2 | End | Endothelial cells | wk11 | TFPI | 7035 | 11760 | 1.31 | 0.55 | 0.04 | 6.4977974901053E-49 | 2.1893678863161E-44 |
| 72 | 2 | End | Endothelial cells | wk11 | KDR | 3791 | 6307 | 1.3 | 0.58 | 0.004 | 0 | 0 |
| 72 | 2 | End | Endothelial cells | wk11 | CETP | 1071 | 1869 | 1.28 | 0.5 | 0.001 | 0 | 0 |
| 72 | 2 | End | Endothelial cells | wk11 | PLXND1 | 23129 | 9107 | 1.28 | 0.61 | 0.06 | 1.5275058574874E-44 | 5.1467782362182E-40 |
| 72 | 2 | End | Endothelial cells | wk11 | NOSTRIN | 115677 | 20203 | 1.24 | 0.47 | 0.006 | 5.4991830720533E-180 | 1.8528947442977E-175 |
| 72 | 2 | End | Endothelial cells | wk11 | CALCRL | 10203 | 16709 | 1.24 | 0.58 | 0.01 | 2.8978343313697E-128 | 9.7639629961172E-124 |
| 72 | 2 | End | Endothelial cells | wk11 | MSN | 4478 | 7373 | 1.23 | 0.8 | 0.23 | 4.4009585404077E-23 | 1.482858970605E-18 |
| 72 | 2 | End | Endothelial cells | wk11 | A2M | 2 | 7 | 1.23 | 0.47 | 0.008 | 2.3475282142313E-147 | 7.909761565031E-143 |
| 72 | 2 | End | Endothelial cells | wk11 | CYP26B1 | 56603 | 20581 | 1.22 | 0.41 | 0.006 | 7.4904016936241E-157 | 2.5238159466497E-152 |
| 72 | 2 | End | Endothelial cells | wk11 | SERPINH1 | 871 | 1546 | 1.22 | 0.91 | 0.67 | 1.7842359843404E-14 | 6.0118047256365E-10 |
| 72 | 2 | End | Endothelial cells | wk11 | FKBP1A | 2280 | 3711 | 1.21 | 0.97 | 0.78 | 4.7611323586861E-18 | 1.6042159369357E-13 |
| 72 | 2 | End | Endothelial cells | wk11 | GIMAP4 | 55303 | 21872 | 1.21 | 0.36 | 0.002 | 2.396999125176E-225 | 8.0764488523681E-221 |
| 72 | 2 | End | Endothelial cells | wk11 | HLA-B | 3106 | 4932 | 1.2 | 0.41 | 0.09 | 1.4175973459324E-11 | 4.7764524973845E-7 |
| 72 | 2 | End | Endothelial cells | wk11 | MMRN2 | 79812 | 19888 | 1.15 | 0.5 | 0.001 | 0 | 0 |
| 72 | 2 | End | Endothelial cells | wk11 | ENG | 2022 | 3349 | 1.14 | 0.47 | 0.03 | 1.5719032552225E-49 | 5.2963708281468E-45 |
| 72 | 2 | End | Endothelial cells | wk11 | MYL12A | 10627 | 16701 | 1.14 | 1 | 0.76 | 3.5290980214188E-17 | 1.1890942873369E-12 |
| 72 | 2 | End | Endothelial cells | wk11 | IFI16 | 3428 | 5395 | 1.14 | 0.63 | 0.04 | 1.7353921907319E-58 | 5.8472304474522E-54 |
| 72 | 2 | End | Endothelial cells | wk11 | IGFBP5 | 3488 | 5474 | 1.14 | 0.61 | 0.12 | 1.0140884609015E-19 | 3.4168696601615E-15 |
| 72 | 2 | End | Endothelial cells | wk11 | LRRC32 | 2615 | 4161 | 1.14 | 0.36 | 0.008 | 1.6951001351028E-96 | 5.7114703952153E-92 |
| 72 | 2 | End | Endothelial cells | wk11 | PCAT19 | 100505495 | 49593 | 1.13 | 0.47 | 0.001 | 0 | 0 |
| 72 | 2 | End | Endothelial cells | wk11 | FN1 | 2335 | 3778 | 1.13 | 0.66 | 0.1 | 3.528580817529E-28 | 1.1889200206582E-23 |
| 72 | 2 | End | Endothelial cells | wk11 | CAVIN1 | 284119 | 9688 | 1.13 | 0.44 | 0.03 | 8.520391157217E-42 | 2.8708605965127E-37 |
| 72 | 2 | End | Endothelial cells | wk11 | PFN1 | 5216 | 8881 | 1.12 | 1 | 0.88 | 1.90807409888E-17 | 6.4290648687662E-13 |
| 72 | 2 | End | Endothelial cells | wk11 | EMP1 | 2012 | 3333 | 1.11 | 0.52 | 0.06 | 4.9839359036822E-29 | 1.6792873633867E-24 |
| 72 | 2 | End | Endothelial cells | wk11 | ELK3 | 2004 | 3325 | 1.1 | 0.5 | 0.04 | 1.3050473444016E-39 | 4.3972265222266E-35 |
| 72 | 2 | End | Endothelial cells | wk11 | SDCBP | 6386 | 10662 | 1.1 | 0.83 | 0.49 | 2.970653442701E-13 | 1.0009319709837E-8 |
| 72 | 2 | End | Endothelial cells | wk11 | GIMAP7 | 168537 | 22404 | 1.1 | 0.5 | 0.001 | 0 | 0 |
| 72 | 2 | End | Endothelial cells | wk11 | CLDN5 | 7122 | 2047 | 1.1 | 0.75 | 0.42 | 4.2486464824732E-8 | 0.0014315389458045 |
| 72 | 2 | End | Endothelial cells | wk11 | ADGRL4 | 64123 | 20822 | 1.1 | 0.41 | 0.001 | 8.9332884582709E-300 | 3.0099822131298E-295 |
| 72 | 2 | End | Endothelial cells | wk11 | NFIB | 4781 | 7785 | 1.09 | 0.61 | 0.06 | 5.6033619274888E-38 | 1.8879967678481E-33 |
| 72 | 2 | End | Endothelial cells | wk11 | PLPP3 | 8613 | 9229 | 1.08 | 0.86 | 0.3 | 3.4984615642448E-18 | 1.1787716394566E-13 |
| 72 | 2 | End | Endothelial cells | wk11 | MAP4K4 | 9448 | 6866 | 1.05 | 0.44 | 0.13 | 1.7065755497233E-9 | 5.7501356572377E-5 |
| 72 | 2 | End | Endothelial cells | wk11 | CLEC14A | 161198 | 19832 | 1.04 | 0.41 | 0.004 | 1.9389401022647E-182 | 6.5330647805708E-178 |
| 72 | 2 | End | Endothelial cells | wk11 | PCDH17 | 27253 | 14267 | 1.03 | 0.47 | 0.05 | 6.0588209569426E-28 | 2.0414591332322E-23 |
| 72 | 2 | End | Endothelial cells | wk11 | DUSP6 | 1848 | 3072 | 1.03 | 0.61 | 0.19 | 3.1184074982854E-13 | 1.0507162224723E-8 |
| 72 | 2 | End | Endothelial cells | wk11 | LUZP1 | 7798 | 14985 | 1.03 | 0.69 | 0.22 | 6.6109616347078E-16 | 2.2274974131984E-11 |
| 72 | 2 | End | Endothelial cells | wk11 | PMP22 | 5376 | 9118 | 1.02 | 0.61 | 0.13 | 7.1896791220418E-18 | 2.4224904833808E-13 |
| 72 | 2 | End | Endothelial cells | wk11 | CAV1 | 857 | 1527 | 1.02 | 0.52 | 0.01 | 3.224606889411E-147 | 1.0864990453181E-142 |
| 72 | 2 | End | Endothelial cells | wk11 | CD74 | 972 | 1697 | 1.01 | 0.5 | 0.19 | 1.6274577065224E-8 | 0.00054835559963565 |
| 72 | 2 | End | Endothelial cells | wk11 | TMEM204 | 79652 | 14158 | 1.01 | 0.3 | 0.01 | 2.1161277357065E-40 | 7.1300807926893E-36 |
| 72 | 2 | End | Endothelial cells | wk11 | ARHGEF15 | 22899 | 15590 | 1.01 | 0.36 | 0.003 | 5.8539212710615E-177 | 1.9724202330715E-172 |
| 72 | 2 | End | Endothelial cells | wk11 | TPM3 | 7170 | 12012 | 0.99 | 0.83 | 0.55 | 3.3037392739242E-11 | 1.113161910956E-6 |
| 72 | 2 | End | Endothelial cells | wk11 | LPAR6 | 10161 | 15520 | 0.99 | 0.47 | 0.09 | 1.7734766690981E-15 | 5.9755522888592E-11 |
| 72 | 2 | End | Endothelial cells | wk11 | CLIC4 | 25932 | 13518 | 0.98 | 0.66 | 0.32 | 4.31651186109E-9 | 0.00014544055064757 |
| 72 | 2 | End | Endothelial cells | wk11 | MARCKS | 4082 | 6759 | 0.98 | 0.97 | 0.67 | 7.2044724074044E-12 | 2.4274749329508E-7 |
| 72 | 2 | End | Endothelial cells | wk11 | CCDC34 | 91057 | 25079 | 0.97 | 0.55 | 0.23 | 5.9188974413794E-8 | 0.0019943133038984 |
| 72 | 2 | End | Endothelial cells | wk11 | HLA-A | 3105 | 4931 | 0.96 | 0.8 | 0.47 | 7.3706228540402E-10 | 2.4834576644403E-5 |
| 72 | 2 | End | Endothelial cells | wk11 | COL4A1 | 1282 | 2202 | 0.96 | 0.55 | 0.29 | 1.466267890071E-6 | 0.04 |
| 72 | 2 | End | Endothelial cells | wk11 | HSPA12B | 116835 | 16193 | 0.96 | 0.3 | 0.02 | 1.1046758966505E-28 | 3.7220949661743E-24 |
| 72 | 2 | End | Endothelial cells | wk11 | TMSB4X | 7114 | 11881 | 0.96 | 1 | 0.99 | 7.2894442319012E-17 | 2.4561053394968E-12 |
| 72 | 2 | End | Endothelial cells | wk11 | ADGRF5 | 221395 | 19030 | 0.95 | 0.33 | 0.001 | 1.2664449835134E-234 | 4.2671597274501E-230 |
| 72 | 2 | End | Endothelial cells | wk11 | RBP1 | 5947 | 9919 | 0.94 | 0.91 | 0.55 | 9.4037645234024E-12 | 3.1685044185152E-7 |
| 72 | 2 | End | Endothelial cells | wk11 | PIEZO2 | 63895 | 26270 | 0.94 | 0.36 | 0.007 | 2.0421888190074E-109 | 6.8809510067635E-105 |