Marker Genes
Dataset: Single-cell transcriptomics reveals gene expression dynamics of human fetal kidney development
- tissue: Kidney
- ontology: Kidney
- genotype: -
- stage: Fetal
- treatment condition: WT
- cell/nucleus: Cells
- pmid: 30789893
- subset name: wk11
- total genes: Not reported
- clustering: scran
- pseudotime: Monocle 2
- link: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE114530
Rows:100
dataset id | cluster id | cluster name | cell type name | sample id | gene symbol | entrez geneid | species specific geneid |
avg log fc (?)
|
pct 1 | pct 2 | p value | padj |
---|---|---|---|---|---|---|---|---|---|---|---|---|
72 | 2 | End | Endothelial cells | wk11 | RAMP2 | 10266 | 9844 | 2.34 | 0.91 | 0.06 | 4.15059498460001e-95 | 1.39850147411113e-90 |
72 | 2 | End | Endothelial cells | wk11 | PLVAP | 83483 | 13635 | 2.31 | 0.86 | 0.07 | 6.27961369511292e-76 | 2.11585303843135e-71 |
72 | 2 | End | Endothelial cells | wk11 | GNG11 | 2791 | 4403 | 2.2 | 0.97 | 0.15 | 1.79087500357386e-53 | 6.03417423704175e-49 |
72 | 2 | End | Endothelial cells | wk11 | EGFL7 | 51162 | 20594 | 2.18 | 0.91 | 0.15 | 5.14991120180302e-47 | 1.73521108033551e-42 |
72 | 2 | End | Endothelial cells | wk11 | PRCP | 5547 | 9344 | 2.11 | 0.97 | 0.3 | 1.84875906017266e-33 | 6.22920877734577e-29 |
72 | 2 | End | Endothelial cells | wk11 | CAVIN2 | 8436 | 10690 | 2.07 | 0.86 | 0.02 | 5.14037756399993e-192 | 1.73199881641414e-187 |
72 | 2 | End | Endothelial cells | wk11 | APLNR | 187 | 339 | 1.95 | 0.86 | 0.003 | 0 | 0 |
72 | 2 | End | Endothelial cells | wk11 | TM4SF1 | 4071 | 11853 | 1.91 | 0.88 | 0.02 | 2.98863632692691e-211 | 1.00699112399475e-206 |
72 | 2 | End | Endothelial cells | wk11 | CD34 | 947 | 1662 | 1.79 | 0.69 | 0.004 | 0 | 0 |
72 | 2 | End | Endothelial cells | wk11 | HSPB1 | 3315 | 5246 | 1.77 | 0.91 | 0.5 | 1.80543095365866e-20 | 6.08321905525749e-16 |
72 | 2 | End | Endothelial cells | wk11 | IL32 | 9235 | 16830 | 1.77 | 0.66 | 0.01 | 4.43660049177496e-188 | 1.49486816969865e-183 |
72 | 2 | End | Endothelial cells | wk11 | LGALS1 | 3956 | 6561 | 1.72 | 0.69 | 0.16 | 6.02281120074995e-20 | 2.02932600598069e-15 |
72 | 2 | End | Endothelial cells | wk11 | EMCN | 51705 | 16041 | 1.71 | 0.83 | 0.05 | 6.09109930047668e-89 | 2.05233499830261e-84 |
72 | 2 | End | Endothelial cells | wk11 | CDH5 | 1003 | 1764 | 1.71 | 0.83 | 0.003 | 0 | 0 |
72 | 2 | End | Endothelial cells | wk11 | ICAM2 | 3384 | 5345 | 1.7 | 0.72 | 0.005 | 0 | 0 |
72 | 2 | End | Endothelial cells | wk11 | ECSCR | 641700 | 35454 | 1.69 | 0.63 | 0.003 | 0 | 0 |
72 | 2 | End | Endothelial cells | wk11 | MEF2C | 4208 | 6996 | 1.64 | 0.72 | 0.03 | 2.26779463920152e-113 | 7.6411072573256e-109 |
72 | 2 | End | Endothelial cells | wk11 | KANK3 | 256949 | 24796 | 1.63 | 0.69 | 0.008 | 2.18404580777533e-296 | 7.35892394471818e-292 |
72 | 2 | End | Endothelial cells | wk11 | B2M | 567 | 914 | 1.62 | 1 | 0.63 | 7.17063663309178e-22 | 2.41607430715394e-17 |
72 | 2 | End | Endothelial cells | wk11 | PECAM1 | 5175 | 8823 | 1.61 | 0.69 | 0.002 | 0 | 0 |
72 | 2 | End | Endothelial cells | wk11 | TM4SF18 | 116441 | 25181 | 1.59 | 0.69 | 0.001 | 0 | 0 |
72 | 2 | End | Endothelial cells | wk11 | ESAM | 90952 | 17474 | 1.58 | 0.63 | 0.04 | 1.51260447235368e-64 | 5.09656950914848e-60 |
72 | 2 | End | Endothelial cells | wk11 | GMFG | 9535 | 4374 | 1.57 | 0.69 | 0.007 | 2.47975996974835e-306 | 8.35530324207011e-302 |
72 | 2 | End | Endothelial cells | wk11 | NTS | 4922 | 8038 | 1.56 | 0.38 | 0.002 | 2.14271839813651e-239 | 7.21967537068114e-235 |
72 | 2 | End | Endothelial cells | wk11 | COTL1 | 23406 | 18304 | 1.53 | 0.91 | 0.47 | 5.60942969582698e-19 | 1.89004124171194e-14 |
72 | 2 | End | Endothelial cells | wk11 | TCIM | 56892 | 1357 | 1.53 | 0.66 | 0.15 | 1.36233665102135e-20 | 4.59025711195134e-16 |
72 | 2 | End | Endothelial cells | wk11 | RNASE1 | 6035 | 10044 | 1.52 | 0.58 | 0.002 | 0 | 0 |
72 | 2 | End | Endothelial cells | wk11 | S100A16 | 140576 | 20441 | 1.52 | 0.77 | 0.26 | 2.48197588662709e-20 | 8.36276955240132e-16 |
72 | 2 | End | Endothelial cells | wk11 | S100A10 | 6281 | 10487 | 1.51 | 0.83 | 0.22 | 5.31907012706037e-25 | 1.79220748861172e-20 |
72 | 2 | End | Endothelial cells | wk11 | RBP5 | 83758 | 15847 | 1.51 | 0.66 | 0.01 | 3.00115565284059e-239 | 1.01120938566811e-234 |
72 | 2 | End | Endothelial cells | wk11 | HSPG2 | 3339 | 5273 | 1.5 | 0.69 | 0.08 | 1.61704095763905e-43 | 5.44845780266901e-39 |
72 | 2 | End | Endothelial cells | wk11 | CD93 | 22918 | 15855 | 1.5 | 0.66 | 0.001 | 0 | 0 |
72 | 2 | End | Endothelial cells | wk11 | TMSB10 | 9168 | 11879 | 1.49 | 1 | 0.91 | 9.71958434177035e-24 | 3.2749167481161e-19 |
72 | 2 | End | Endothelial cells | wk11 | SPTBN1 | 6711 | 11275 | 1.48 | 0.77 | 0.21 | 2.54743903550975e-23 | 8.58334108624656e-19 |
72 | 2 | End | Endothelial cells | wk11 | ITM2A | 9452 | 6173 | 1.46 | 0.72 | 0.03 | 2.94788312815178e-92 | 9.93259741199462e-88 |
72 | 2 | End | Endothelial cells | wk11 | GYPC | 2995 | 4704 | 1.42 | 0.88 | 0.32 | 2.18752363959901e-23 | 7.3706421512649e-19 |
72 | 2 | End | Endothelial cells | wk11 | THY1 | 7070 | 11801 | 1.42 | 0.61 | 0.06 | 5.06453073080915e-39 | 1.70644298443884e-34 |
72 | 2 | End | Endothelial cells | wk11 | CCL2 | 6347 | 10618 | 1.41 | 0.33 | 0.02 | 1.21871881726996e-36 | 4.10635118290941e-32 |
72 | 2 | End | Endothelial cells | wk11 | TIE1 | 7075 | 11809 | 1.4 | 0.58 | 0.003 | 0 | 0 |
72 | 2 | End | Endothelial cells | wk11 | CALM1 | 801 | 1442 | 1.4 | 0.94 | 0.64 | 3.59438154073722e-18 | 1.211090916336e-13 |
72 | 2 | End | Endothelial cells | wk11 | CRIP2 | 1397 | 2361 | 1.4 | 0.83 | 0.43 | 1.54690168057786e-13 | 5.21213052253905e-09 |
72 | 2 | End | Endothelial cells | wk11 | TMEM88 | 92162 | 32371 | 1.38 | 0.61 | 0.04 | 1.95232958870787e-58 | 6.57817931619228e-54 |
72 | 2 | End | Endothelial cells | wk11 | LINC00305 | 221241 | 28597 | 1.38 | 0.52 | 0.002 | 0 | 0 |
72 | 2 | End | Endothelial cells | wk11 | CCDC85B | 11007 | 24926 | 1.37 | 0.66 | 0.2 | 9.65889528995387e-17 | 3.25446817899706e-12 |
72 | 2 | End | Endothelial cells | wk11 | NRP2 | 8828 | 8005 | 1.36 | 0.66 | 0.14 | 1.06901979214462e-22 | 3.60195528765207e-18 |
72 | 2 | End | Endothelial cells | wk11 | HLA-E | 3133 | 4962 | 1.36 | 0.66 | 0.12 | 8.03105821761926e-26 | 2.70598475584463e-21 |
72 | 2 | End | Endothelial cells | wk11 | RHOC | 389 | 669 | 1.35 | 0.8 | 0.4 | 3.9031922935101e-16 | 1.31514161137529e-11 |
72 | 2 | End | Endothelial cells | wk11 | TFPI | 7035 | 11760 | 1.31 | 0.55 | 0.04 | 6.4977974901053e-49 | 2.18936788631608e-44 |
72 | 2 | End | Endothelial cells | wk11 | KDR | 3791 | 6307 | 1.3 | 0.58 | 0.004 | 0 | 0 |
72 | 2 | End | Endothelial cells | wk11 | CETP | 1071 | 1869 | 1.28 | 0.5 | 0.001 | 0 | 0 |
72 | 2 | End | Endothelial cells | wk11 | PLXND1 | 23129 | 9107 | 1.28 | 0.61 | 0.06 | 1.52750585748744e-44 | 5.14677823621818e-40 |
72 | 2 | End | Endothelial cells | wk11 | NOSTRIN | 115677 | 20203 | 1.24 | 0.47 | 0.006 | 5.49918307205335e-180 | 1.85289474429766e-175 |
72 | 2 | End | Endothelial cells | wk11 | CALCRL | 10203 | 16709 | 1.24 | 0.58 | 0.01 | 2.89783433136973e-128 | 9.76396299611716e-124 |
72 | 2 | End | Endothelial cells | wk11 | MSN | 4478 | 7373 | 1.23 | 0.8 | 0.23 | 4.40095854040774e-23 | 1.48285897060498e-18 |
72 | 2 | End | Endothelial cells | wk11 | A2M | 2 | 7 | 1.23 | 0.47 | 0.008 | 2.34752821423132e-147 | 7.90976156503099e-143 |
72 | 2 | End | Endothelial cells | wk11 | CYP26B1 | 56603 | 20581 | 1.22 | 0.41 | 0.006 | 7.49040169362413e-157 | 2.52381594664971e-152 |
72 | 2 | End | Endothelial cells | wk11 | SERPINH1 | 871 | 1546 | 1.22 | 0.91 | 0.67 | 1.7842359843404e-14 | 6.01180472563653e-10 |
72 | 2 | End | Endothelial cells | wk11 | FKBP1A | 2280 | 3711 | 1.21 | 0.97 | 0.78 | 4.76113235868608e-18 | 1.60421593693569e-13 |
72 | 2 | End | Endothelial cells | wk11 | GIMAP4 | 55303 | 21872 | 1.21 | 0.36 | 0.002 | 2.39699912517602e-225 | 8.07644885236808e-221 |
72 | 2 | End | Endothelial cells | wk11 | HLA-B | 3106 | 4932 | 1.2 | 0.41 | 0.09 | 1.41759734593236e-11 | 4.7764524973845e-07 |
72 | 2 | End | Endothelial cells | wk11 | MMRN2 | 79812 | 19888 | 1.15 | 0.5 | 0.001 | 0 | 0 |
72 | 2 | End | Endothelial cells | wk11 | ENG | 2022 | 3349 | 1.14 | 0.47 | 0.03 | 1.57190325522252e-49 | 5.29637082814677e-45 |
72 | 2 | End | Endothelial cells | wk11 | MYL12A | 10627 | 16701 | 1.14 | 1 | 0.76 | 3.52909802141884e-17 | 1.18909428733687e-12 |
72 | 2 | End | Endothelial cells | wk11 | IFI16 | 3428 | 5395 | 1.14 | 0.63 | 0.04 | 1.73539219073193e-58 | 5.84723044745215e-54 |
72 | 2 | End | Endothelial cells | wk11 | IGFBP5 | 3488 | 5474 | 1.14 | 0.61 | 0.12 | 1.01408846090148e-19 | 3.41686966016146e-15 |
72 | 2 | End | Endothelial cells | wk11 | LRRC32 | 2615 | 4161 | 1.14 | 0.36 | 0.008 | 1.69510013510278e-96 | 5.7114703952153e-92 |
72 | 2 | End | Endothelial cells | wk11 | PCAT19 | 100505495 | 49593 | 1.13 | 0.47 | 0.001 | 0 | 0 |
72 | 2 | End | Endothelial cells | wk11 | FN1 | 2335 | 3778 | 1.13 | 0.66 | 0.1 | 3.52858081752904e-28 | 1.18892002065823e-23 |
72 | 2 | End | Endothelial cells | wk11 | CAVIN1 | 284119 | 9688 | 1.13 | 0.44 | 0.03 | 8.52039115721695e-42 | 2.87086059651268e-37 |
72 | 2 | End | Endothelial cells | wk11 | PFN1 | 5216 | 8881 | 1.12 | 1 | 0.88 | 1.90807409887998e-17 | 6.4290648687662e-13 |
72 | 2 | End | Endothelial cells | wk11 | EMP1 | 2012 | 3333 | 1.11 | 0.52 | 0.06 | 4.98393590368216e-29 | 1.67928736338667e-24 |
72 | 2 | End | Endothelial cells | wk11 | ELK3 | 2004 | 3325 | 1.1 | 0.5 | 0.04 | 1.30504734440156e-39 | 4.39722652222663e-35 |
72 | 2 | End | Endothelial cells | wk11 | SDCBP | 6386 | 10662 | 1.1 | 0.83 | 0.49 | 2.97065344270095e-13 | 1.00093197098366e-08 |
72 | 2 | End | Endothelial cells | wk11 | GIMAP7 | 168537 | 22404 | 1.1 | 0.5 | 0.001 | 0 | 0 |
72 | 2 | End | Endothelial cells | wk11 | CLDN5 | 7122 | 2047 | 1.1 | 0.75 | 0.42 | 4.24864648247319e-08 | 0.00143153894580452 |
72 | 2 | End | Endothelial cells | wk11 | ADGRL4 | 64123 | 20822 | 1.1 | 0.41 | 0.001 | 8.93328845827092e-300 | 3.0099822131298e-295 |
72 | 2 | End | Endothelial cells | wk11 | NFIB | 4781 | 7785 | 1.09 | 0.61 | 0.06 | 5.6033619274888e-38 | 1.88799676784808e-33 |
72 | 2 | End | Endothelial cells | wk11 | PLPP3 | 8613 | 9229 | 1.08 | 0.86 | 0.3 | 3.49846156424475e-18 | 1.17877163945663e-13 |
72 | 2 | End | Endothelial cells | wk11 | MAP4K4 | 9448 | 6866 | 1.05 | 0.44 | 0.13 | 1.70657554972332e-09 | 5.75013565723775e-05 |
72 | 2 | End | Endothelial cells | wk11 | CLEC14A | 161198 | 19832 | 1.04 | 0.41 | 0.004 | 1.93894010226473e-182 | 6.53306478057077e-178 |
72 | 2 | End | Endothelial cells | wk11 | PCDH17 | 27253 | 14267 | 1.03 | 0.47 | 0.05 | 6.05882095694259e-28 | 2.04145913323224e-23 |
72 | 2 | End | Endothelial cells | wk11 | DUSP6 | 1848 | 3072 | 1.03 | 0.61 | 0.19 | 3.11840749828544e-13 | 1.05071622247229e-08 |
72 | 2 | End | Endothelial cells | wk11 | LUZP1 | 7798 | 14985 | 1.03 | 0.69 | 0.22 | 6.61096163470777e-16 | 2.22749741319843e-11 |
72 | 2 | End | Endothelial cells | wk11 | PMP22 | 5376 | 9118 | 1.02 | 0.61 | 0.13 | 7.1896791220418e-18 | 2.42249048338076e-13 |
72 | 2 | End | Endothelial cells | wk11 | CAV1 | 857 | 1527 | 1.02 | 0.52 | 0.01 | 3.22460688941101e-147 | 1.08649904531814e-142 |
72 | 2 | End | Endothelial cells | wk11 | CD74 | 972 | 1697 | 1.01 | 0.5 | 0.19 | 1.62745770652237e-08 | 0.000548355599635649 |
72 | 2 | End | Endothelial cells | wk11 | TMEM204 | 79652 | 14158 | 1.01 | 0.3 | 0.01 | 2.11612773570646e-40 | 7.13008079268934e-36 |
72 | 2 | End | Endothelial cells | wk11 | ARHGEF15 | 22899 | 15590 | 1.01 | 0.36 | 0.003 | 5.85392127106148e-177 | 1.97242023307146e-172 |
72 | 2 | End | Endothelial cells | wk11 | TPM3 | 7170 | 12012 | 0.99 | 0.83 | 0.55 | 3.30373927392419e-11 | 1.11316191095602e-06 |
72 | 2 | End | Endothelial cells | wk11 | LPAR6 | 10161 | 15520 | 0.99 | 0.47 | 0.09 | 1.77347666909811e-15 | 5.97555228885918e-11 |
72 | 2 | End | Endothelial cells | wk11 | CLIC4 | 25932 | 13518 | 0.98 | 0.66 | 0.32 | 4.31651186109001e-09 | 0.000145440550647567 |
72 | 2 | End | Endothelial cells | wk11 | MARCKS | 4082 | 6759 | 0.98 | 0.97 | 0.67 | 7.20447240740444e-12 | 2.42747493295085e-07 |
72 | 2 | End | Endothelial cells | wk11 | CCDC34 | 91057 | 25079 | 0.97 | 0.55 | 0.23 | 5.91889744137936e-08 | 0.00199431330389836 |
72 | 2 | End | Endothelial cells | wk11 | HLA-A | 3105 | 4931 | 0.96 | 0.8 | 0.47 | 7.37062285404017e-10 | 2.48345766444029e-05 |
72 | 2 | End | Endothelial cells | wk11 | COL4A1 | 1282 | 2202 | 0.96 | 0.55 | 0.29 | 1.46626789007097e-06 | 0.04 |
72 | 2 | End | Endothelial cells | wk11 | HSPA12B | 116835 | 16193 | 0.96 | 0.3 | 0.02 | 1.10467589665053e-28 | 3.72209496617428e-24 |
72 | 2 | End | Endothelial cells | wk11 | TMSB4X | 7114 | 11881 | 0.96 | 1 | 0.99 | 7.28944423190116e-17 | 2.45610533949678e-12 |
72 | 2 | End | Endothelial cells | wk11 | ADGRF5 | 221395 | 19030 | 0.95 | 0.33 | 0.001 | 1.26644498351342e-234 | 4.26715972745011e-230 |
72 | 2 | End | Endothelial cells | wk11 | RBP1 | 5947 | 9919 | 0.94 | 0.91 | 0.55 | 9.40376452340245e-12 | 3.16850441851522e-07 |
72 | 2 | End | Endothelial cells | wk11 | PIEZO2 | 63895 | 26270 | 0.94 | 0.36 | 0.007 | 2.04218881900738e-109 | 6.88095100676348e-105 |