Marker Genes
Dataset: Single-cell transcriptomics reveals gene expression dynamics of human fetal kidney development
- tissue: Kidney
- ontology: Kidney
- genotype: -
- stage: Fetal
- treatment condition: WT
- cell/nucleus: Cells
- pmid: 30789893
- subset name: wk11
- total genes: Not reported
- clustering: scran
- pseudotime: Monocle 2
- link: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE114530
Rows:100
dataset id | cluster id | cluster name | cell type name | sample id | gene symbol | entrez geneid | species specific geneid |
avg log fc (?)
|
pct 1 | pct 2 | p value | padj |
---|---|---|---|---|---|---|---|---|---|---|---|---|
72 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk11 | CCND1 | 595 | 1582 | 1.37 | 0.78 | 0.27 | 1.02280597377013e-114 | 3.44624244802107e-110 |
72 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk11 | CD24 | 100133941 | 1645 | 1.16 | 0.97 | 0.54 | 2.06217112626009e-96 | 6.94827939282074e-92 |
72 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk11 | HMGA1 | 3159 | 5010 | 1.06 | 0.97 | 0.63 | 2.81726670515815e-120 | 9.49249843635988e-116 |
72 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk11 | LIMCH1 | 22998 | 29191 | 1.04 | 0.44 | 0.08 | 3.94494345565967e-99 | 1.32920924794997e-94 |
72 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk11 | JAG1 | 182 | 6188 | 0.88 | 0.68 | 0.23 | 2.09384324209435e-83 | 7.0549954199127e-79 |
72 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk11 | TSPAN15 | 23555 | 23298 | 0.88 | 0.4 | 0.06 | 6.90658908703763e-109 | 2.32710612698646e-104 |
72 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk11 | TUBB2B | 347733 | 30829 | 0.84 | 0.85 | 0.38 | 2.70196560741916e-79 | 9.1040029176381e-75 |
72 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk11 | DKK1 | 22943 | 2891 | 0.81 | 0.26 | 0.04 | 3.18451759519779e-60 | 1.07299135852594e-55 |
72 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk11 | LHX1 | 3975 | 6593 | 0.78 | 0.59 | 0.16 | 1.27540140025036e-89 | 4.29733747800358e-85 |
72 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk11 | PAX8 | 7849 | 8622 | 0.78 | 0.86 | 0.33 | 1.75725272844491e-91 | 5.92088734322229e-87 |
72 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk11 | PLEKHA1 | 59338 | 14335 | 0.75 | 0.63 | 0.29 | 8.47003964226045e-48 | 2.85389515706324e-43 |
72 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk11 | SMS | 6611 | 11123 | 0.75 | 0.86 | 0.48 | 2.89318006306656e-61 | 9.74828090449645e-57 |
72 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk11 | SPON1 | 10418 | 11252 | 0.72 | 0.43 | 0.08 | 1.25222321770121e-90 | 4.21924090972247e-86 |
72 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk11 | EPCAM | 4072 | 11529 | 0.7 | 0.83 | 0.36 | 4.43488030032782e-71 | 1.49428856839245e-66 |
72 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk11 | DCDC2 | 51473 | 18141 | 0.7 | 0.61 | 0.19 | 1.25266479889065e-75 | 4.22072877338216e-71 |
72 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk11 | CADM1 | 23705 | 5951 | 0.69 | 0.86 | 0.45 | 7.00058170174902e-57 | 2.35877599858732e-52 |
72 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk11 | LDHB | 3945 | 6541 | 0.67 | 0.99 | 0.92 | 1.20751801454573e-93 | 4.06861119821039e-89 |
72 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk11 | MCM3 | 4172 | 6945 | 0.61 | 0.72 | 0.34 | 2.69121064882687e-50 | 9.06776516015725e-46 |
72 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk11 | FXYD6 | 53826 | 4030 | 0.61 | 0.76 | 0.31 | 1.39566525241571e-62 | 4.7025545014895e-58 |
72 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk11 | EMX2 | 2018 | 3341 | 0.61 | 0.56 | 0.18 | 1.327861182368e-64 | 4.47409546787076e-60 |
72 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk11 | PCNA | 5111 | 8729 | 0.61 | 0.65 | 0.36 | 1.41834417500456e-33 | 4.77896886326036e-29 |
72 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk11 | HES4 | 57801 | 24149 | 0.6 | 0.85 | 0.45 | 1.25519303819761e-51 | 4.22924742290302e-47 |
72 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk11 | PHGDH | 26227 | 8923 | 0.59 | 0.84 | 0.39 | 8.04229870589361e-63 | 2.70977212596379e-58 |
72 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk11 | GINS2 | 51659 | 24575 | 0.59 | 0.59 | 0.19 | 1.68150494180223e-64 | 5.66566275090843e-60 |
72 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk11 | PODXL2 | 50512 | 17936 | 0.59 | 0.54 | 0.18 | 7.35702588394594e-62 | 2.47887630133675e-57 |
72 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk11 | KRT18 | 3875 | 6430 | 0.59 | 0.68 | 0.27 | 3.38354530291438e-53 | 1.14005175436397e-48 |
72 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk11 | MGLL | 11343 | 17038 | 0.58 | 0.37 | 0.06 | 6.94377587069413e-90 | 2.33963584187168e-85 |
72 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk11 | PPA1 | 5464 | 9226 | 0.57 | 0.79 | 0.43 | 1.76140902619473e-49 | 5.93489157286054e-45 |
72 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk11 | HNF1B | 6928 | 11630 | 0.57 | 0.52 | 0.14 | 9.04189634153953e-69 | 3.04657655331833e-64 |
72 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk11 | RPSA | 3921 | 6502 | 0.57 | 1 | 0.96 | 4.38751271618113e-94 | 1.47832853459007e-89 |
72 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk11 | MCM7 | 4176 | 6950 | 0.57 | 0.73 | 0.35 | 1.62803490102648e-47 | 5.48550079551864e-43 |
72 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk11 | MAL | 4118 | 6817 | 0.56 | 0.41 | 0.07 | 5.35242997613729e-92 | 1.8034477561597e-87 |
72 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk11 | HSPD1 | 3329 | 5261 | 0.56 | 0.97 | 0.8 | 2.34101090633796e-63 | 7.88780214781513e-59 |
72 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk11 | CLU | 1191 | 2095 | 0.56 | 0.54 | 0.17 | 5.3674857892795e-60 | 1.80852066183984e-55 |
72 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk11 | HOXB8 | 3218 | 5119 | 0.55 | 0.47 | 0.13 | 1.04750247934918e-61 | 3.52945485391912e-57 |
72 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk11 | CALCA | 796 | 1437 | 0.55 | 0.26 | 0.05 | 3.57412910940065e-48 | 1.20426706212146e-43 |
72 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk11 | HLA-DMB | 3109 | 4935 | 0.53 | 0.34 | 0.07 | 1.71256575000684e-63 | 5.77031903807305e-59 |
72 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk11 | CSRP2 | 1466 | 2470 | 0.52 | 0.62 | 0.25 | 2.2745941331634e-48 | 7.66401747228078e-44 |
72 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk11 | ENO1 | 2023 | 3350 | 0.52 | 0.98 | 0.79 | 1.79460078687885e-55 | 6.04672789130961e-51 |
72 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk11 | MITF | 4286 | 7105 | 0.51 | 0.37 | 0.11 | 2.06668307385508e-44 | 6.9634819490473e-40 |
72 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk11 | SINHCAF | 58516 | 30702 | 0.51 | 0.86 | 0.54 | 4.23037110652201e-41 | 1.42538124063153e-36 |
72 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk11 | CXCR4 | 7852 | 2561 | 0.51 | 0.39 | 0.13 | 7.61383218968499e-38 | 2.56540461799246e-33 |
72 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk11 | CENPV | 201161 | 29920 | 0.5 | 0.75 | 0.39 | 2.68692228250694e-41 | 9.05331593867889e-37 |
72 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk11 | KRT8 | 3856 | 6446 | 0.5 | 0.59 | 0.23 | 7.09930267559014e-48 | 2.39203904351334e-43 |
72 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk11 | WFDC2 | 10406 | 15939 | 0.5 | 0.49 | 0.17 | 1.55920917823126e-46 | 5.2535994051324e-42 |
72 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk11 | APEX1 | 328 | 587 | 0.5 | 0.96 | 0.72 | 1.22456483096873e-53 | 4.12604874146603e-49 |
72 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk11 | MECOM | 2122 | 3498 | 0.49 | 0.24 | 0.04 | 2.00945927173701e-48 | 6.77067207019069e-44 |
72 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk11 | MYC | 4609 | 7553 | 0.49 | 0.6 | 0.23 | 7.89972618153908e-49 | 2.66173373960778e-44 |
72 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk11 | HOXB2 | 3212 | 5113 | 0.48 | 0.58 | 0.29 | 3.85260356263575e-32 | 1.29809624439449e-27 |
72 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk11 | HEY1 | 23462 | 4880 | 0.48 | 0.61 | 0.25 | 2.30747128819801e-41 | 7.77479375845438e-37 |
72 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk11 | DNER | 92737 | 24456 | 0.48 | 0.31 | 0.05 | 1.98001089958976e-78 | 6.67144872507773e-74 |
72 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk11 | TSPAN12 | 23554 | 21641 | 0.47 | 0.7 | 0.37 | 6.3572913784691e-33 | 2.14202575706138e-28 |
72 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk11 | MSRB1 | 51734 | 14133 | 0.47 | 0.66 | 0.3 | 3.99125335644345e-40 | 1.34481290592006e-35 |
72 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk11 | PAICS | 10606 | 8587 | 0.47 | 0.73 | 0.39 | 5.60531771419036e-37 | 1.8886557506193e-32 |
72 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk11 | CYS1 | 192668 | 18525 | 0.47 | 0.36 | 0.09 | 1.10315309648091e-50 | 3.71696404328277e-46 |
72 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk11 | RPLP0 | 6175 | 10371 | 0.47 | 1 | 0.98 | 3.51981558132439e-77 | 1.18596666197144e-72 |
72 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk11 | UHRF1 | 29128 | 12556 | 0.46 | 0.48 | 0.2 | 8.09848926825605e-32 | 2.7287049740462e-27 |
72 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk11 | RPS2 | 6187 | 10404 | 0.46 | 1 | 0.99 | 1.5799678141027e-89 | 5.32354355283765e-85 |
72 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk11 | BEX1 | 55859 | 1036 | 0.46 | 0.49 | 0.23 | 3.85628926425321e-29 | 1.29933810469748e-24 |
72 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk11 | TMSB15A | 11013 | 30744 | 0.46 | 0.71 | 0.29 | 2.17713590921263e-47 | 7.33564173250103e-43 |
72 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk11 | ODC1 | 4953 | 8109 | 0.45 | 0.91 | 0.7 | 1.28110602889964e-30 | 4.31655865377445e-26 |
72 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk11 | LINC02381 | 400043 | 53304 | 0.45 | 0.39 | 0.15 | 5.71139446470406e-30 | 1.92439725093739e-25 |
72 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk11 | IDH2 | 3418 | 5383 | 0.44 | 0.8 | 0.44 | 3.04681580324992e-39 | 1.02659411674703e-34 |
72 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk11 | MDK | 4192 | 6972 | 0.44 | 1 | 0.8 | 1.55386097910016e-42 | 5.23557918298007e-38 |
72 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk11 | EEF1B2 | 1933 | 3208 | 0.44 | 0.98 | 0.81 | 1.46881939053602e-49 | 4.94904005447207e-45 |
72 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk11 | GNG11 | 2791 | 4403 | 0.44 | 0.4 | 0.14 | 1.96560783463924e-37 | 6.62291903803346e-33 |
72 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk11 | LIPC | 3990 | 6619 | 0.44 | 0.25 | 0.04 | 8.36255539147061e-59 | 2.81767941360211e-54 |
72 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk11 | CLDN7 | 1366 | 2049 | 0.44 | 0.38 | 0.11 | 5.32412063394595e-45 | 1.79390920640175e-40 |
72 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk11 | LHX1-DT | 102723471 | 53778 | 0.44 | 0.4 | 0.09 | 3.10939992665355e-68 | 1.04768121128665e-63 |
72 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk11 | RBM47 | 54502 | 30358 | 0.43 | 0.48 | 0.19 | 1.25409345430576e-35 | 4.22554248493783e-31 |
72 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk11 | FBL | 2091 | 3599 | 0.43 | 0.78 | 0.49 | 4.0383898750742e-31 | 1.3606950845075e-26 |
72 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk11 | MCM4 | 4173 | 6947 | 0.43 | 0.46 | 0.17 | 2.0221180660046e-39 | 6.81332461159588e-35 |
72 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk11 | YBX1 | 4904 | 8014 | 0.43 | 0.99 | 0.95 | 1.97115185628815e-60 | 6.64159906457729e-56 |
72 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk11 | AKR1B1 | 231 | 381 | 0.42 | 0.68 | 0.39 | 3.79384139671818e-29 | 1.27829692021022e-24 |
72 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk11 | TKT | 7086 | 11834 | 0.42 | 0.75 | 0.43 | 2.91535204227615e-31 | 9.82298717124527e-27 |
72 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk11 | HMGA2 | 8091 | 5009 | 0.42 | 0.79 | 0.46 | 7.26326385827639e-33 | 2.44728412440765e-28 |
72 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk11 | BASP1 | 10409 | 957 | 0.42 | 0.66 | 0.33 | 4.53724600511233e-33 | 1.52877966896255e-28 |
72 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk11 | GALNT14 | 79623 | 22946 | 0.42 | 0.29 | 0.06 | 4.27242798107818e-56 | 1.43955188394448e-51 |
72 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk11 | RANBP1 | 5902 | 9847 | 0.41 | 0.93 | 0.73 | 1.32476758017817e-30 | 4.46367188465231e-26 |
72 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk11 | PAX2 | 5076 | 8616 | 0.41 | 0.69 | 0.37 | 1.01962539315858e-30 | 3.43552579970852e-26 |
72 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk11 | ACAA2 | 10449 | 83 | 0.41 | 0.68 | 0.37 | 3.4283214986492e-30 | 1.15513864575486e-25 |
72 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk11 | KDM2B | 84678 | 13610 | 0.41 | 0.41 | 0.19 | 1.08536160313437e-22 | 3.65701738560094e-18 |
72 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk11 | CDK4 | 1019 | 1773 | 0.41 | 0.8 | 0.55 | 1.9856244567556e-28 | 6.69036304459232e-24 |
72 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk11 | NME1 | 4830 | 7849 | 0.41 | 0.8 | 0.52 | 4.58478388332712e-27 | 1.54479708164824e-22 |
72 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk11 | DPP4 | 1803 | 3009 | 0.4 | 0.39 | 0.14 | 1.18084506133359e-30 | 3.97873934965739e-26 |
72 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk11 | HOXB6 | 3216 | 5117 | 0.4 | 0.41 | 0.16 | 6.98395395485704e-31 | 2.35317344554953e-26 |
72 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk11 | LMNB1 | 4001 | 6637 | 0.4 | 0.59 | 0.26 | 5.88446603238948e-33 | 1.98271198495331e-28 |
72 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk11 | MCM5 | 4174 | 6948 | 0.4 | 0.44 | 0.18 | 3.97217424929063e-30 | 1.33838439155599e-25 |
72 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk11 | C19orf48 | 84798 | 29667 | 0.4 | 0.63 | 0.36 | 9.79597246379904e-24 | 3.30065496195245e-19 |
72 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk11 | MCM2 | 4171 | 6944 | 0.4 | 0.5 | 0.18 | 1.01006448609794e-42 | 3.40331127945839e-38 |
72 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk11 | HOXB7 | 3217 | 5118 | 0.39 | 0.53 | 0.25 | 1.57722586427857e-29 | 5.31430482710021e-25 |
72 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk11 | DSP | 1832 | 3052 | 0.39 | 0.43 | 0.16 | 9.19446549188798e-33 | 3.09798320283673e-28 |
72 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk11 | PTGR1 | 22949 | 18429 | 0.39 | 0.62 | 0.43 | 9.83531600878387e-14 | 3.31391137599964e-09 |
72 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk11 | VAV3 | 10451 | 12659 | 0.39 | 0.32 | 0.1 | 5.95294651251603e-33 | 2.00578579792715e-28 |
72 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk11 | ID1 | 3397 | 5360 | 0.39 | 0.86 | 0.66 | 1.77029694817674e-21 | 5.9648385371867e-17 |
72 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk11 | ADAMTS1 | 9510 | 217 | 0.39 | 0.48 | 0.23 | 4.31599639740252e-24 | 1.45423182614081e-19 |
72 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk11 | UNG | 7374 | 12572 | 0.39 | 0.53 | 0.27 | 9.52167819039839e-26 | 3.20823424947283e-21 |
72 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk11 | DKC1 | 1736 | 2890 | 0.39 | 0.57 | 0.27 | 9.70073881498877e-32 | 3.26856693632232e-27 |
72 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk11 | HNRNPM | 4670 | 5046 | 0.38 | 0.96 | 0.81 | 1.07628395717024e-32 | 3.62643116528939e-28 |
72 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk11 | DUSP6 | 1848 | 3072 | 0.38 | 0.41 | 0.18 | 1.93799675578789e-24 | 6.5298862689517e-20 |