Marker Genes
Dataset: Single-cell transcriptomics reveals gene expression dynamics of human fetal kidney development
- tissue: Kidney
- ontology: Kidney
- genotype: -
- stage: Fetal
- treatment condition: WT
- cell/nucleus: Cells
- pmid: 30789893
- subset name: wk11
- total genes: Not reported
- clustering: scran
- pseudotime: Monocle 2
- link: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE114530
Rows:100
| dataset id | cluster id | cluster name | cell type name | sample id | gene symbol | entrez geneid | species specific geneid |
avg log fc (?)
|
pct 1 | pct 2 | p value | padj |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 72 | 15 | PTA | Pretubular aggregate | wk11 | UBE2C | 11065 | 15937 | 1.44 | 0.73 | 0.09 | 4.8156712941972E-214 | 1.6225922858668E-209 |
| 72 | 15 | PTA | Pretubular aggregate | wk11 | HMGB2 | 3148 | 5000 | 1.44 | 0.99 | 0.45 | 3.1182003175281E-146 | 1.0506464149879E-141 |
| 72 | 15 | PTA | Pretubular aggregate | wk11 | TOP2A | 7153 | 11989 | 1.41 | 0.79 | 0.09 | 3.013818178986E-249 | 1.0154758972275E-244 |
| 72 | 15 | PTA | Pretubular aggregate | wk11 | CCND1 | 595 | 1582 | 1.33 | 0.84 | 0.27 | 1.3492764794073E-111 | 4.5462521697151E-107 |
| 72 | 15 | PTA | Pretubular aggregate | wk11 | TUBA1B | 10376 | 18809 | 1.21 | 1 | 0.88 | 6.5800876782309E-136 | 2.2170947423031E-131 |
| 72 | 15 | PTA | Pretubular aggregate | wk11 | HMGA1 | 3159 | 5010 | 1.18 | 1 | 0.63 | 5.2555444829914E-136 | 1.7708031580991E-131 |
| 72 | 15 | PTA | Pretubular aggregate | wk11 | PTTG1 | 9232 | 9690 | 1.16 | 0.83 | 0.19 | 3.0826971505628E-158 | 1.0386839779106E-153 |
| 72 | 15 | PTA | Pretubular aggregate | wk11 | MAD2L1 | 4085 | 6763 | 1.14 | 0.9 | 0.18 | 2.2294906483188E-200 | 7.5120457904455E-196 |
| 72 | 15 | PTA | Pretubular aggregate | wk11 | BIRC5 | 332 | 593 | 1.13 | 0.79 | 0.09 | 1.4342357590784E-238 | 4.8325139666386E-234 |
| 72 | 15 | PTA | Pretubular aggregate | wk11 | CENPF | 1063 | 1857 | 1.12 | 0.74 | 0.09 | 2.2352746546716E-227 | 7.5315344214505E-223 |
| 72 | 15 | PTA | Pretubular aggregate | wk11 | H2AFZ | 3015 | 4741 | 1.11 | 1 | 0.84 | 1.39708460021E-134 | 4.7073368519477E-130 |
| 72 | 15 | PTA | Pretubular aggregate | wk11 | TYMS | 7298 | 12441 | 1.11 | 0.94 | 0.21 | 4.3153515411541E-177 | 1.4540145482765E-172 |
| 72 | 15 | PTA | Pretubular aggregate | wk11 | NUSAP1 | 51203 | 18538 | 1.08 | 0.8 | 0.11 | 7.458593092259E-222 | 2.5130983565057E-217 |
| 72 | 15 | PTA | Pretubular aggregate | wk11 | CDK1 | 983 | 1722 | 1.07 | 0.78 | 0.09 | 2.3430212992841E-241 | 7.8945759658079E-237 |
| 72 | 15 | PTA | Pretubular aggregate | wk11 | CCNB1 | 891 | 1579 | 1.07 | 0.62 | 0.1 | 2.2277988667404E-143 | 7.5063455015952E-139 |
| 72 | 15 | PTA | Pretubular aggregate | wk11 | CKS1B | 1163 | 19083 | 1.05 | 0.93 | 0.34 | 5.2846988141071E-126 | 1.7806264184252E-121 |
| 72 | 15 | PTA | Pretubular aggregate | wk11 | KPNA2 | 3838 | 6395 | 1.03 | 0.83 | 0.37 | 3.6113412912007E-65 | 1.2168053346572E-60 |
| 72 | 15 | PTA | Pretubular aggregate | wk11 | CDC20 | 991 | 1723 | 1.02 | 0.56 | 0.06 | 1.4849061129757E-174 | 5.0032426570604E-170 |
| 72 | 15 | PTA | Pretubular aggregate | wk11 | CALCA | 796 | 1437 | 1.01 | 0.53 | 0.04 | 3.1888244883614E-222 | 1.0744425231085E-217 |
| 72 | 15 | PTA | Pretubular aggregate | wk11 | SMC4 | 10051 | 14013 | 1 | 0.9 | 0.25 | 1.7484258160793E-146 | 5.8911459446975E-142 |
| 72 | 15 | PTA | Pretubular aggregate | wk11 | CCNB2 | 9133 | 1580 | 0.99 | 0.68 | 0.11 | 9.9806851643134E-163 | 3.3628920592638E-158 |
| 72 | 15 | PTA | Pretubular aggregate | wk11 | PCLAF | 9768 | 28961 | 0.98 | 0.93 | 0.27 | 5.945222733379E-128 | 2.0031833477847E-123 |
| 72 | 15 | PTA | Pretubular aggregate | wk11 | RRM2 | 6241 | 10452 | 0.97 | 0.77 | 0.08 | 2.5216321039037E-255 | 8.4963872108932E-251 |
| 72 | 15 | PTA | Pretubular aggregate | wk11 | AURKB | 9212 | 11390 | 0.97 | 0.66 | 0.06 | 2.9583286479931E-240 | 9.9677925465479E-236 |
| 72 | 15 | PTA | Pretubular aggregate | wk11 | TK1 | 7083 | 11830 | 0.95 | 0.82 | 0.11 | 1.6352287643627E-229 | 5.5097397986436E-225 |
| 72 | 15 | PTA | Pretubular aggregate | wk11 | CKS2 | 1164 | 2000 | 0.93 | 0.88 | 0.3 | 2.6956303615122E-104 | 9.0826569400792E-100 |
| 72 | 15 | PTA | Pretubular aggregate | wk11 | PAX8 | 7849 | 8622 | 0.92 | 0.93 | 0.33 | 6.8562385982742E-110 | 2.3101410333025E-105 |
| 72 | 15 | PTA | Pretubular aggregate | wk11 | ZWINT | 11130 | 13195 | 0.92 | 0.87 | 0.17 | 5.0376883400178E-172 | 1.6973987092856E-167 |
| 72 | 15 | PTA | Pretubular aggregate | wk11 | LHX1 | 3975 | 6593 | 0.92 | 0.73 | 0.15 | 9.772685409616E-132 | 3.292808621916E-127 |
| 72 | 15 | PTA | Pretubular aggregate | wk11 | MCM7 | 4176 | 6950 | 0.9 | 0.93 | 0.34 | 1.3167225936154E-104 | 4.4365651069276E-100 |
| 72 | 15 | PTA | Pretubular aggregate | wk11 | PCNA | 5111 | 8729 | 0.9 | 0.89 | 0.35 | 4.0813444123423E-87 | 1.3751681862946E-82 |
| 72 | 15 | PTA | Pretubular aggregate | wk11 | PBK | 55872 | 18282 | 0.9 | 0.72 | 0.07 | 2.49690813344E-248 | 8.4130822648128E-244 |
| 72 | 15 | PTA | Pretubular aggregate | wk11 | MKI67 | 4288 | 7107 | 0.89 | 0.66 | 0.07 | 9.9051327706467E-221 | 3.3374354357417E-216 |
| 72 | 15 | PTA | Pretubular aggregate | wk11 | KRT18 | 3875 | 6430 | 0.87 | 0.76 | 0.27 | 3.6114201601965E-78 | 1.2168319087766E-73 |
| 72 | 15 | PTA | Pretubular aggregate | wk11 | UBE2T | 29089 | 25009 | 0.87 | 0.81 | 0.13 | 7.5647694147367E-190 | 2.5488734066014E-185 |
| 72 | 15 | PTA | Pretubular aggregate | wk11 | TMSB15A | 11013 | 30744 | 0.87 | 0.93 | 0.28 | 8.8722330433791E-117 | 2.9894102016362E-112 |
| 72 | 15 | PTA | Pretubular aggregate | wk11 | CCNA2 | 890 | 1578 | 0.85 | 0.69 | 0.06 | 1.9552123136945E-258 | 6.5878923697623E-254 |
| 72 | 15 | PTA | Pretubular aggregate | wk11 | HES4 | 57801 | 24149 | 0.83 | 0.88 | 0.45 | 3.6411299444113E-70 | 1.22684232347E-65 |
| 72 | 15 | PTA | Pretubular aggregate | wk11 | HMGB1 | 3146 | 4983 | 0.83 | 1 | 0.97 | 3.4357480658187E-116 | 1.1576409532969E-111 |
| 72 | 15 | PTA | Pretubular aggregate | wk11 | H2AFX | 3014 | 4739 | 0.83 | 0.78 | 0.21 | 5.6816986915112E-108 | 1.9143915571178E-103 |
| 72 | 15 | PTA | Pretubular aggregate | wk11 | PIMREG | 54478 | 25483 | 0.81 | 0.61 | 0.07 | 9.7567171372399E-186 | 3.2874282722216E-181 |
| 72 | 15 | PTA | Pretubular aggregate | wk11 | TUBB2B | 347733 | 30829 | 0.8 | 0.87 | 0.38 | 6.243011440352E-70 | 2.1035202747122E-65 |
| 72 | 15 | PTA | Pretubular aggregate | wk11 | LYPD1 | 116372 | 28431 | 0.8 | 0.74 | 0.29 | 2.7542236695353E-58 | 9.2800812321324E-54 |
| 72 | 15 | PTA | Pretubular aggregate | wk11 | RANBP1 | 5902 | 9847 | 0.78 | 0.99 | 0.73 | 8.1884207760032E-102 | 2.7590064962665E-97 |
| 72 | 15 | PTA | Pretubular aggregate | wk11 | JAG1 | 182 | 6188 | 0.78 | 0.77 | 0.23 | 8.0025660663042E-92 | 2.6963846103805E-87 |
| 72 | 15 | PTA | Pretubular aggregate | wk11 | TUBA1C | 84790 | 20768 | 0.77 | 0.63 | 0.2 | 8.3556255636108E-66 | 2.815344477403E-61 |
| 72 | 15 | PTA | Pretubular aggregate | wk11 | CENPV | 201161 | 29920 | 0.77 | 0.93 | 0.38 | 2.9764465380401E-85 | 1.0028838965272E-80 |
| 72 | 15 | PTA | Pretubular aggregate | wk11 | NUF2 | 83540 | 14621 | 0.77 | 0.62 | 0.05 | 2.393550573548E-254 | 8.0648293025127E-250 |
| 72 | 15 | PTA | Pretubular aggregate | wk11 | CADM1 | 23705 | 5951 | 0.77 | 0.93 | 0.45 | 3.3629325683026E-65 | 1.1331064995639E-60 |
| 72 | 15 | PTA | Pretubular aggregate | wk11 | HIST1H4C | 8364 | 4787 | 0.77 | 0.59 | 0.13 | 4.314493314126E-96 | 1.4537253772616E-91 |
| 72 | 15 | PTA | Pretubular aggregate | wk11 | TUBB | 203068 | 20778 | 0.76 | 1 | 0.96 | 4.4618861610014E-107 | 1.5033879230878E-102 |
| 72 | 15 | PTA | Pretubular aggregate | wk11 | LMNB1 | 4001 | 6637 | 0.75 | 0.91 | 0.25 | 1.33292968394E-123 | 4.4911732770673E-119 |
| 72 | 15 | PTA | Pretubular aggregate | wk11 | PRC1 | 9055 | 9341 | 0.75 | 0.64 | 0.07 | 2.7055857179144E-193 | 9.1162005179406E-189 |
| 72 | 15 | PTA | Pretubular aggregate | wk11 | GGH | 8836 | 4248 | 0.75 | 0.86 | 0.24 | 8.38506283949E-117 | 2.8252630731378E-112 |
| 72 | 15 | PTA | Pretubular aggregate | wk11 | TPX2 | 22974 | 1249 | 0.74 | 0.59 | 0.06 | 2.3237637978807E-179 | 7.8296897405792E-175 |
| 72 | 15 | PTA | Pretubular aggregate | wk11 | DTYMK | 1841 | 3061 | 0.73 | 0.84 | 0.29 | 1.5819165544421E-89 | 5.3301096385372E-85 |
| 72 | 15 | PTA | Pretubular aggregate | wk11 | ANP32E | 81611 | 16673 | 0.72 | 0.9 | 0.33 | 2.4648069288445E-86 | 8.3049204660486E-82 |
| 72 | 15 | PTA | Pretubular aggregate | wk11 | FEN1 | 2237 | 3650 | 0.71 | 0.7 | 0.16 | 6.3159933818148E-106 | 2.1281108100687E-101 |
| 72 | 15 | PTA | Pretubular aggregate | wk11 | HMGB3 | 3149 | 5004 | 0.71 | 0.9 | 0.37 | 5.6088330103037E-77 | 1.8898401944917E-72 |
| 72 | 15 | PTA | Pretubular aggregate | wk11 | PLK1 | 5347 | 9077 | 0.71 | 0.39 | 0.03 | 2.3734230513342E-143 | 7.9970116291653E-139 |
| 72 | 15 | PTA | Pretubular aggregate | wk11 | HMGN2 | 3151 | 4986 | 0.7 | 0.99 | 0.91 | 1.0920357265028E-87 | 3.6795051768784E-83 |
| 72 | 15 | PTA | Pretubular aggregate | wk11 | H2AFY | 9555 | 4740 | 0.69 | 0.97 | 0.64 | 5.0512410505145E-77 | 1.7019651595604E-72 |
| 72 | 15 | PTA | Pretubular aggregate | wk11 | RRM1 | 6240 | 10451 | 0.68 | 0.78 | 0.21 | 2.6408446108778E-105 | 8.8980618318917E-101 |
| 72 | 15 | PTA | Pretubular aggregate | wk11 | HEY1 | 23462 | 4880 | 0.68 | 0.69 | 0.25 | 2.8177878934264E-60 | 9.4942545281108E-56 |
| 72 | 15 | PTA | Pretubular aggregate | wk11 | FXYD6 | 53826 | 4030 | 0.68 | 0.89 | 0.31 | 4.6794199899689E-89 | 1.5766837714201E-84 |
| 72 | 15 | PTA | Pretubular aggregate | wk11 | RAN | 5901 | 9846 | 0.68 | 1 | 0.87 | 1.085713105189E-97 | 3.6582017366238E-93 |
| 72 | 15 | PTA | Pretubular aggregate | wk11 | TACC3 | 10460 | 11524 | 0.68 | 0.6 | 0.07 | 1.7185762170035E-166 | 5.7905707055716E-162 |
| 72 | 15 | PTA | Pretubular aggregate | wk11 | UBE2S | 27338 | 17895 | 0.68 | 0.69 | 0.22 | 7.0004252846287E-65 | 2.3587232954028E-60 |
| 72 | 15 | PTA | Pretubular aggregate | wk11 | CENPM | 79019 | 18352 | 0.68 | 0.65 | 0.09 | 1.7687791459837E-167 | 5.9597244544774E-163 |
| 72 | 15 | PTA | Pretubular aggregate | wk11 | GINS2 | 51659 | 24575 | 0.67 | 0.69 | 0.19 | 5.2784696228505E-83 | 1.7785275547232E-78 |
| 72 | 15 | PTA | Pretubular aggregate | wk11 | TMPO | 7112 | 11875 | 0.67 | 0.86 | 0.29 | 2.0320599423381E-84 | 6.8468227697139E-80 |
| 72 | 15 | PTA | Pretubular aggregate | wk11 | PKM | 5315 | 9021 | 0.67 | 0.99 | 0.81 | 3.3545241329845E-80 | 1.1302733613678E-75 |
| 72 | 15 | PTA | Pretubular aggregate | wk11 | DUT | 1854 | 3078 | 0.66 | 0.91 | 0.57 | 1.5807978944999E-39 | 5.3263404257278E-35 |
| 72 | 15 | PTA | Pretubular aggregate | wk11 | CDCA8 | 55143 | 14629 | 0.66 | 0.55 | 0.05 | 6.4820707952579E-205 | 2.1840689337542E-200 |
| 72 | 15 | PTA | Pretubular aggregate | wk11 | ARL6IP1 | 23204 | 697 | 0.65 | 0.88 | 0.66 | 5.8704913889032E-16 | 1.978003368577E-11 |
| 72 | 15 | PTA | Pretubular aggregate | wk11 | ID1 | 3397 | 5360 | 0.65 | 0.95 | 0.66 | 1.7211444197086E-49 | 5.7992240077663E-45 |
| 72 | 15 | PTA | Pretubular aggregate | wk11 | DHFR | 1719 | 2861 | 0.65 | 0.7 | 0.17 | 1.8023425154789E-99 | 6.0728128716546E-95 |
| 72 | 15 | PTA | Pretubular aggregate | wk11 | KIF22 | 3835 | 6391 | 0.65 | 0.73 | 0.19 | 4.5105445776175E-94 | 1.5197828899824E-89 |
| 72 | 15 | PTA | Pretubular aggregate | wk11 | CDCA5 | 113130 | 14626 | 0.65 | 0.64 | 0.06 | 1.0915033525019E-209 | 3.6777113959198E-205 |
| 72 | 15 | PTA | Pretubular aggregate | wk11 | PSRC1 | 84722 | 24472 | 0.65 | 0.42 | 0.05 | 1.6228619749808E-113 | 5.4680711385004E-109 |
| 72 | 15 | PTA | Pretubular aggregate | wk11 | CXCR4 | 7852 | 2561 | 0.64 | 0.6 | 0.12 | 2.2274126643711E-98 | 7.5050442313321E-94 |
| 72 | 15 | PTA | Pretubular aggregate | wk11 | PHGDH | 26227 | 8923 | 0.64 | 0.9 | 0.39 | 3.3446859834599E-70 | 1.126958495267E-65 |
| 72 | 15 | PTA | Pretubular aggregate | wk11 | KDM2B | 84678 | 13610 | 0.64 | 0.61 | 0.18 | 4.8607694958172E-64 | 1.6377876739206E-59 |
| 72 | 15 | PTA | Pretubular aggregate | wk11 | MYC | 4609 | 7553 | 0.64 | 0.7 | 0.22 | 9.7166340964537E-68 | 3.2739226924591E-63 |
| 72 | 15 | PTA | Pretubular aggregate | wk11 | CDKN3 | 1033 | 1791 | 0.63 | 0.52 | 0.05 | 1.6376344077053E-171 | 5.5178453733222E-167 |
| 72 | 15 | PTA | Pretubular aggregate | wk11 | SNRPB | 6628 | 11153 | 0.63 | 0.98 | 0.7 | 2.0724113738395E-73 | 6.9827828830148E-69 |
| 72 | 15 | PTA | Pretubular aggregate | wk11 | IDH2 | 3418 | 5383 | 0.62 | 0.93 | 0.44 | 7.3293683423565E-69 | 2.4695573692736E-64 |
| 72 | 15 | PTA | Pretubular aggregate | wk11 | DEK | 7913 | 2768 | 0.62 | 0.97 | 0.58 | 6.2239643119234E-70 | 2.0971025352595E-65 |
| 72 | 15 | PTA | Pretubular aggregate | wk11 | SFRP2 | 6423 | 10777 | 0.62 | 0.37 | 0.04 | 2.4114458755399E-114 | 8.1251257330442E-110 |
| 72 | 15 | PTA | Pretubular aggregate | wk11 | MCM3 | 4172 | 6945 | 0.62 | 0.82 | 0.34 | 5.677179680706E-55 | 1.9128689216171E-50 |
| 72 | 15 | PTA | Pretubular aggregate | wk11 | PIF1 | 80119 | 26220 | 0.62 | 0.31 | 0.02 | 7.7912172529047E-144 | 2.6251727411937E-139 |
| 72 | 15 | PTA | Pretubular aggregate | wk11 | ORC6 | 23594 | 17151 | 0.61 | 0.7 | 0.13 | 3.4186828316382E-129 | 1.1518909932922E-124 |
| 72 | 15 | PTA | Pretubular aggregate | wk11 | CENPA | 1058 | 1851 | 0.61 | 0.4 | 0.03 | 2.1400786060173E-155 | 7.2107808551148E-151 |
| 72 | 15 | PTA | Pretubular aggregate | wk11 | ENO1 | 2023 | 3350 | 0.61 | 0.99 | 0.79 | 1.4526864264494E-67 | 4.8946816452786E-63 |
| 72 | 15 | PTA | Pretubular aggregate | wk11 | HSPD1 | 3329 | 5261 | 0.61 | 0.99 | 0.8 | 5.7719018642186E-64 | 1.9447846141298E-59 |
| 72 | 15 | PTA | Pretubular aggregate | wk11 | LDHA | 3939 | 6535 | 0.6 | 0.95 | 0.58 | 1.0334422612256E-49 | 3.4820803549737E-45 |
| 72 | 15 | PTA | Pretubular aggregate | wk11 | CENPU | 79682 | 21348 | 0.6 | 0.66 | 0.11 | 1.9949634075304E-136 | 6.721829705333E-132 |
| 72 | 15 | PTA | Pretubular aggregate | wk11 | CDCA3 | 83461 | 14624 | 0.6 | 0.41 | 0.03 | 8.376449912614E-144 | 2.8223610335562E-139 |
| 72 | 15 | PTA | Pretubular aggregate | wk11 | BUB3 | 9184 | 1151 | 0.6 | 0.82 | 0.4 | 5.1816496651935E-50 | 1.7459050381903E-45 |
| 72 | 15 | PTA | Pretubular aggregate | wk11 | DNAJC9 | 23234 | 19123 | 0.6 | 0.76 | 0.23 | 5.0571842602068E-80 | 1.7039676646341E-75 |