Marker Genes
Dataset: Single-cell transcriptomics reveals gene expression dynamics of human fetal kidney development
- tissue: Kidney
- ontology: Kidney
- genotype: -
- stage: Fetal
- treatment condition: WT
- cell/nucleus: Cells
- pmid: 30789893
- subset name: wk11
- total genes: Not reported
- clustering: scran
- pseudotime: Monocle 2
- link: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE114530
Rows:100
dataset id | cluster id | cluster name | cell type name | sample id | gene symbol | entrez geneid | species specific geneid |
avg log fc (?)
|
pct 1 | pct 2 | p value | padj |
---|---|---|---|---|---|---|---|---|---|---|---|---|
72 | 15 | PTA | Pretubular aggregate | wk11 | UBE2C | 11065 | 15937 | 1.44 | 0.73 | 0.09 | 4.81567129419717e-214 | 1.62259228586679e-209 |
72 | 15 | PTA | Pretubular aggregate | wk11 | HMGB2 | 3148 | 5000 | 1.44 | 0.99 | 0.45 | 3.11820031752813e-146 | 1.05064641498793e-141 |
72 | 15 | PTA | Pretubular aggregate | wk11 | TOP2A | 7153 | 11989 | 1.41 | 0.79 | 0.09 | 3.01381817898596e-249 | 1.01547589722753e-244 |
72 | 15 | PTA | Pretubular aggregate | wk11 | CCND1 | 595 | 1582 | 1.33 | 0.84 | 0.27 | 1.34927647940733e-111 | 4.54625216971507e-107 |
72 | 15 | PTA | Pretubular aggregate | wk11 | TUBA1B | 10376 | 18809 | 1.21 | 1 | 0.88 | 6.5800876782309e-136 | 2.21709474230312e-131 |
72 | 15 | PTA | Pretubular aggregate | wk11 | HMGA1 | 3159 | 5010 | 1.18 | 1 | 0.63 | 5.25554448299136e-136 | 1.77080315809911e-131 |
72 | 15 | PTA | Pretubular aggregate | wk11 | PTTG1 | 9232 | 9690 | 1.16 | 0.83 | 0.19 | 3.08269715056279e-158 | 1.03868397791063e-153 |
72 | 15 | PTA | Pretubular aggregate | wk11 | MAD2L1 | 4085 | 6763 | 1.14 | 0.9 | 0.18 | 2.22949064831883e-200 | 7.51204579044547e-196 |
72 | 15 | PTA | Pretubular aggregate | wk11 | BIRC5 | 332 | 593 | 1.13 | 0.79 | 0.09 | 1.43423575907835e-238 | 4.83251396663858e-234 |
72 | 15 | PTA | Pretubular aggregate | wk11 | CENPF | 1063 | 1857 | 1.12 | 0.74 | 0.09 | 2.23527465467161e-227 | 7.53153442145053e-223 |
72 | 15 | PTA | Pretubular aggregate | wk11 | H2AFZ | 3015 | 4741 | 1.11 | 1 | 0.84 | 1.39708460021003e-134 | 4.70733685194766e-130 |
72 | 15 | PTA | Pretubular aggregate | wk11 | TYMS | 7298 | 12441 | 1.11 | 0.94 | 0.21 | 4.31535154115415e-177 | 1.45401454827648e-172 |
72 | 15 | PTA | Pretubular aggregate | wk11 | NUSAP1 | 51203 | 18538 | 1.08 | 0.8 | 0.11 | 7.45859309225899e-222 | 2.51309835650574e-217 |
72 | 15 | PTA | Pretubular aggregate | wk11 | CDK1 | 983 | 1722 | 1.07 | 0.78 | 0.09 | 2.34302129928411e-241 | 7.89457596580788e-237 |
72 | 15 | PTA | Pretubular aggregate | wk11 | CCNB1 | 891 | 1579 | 1.07 | 0.62 | 0.1 | 2.22779886674041e-143 | 7.50634550159515e-139 |
72 | 15 | PTA | Pretubular aggregate | wk11 | CKS1B | 1163 | 19083 | 1.05 | 0.93 | 0.34 | 5.28469881410709e-126 | 1.78062641842524e-121 |
72 | 15 | PTA | Pretubular aggregate | wk11 | KPNA2 | 3838 | 6395 | 1.03 | 0.83 | 0.37 | 3.61134129120068e-65 | 1.21680533465716e-60 |
72 | 15 | PTA | Pretubular aggregate | wk11 | CDC20 | 991 | 1723 | 1.02 | 0.56 | 0.06 | 1.48490611297572e-174 | 5.0032426570604e-170 |
72 | 15 | PTA | Pretubular aggregate | wk11 | CALCA | 796 | 1437 | 1.01 | 0.53 | 0.04 | 3.18882448836143e-222 | 1.0744425231085e-217 |
72 | 15 | PTA | Pretubular aggregate | wk11 | SMC4 | 10051 | 14013 | 1 | 0.9 | 0.25 | 1.74842581607927e-146 | 5.8911459446975e-142 |
72 | 15 | PTA | Pretubular aggregate | wk11 | CCNB2 | 9133 | 1580 | 0.99 | 0.68 | 0.11 | 9.98068516431343e-163 | 3.36289205926377e-158 |
72 | 15 | PTA | Pretubular aggregate | wk11 | PCLAF | 9768 | 28961 | 0.98 | 0.93 | 0.27 | 5.94522273337897e-128 | 2.00318334778471e-123 |
72 | 15 | PTA | Pretubular aggregate | wk11 | RRM2 | 6241 | 10452 | 0.97 | 0.77 | 0.08 | 2.52163210390373e-255 | 8.49638721089323e-251 |
72 | 15 | PTA | Pretubular aggregate | wk11 | AURKB | 9212 | 11390 | 0.97 | 0.66 | 0.06 | 2.95832864799308e-240 | 9.96779254654787e-236 |
72 | 15 | PTA | Pretubular aggregate | wk11 | TK1 | 7083 | 11830 | 0.95 | 0.82 | 0.11 | 1.63522876436268e-229 | 5.5097397986436e-225 |
72 | 15 | PTA | Pretubular aggregate | wk11 | CKS2 | 1164 | 2000 | 0.93 | 0.88 | 0.3 | 2.69563036151221e-104 | 9.08265694007923e-100 |
72 | 15 | PTA | Pretubular aggregate | wk11 | PAX8 | 7849 | 8622 | 0.92 | 0.93 | 0.33 | 6.85623859827421e-110 | 2.31014103330251e-105 |
72 | 15 | PTA | Pretubular aggregate | wk11 | ZWINT | 11130 | 13195 | 0.92 | 0.87 | 0.17 | 5.03768834001775e-172 | 1.69739870928558e-167 |
72 | 15 | PTA | Pretubular aggregate | wk11 | LHX1 | 3975 | 6593 | 0.92 | 0.73 | 0.15 | 9.772685409616e-132 | 3.29280862191602e-127 |
72 | 15 | PTA | Pretubular aggregate | wk11 | MCM7 | 4176 | 6950 | 0.9 | 0.93 | 0.34 | 1.31672259361537e-104 | 4.43656510692764e-100 |
72 | 15 | PTA | Pretubular aggregate | wk11 | PCNA | 5111 | 8729 | 0.9 | 0.89 | 0.35 | 4.08134441234228e-87 | 1.37516818629461e-82 |
72 | 15 | PTA | Pretubular aggregate | wk11 | PBK | 55872 | 18282 | 0.9 | 0.72 | 0.07 | 2.49690813344002e-248 | 8.41308226481281e-244 |
72 | 15 | PTA | Pretubular aggregate | wk11 | MKI67 | 4288 | 7107 | 0.89 | 0.66 | 0.07 | 9.90513277064672e-221 | 3.3374354357417e-216 |
72 | 15 | PTA | Pretubular aggregate | wk11 | KRT18 | 3875 | 6430 | 0.87 | 0.76 | 0.27 | 3.61142016019653e-78 | 1.21683190877662e-73 |
72 | 15 | PTA | Pretubular aggregate | wk11 | UBE2T | 29089 | 25009 | 0.87 | 0.81 | 0.13 | 7.56476941473672e-190 | 2.54887340660139e-185 |
72 | 15 | PTA | Pretubular aggregate | wk11 | TMSB15A | 11013 | 30744 | 0.87 | 0.93 | 0.28 | 8.87223304337914e-117 | 2.98941020163617e-112 |
72 | 15 | PTA | Pretubular aggregate | wk11 | CCNA2 | 890 | 1578 | 0.85 | 0.69 | 0.06 | 1.9552123136945e-258 | 6.58789236976226e-254 |
72 | 15 | PTA | Pretubular aggregate | wk11 | HES4 | 57801 | 24149 | 0.83 | 0.88 | 0.45 | 3.64112994441135e-70 | 1.22684232346996e-65 |
72 | 15 | PTA | Pretubular aggregate | wk11 | HMGB1 | 3146 | 4983 | 0.83 | 1 | 0.97 | 3.43574806581867e-116 | 1.15764095329694e-111 |
72 | 15 | PTA | Pretubular aggregate | wk11 | H2AFX | 3014 | 4739 | 0.83 | 0.78 | 0.21 | 5.68169869151121e-108 | 1.91439155711779e-103 |
72 | 15 | PTA | Pretubular aggregate | wk11 | PIMREG | 54478 | 25483 | 0.81 | 0.61 | 0.07 | 9.75671713723991e-186 | 3.28742827222161e-181 |
72 | 15 | PTA | Pretubular aggregate | wk11 | TUBB2B | 347733 | 30829 | 0.8 | 0.87 | 0.38 | 6.24301144035204e-70 | 2.10352027471222e-65 |
72 | 15 | PTA | Pretubular aggregate | wk11 | LYPD1 | 116372 | 28431 | 0.8 | 0.74 | 0.29 | 2.75422366953535e-58 | 9.28008123213242e-54 |
72 | 15 | PTA | Pretubular aggregate | wk11 | RANBP1 | 5902 | 9847 | 0.78 | 0.99 | 0.73 | 8.18842077600324e-102 | 2.75900649626653e-97 |
72 | 15 | PTA | Pretubular aggregate | wk11 | JAG1 | 182 | 6188 | 0.78 | 0.77 | 0.23 | 8.00256606630418e-92 | 2.69638461038053e-87 |
72 | 15 | PTA | Pretubular aggregate | wk11 | TUBA1C | 84790 | 20768 | 0.77 | 0.63 | 0.2 | 8.35562556361078e-66 | 2.81534447740302e-61 |
72 | 15 | PTA | Pretubular aggregate | wk11 | CENPV | 201161 | 29920 | 0.77 | 0.93 | 0.38 | 2.97644653804005e-85 | 1.00288389652721e-80 |
72 | 15 | PTA | Pretubular aggregate | wk11 | NUF2 | 83540 | 14621 | 0.77 | 0.62 | 0.05 | 2.39355057354802e-254 | 8.06482930251271e-250 |
72 | 15 | PTA | Pretubular aggregate | wk11 | CADM1 | 23705 | 5951 | 0.77 | 0.93 | 0.45 | 3.36293256830263e-65 | 1.13310649956389e-60 |
72 | 15 | PTA | Pretubular aggregate | wk11 | HIST1H4C | 8364 | 4787 | 0.77 | 0.59 | 0.13 | 4.31449331412601e-96 | 1.45372537726162e-91 |
72 | 15 | PTA | Pretubular aggregate | wk11 | TUBB | 203068 | 20778 | 0.76 | 1 | 0.96 | 4.46188616100142e-107 | 1.50338792308782e-102 |
72 | 15 | PTA | Pretubular aggregate | wk11 | LMNB1 | 4001 | 6637 | 0.75 | 0.91 | 0.25 | 1.33292968393997e-123 | 4.49117327706735e-119 |
72 | 15 | PTA | Pretubular aggregate | wk11 | PRC1 | 9055 | 9341 | 0.75 | 0.64 | 0.07 | 2.70558571791435e-193 | 9.11620051794062e-189 |
72 | 15 | PTA | Pretubular aggregate | wk11 | GGH | 8836 | 4248 | 0.75 | 0.86 | 0.24 | 8.38506283949001e-117 | 2.82526307313776e-112 |
72 | 15 | PTA | Pretubular aggregate | wk11 | TPX2 | 22974 | 1249 | 0.74 | 0.59 | 0.06 | 2.32376379788069e-179 | 7.82968974057918e-175 |
72 | 15 | PTA | Pretubular aggregate | wk11 | DTYMK | 1841 | 3061 | 0.73 | 0.84 | 0.29 | 1.5819165544421e-89 | 5.3301096385372e-85 |
72 | 15 | PTA | Pretubular aggregate | wk11 | ANP32E | 81611 | 16673 | 0.72 | 0.9 | 0.33 | 2.46480692884449e-86 | 8.30492046604862e-82 |
72 | 15 | PTA | Pretubular aggregate | wk11 | FEN1 | 2237 | 3650 | 0.71 | 0.7 | 0.16 | 6.31599338181478e-106 | 2.12811081006867e-101 |
72 | 15 | PTA | Pretubular aggregate | wk11 | HMGB3 | 3149 | 5004 | 0.71 | 0.9 | 0.37 | 5.60883301030366e-77 | 1.88984019449172e-72 |
72 | 15 | PTA | Pretubular aggregate | wk11 | PLK1 | 5347 | 9077 | 0.71 | 0.39 | 0.03 | 2.37342305133415e-143 | 7.99701162916529e-139 |
72 | 15 | PTA | Pretubular aggregate | wk11 | HMGN2 | 3151 | 4986 | 0.7 | 0.99 | 0.91 | 1.09203572650276e-87 | 3.67950517687839e-83 |
72 | 15 | PTA | Pretubular aggregate | wk11 | H2AFY | 9555 | 4740 | 0.69 | 0.97 | 0.64 | 5.0512410505145e-77 | 1.70196515956036e-72 |
72 | 15 | PTA | Pretubular aggregate | wk11 | RRM1 | 6240 | 10451 | 0.68 | 0.78 | 0.21 | 2.64084461087782e-105 | 8.89806183189173e-101 |
72 | 15 | PTA | Pretubular aggregate | wk11 | HEY1 | 23462 | 4880 | 0.68 | 0.69 | 0.25 | 2.81778789342637e-60 | 9.49425452811082e-56 |
72 | 15 | PTA | Pretubular aggregate | wk11 | FXYD6 | 53826 | 4030 | 0.68 | 0.89 | 0.31 | 4.6794199899689e-89 | 1.57668377142012e-84 |
72 | 15 | PTA | Pretubular aggregate | wk11 | RAN | 5901 | 9846 | 0.68 | 1 | 0.87 | 1.08571310518898e-97 | 3.65820173662375e-93 |
72 | 15 | PTA | Pretubular aggregate | wk11 | TACC3 | 10460 | 11524 | 0.68 | 0.6 | 0.07 | 1.71857621700349e-166 | 5.79057070557155e-162 |
72 | 15 | PTA | Pretubular aggregate | wk11 | UBE2S | 27338 | 17895 | 0.68 | 0.69 | 0.22 | 7.00042528462868e-65 | 2.35872329540279e-60 |
72 | 15 | PTA | Pretubular aggregate | wk11 | CENPM | 79019 | 18352 | 0.68 | 0.65 | 0.09 | 1.76877914598368e-167 | 5.9597244544774e-163 |
72 | 15 | PTA | Pretubular aggregate | wk11 | GINS2 | 51659 | 24575 | 0.67 | 0.69 | 0.19 | 5.27846962285045e-83 | 1.77852755472323e-78 |
72 | 15 | PTA | Pretubular aggregate | wk11 | TMPO | 7112 | 11875 | 0.67 | 0.86 | 0.29 | 2.03205994233806e-84 | 6.84682276971385e-80 |
72 | 15 | PTA | Pretubular aggregate | wk11 | PKM | 5315 | 9021 | 0.67 | 0.99 | 0.81 | 3.35452413298455e-80 | 1.13027336136782e-75 |
72 | 15 | PTA | Pretubular aggregate | wk11 | DUT | 1854 | 3078 | 0.66 | 0.91 | 0.57 | 1.58079789449985e-39 | 5.3263404257278e-35 |
72 | 15 | PTA | Pretubular aggregate | wk11 | CDCA8 | 55143 | 14629 | 0.66 | 0.55 | 0.05 | 6.48207079525786e-205 | 2.18406893375418e-200 |
72 | 15 | PTA | Pretubular aggregate | wk11 | ARL6IP1 | 23204 | 697 | 0.65 | 0.88 | 0.66 | 5.87049138890322e-16 | 1.97800336857705e-11 |
72 | 15 | PTA | Pretubular aggregate | wk11 | ID1 | 3397 | 5360 | 0.65 | 0.95 | 0.66 | 1.72114441970863e-49 | 5.79922400776626e-45 |
72 | 15 | PTA | Pretubular aggregate | wk11 | DHFR | 1719 | 2861 | 0.65 | 0.7 | 0.17 | 1.80234251547889e-99 | 6.07281287165459e-95 |
72 | 15 | PTA | Pretubular aggregate | wk11 | KIF22 | 3835 | 6391 | 0.65 | 0.73 | 0.19 | 4.51054457761751e-94 | 1.51978288998244e-89 |
72 | 15 | PTA | Pretubular aggregate | wk11 | CDCA5 | 113130 | 14626 | 0.65 | 0.64 | 0.06 | 1.09150335250188e-209 | 3.67771139591984e-205 |
72 | 15 | PTA | Pretubular aggregate | wk11 | PSRC1 | 84722 | 24472 | 0.65 | 0.42 | 0.05 | 1.62286197498084e-113 | 5.46807113850043e-109 |
72 | 15 | PTA | Pretubular aggregate | wk11 | CXCR4 | 7852 | 2561 | 0.64 | 0.6 | 0.12 | 2.22741266437112e-98 | 7.50504423133206e-94 |
72 | 15 | PTA | Pretubular aggregate | wk11 | PHGDH | 26227 | 8923 | 0.64 | 0.9 | 0.39 | 3.3446859834599e-70 | 1.12695849526698e-65 |
72 | 15 | PTA | Pretubular aggregate | wk11 | KDM2B | 84678 | 13610 | 0.64 | 0.61 | 0.18 | 4.86076949581719e-64 | 1.63778767392064e-59 |
72 | 15 | PTA | Pretubular aggregate | wk11 | MYC | 4609 | 7553 | 0.64 | 0.7 | 0.22 | 9.71663409645369e-68 | 3.27392269245911e-63 |
72 | 15 | PTA | Pretubular aggregate | wk11 | CDKN3 | 1033 | 1791 | 0.63 | 0.52 | 0.05 | 1.63763440770529e-171 | 5.51784537332222e-167 |
72 | 15 | PTA | Pretubular aggregate | wk11 | SNRPB | 6628 | 11153 | 0.63 | 0.98 | 0.7 | 2.0724113738395e-73 | 6.98278288301482e-69 |
72 | 15 | PTA | Pretubular aggregate | wk11 | IDH2 | 3418 | 5383 | 0.62 | 0.93 | 0.44 | 7.32936834235653e-69 | 2.46955736927361e-64 |
72 | 15 | PTA | Pretubular aggregate | wk11 | DEK | 7913 | 2768 | 0.62 | 0.97 | 0.58 | 6.22396431192341e-70 | 2.09710253525947e-65 |
72 | 15 | PTA | Pretubular aggregate | wk11 | SFRP2 | 6423 | 10777 | 0.62 | 0.37 | 0.04 | 2.41144587553992e-114 | 8.1251257330442e-110 |
72 | 15 | PTA | Pretubular aggregate | wk11 | MCM3 | 4172 | 6945 | 0.62 | 0.82 | 0.34 | 5.67717968070601e-55 | 1.91286892161708e-50 |
72 | 15 | PTA | Pretubular aggregate | wk11 | PIF1 | 80119 | 26220 | 0.62 | 0.31 | 0.02 | 7.79121725290472e-144 | 2.62517274119372e-139 |
72 | 15 | PTA | Pretubular aggregate | wk11 | ORC6 | 23594 | 17151 | 0.61 | 0.7 | 0.13 | 3.41868283163825e-129 | 1.15189099329219e-124 |
72 | 15 | PTA | Pretubular aggregate | wk11 | CENPA | 1058 | 1851 | 0.61 | 0.4 | 0.03 | 2.14007860601733e-155 | 7.2107808551148e-151 |
72 | 15 | PTA | Pretubular aggregate | wk11 | ENO1 | 2023 | 3350 | 0.61 | 0.99 | 0.79 | 1.45268642644941e-67 | 4.89468164527864e-63 |
72 | 15 | PTA | Pretubular aggregate | wk11 | HSPD1 | 3329 | 5261 | 0.61 | 0.99 | 0.8 | 5.77190186421857e-64 | 1.9447846141298e-59 |
72 | 15 | PTA | Pretubular aggregate | wk11 | LDHA | 3939 | 6535 | 0.6 | 0.95 | 0.58 | 1.03344226122563e-49 | 3.48208035497365e-45 |
72 | 15 | PTA | Pretubular aggregate | wk11 | CENPU | 79682 | 21348 | 0.6 | 0.66 | 0.11 | 1.99496340753042e-136 | 6.721829705333e-132 |
72 | 15 | PTA | Pretubular aggregate | wk11 | CDCA3 | 83461 | 14624 | 0.6 | 0.41 | 0.03 | 8.37644991261399e-144 | 2.82236103355616e-139 |
72 | 15 | PTA | Pretubular aggregate | wk11 | BUB3 | 9184 | 1151 | 0.6 | 0.82 | 0.4 | 5.18164966519353e-50 | 1.74590503819031e-45 |
72 | 15 | PTA | Pretubular aggregate | wk11 | DNAJC9 | 23234 | 19123 | 0.6 | 0.76 | 0.23 | 5.0571842602068e-80 | 1.70396766463408e-75 |