Marker Genes
Dataset: Single-cell transcriptomics reveals gene expression dynamics of human fetal kidney development
- tissue: Kidney
- ontology: Kidney
- genotype: -
- stage: Fetal
- treatment condition: WT
- cell/nucleus: Cells
- pmid: 30789893
- subset name: wk11
- total genes: Not reported
- clustering: scran
- pseudotime: Monocle 2
- link: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE114530
Rows:100
dataset id | cluster id | cluster name | cell type name | sample id | gene symbol | entrez geneid | species specific geneid |
avg log fc (?)
|
pct 1 | pct 2 | p value | padj |
---|---|---|---|---|---|---|---|---|---|---|---|---|
72 | 13 | Pod | Podocyte | wk11 | NPHS2 | 7827 | 13394 | 2.95 | 0.99 | 0.1 | 0 | 0 |
72 | 13 | Pod | Podocyte | wk11 | PODXL | 5420 | 9171 | 2.84 | 0.99 | 0.17 | 0 | 0 |
72 | 13 | Pod | Podocyte | wk11 | PTPRO | 5800 | 9678 | 2.59 | 0.98 | 0.06 | 0 | 0 |
72 | 13 | Pod | Podocyte | wk11 | TPPP3 | 51673 | 24162 | 2.56 | 0.98 | 0.11 | 0 | 0 |
72 | 13 | Pod | Podocyte | wk11 | DDN | 23109 | 24458 | 2.3 | 0.88 | 0.02 | 0 | 0 |
72 | 13 | Pod | Podocyte | wk11 | MAFB | 9935 | 6408 | 2.3 | 0.99 | 0.26 | 0 | 0 |
72 | 13 | Pod | Podocyte | wk11 | CLIC5 | 53405 | 13517 | 2.27 | 0.96 | 0.07 | 0 | 0 |
72 | 13 | Pod | Podocyte | wk11 | MYL9 | 10398 | 15754 | 2.26 | 0.98 | 0.26 | 0 | 0 |
72 | 13 | Pod | Podocyte | wk11 | SOST | 50964 | 13771 | 2.23 | 0.88 | 0.08 | 0 | 0 |
72 | 13 | Pod | Podocyte | wk11 | ANXA2 | 302 | 537 | 2.21 | 0.99 | 0.4 | 0 | 0 |
72 | 13 | Pod | Podocyte | wk11 | AIF1 | 199 | 352 | 2.13 | 0.85 | 0.04 | 0 | 0 |
72 | 13 | Pod | Podocyte | wk11 | MME | 4311 | 7154 | 2.09 | 0.88 | 0.07 | 0 | 0 |
72 | 13 | Pod | Podocyte | wk11 | TNNI1 | 7135 | 11945 | 2.08 | 0.87 | 0.18 | 0 | 0 |
72 | 13 | Pod | Podocyte | wk11 | GADD45A | 1647 | 4095 | 2.04 | 0.97 | 0.33 | 0 | 0 |
72 | 13 | Pod | Podocyte | wk11 | S100A6 | 6277 | 10496 | 1.99 | 0.96 | 0.3 | 0 | 0 |
72 | 13 | Pod | Podocyte | wk11 | MPP5 | 64398 | 18669 | 1.98 | 0.95 | 0.14 | 0 | 0 |
72 | 13 | Pod | Podocyte | wk11 | THSD7A | 221981 | 22207 | 1.97 | 0.88 | 0.09 | 0 | 0 |
72 | 13 | Pod | Podocyte | wk11 | ST6GALNAC3 | 256435 | 19343 | 1.93 | 0.88 | 0.08 | 0 | 0 |
72 | 13 | Pod | Podocyte | wk11 | ANXA1 | 301 | 533 | 1.9 | 0.48 | 0.01 | 0 | 0 |
72 | 13 | Pod | Podocyte | wk11 | PDLIM2 | 64236 | 13992 | 1.88 | 0.92 | 0.18 | 0 | 0 |
72 | 13 | Pod | Podocyte | wk11 | MXRA8 | 54587 | 7542 | 1.87 | 0.99 | 0.33 | 0 | 0 |
72 | 13 | Pod | Podocyte | wk11 | TNNT2 | 7139 | 11949 | 1.79 | 0.76 | 0.07 | 0 | 0 |
72 | 13 | Pod | Podocyte | wk11 | TCF21 | 6943 | 11632 | 1.79 | 0.99 | 0.37 | 0 | 0 |
72 | 13 | Pod | Podocyte | wk11 | ENPEP | 2028 | 3355 | 1.76 | 0.9 | 0.12 | 0 | 0 |
72 | 13 | Pod | Podocyte | wk11 | MRGPRF | 116535 | 24828 | 1.76 | 0.82 | 0.03 | 0 | 0 |
72 | 13 | Pod | Podocyte | wk11 | SPARC | 6678 | 11219 | 1.73 | 1 | 0.72 | 0 | 0 |
72 | 13 | Pod | Podocyte | wk11 | NES | 10763 | 7756 | 1.7 | 0.91 | 0.21 | 0 | 0 |
72 | 13 | Pod | Podocyte | wk11 | SEMA3B | 7869 | 10724 | 1.7 | 0.89 | 0.17 | 0 | 0 |
72 | 13 | Pod | Podocyte | wk11 | TYRO3 | 7301 | 12446 | 1.69 | 0.92 | 0.22 | 0 | 0 |
72 | 13 | Pod | Podocyte | wk11 | TUBB2A | 7280 | 12412 | 1.63 | 0.83 | 0.22 | 0 | 0 |
72 | 13 | Pod | Podocyte | wk11 | WT1 | 7490 | 12796 | 1.63 | 0.99 | 0.53 | 0 | 0 |
72 | 13 | Pod | Podocyte | wk11 | CLDN5 | 7122 | 2047 | 1.61 | 0.94 | 0.21 | 0 | 0 |
72 | 13 | Pod | Podocyte | wk11 | NTNG1 | 22854 | 23319 | 1.6 | 0.73 | 0.02 | 0 | 0 |
72 | 13 | Pod | Podocyte | wk11 | PTH1R | 5745 | 9608 | 1.6 | 0.79 | 0.07 | 0 | 0 |
72 | 13 | Pod | Podocyte | wk11 | RIPOR1 | 79567 | 25836 | 1.59 | 0.79 | 0.07 | 0 | 0 |
72 | 13 | Pod | Podocyte | wk11 | ARMH4 | 145407 | 19846 | 1.57 | 0.77 | 0.14 | 0 | 0 |
72 | 13 | Pod | Podocyte | wk11 | SBSPON | 157869 | 30362 | 1.53 | 0.76 | 0.07 | 0 | 0 |
72 | 13 | Pod | Podocyte | wk11 | TGFBR3 | 7049 | 11774 | 1.52 | 0.75 | 0.06 | 0 | 0 |
72 | 13 | Pod | Podocyte | wk11 | NPHS1 | 4868 | 7908 | 1.52 | 0.8 | 0.07 | 0 | 0 |
72 | 13 | Pod | Podocyte | wk11 | GSN | 2934 | 4620 | 1.51 | 0.82 | 0.14 | 0 | 0 |
72 | 13 | Pod | Podocyte | wk11 | ST3GAL6 | 10402 | 18080 | 1.49 | 0.77 | 0.07 | 0 | 0 |
72 | 13 | Pod | Podocyte | wk11 | SPOCK2 | 9806 | 13564 | 1.49 | 0.86 | 0.27 | 0 | 0 |
72 | 13 | Pod | Podocyte | wk11 | CRB2 | 286204 | 18688 | 1.46 | 0.76 | 0.18 | 0 | 0 |
72 | 13 | Pod | Podocyte | wk11 | BST2 | 684 | 1119 | 1.46 | 0.96 | 0.43 | 0 | 0 |
72 | 13 | Pod | Podocyte | wk11 | CXCL12 | 6387 | 10672 | 1.45 | 0.72 | 0.33 | 2.44774772037468e-226 | 8.24744116903046e-222 |
72 | 13 | Pod | Podocyte | wk11 | ARHGEF3 | 50650 | 683 | 1.45 | 0.79 | 0.1 | 0 | 0 |
72 | 13 | Pod | Podocyte | wk11 | ITM2B | 9445 | 6174 | 1.44 | 0.99 | 0.93 | 0 | 0 |
72 | 13 | Pod | Podocyte | wk11 | VASN | 114990 | 18517 | 1.44 | 0.85 | 0.22 | 0 | 0 |
72 | 13 | Pod | Podocyte | wk11 | SLC9A3R2 | 9351 | 11076 | 1.41 | 0.82 | 0.19 | 0 | 0 |
72 | 13 | Pod | Podocyte | wk11 | SPINT2 | 10653 | 11247 | 1.39 | 0.98 | 0.56 | 0 | 0 |
72 | 13 | Pod | Podocyte | wk11 | P3H2 | 55214 | 19317 | 1.39 | 0.78 | 0.14 | 0 | 0 |
72 | 13 | Pod | Podocyte | wk11 | PLTP | 5360 | 9093 | 1.38 | 0.73 | 0.11 | 0 | 0 |
72 | 13 | Pod | Podocyte | wk11 | ACTN4 | 81 | 166 | 1.37 | 0.89 | 0.38 | 0 | 0 |
72 | 13 | Pod | Podocyte | wk11 | RETREG1 | 54463 | 25964 | 1.36 | 0.74 | 0.1 | 0 | 0 |
72 | 13 | Pod | Podocyte | wk11 | CTSL | 1514 | 2537 | 1.34 | 0.75 | 0.33 | 2.29316723297911e-282 | 7.72659767479983e-278 |
72 | 13 | Pod | Podocyte | wk11 | FGF1 | 2246 | 3665 | 1.32 | 0.61 | 0.01 | 0 | 0 |
72 | 13 | Pod | Podocyte | wk11 | LOXL1 | 4016 | 6665 | 1.32 | 0.83 | 0.24 | 0 | 0 |
72 | 13 | Pod | Podocyte | wk11 | SHISA2 | 387914 | 20366 | 1.32 | 0.79 | 0.29 | 6.82488048397451e-306 | 2.29957523027037e-301 |
72 | 13 | Pod | Podocyte | wk11 | TAGLN2 | 8407 | 11554 | 1.31 | 0.79 | 0.25 | 0 | 0 |
72 | 13 | Pod | Podocyte | wk11 | SDC2 | 6383 | 10659 | 1.27 | 0.92 | 0.55 | 0 | 0 |
72 | 13 | Pod | Podocyte | wk11 | ADM | 133 | 259 | 1.27 | 0.54 | 0.09 | 1.89367686189065e-283 | 6.38055481845437e-279 |
72 | 13 | Pod | Podocyte | wk11 | SELENOP | 6414 | 10751 | 1.26 | 0.95 | 0.49 | 0 | 0 |
72 | 13 | Pod | Podocyte | wk11 | CITED2 | 10370 | 1987 | 1.25 | 0.98 | 0.69 | 0 | 0 |
72 | 13 | Pod | Podocyte | wk11 | TJP1 | 7082 | 11827 | 1.25 | 0.78 | 0.22 | 0 | 0 |
72 | 13 | Pod | Podocyte | wk11 | DUSP23 | 54935 | 21480 | 1.23 | 0.68 | 0.16 | 0 | 0 |
72 | 13 | Pod | Podocyte | wk11 | LTBP4 | 8425 | 6717 | 1.22 | 0.87 | 0.33 | 0 | 0 |
72 | 13 | Pod | Podocyte | wk11 | SRGAP1 | 57522 | 17382 | 1.22 | 0.77 | 0.23 | 0 | 0 |
72 | 13 | Pod | Podocyte | wk11 | VWA1 | 64856 | 30910 | 1.2 | 0.67 | 0.11 | 0 | 0 |
72 | 13 | Pod | Podocyte | wk11 | HTRA1 | 5654 | 9476 | 1.19 | 0.56 | 0.03 | 0 | 0 |
72 | 13 | Pod | Podocyte | wk11 | CPXM1 | 56265 | 15771 | 1.19 | 0.85 | 0.39 | 0 | 0 |
72 | 13 | Pod | Podocyte | wk11 | KLRB1 | 3820 | 6373 | 1.18 | 0.54 | 0.02 | 0 | 0 |
72 | 13 | Pod | Podocyte | wk11 | AIF1L | 83543 | 28904 | 1.18 | 0.86 | 0.35 | 0 | 0 |
72 | 13 | Pod | Podocyte | wk11 | VEGFA | 7422 | 12680 | 1.17 | 0.64 | 0.1 | 0 | 0 |
72 | 13 | Pod | Podocyte | wk11 | PHYHIP | 9796 | 16865 | 1.16 | 0.54 | 0.02 | 0 | 0 |
72 | 13 | Pod | Podocyte | wk11 | PON2 | 5445 | 9205 | 1.16 | 0.9 | 0.46 | 0 | 0 |
72 | 13 | Pod | Podocyte | wk11 | SYNPO | 11346 | 30672 | 1.15 | 0.59 | 0.04 | 0 | 0 |
72 | 13 | Pod | Podocyte | wk11 | PLD3 | 23646 | 17158 | 1.15 | 0.94 | 0.58 | 0 | 0 |
72 | 13 | Pod | Podocyte | wk11 | SNCA | 6622 | 11138 | 1.15 | 0.75 | 0.19 | 0 | 0 |
72 | 13 | Pod | Podocyte | wk11 | TSC22D3 | 1831 | 3051 | 1.14 | 0.88 | 0.44 | 0 | 0 |
72 | 13 | Pod | Podocyte | wk11 | NECTIN2 | 5819 | 9707 | 1.14 | 0.93 | 0.54 | 0 | 0 |
72 | 13 | Pod | Podocyte | wk11 | IQGAP2 | 10788 | 6111 | 1.14 | 0.65 | 0.12 | 0 | 0 |
72 | 13 | Pod | Podocyte | wk11 | LEFTY1 | 10637 | 6552 | 1.13 | 0.56 | 0.09 | 2.49788714365072e-301 | 8.41638094181673e-297 |
72 | 13 | Pod | Podocyte | wk11 | LEPROT | 54741 | 29477 | 1.1 | 0.86 | 0.45 | 0 | 0 |
72 | 13 | Pod | Podocyte | wk11 | RAMP1 | 10267 | 9843 | 1.1 | 0.55 | 0.05 | 0 | 0 |
72 | 13 | Pod | Podocyte | wk11 | AXL | 558 | 905 | 1.09 | 0.59 | 0.15 | 2.8545415150653e-256 | 9.61809218086103e-252 |
72 | 13 | Pod | Podocyte | wk11 | SEPTIN11 | 55752 | 25589 | 1.09 | 0.95 | 0.61 | 0 | 0 |
72 | 13 | Pod | Podocyte | wk11 | EZR | 7430 | 12691 | 1.08 | 0.85 | 0.42 | 0 | 0 |
72 | 13 | Pod | Podocyte | wk11 | SAMD11 | 148398 | 28706 | 1.08 | 0.7 | 0.18 | 0 | 0 |
72 | 13 | Pod | Podocyte | wk11 | DUSP1 | 1843 | 3064 | 1.07 | 0.94 | 0.63 | 0 | 0 |
72 | 13 | Pod | Podocyte | wk11 | MYH9 | 4627 | 7579 | 1.07 | 0.72 | 0.24 | 1.60978011240128e-302 | 5.42399311072487e-298 |
72 | 13 | Pod | Podocyte | wk11 | NPNT | 255743 | 27405 | 1.06 | 0.57 | 0.09 | 0 | 0 |
72 | 13 | Pod | Podocyte | wk11 | CD151 | 977 | 1630 | 1.06 | 0.93 | 0.59 | 0 | 0 |
72 | 13 | Pod | Podocyte | wk11 | ADAMTS9 | 56999 | 13202 | 1.05 | 0.62 | 0.14 | 2.12732911969316e-296 | 7.16782273589412e-292 |
72 | 13 | Pod | Podocyte | wk11 | SLC48A1 | 55652 | 26035 | 1.04 | 0.61 | 0.11 | 0 | 0 |
72 | 13 | Pod | Podocyte | wk11 | NEAT1 | 283131 | 30815 | 1.03 | 0.81 | 0.34 | 3.94717670231044e-302 | 1.32996171807648e-297 |
72 | 13 | Pod | Podocyte | wk11 | HACD2 | 201562 | 9640 | 1.03 | 0.61 | 0.19 | 2.73304577277113e-248 | 9.20872442677505e-244 |
72 | 13 | Pod | Podocyte | wk11 | PC | 5091 | 8636 | 1.03 | 0.58 | 0.07 | 0 | 0 |
72 | 13 | Pod | Podocyte | wk11 | STT3B | 201595 | 30611 | 1.03 | 0.79 | 0.37 | 8.10568169123342e-283 | 2.73112838904419e-278 |
72 | 13 | Pod | Podocyte | wk11 | BGN | 633 | 1044 | 1.02 | 0.63 | 0.15 | 2.14815628503498e-269 | 7.23799778679685e-265 |
72 | 13 | Pod | Podocyte | wk11 | TMSB4X | 7114 | 11881 | 1.02 | 1 | 0.98 | 0 | 0 |