Marker Genes
Dataset: Single-cell transcriptomics reveals gene expression dynamics of human fetal kidney development
- tissue: Kidney
- ontology: Kidney
- genotype: -
- stage: Fetal
- treatment condition: WT
- cell/nucleus: Cells
- pmid: 30789893
- subset name: wk11
- total genes: Not reported
- clustering: scran
- pseudotime: Monocle 2
- link: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE114530
Rows:100
dataset id | cluster id | cluster name | cell type name | sample id | gene symbol | entrez geneid | species specific geneid |
avg log fc (?)
|
pct 1 | pct 2 | p value | padj |
---|---|---|---|---|---|---|---|---|---|---|---|---|
72 | 12 | NPCd | Nephron progenitor cells d | wk11 | HMGB2 | 3148 | 5000 | 1.67 | 0.99 | 0.46 | 2.6349338604685e-139 | 8.87814614946255e-135 |
72 | 12 | NPCd | Nephron progenitor cells d | wk11 | TOP2A | 7153 | 11989 | 1.57 | 0.84 | 0.1 | 2.93566923500447e-238 | 9.89144392042407e-234 |
72 | 12 | NPCd | Nephron progenitor cells d | wk11 | NUSAP1 | 51203 | 18538 | 1.5 | 0.84 | 0.11 | 9.8528060694256e-231 | 3.31980447703226e-226 |
72 | 12 | NPCd | Nephron progenitor cells d | wk11 | UBE2C | 11065 | 15937 | 1.49 | 0.79 | 0.1 | 2.78657260558652e-217 | 9.38907773726323e-213 |
72 | 12 | NPCd | Nephron progenitor cells d | wk11 | TUBA1B | 10376 | 18809 | 1.38 | 1 | 0.88 | 7.26669781251941e-122 | 2.44844116095029e-117 |
72 | 12 | NPCd | Nephron progenitor cells d | wk11 | PCLAF | 9768 | 28961 | 1.36 | 0.92 | 0.28 | 1.64557230797059e-126 | 5.5445913344761e-122 |
72 | 12 | NPCd | Nephron progenitor cells d | wk11 | CDK1 | 983 | 1722 | 1.35 | 0.82 | 0.1 | 1.28467819095401e-234 | 4.32859469660043e-230 |
72 | 12 | NPCd | Nephron progenitor cells d | wk11 | TYMS | 7298 | 12441 | 1.32 | 0.91 | 0.23 | 1.43812541338313e-148 | 4.84561976785311e-144 |
72 | 12 | NPCd | Nephron progenitor cells d | wk11 | PTTG1 | 9232 | 9690 | 1.31 | 0.77 | 0.2 | 2.23330820843135e-106 | 7.52490867748858e-102 |
72 | 12 | NPCd | Nephron progenitor cells d | wk11 | BIRC5 | 332 | 593 | 1.27 | 0.81 | 0.1 | 1.28550170475426e-211 | 4.33136944399902e-207 |
72 | 12 | NPCd | Nephron progenitor cells d | wk11 | MAD2L1 | 4085 | 6763 | 1.22 | 0.89 | 0.19 | 3.20555635874618e-167 | 1.08008015951594e-162 |
72 | 12 | NPCd | Nephron progenitor cells d | wk11 | CCNB2 | 9133 | 1580 | 1.17 | 0.68 | 0.11 | 6.14349316004949e-134 | 2.06998858534708e-129 |
72 | 12 | NPCd | Nephron progenitor cells d | wk11 | H2AFZ | 3015 | 4741 | 1.14 | 1 | 0.84 | 4.74196673912251e-116 | 1.59775827307994e-111 |
72 | 12 | NPCd | Nephron progenitor cells d | wk11 | TK1 | 7083 | 11830 | 1.13 | 0.82 | 0.12 | 1.76957208492647e-195 | 5.96239618295125e-191 |
72 | 12 | NPCd | Nephron progenitor cells d | wk11 | PBK | 55872 | 18282 | 1.12 | 0.75 | 0.08 | 2.56117038199076e-236 | 8.62960748507967e-232 |
72 | 12 | NPCd | Nephron progenitor cells d | wk11 | RRM2 | 6241 | 10452 | 1.1 | 0.75 | 0.09 | 4.18814687732834e-203 | 1.41115420884701e-198 |
72 | 12 | NPCd | Nephron progenitor cells d | wk11 | MKI67 | 4288 | 7107 | 1.09 | 0.75 | 0.07 | 2.18316188612608e-248 | 7.35594565911321e-244 |
72 | 12 | NPCd | Nephron progenitor cells d | wk11 | CENPF | 1063 | 1857 | 1.09 | 0.7 | 0.1 | 2.71995513547468e-163 | 9.16461683346839e-159 |
72 | 12 | NPCd | Nephron progenitor cells d | wk11 | SMC4 | 10051 | 14013 | 1.08 | 0.87 | 0.26 | 3.5435784398764e-115 | 1.19397331953196e-110 |
72 | 12 | NPCd | Nephron progenitor cells d | wk11 | HIST1H4C | 8364 | 4787 | 1.06 | 0.56 | 0.14 | 1.43032248192831e-76 | 4.81932857060924e-72 |
72 | 12 | NPCd | Nephron progenitor cells d | wk11 | ZWINT | 11130 | 13195 | 1.06 | 0.85 | 0.18 | 9.26994418222487e-143 | 3.12341499275885e-138 |
72 | 12 | NPCd | Nephron progenitor cells d | wk11 | CCNB1 | 891 | 1579 | 1.06 | 0.55 | 0.11 | 4.02615182295615e-88 | 1.35657159522684e-83 |
72 | 12 | NPCd | Nephron progenitor cells d | wk11 | CKS2 | 1164 | 2000 | 1.03 | 0.86 | 0.31 | 2.96763171288635e-90 | 9.99913829339928e-86 |
72 | 12 | NPCd | Nephron progenitor cells d | wk11 | CCNA2 | 890 | 1578 | 1.02 | 0.68 | 0.07 | 8.87961059983188e-216 | 2.99189599550735e-211 |
72 | 12 | NPCd | Nephron progenitor cells d | wk11 | AURKB | 9212 | 11390 | 0.99 | 0.66 | 0.06 | 1.73062579829854e-200 | 5.83117056478709e-196 |
72 | 12 | NPCd | Nephron progenitor cells d | wk11 | CDC20 | 991 | 1723 | 0.99 | 0.49 | 0.07 | 4.54649277482515e-108 | 1.53189527554958e-103 |
72 | 12 | NPCd | Nephron progenitor cells d | wk11 | PIMREG | 54478 | 25483 | 0.97 | 0.66 | 0.07 | 3.24241557624193e-180 | 1.09249950425896e-175 |
72 | 12 | NPCd | Nephron progenitor cells d | wk11 | CENPW | 387103 | 21488 | 0.97 | 0.76 | 0.2 | 9.53339769094201e-100 | 3.212183017986e-95 |
72 | 12 | NPCd | Nephron progenitor cells d | wk11 | CKS1B | 1163 | 19083 | 0.97 | 0.89 | 0.35 | 3.01626884696064e-90 | 1.01630162529492e-85 |
72 | 12 | NPCd | Nephron progenitor cells d | wk11 | UBE2T | 29089 | 25009 | 0.96 | 0.75 | 0.14 | 4.15364015039914e-138 | 1.39952751227548e-133 |
72 | 12 | NPCd | Nephron progenitor cells d | wk11 | H2AFX | 3014 | 4739 | 0.94 | 0.79 | 0.21 | 1.572587641395e-105 | 5.29867679891631e-101 |
72 | 12 | NPCd | Nephron progenitor cells d | wk11 | TPX2 | 22974 | 1249 | 0.94 | 0.63 | 0.07 | 5.85624177803071e-175 | 1.97320210468967e-170 |
72 | 12 | NPCd | Nephron progenitor cells d | wk11 | HMGB1 | 3146 | 4983 | 0.94 | 1 | 0.97 | 1.65797902051801e-111 | 5.58639451173339e-107 |
72 | 12 | NPCd | Nephron progenitor cells d | wk11 | LMNB1 | 4001 | 6637 | 0.92 | 0.86 | 0.26 | 1.61992519798157e-102 | 5.45817596207911e-98 |
72 | 12 | NPCd | Nephron progenitor cells d | wk11 | PCNA | 5111 | 8729 | 0.91 | 0.83 | 0.36 | 6.23484155529599e-63 | 2.10076751364143e-58 |
72 | 12 | NPCd | Nephron progenitor cells d | wk11 | TUBB | 203068 | 20778 | 0.89 | 1 | 0.96 | 3.94767606158626e-97 | 1.33012997219087e-92 |
72 | 12 | NPCd | Nephron progenitor cells d | wk11 | PRC1 | 9055 | 9341 | 0.88 | 0.62 | 0.08 | 6.60265199327769e-153 | 2.22469756261499e-148 |
72 | 12 | NPCd | Nephron progenitor cells d | wk11 | GTSE1 | 51512 | 13698 | 0.88 | 0.58 | 0.05 | 1.12240146448435e-181 | 3.78181949443356e-177 |
72 | 12 | NPCd | Nephron progenitor cells d | wk11 | HMGN2 | 3151 | 4986 | 0.87 | 1 | 0.92 | 2.32876976311256e-98 | 7.84655683983146e-94 |
72 | 12 | NPCd | Nephron progenitor cells d | wk11 | ARL6IP1 | 23204 | 697 | 0.87 | 0.89 | 0.67 | 8.85525373583814e-26 | 2.9836891937533e-21 |
72 | 12 | NPCd | Nephron progenitor cells d | wk11 | TACC3 | 10460 | 11524 | 0.87 | 0.64 | 0.08 | 3.55439077342928e-167 | 1.19761642719926e-162 |
72 | 12 | NPCd | Nephron progenitor cells d | wk11 | KIF22 | 3835 | 6391 | 0.86 | 0.73 | 0.2 | 2.99181396040112e-93 | 1.00806179581755e-88 |
72 | 12 | NPCd | Nephron progenitor cells d | wk11 | CRABP2 | 1382 | 2339 | 0.85 | 0.77 | 0.31 | 2.1022773503752e-55 | 7.08341330435419e-51 |
72 | 12 | NPCd | Nephron progenitor cells d | wk11 | CDCA5 | 113130 | 14626 | 0.84 | 0.61 | 0.07 | 4.85639637566749e-161 | 1.6363141948174e-156 |
72 | 12 | NPCd | Nephron progenitor cells d | wk11 | NNAT | 4826 | 7860 | 0.84 | 0.81 | 0.3 | 5.23640444162166e-67 | 1.76435411256e-62 |
72 | 12 | NPCd | Nephron progenitor cells d | wk11 | TMSB15A | 11013 | 30744 | 0.84 | 0.89 | 0.29 | 1.02608867742982e-88 | 3.45730318973205e-84 |
72 | 12 | NPCd | Nephron progenitor cells d | wk11 | STMN1 | 3925 | 6510 | 0.82 | 1 | 0.97 | 1.51733676154335e-106 | 5.11251448434417e-102 |
72 | 12 | NPCd | Nephron progenitor cells d | wk11 | DEK | 7913 | 2768 | 0.8 | 0.97 | 0.59 | 4.54060948471022e-69 | 1.52991295977826e-64 |
72 | 12 | NPCd | Nephron progenitor cells d | wk11 | CDCA4 | 55038 | 14625 | 0.8 | 0.68 | 0.16 | 8.10540307923245e-95 | 2.73103451351658e-90 |
72 | 12 | NPCd | Nephron progenitor cells d | wk11 | UHRF1 | 29128 | 12556 | 0.8 | 0.72 | 0.2 | 1.15787962655454e-79 | 3.90135961371288e-75 |
72 | 12 | NPCd | Nephron progenitor cells d | wk11 | KIF20B | 9585 | 7212 | 0.79 | 0.63 | 0.11 | 1.23279120281476e-111 | 4.15376667876404e-107 |
72 | 12 | NPCd | Nephron progenitor cells d | wk11 | MCM7 | 4176 | 6950 | 0.79 | 0.88 | 0.35 | 3.20237607650951e-71 | 1.07900859521912e-66 |
72 | 12 | NPCd | Nephron progenitor cells d | wk11 | CENPM | 79019 | 18352 | 0.79 | 0.64 | 0.1 | 1.74088206890937e-137 | 5.86572804298322e-133 |
72 | 12 | NPCd | Nephron progenitor cells d | wk11 | KPNA2 | 3838 | 6395 | 0.78 | 0.71 | 0.38 | 2.08833757194275e-30 | 7.03644461490392e-26 |
72 | 12 | NPCd | Nephron progenitor cells d | wk11 | RANBP1 | 5902 | 9847 | 0.78 | 0.98 | 0.73 | 1.86452909452697e-70 | 6.28234433109918e-66 |
72 | 12 | NPCd | Nephron progenitor cells d | wk11 | RRM1 | 6240 | 10451 | 0.78 | 0.73 | 0.22 | 8.62716427915794e-80 | 2.90683673221948e-75 |
72 | 12 | NPCd | Nephron progenitor cells d | wk11 | FEN1 | 2237 | 3650 | 0.77 | 0.67 | 0.17 | 6.77384795672507e-85 | 2.28238033053894e-80 |
72 | 12 | NPCd | Nephron progenitor cells d | wk11 | PLK1 | 5347 | 9077 | 0.77 | 0.42 | 0.03 | 2.81255119318918e-133 | 9.47660999033162e-129 |
72 | 12 | NPCd | Nephron progenitor cells d | wk11 | CDKN3 | 1033 | 1791 | 0.76 | 0.53 | 0.06 | 5.75967906483905e-148 | 1.94066626410687e-143 |
72 | 12 | NPCd | Nephron progenitor cells d | wk11 | DTYMK | 1841 | 3061 | 0.76 | 0.85 | 0.3 | 3.38111711970236e-81 | 1.13923360231251e-76 |
72 | 12 | NPCd | Nephron progenitor cells d | wk11 | SPC25 | 57405 | 24031 | 0.76 | 0.52 | 0.05 | 5.03415844070691e-162 | 1.69620934501179e-157 |
72 | 12 | NPCd | Nephron progenitor cells d | wk11 | CENPA | 1058 | 1851 | 0.75 | 0.39 | 0.03 | 4.00597629441547e-122 | 1.34977365264035e-117 |
72 | 12 | NPCd | Nephron progenitor cells d | wk11 | ANP32E | 81611 | 16673 | 0.75 | 0.86 | 0.34 | 3.00283259969862e-67 | 1.01177441614245e-62 |
72 | 12 | NPCd | Nephron progenitor cells d | wk11 | UBE2S | 27338 | 17895 | 0.74 | 0.66 | 0.23 | 5.79929030807809e-54 | 1.95401287640383e-49 |
72 | 12 | NPCd | Nephron progenitor cells d | wk11 | CENPH | 64946 | 17268 | 0.73 | 0.61 | 0.13 | 1.06808677172141e-93 | 3.59881156863811e-89 |
72 | 12 | NPCd | Nephron progenitor cells d | wk11 | NUF2 | 83540 | 14621 | 0.73 | 0.52 | 0.06 | 3.25596249536891e-139 | 1.0970640031896e-134 |
72 | 12 | NPCd | Nephron progenitor cells d | wk11 | TMPO | 7112 | 11875 | 0.72 | 0.83 | 0.3 | 3.62243783753717e-71 | 1.22054420497977e-66 |
72 | 12 | NPCd | Nephron progenitor cells d | wk11 | LYPD1 | 116372 | 28431 | 0.72 | 0.79 | 0.3 | 9.55137284758317e-53 | 3.21823956726467e-48 |
72 | 12 | NPCd | Nephron progenitor cells d | wk11 | KIF23 | 9493 | 6392 | 0.72 | 0.55 | 0.04 | 7.482664973192e-205 | 2.52120913606731e-200 |
72 | 12 | NPCd | Nephron progenitor cells d | wk11 | KIFC1 | 3833 | 6389 | 0.71 | 0.55 | 0.04 | 2.91249469423e-190 | 9.81335962273856e-186 |
72 | 12 | NPCd | Nephron progenitor cells d | wk11 | ORC6 | 23594 | 17151 | 0.71 | 0.63 | 0.14 | 2.65704579306665e-84 | 8.95265009515877e-80 |
72 | 12 | NPCd | Nephron progenitor cells d | wk11 | KIF2C | 11004 | 6393 | 0.71 | 0.52 | 0.04 | 2.8300355992702e-170 | 9.53552194818102e-166 |
72 | 12 | NPCd | Nephron progenitor cells d | wk11 | PSIP1 | 11168 | 9527 | 0.71 | 0.95 | 0.62 | 3.06469488594675e-59 | 1.0326182948709e-54 |
72 | 12 | NPCd | Nephron progenitor cells d | wk11 | HMGB3 | 3149 | 5004 | 0.71 | 0.84 | 0.38 | 3.20323571592593e-53 | 1.07929824212408e-48 |
72 | 12 | NPCd | Nephron progenitor cells d | wk11 | RAD51AP1 | 10635 | 16956 | 0.71 | 0.58 | 0.07 | 9.04437004649594e-142 | 3.04741004346634e-137 |
72 | 12 | NPCd | Nephron progenitor cells d | wk11 | SMC2 | 10592 | 14011 | 0.7 | 0.72 | 0.22 | 1.83358534233143e-72 | 6.17808245245151e-68 |
72 | 12 | NPCd | Nephron progenitor cells d | wk11 | PSRC1 | 84722 | 24472 | 0.7 | 0.47 | 0.05 | 1.17302694483308e-117 | 3.95239698792058e-113 |
72 | 12 | NPCd | Nephron progenitor cells d | wk11 | ITGB3BP | 23421 | 6157 | 0.69 | 0.73 | 0.21 | 1.34104210357156e-78 | 4.51850726377402e-74 |
72 | 12 | NPCd | Nephron progenitor cells d | wk11 | NDC80 | 10403 | 16909 | 0.69 | 0.48 | 0.04 | 1.11995476386971e-150 | 3.77357558138259e-146 |
72 | 12 | NPCd | Nephron progenitor cells d | wk11 | DUT | 1854 | 3078 | 0.68 | 0.85 | 0.58 | 7.73141982323557e-34 | 2.60502459524099e-29 |
72 | 12 | NPCd | Nephron progenitor cells d | wk11 | FBXO5 | 26271 | 13584 | 0.68 | 0.55 | 0.1 | 1.84569749127264e-87 | 6.21889312709402e-83 |
72 | 12 | NPCd | Nephron progenitor cells d | wk11 | CDCA3 | 83461 | 14624 | 0.68 | 0.43 | 0.04 | 4.16319338142942e-131 | 1.40274637793883e-126 |
72 | 12 | NPCd | Nephron progenitor cells d | wk11 | CDT1 | 81620 | 24576 | 0.67 | 0.59 | 0.13 | 1.9903272385604e-85 | 6.70620859760542e-81 |
72 | 12 | NPCd | Nephron progenitor cells d | wk11 | RNASEH2A | 10535 | 18518 | 0.66 | 0.65 | 0.17 | 1.8011415272447e-72 | 6.06876626189828e-68 |
72 | 12 | NPCd | Nephron progenitor cells d | wk11 | MELK | 9833 | 16870 | 0.66 | 0.53 | 0.06 | 3.1115862465687e-139 | 1.04841786991886e-134 |
72 | 12 | NPCd | Nephron progenitor cells d | wk11 | DHFR | 1719 | 2861 | 0.66 | 0.63 | 0.18 | 5.68575494656552e-66 | 1.91575827169579e-61 |
72 | 12 | NPCd | Nephron progenitor cells d | wk11 | ASF1B | 55723 | 20996 | 0.66 | 0.52 | 0.07 | 4.90780536846661e-119 | 1.65363594085114e-114 |
72 | 12 | NPCd | Nephron progenitor cells d | wk11 | CLSPN | 63967 | 19715 | 0.66 | 0.5 | 0.1 | 1.91285821222792e-77 | 6.44518446028074e-73 |
72 | 12 | NPCd | Nephron progenitor cells d | wk11 | CKAP2 | 26586 | 1990 | 0.65 | 0.59 | 0.13 | 4.01582400041535e-80 | 1.35309173869995e-75 |
72 | 12 | NPCd | Nephron progenitor cells d | wk11 | CENPU | 79682 | 21348 | 0.65 | 0.6 | 0.12 | 3.07338320859561e-93 | 1.0355457383042e-88 |
72 | 12 | NPCd | Nephron progenitor cells d | wk11 | BUB3 | 9184 | 1151 | 0.65 | 0.77 | 0.4 | 6.12125874590373e-38 | 2.0624969218448e-33 |
72 | 12 | NPCd | Nephron progenitor cells d | wk11 | LSM5 | 23658 | 17162 | 0.64 | 0.85 | 0.42 | 1.19460139379374e-43 | 4.02508993624861e-39 |
72 | 12 | NPCd | Nephron progenitor cells d | wk11 | CDCA8 | 55143 | 14629 | 0.64 | 0.5 | 0.06 | 8.23179263371525e-129 | 2.77362021000402e-124 |
72 | 12 | NPCd | Nephron progenitor cells d | wk11 | SGO2 | 151246 | 30812 | 0.63 | 0.42 | 0.07 | 1.12357430201576e-78 | 3.7857712532119e-74 |
72 | 12 | NPCd | Nephron progenitor cells d | wk11 | DNAJC9 | 23234 | 19123 | 0.63 | 0.71 | 0.24 | 4.04050904473374e-61 | 1.36140911753258e-56 |
72 | 12 | NPCd | Nephron progenitor cells d | wk11 | SAE1 | 10055 | 30660 | 0.63 | 0.83 | 0.38 | 1.87454190283323e-53 | 6.31608148740629e-49 |
72 | 12 | NPCd | Nephron progenitor cells d | wk11 | DLK1 | 8788 | 2907 | 0.62 | 0.19 | 0.05 | 3.53407701661462e-21 | 1.19077190997813e-16 |
72 | 12 | NPCd | Nephron progenitor cells d | wk11 | H2AFY | 9555 | 4740 | 0.62 | 0.95 | 0.64 | 3.46201854042882e-48 | 1.16649252701209e-43 |
72 | 12 | NPCd | Nephron progenitor cells d | wk11 | GINS2 | 51659 | 24575 | 0.61 | 0.66 | 0.2 | 3.21710156792107e-55 | 1.08397020229533e-50 |
72 | 12 | NPCd | Nephron progenitor cells d | wk11 | MXD3 | 83463 | 14008 | 0.61 | 0.45 | 0.04 | 2.01607767661657e-129 | 6.79297212359188e-125 |