Marker Genes
Dataset: Single-cell transcriptomics reveals gene expression dynamics of human fetal kidney development
- tissue: Kidney
- ontology: Kidney
- genotype: -
- stage: Fetal
- treatment condition: WT
- cell/nucleus: Cells
- pmid: 30789893
- subset name: wk11
- total genes: Not reported
- clustering: scran
- pseudotime: Monocle 2
- link: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE114530
Rows:100
dataset id | cluster id | cluster name | cell type name | sample id | gene symbol | entrez geneid | species specific geneid |
avg log fc (?)
|
pct 1 | pct 2 | p value | padj |
---|---|---|---|---|---|---|---|---|---|---|---|---|
72 | 11 | NPCc | Nephron progenitor cells c | wk11 | CRABP2 | 1382 | 2339 | 1.46 | 0.91 | 0.24 | 0 | 0 |
72 | 11 | NPCc | Nephron progenitor cells c | wk11 | NNAT | 4826 | 7860 | 1.17 | 0.83 | 0.24 | 8.37353740946783e-251 | 2.82137969474609e-246 |
72 | 11 | NPCc | Nephron progenitor cells c | wk11 | LYPD1 | 116372 | 28431 | 0.97 | 0.8 | 0.24 | 3.04957542022785e-198 | 1.02752394209157e-193 |
72 | 11 | NPCc | Nephron progenitor cells c | wk11 | TMEM100 | 55273 | 25607 | 0.96 | 0.63 | 0.22 | 3.00896366187416e-130 | 1.01384021623188e-125 |
72 | 11 | NPCc | Nephron progenitor cells c | wk11 | RSPO3 | 84870 | 20866 | 0.93 | 0.6 | 0.12 | 4.01285014817471e-203 | 1.35208972892599e-198 |
72 | 11 | NPCc | Nephron progenitor cells c | wk11 | CITED1 | 4435 | 1986 | 0.88 | 0.51 | 0.07 | 9.49923547305053e-219 | 3.20067240028965e-214 |
72 | 11 | NPCc | Nephron progenitor cells c | wk11 | HOXB9 | 3219 | 5120 | 0.87 | 0.61 | 0.15 | 3.04617043234483e-175 | 1.02637666547427e-170 |
72 | 11 | NPCc | Nephron progenitor cells c | wk11 | EYA1 | 2138 | 3519 | 0.87 | 0.63 | 0.12 | 2.30705863936697e-227 | 7.77340337948306e-223 |
72 | 11 | NPCc | Nephron progenitor cells c | wk11 | HLA-DQB1 | 3119 | 4944 | 0.83 | 0.52 | 0.09 | 6.00258342230254e-186 | 2.02251045831062e-181 |
72 | 11 | NPCc | Nephron progenitor cells c | wk11 | NKAIN3 | 286183 | 26829 | 0.82 | 0.62 | 0.13 | 1.07257480096437e-205 | 3.61393353436935e-201 |
72 | 11 | NPCc | Nephron progenitor cells c | wk11 | SLC15A1 | 6564 | 10920 | 0.8 | 0.43 | 0.08 | 4.98357358152818e-141 | 1.6791652825601e-136 |
72 | 11 | NPCc | Nephron progenitor cells c | wk11 | LRATD1 | 151354 | 20743 | 0.78 | 0.52 | 0.17 | 5.24346840229878e-109 | 1.76673424347055e-104 |
72 | 11 | NPCc | Nephron progenitor cells c | wk11 | PRXL2A | 84293 | 28651 | 0.78 | 0.88 | 0.55 | 3.57363795300416e-132 | 1.20410157188522e-127 |
72 | 11 | NPCc | Nephron progenitor cells c | wk11 | IGF2 | 3481 | 5466 | 0.77 | 0.97 | 0.48 | 3.04152087431763e-168 | 1.02481004339258e-163 |
72 | 11 | NPCc | Nephron progenitor cells c | wk11 | NTRK2 | 4915 | 8032 | 0.76 | 0.71 | 0.39 | 9.05890299210632e-86 | 3.0523067741603e-81 |
72 | 11 | NPCc | Nephron progenitor cells c | wk11 | SCG5 | 6447 | 10816 | 0.75 | 0.6 | 0.17 | 1.94236560307206e-148 | 6.54460666299099e-144 |
72 | 11 | NPCc | Nephron progenitor cells c | wk11 | MEOX1 | 4222 | 7013 | 0.75 | 0.48 | 0.08 | 4.73896791346883e-173 | 1.59674784876419e-168 |
72 | 11 | NPCc | Nephron progenitor cells c | wk11 | TUBA1A | 7846 | 20766 | 0.74 | 0.97 | 0.74 | 1.4356163209854e-137 | 4.83716563192821e-133 |
72 | 11 | NPCc | Nephron progenitor cells c | wk11 | UHRF1 | 29128 | 12556 | 0.72 | 0.53 | 0.17 | 2.48462151708293e-108 | 8.37168373965924e-104 |
72 | 11 | NPCc | Nephron progenitor cells c | wk11 | MARCKSL1 | 65108 | 7142 | 0.72 | 1 | 0.88 | 2.22931381476547e-195 | 7.51144996747078e-191 |
72 | 11 | NPCc | Nephron progenitor cells c | wk11 | SHISA3 | 152573 | 25159 | 0.72 | 0.57 | 0.18 | 6.77874237772072e-118 | 2.28402945674922e-113 |
72 | 11 | NPCc | Nephron progenitor cells c | wk11 | COL2A1 | 1280 | 2200 | 0.69 | 0.58 | 0.17 | 1.23181994712308e-132 | 4.15049412983651e-128 |
72 | 11 | NPCc | Nephron progenitor cells c | wk11 | MCM7 | 4176 | 6950 | 0.69 | 0.69 | 0.33 | 1.37269182519431e-95 | 4.62514783580972e-91 |
72 | 11 | NPCc | Nephron progenitor cells c | wk11 | PCSK1N | 27344 | 17301 | 0.68 | 0.61 | 0.23 | 1.12883676988326e-108 | 3.80350261244466e-104 |
72 | 11 | NPCc | Nephron progenitor cells c | wk11 | MEIS2 | 4212 | 7001 | 0.67 | 0.73 | 0.32 | 8.98923603660979e-114 | 3.0288331901753e-109 |
72 | 11 | NPCc | Nephron progenitor cells c | wk11 | CENPV | 201161 | 29920 | 0.67 | 0.7 | 0.36 | 3.81414180362467e-89 | 1.2851369393133e-84 |
72 | 11 | NPCc | Nephron progenitor cells c | wk11 | PAX2 | 5076 | 8616 | 0.67 | 0.71 | 0.34 | 7.13795506279275e-97 | 2.40506257885739e-92 |
72 | 11 | NPCc | Nephron progenitor cells c | wk11 | BMPER | 168667 | 24154 | 0.66 | 0.46 | 0.1 | 2.34081077419322e-128 | 7.88712782256662e-124 |
72 | 11 | NPCc | Nephron progenitor cells c | wk11 | SOX11 | 6664 | 11191 | 0.64 | 0.62 | 0.36 | 1.38356982549229e-59 | 4.66180017001374e-55 |
72 | 11 | NPCc | Nephron progenitor cells c | wk11 | SINHCAF | 58516 | 30702 | 0.64 | 0.85 | 0.52 | 3.42807776336319e-99 | 1.15505652158759e-94 |
72 | 11 | NPCc | Nephron progenitor cells c | wk11 | UCHL1 | 7345 | 12513 | 0.64 | 0.61 | 0.28 | 3.63144822893816e-85 | 1.22358016625842e-80 |
72 | 11 | NPCc | Nephron progenitor cells c | wk11 | COL9A2 | 1298 | 2218 | 0.63 | 0.47 | 0.13 | 9.34348688872507e-108 | 3.14819447228702e-103 |
72 | 11 | NPCc | Nephron progenitor cells c | wk11 | SIX2 | 10736 | 10888 | 0.63 | 0.45 | 0.09 | 5.72291332094317e-132 | 1.92827841435859e-127 |
72 | 11 | NPCc | Nephron progenitor cells c | wk11 | RBP1 | 5947 | 9919 | 0.62 | 0.93 | 0.49 | 8.38528103745741e-117 | 2.8253365927609e-112 |
72 | 11 | NPCc | Nephron progenitor cells c | wk11 | NASP | 4678 | 7644 | 0.62 | 0.82 | 0.55 | 7.15877518080454e-85 | 2.41207770942028e-80 |
72 | 11 | NPCc | Nephron progenitor cells c | wk11 | CENPW | 387103 | 21488 | 0.61 | 0.48 | 0.18 | 6.07377491249893e-79 | 2.04649771901739e-74 |
72 | 11 | NPCc | Nephron progenitor cells c | wk11 | SEPTIN6 | 23157 | 15848 | 0.6 | 0.66 | 0.33 | 8.3138958731091e-83 | 2.80128407548538e-78 |
72 | 11 | NPCc | Nephron progenitor cells c | wk11 | HOXB-AS3 | 404266 | 40283 | 0.6 | 0.4 | 0.13 | 5.45058971633046e-73 | 1.83652169902038e-68 |
72 | 11 | NPCc | Nephron progenitor cells c | wk11 | PHLDA1 | 22822 | 8933 | 0.6 | 0.64 | 0.27 | 6.32989335138681e-89 | 2.13279426581627e-84 |
72 | 11 | NPCc | Nephron progenitor cells c | wk11 | HAS2 | 3037 | 4819 | 0.6 | 0.41 | 0.1 | 4.32093592487244e-103 | 1.45589615052652e-98 |
72 | 11 | NPCc | Nephron progenitor cells c | wk11 | GINS2 | 51659 | 24575 | 0.59 | 0.46 | 0.18 | 1.89619311619199e-70 | 6.38903308569728e-66 |
72 | 11 | NPCc | Nephron progenitor cells c | wk11 | HOXC10 | 3226 | 5122 | 0.59 | 0.45 | 0.15 | 5.49116730705921e-83 | 1.85019391244053e-78 |
72 | 11 | NPCc | Nephron progenitor cells c | wk11 | MCM5 | 4174 | 6948 | 0.58 | 0.45 | 0.16 | 3.82148676395065e-82 | 1.28761175024553e-77 |
72 | 11 | NPCc | Nephron progenitor cells c | wk11 | HOXC6 | 3223 | 5128 | 0.58 | 0.48 | 0.15 | 2.41409474440708e-96 | 8.13405083180521e-92 |
72 | 11 | NPCc | Nephron progenitor cells c | wk11 | ETV4 | 2118 | 3493 | 0.57 | 0.41 | 0.12 | 2.71214743719547e-85 | 9.13830957488641e-81 |
72 | 11 | NPCc | Nephron progenitor cells c | wk11 | HMGA2 | 8091 | 5009 | 0.57 | 0.78 | 0.43 | 7.72883894490483e-79 | 2.60415499409623e-74 |
72 | 11 | NPCc | Nephron progenitor cells c | wk11 | MCM3 | 4172 | 6945 | 0.57 | 0.6 | 0.33 | 4.9455219459894e-58 | 1.66634416448167e-53 |
72 | 11 | NPCc | Nephron progenitor cells c | wk11 | ELAVL4 | 1996 | 3315 | 0.56 | 0.29 | 0.03 | 6.25281625150225e-132 | 2.10682390778117e-127 |
72 | 11 | NPCc | Nephron progenitor cells c | wk11 | WASF3 | 10810 | 12734 | 0.56 | 0.58 | 0.24 | 1.59374134779507e-82 | 5.36995209726072e-78 |
72 | 11 | NPCc | Nephron progenitor cells c | wk11 | SIX1 | 6495 | 10887 | 0.54 | 0.43 | 0.13 | 1.95439786254403e-84 | 6.58514815805587e-80 |
72 | 11 | NPCc | Nephron progenitor cells c | wk11 | MCM4 | 4173 | 6947 | 0.53 | 0.39 | 0.15 | 6.10648774028207e-60 | 2.05751997921064e-55 |
72 | 11 | NPCc | Nephron progenitor cells c | wk11 | ITGA8 | 8516 | 6144 | 0.53 | 0.37 | 0.08 | 5.37564131806971e-101 | 1.81126858571041e-96 |
72 | 11 | NPCc | Nephron progenitor cells c | wk11 | TRIL | 9865 | 22200 | 0.52 | 0.43 | 0.13 | 3.22260012968685e-84 | 1.08582288769669e-79 |
72 | 11 | NPCc | Nephron progenitor cells c | wk11 | DEK | 7913 | 2768 | 0.52 | 0.82 | 0.57 | 7.78167741464197e-64 | 2.62195838808947e-59 |
72 | 11 | NPCc | Nephron progenitor cells c | wk11 | PDGFC | 56034 | 8801 | 0.52 | 0.51 | 0.23 | 1.45295606165211e-63 | 4.89559015413063e-59 |
72 | 11 | NPCc | Nephron progenitor cells c | wk11 | MDK | 4192 | 6972 | 0.51 | 1 | 0.78 | 1.02997547056668e-100 | 3.47039935052739e-96 |
72 | 11 | NPCc | Nephron progenitor cells c | wk11 | PCNA | 5111 | 8729 | 0.51 | 0.6 | 0.35 | 9.33946795355998e-49 | 3.1468403322725e-44 |
72 | 11 | NPCc | Nephron progenitor cells c | wk11 | TMSB15A | 11013 | 30744 | 0.51 | 0.59 | 0.27 | 1.96257740689787e-65 | 6.61270831480168e-61 |
72 | 11 | NPCc | Nephron progenitor cells c | wk11 | STMN1 | 3925 | 6510 | 0.5 | 0.99 | 0.97 | 2.43860867080881e-133 | 8.21664805542322e-129 |
72 | 11 | NPCc | Nephron progenitor cells c | wk11 | PDLIM1 | 9124 | 2067 | 0.5 | 0.52 | 0.24 | 1.70814090146584e-60 | 5.755409953399e-56 |
72 | 11 | NPCc | Nephron progenitor cells c | wk11 | HNRNPA1 | 3178 | 5031 | 0.5 | 1 | 0.99 | 1.90192429039245e-144 | 6.40834370404831e-140 |
72 | 11 | NPCc | Nephron progenitor cells c | wk11 | MLLT11 | 10962 | 16997 | 0.5 | 0.66 | 0.34 | 7.06679754326805e-68 | 2.38108676422874e-63 |
72 | 11 | NPCc | Nephron progenitor cells c | wk11 | ECEL1 | 9427 | 3147 | 0.49 | 0.26 | 0.03 | 1.1196671222516e-104 | 3.77260640171453e-100 |
72 | 11 | NPCc | Nephron progenitor cells c | wk11 | MCM2 | 4171 | 6944 | 0.49 | 0.39 | 0.17 | 1.99644404306556e-50 | 6.72681855870508e-46 |
72 | 11 | NPCc | Nephron progenitor cells c | wk11 | NR2F1 | 7025 | 7975 | 0.48 | 0.72 | 0.46 | 1.20979266141509e-55 | 4.076275393372e-51 |
72 | 11 | NPCc | Nephron progenitor cells c | wk11 | CDH7 | 1005 | 1766 | 0.47 | 0.37 | 0.11 | 6.88656205225312e-72 | 2.32035821788617e-67 |
72 | 11 | NPCc | Nephron progenitor cells c | wk11 | UNG | 7374 | 12572 | 0.47 | 0.47 | 0.25 | 7.12294292699885e-41 | 2.40000438982299e-36 |
72 | 11 | NPCc | Nephron progenitor cells c | wk11 | PCBP4 | 57060 | 8652 | 0.47 | 0.5 | 0.23 | 2.40290084382926e-57 | 8.0963341031983e-53 |
72 | 11 | NPCc | Nephron progenitor cells c | wk11 | HOXA11 | 3207 | 5101 | 0.46 | 0.39 | 0.13 | 1.56636598439113e-65 | 5.27771354780748e-61 |
72 | 11 | NPCc | Nephron progenitor cells c | wk11 | H2AFY2 | 55506 | 14453 | 0.45 | 0.65 | 0.4 | 9.69208052537074e-53 | 3.26564961221842e-48 |
72 | 11 | NPCc | Nephron progenitor cells c | wk11 | RPS4X | 6191 | 10424 | 0.45 | 1 | 0.99 | 4.74151787812606e-145 | 1.5976070338558e-140 |
72 | 11 | NPCc | Nephron progenitor cells c | wk11 | HOXA10 | 3206 | 5100 | 0.44 | 0.82 | 0.59 | 1.30136046644621e-56 | 4.38480395564386e-52 |
72 | 11 | NPCc | Nephron progenitor cells c | wk11 | C1QTNF4 | 114900 | 14346 | 0.44 | 0.46 | 0.22 | 1.15265685368382e-49 | 3.88376200280225e-45 |
72 | 11 | NPCc | Nephron progenitor cells c | wk11 | GFRA1 | 2674 | 4243 | 0.44 | 0.25 | 0.04 | 5.32199825078156e-86 | 1.79319409061834e-81 |
72 | 11 | NPCc | Nephron progenitor cells c | wk11 | IGF2-AS | 51214 | 14062 | 0.44 | 0.29 | 0.07 | 1.88432929702005e-69 | 6.34905913337937e-65 |
72 | 11 | NPCc | Nephron progenitor cells c | wk11 | PSIP1 | 11168 | 9527 | 0.43 | 0.8 | 0.61 | 3.48492128697525e-49 | 1.17420937843344e-44 |
72 | 11 | NPCc | Nephron progenitor cells c | wk11 | AP1S2 | 8905 | 560 | 0.43 | 0.43 | 0.23 | 3.90950154655362e-35 | 1.31726745109578e-30 |
72 | 11 | NPCc | Nephron progenitor cells c | wk11 | MEIS1 | 4211 | 7000 | 0.43 | 0.49 | 0.18 | 8.64869923831725e-65 | 2.91409272135861e-60 |
72 | 11 | NPCc | Nephron progenitor cells c | wk11 | HMGB1 | 3146 | 4983 | 0.43 | 1 | 0.97 | 8.25625818637245e-102 | 2.78186363331633e-97 |
72 | 11 | NPCc | Nephron progenitor cells c | wk11 | SMARCC1 | 6599 | 11104 | 0.43 | 0.73 | 0.51 | 5.13460233022673e-46 | 1.73005290914659e-41 |
72 | 11 | NPCc | Nephron progenitor cells c | wk11 | DAPL1 | 92196 | 21490 | 0.43 | 0.23 | 0.06 | 2.82106453896583e-54 | 9.50529485759148e-50 |
72 | 11 | NPCc | Nephron progenitor cells c | wk11 | REC8 | 9985 | 16879 | 0.43 | 0.49 | 0.23 | 1.24363365022688e-51 | 4.19029922107446e-47 |
72 | 11 | NPCc | Nephron progenitor cells c | wk11 | PRDX2 | 7001 | 9353 | 0.43 | 0.95 | 0.8 | 6.38193751747285e-67 | 2.1503300271373e-62 |
72 | 11 | NPCc | Nephron progenitor cells c | wk11 | NME1 | 4830 | 7849 | 0.43 | 0.75 | 0.51 | 1.10866978680412e-50 | 3.73555197965781e-46 |
72 | 11 | NPCc | Nephron progenitor cells c | wk11 | CBX1 | 10951 | 1551 | 0.43 | 0.75 | 0.5 | 4.87688320410097e-49 | 1.64321702678978e-44 |
72 | 11 | NPCc | Nephron progenitor cells c | wk11 | OVOS2 | 144203 | NULL | 0.42 | 0.28 | 0.06 | 1.28872914311003e-81 | 4.34224397479494e-77 |
72 | 11 | NPCc | Nephron progenitor cells c | wk11 | NREP | 9315 | 16834 | 0.42 | 0.95 | 0.74 | 9.79430626845017e-74 | 3.3000935540916e-69 |
72 | 11 | NPCc | Nephron progenitor cells c | wk11 | OSR1 | 130497 | 8111 | 0.42 | 0.25 | 0.05 | 1.94316377763818e-77 | 6.54729603237407e-73 |
72 | 11 | NPCc | Nephron progenitor cells c | wk11 | FBLN1 | 2192 | 3600 | 0.42 | 0.63 | 0.35 | 3.75939247361225e-51 | 1.26668970005891e-46 |
72 | 11 | NPCc | Nephron progenitor cells c | wk11 | H2AFY | 9555 | 4740 | 0.42 | 0.82 | 0.63 | 2.88781797987067e-50 | 9.73021390137625e-46 |
72 | 11 | NPCc | Nephron progenitor cells c | wk11 | NPM3 | 10360 | 7931 | 0.42 | 0.47 | 0.25 | 3.9717185798417e-41 | 1.33823085829186e-36 |
72 | 11 | NPCc | Nephron progenitor cells c | wk11 | PARP1 | 142 | 270 | 0.41 | 0.71 | 0.52 | 4.11769491284685e-37 | 1.38741612393462e-32 |
72 | 11 | NPCc | Nephron progenitor cells c | wk11 | HOXB2 | 3212 | 5113 | 0.41 | 0.5 | 0.28 | 3.99138020566076e-38 | 1.34485564649533e-33 |
72 | 11 | NPCc | Nephron progenitor cells c | wk11 | G6PD | 2539 | 4057 | 0.41 | 0.39 | 0.18 | 3.83773117982344e-43 | 1.29308514372971e-38 |
72 | 11 | NPCc | Nephron progenitor cells c | wk11 | ENSG00000272763 | NULL | 0.41 | 0.25 | 0.04 | 3.05116528569064e-88 | 1.0280596313606e-83 | |
72 | 11 | NPCc | Nephron progenitor cells c | wk11 | BCL7A | 605 | 1004 | 0.41 | 0.42 | 0.21 | 2.82625211393231e-41 | 9.52277387268352e-37 |
72 | 11 | NPCc | Nephron progenitor cells c | wk11 | TNFRSF19 | 55504 | 11915 | 0.41 | 0.36 | 0.15 | 8.74338235391895e-46 | 2.94599525032945e-41 |
72 | 11 | NPCc | Nephron progenitor cells c | wk11 | CTSB | 1508 | 2527 | 0.41 | 0.67 | 0.47 | 1.7193333197588e-30 | 5.79312168759531e-26 |
72 | 11 | NPCc | Nephron progenitor cells c | wk11 | RANBP1 | 5902 | 9847 | 0.41 | 0.89 | 0.72 | 1.25754816353933e-57 | 4.2371827822294e-53 |
72 | 11 | NPCc | Nephron progenitor cells c | wk11 | HELLS | 3070 | 4861 | 0.41 | 0.38 | 0.18 | 4.87294797414975e-38 | 1.64189109041002e-33 |