Marker Genes
Dataset: Single-cell transcriptomics reveals gene expression dynamics of human fetal kidney development
- tissue: Kidney
- ontology: Kidney
- genotype: -
- stage: Fetal
- treatment condition: WT
- cell/nucleus: Cells
- pmid: 30789893
- subset name: wk11
- total genes: Not reported
- clustering: scran
- pseudotime: Monocle 2
- link: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE114530
Rows:100
| dataset id | cluster id | cluster name | cell type name | sample id | gene symbol | entrez geneid | species specific geneid |
avg log fc (?)
|
pct 1 | pct 2 | p value | padj |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 72 | 11 | NPCc | Nephron progenitor cells c | wk11 | CRABP2 | 1382 | 2339 | 1.46 | 0.91 | 0.24 | 0 | 0 |
| 72 | 11 | NPCc | Nephron progenitor cells c | wk11 | NNAT | 4826 | 7860 | 1.17 | 0.83 | 0.24 | 8.3735374094678E-251 | 2.8213796947461E-246 |
| 72 | 11 | NPCc | Nephron progenitor cells c | wk11 | LYPD1 | 116372 | 28431 | 0.97 | 0.8 | 0.24 | 3.0495754202279E-198 | 1.0275239420916E-193 |
| 72 | 11 | NPCc | Nephron progenitor cells c | wk11 | TMEM100 | 55273 | 25607 | 0.96 | 0.63 | 0.22 | 3.0089636618742E-130 | 1.0138402162319E-125 |
| 72 | 11 | NPCc | Nephron progenitor cells c | wk11 | RSPO3 | 84870 | 20866 | 0.93 | 0.6 | 0.12 | 4.0128501481747E-203 | 1.352089728926E-198 |
| 72 | 11 | NPCc | Nephron progenitor cells c | wk11 | CITED1 | 4435 | 1986 | 0.88 | 0.51 | 0.07 | 9.4992354730505E-219 | 3.2006724002897E-214 |
| 72 | 11 | NPCc | Nephron progenitor cells c | wk11 | HOXB9 | 3219 | 5120 | 0.87 | 0.61 | 0.15 | 3.0461704323448E-175 | 1.0263766654743E-170 |
| 72 | 11 | NPCc | Nephron progenitor cells c | wk11 | EYA1 | 2138 | 3519 | 0.87 | 0.63 | 0.12 | 2.307058639367E-227 | 7.7734033794831E-223 |
| 72 | 11 | NPCc | Nephron progenitor cells c | wk11 | HLA-DQB1 | 3119 | 4944 | 0.83 | 0.52 | 0.09 | 6.0025834223025E-186 | 2.0225104583106E-181 |
| 72 | 11 | NPCc | Nephron progenitor cells c | wk11 | NKAIN3 | 286183 | 26829 | 0.82 | 0.62 | 0.13 | 1.0725748009644E-205 | 3.6139335343693E-201 |
| 72 | 11 | NPCc | Nephron progenitor cells c | wk11 | SLC15A1 | 6564 | 10920 | 0.8 | 0.43 | 0.08 | 4.9835735815282E-141 | 1.6791652825601E-136 |
| 72 | 11 | NPCc | Nephron progenitor cells c | wk11 | LRATD1 | 151354 | 20743 | 0.78 | 0.52 | 0.17 | 5.2434684022988E-109 | 1.7667342434705E-104 |
| 72 | 11 | NPCc | Nephron progenitor cells c | wk11 | PRXL2A | 84293 | 28651 | 0.78 | 0.88 | 0.55 | 3.5736379530042E-132 | 1.2041015718852E-127 |
| 72 | 11 | NPCc | Nephron progenitor cells c | wk11 | IGF2 | 3481 | 5466 | 0.77 | 0.97 | 0.48 | 3.0415208743176E-168 | 1.0248100433926E-163 |
| 72 | 11 | NPCc | Nephron progenitor cells c | wk11 | NTRK2 | 4915 | 8032 | 0.76 | 0.71 | 0.39 | 9.0589029921063E-86 | 3.0523067741603E-81 |
| 72 | 11 | NPCc | Nephron progenitor cells c | wk11 | SCG5 | 6447 | 10816 | 0.75 | 0.6 | 0.17 | 1.9423656030721E-148 | 6.544606662991E-144 |
| 72 | 11 | NPCc | Nephron progenitor cells c | wk11 | MEOX1 | 4222 | 7013 | 0.75 | 0.48 | 0.08 | 4.7389679134688E-173 | 1.5967478487642E-168 |
| 72 | 11 | NPCc | Nephron progenitor cells c | wk11 | TUBA1A | 7846 | 20766 | 0.74 | 0.97 | 0.74 | 1.4356163209854E-137 | 4.8371656319282E-133 |
| 72 | 11 | NPCc | Nephron progenitor cells c | wk11 | UHRF1 | 29128 | 12556 | 0.72 | 0.53 | 0.17 | 2.4846215170829E-108 | 8.3716837396592E-104 |
| 72 | 11 | NPCc | Nephron progenitor cells c | wk11 | MARCKSL1 | 65108 | 7142 | 0.72 | 1 | 0.88 | 2.2293138147655E-195 | 7.5114499674708E-191 |
| 72 | 11 | NPCc | Nephron progenitor cells c | wk11 | SHISA3 | 152573 | 25159 | 0.72 | 0.57 | 0.18 | 6.7787423777207E-118 | 2.2840294567492E-113 |
| 72 | 11 | NPCc | Nephron progenitor cells c | wk11 | COL2A1 | 1280 | 2200 | 0.69 | 0.58 | 0.17 | 1.2318199471231E-132 | 4.1504941298365E-128 |
| 72 | 11 | NPCc | Nephron progenitor cells c | wk11 | MCM7 | 4176 | 6950 | 0.69 | 0.69 | 0.33 | 1.3726918251943E-95 | 4.6251478358097E-91 |
| 72 | 11 | NPCc | Nephron progenitor cells c | wk11 | PCSK1N | 27344 | 17301 | 0.68 | 0.61 | 0.23 | 1.1288367698833E-108 | 3.8035026124447E-104 |
| 72 | 11 | NPCc | Nephron progenitor cells c | wk11 | MEIS2 | 4212 | 7001 | 0.67 | 0.73 | 0.32 | 8.9892360366098E-114 | 3.0288331901753E-109 |
| 72 | 11 | NPCc | Nephron progenitor cells c | wk11 | CENPV | 201161 | 29920 | 0.67 | 0.7 | 0.36 | 3.8141418036247E-89 | 1.2851369393133E-84 |
| 72 | 11 | NPCc | Nephron progenitor cells c | wk11 | PAX2 | 5076 | 8616 | 0.67 | 0.71 | 0.34 | 7.1379550627927E-97 | 2.4050625788574E-92 |
| 72 | 11 | NPCc | Nephron progenitor cells c | wk11 | BMPER | 168667 | 24154 | 0.66 | 0.46 | 0.1 | 2.3408107741932E-128 | 7.8871278225666E-124 |
| 72 | 11 | NPCc | Nephron progenitor cells c | wk11 | SOX11 | 6664 | 11191 | 0.64 | 0.62 | 0.36 | 1.3835698254923E-59 | 4.6618001700137E-55 |
| 72 | 11 | NPCc | Nephron progenitor cells c | wk11 | SINHCAF | 58516 | 30702 | 0.64 | 0.85 | 0.52 | 3.4280777633632E-99 | 1.1550565215876E-94 |
| 72 | 11 | NPCc | Nephron progenitor cells c | wk11 | UCHL1 | 7345 | 12513 | 0.64 | 0.61 | 0.28 | 3.6314482289382E-85 | 1.2235801662584E-80 |
| 72 | 11 | NPCc | Nephron progenitor cells c | wk11 | COL9A2 | 1298 | 2218 | 0.63 | 0.47 | 0.13 | 9.3434868887251E-108 | 3.148194472287E-103 |
| 72 | 11 | NPCc | Nephron progenitor cells c | wk11 | SIX2 | 10736 | 10888 | 0.63 | 0.45 | 0.09 | 5.7229133209432E-132 | 1.9282784143586E-127 |
| 72 | 11 | NPCc | Nephron progenitor cells c | wk11 | RBP1 | 5947 | 9919 | 0.62 | 0.93 | 0.49 | 8.3852810374574E-117 | 2.8253365927609E-112 |
| 72 | 11 | NPCc | Nephron progenitor cells c | wk11 | NASP | 4678 | 7644 | 0.62 | 0.82 | 0.55 | 7.1587751808045E-85 | 2.4120777094203E-80 |
| 72 | 11 | NPCc | Nephron progenitor cells c | wk11 | CENPW | 387103 | 21488 | 0.61 | 0.48 | 0.18 | 6.0737749124989E-79 | 2.0464977190174E-74 |
| 72 | 11 | NPCc | Nephron progenitor cells c | wk11 | SEPTIN6 | 23157 | 15848 | 0.6 | 0.66 | 0.33 | 8.3138958731091E-83 | 2.8012840754854E-78 |
| 72 | 11 | NPCc | Nephron progenitor cells c | wk11 | HOXB-AS3 | 404266 | 40283 | 0.6 | 0.4 | 0.13 | 5.4505897163305E-73 | 1.8365216990204E-68 |
| 72 | 11 | NPCc | Nephron progenitor cells c | wk11 | PHLDA1 | 22822 | 8933 | 0.6 | 0.64 | 0.27 | 6.3298933513868E-89 | 2.1327942658163E-84 |
| 72 | 11 | NPCc | Nephron progenitor cells c | wk11 | HAS2 | 3037 | 4819 | 0.6 | 0.41 | 0.1 | 4.3209359248724E-103 | 1.4558961505265E-98 |
| 72 | 11 | NPCc | Nephron progenitor cells c | wk11 | GINS2 | 51659 | 24575 | 0.59 | 0.46 | 0.18 | 1.896193116192E-70 | 6.3890330856973E-66 |
| 72 | 11 | NPCc | Nephron progenitor cells c | wk11 | HOXC10 | 3226 | 5122 | 0.59 | 0.45 | 0.15 | 5.4911673070592E-83 | 1.8501939124405E-78 |
| 72 | 11 | NPCc | Nephron progenitor cells c | wk11 | MCM5 | 4174 | 6948 | 0.58 | 0.45 | 0.16 | 3.8214867639507E-82 | 1.2876117502455E-77 |
| 72 | 11 | NPCc | Nephron progenitor cells c | wk11 | HOXC6 | 3223 | 5128 | 0.58 | 0.48 | 0.15 | 2.4140947444071E-96 | 8.1340508318052E-92 |
| 72 | 11 | NPCc | Nephron progenitor cells c | wk11 | ETV4 | 2118 | 3493 | 0.57 | 0.41 | 0.12 | 2.7121474371955E-85 | 9.1383095748864E-81 |
| 72 | 11 | NPCc | Nephron progenitor cells c | wk11 | HMGA2 | 8091 | 5009 | 0.57 | 0.78 | 0.43 | 7.7288389449048E-79 | 2.6041549940962E-74 |
| 72 | 11 | NPCc | Nephron progenitor cells c | wk11 | MCM3 | 4172 | 6945 | 0.57 | 0.6 | 0.33 | 4.9455219459894E-58 | 1.6663441644817E-53 |
| 72 | 11 | NPCc | Nephron progenitor cells c | wk11 | ELAVL4 | 1996 | 3315 | 0.56 | 0.29 | 0.03 | 6.2528162515023E-132 | 2.1068239077812E-127 |
| 72 | 11 | NPCc | Nephron progenitor cells c | wk11 | WASF3 | 10810 | 12734 | 0.56 | 0.58 | 0.24 | 1.5937413477951E-82 | 5.3699520972607E-78 |
| 72 | 11 | NPCc | Nephron progenitor cells c | wk11 | SIX1 | 6495 | 10887 | 0.54 | 0.43 | 0.13 | 1.954397862544E-84 | 6.5851481580559E-80 |
| 72 | 11 | NPCc | Nephron progenitor cells c | wk11 | MCM4 | 4173 | 6947 | 0.53 | 0.39 | 0.15 | 6.1064877402821E-60 | 2.0575199792106E-55 |
| 72 | 11 | NPCc | Nephron progenitor cells c | wk11 | ITGA8 | 8516 | 6144 | 0.53 | 0.37 | 0.08 | 5.3756413180697E-101 | 1.8112685857104E-96 |
| 72 | 11 | NPCc | Nephron progenitor cells c | wk11 | TRIL | 9865 | 22200 | 0.52 | 0.43 | 0.13 | 3.2226001296869E-84 | 1.0858228876967E-79 |
| 72 | 11 | NPCc | Nephron progenitor cells c | wk11 | DEK | 7913 | 2768 | 0.52 | 0.82 | 0.57 | 7.781677414642E-64 | 2.6219583880895E-59 |
| 72 | 11 | NPCc | Nephron progenitor cells c | wk11 | PDGFC | 56034 | 8801 | 0.52 | 0.51 | 0.23 | 1.4529560616521E-63 | 4.8955901541306E-59 |
| 72 | 11 | NPCc | Nephron progenitor cells c | wk11 | MDK | 4192 | 6972 | 0.51 | 1 | 0.78 | 1.0299754705667E-100 | 3.4703993505274E-96 |
| 72 | 11 | NPCc | Nephron progenitor cells c | wk11 | PCNA | 5111 | 8729 | 0.51 | 0.6 | 0.35 | 9.33946795356E-49 | 3.1468403322725E-44 |
| 72 | 11 | NPCc | Nephron progenitor cells c | wk11 | TMSB15A | 11013 | 30744 | 0.51 | 0.59 | 0.27 | 1.9625774068979E-65 | 6.6127083148017E-61 |
| 72 | 11 | NPCc | Nephron progenitor cells c | wk11 | STMN1 | 3925 | 6510 | 0.5 | 0.99 | 0.97 | 2.4386086708088E-133 | 8.2166480554232E-129 |
| 72 | 11 | NPCc | Nephron progenitor cells c | wk11 | PDLIM1 | 9124 | 2067 | 0.5 | 0.52 | 0.24 | 1.7081409014658E-60 | 5.755409953399E-56 |
| 72 | 11 | NPCc | Nephron progenitor cells c | wk11 | HNRNPA1 | 3178 | 5031 | 0.5 | 1 | 0.99 | 1.9019242903924E-144 | 6.4083437040483E-140 |
| 72 | 11 | NPCc | Nephron progenitor cells c | wk11 | MLLT11 | 10962 | 16997 | 0.5 | 0.66 | 0.34 | 7.0667975432681E-68 | 2.3810867642287E-63 |
| 72 | 11 | NPCc | Nephron progenitor cells c | wk11 | ECEL1 | 9427 | 3147 | 0.49 | 0.26 | 0.03 | 1.1196671222516E-104 | 3.7726064017145E-100 |
| 72 | 11 | NPCc | Nephron progenitor cells c | wk11 | MCM2 | 4171 | 6944 | 0.49 | 0.39 | 0.17 | 1.9964440430656E-50 | 6.7268185587051E-46 |
| 72 | 11 | NPCc | Nephron progenitor cells c | wk11 | NR2F1 | 7025 | 7975 | 0.48 | 0.72 | 0.46 | 1.2097926614151E-55 | 4.076275393372E-51 |
| 72 | 11 | NPCc | Nephron progenitor cells c | wk11 | CDH7 | 1005 | 1766 | 0.47 | 0.37 | 0.11 | 6.8865620522531E-72 | 2.3203582178862E-67 |
| 72 | 11 | NPCc | Nephron progenitor cells c | wk11 | UNG | 7374 | 12572 | 0.47 | 0.47 | 0.25 | 7.1229429269988E-41 | 2.400004389823E-36 |
| 72 | 11 | NPCc | Nephron progenitor cells c | wk11 | PCBP4 | 57060 | 8652 | 0.47 | 0.5 | 0.23 | 2.4029008438293E-57 | 8.0963341031983E-53 |
| 72 | 11 | NPCc | Nephron progenitor cells c | wk11 | HOXA11 | 3207 | 5101 | 0.46 | 0.39 | 0.13 | 1.5663659843911E-65 | 5.2777135478075E-61 |
| 72 | 11 | NPCc | Nephron progenitor cells c | wk11 | H2AFY2 | 55506 | 14453 | 0.45 | 0.65 | 0.4 | 9.6920805253707E-53 | 3.2656496122184E-48 |
| 72 | 11 | NPCc | Nephron progenitor cells c | wk11 | RPS4X | 6191 | 10424 | 0.45 | 1 | 0.99 | 4.7415178781261E-145 | 1.5976070338558E-140 |
| 72 | 11 | NPCc | Nephron progenitor cells c | wk11 | HOXA10 | 3206 | 5100 | 0.44 | 0.82 | 0.59 | 1.3013604664462E-56 | 4.3848039556439E-52 |
| 72 | 11 | NPCc | Nephron progenitor cells c | wk11 | C1QTNF4 | 114900 | 14346 | 0.44 | 0.46 | 0.22 | 1.1526568536838E-49 | 3.8837620028023E-45 |
| 72 | 11 | NPCc | Nephron progenitor cells c | wk11 | GFRA1 | 2674 | 4243 | 0.44 | 0.25 | 0.04 | 5.3219982507816E-86 | 1.7931940906183E-81 |
| 72 | 11 | NPCc | Nephron progenitor cells c | wk11 | IGF2-AS | 51214 | 14062 | 0.44 | 0.29 | 0.07 | 1.8843292970201E-69 | 6.3490591333794E-65 |
| 72 | 11 | NPCc | Nephron progenitor cells c | wk11 | PSIP1 | 11168 | 9527 | 0.43 | 0.8 | 0.61 | 3.4849212869752E-49 | 1.1742093784334E-44 |
| 72 | 11 | NPCc | Nephron progenitor cells c | wk11 | AP1S2 | 8905 | 560 | 0.43 | 0.43 | 0.23 | 3.9095015465536E-35 | 1.3172674510958E-30 |
| 72 | 11 | NPCc | Nephron progenitor cells c | wk11 | MEIS1 | 4211 | 7000 | 0.43 | 0.49 | 0.18 | 8.6486992383173E-65 | 2.9140927213586E-60 |
| 72 | 11 | NPCc | Nephron progenitor cells c | wk11 | HMGB1 | 3146 | 4983 | 0.43 | 1 | 0.97 | 8.2562581863725E-102 | 2.7818636333163E-97 |
| 72 | 11 | NPCc | Nephron progenitor cells c | wk11 | SMARCC1 | 6599 | 11104 | 0.43 | 0.73 | 0.51 | 5.1346023302267E-46 | 1.7300529091466E-41 |
| 72 | 11 | NPCc | Nephron progenitor cells c | wk11 | DAPL1 | 92196 | 21490 | 0.43 | 0.23 | 0.06 | 2.8210645389658E-54 | 9.5052948575915E-50 |
| 72 | 11 | NPCc | Nephron progenitor cells c | wk11 | REC8 | 9985 | 16879 | 0.43 | 0.49 | 0.23 | 1.2436336502269E-51 | 4.1902992210745E-47 |
| 72 | 11 | NPCc | Nephron progenitor cells c | wk11 | PRDX2 | 7001 | 9353 | 0.43 | 0.95 | 0.8 | 6.3819375174728E-67 | 2.1503300271373E-62 |
| 72 | 11 | NPCc | Nephron progenitor cells c | wk11 | NME1 | 4830 | 7849 | 0.43 | 0.75 | 0.51 | 1.1086697868041E-50 | 3.7355519796578E-46 |
| 72 | 11 | NPCc | Nephron progenitor cells c | wk11 | CBX1 | 10951 | 1551 | 0.43 | 0.75 | 0.5 | 4.876883204101E-49 | 1.6432170267898E-44 |
| 72 | 11 | NPCc | Nephron progenitor cells c | wk11 | OVOS2 | 144203 | NULL | 0.42 | 0.28 | 0.06 | 1.28872914311E-81 | 4.3422439747949E-77 |
| 72 | 11 | NPCc | Nephron progenitor cells c | wk11 | NREP | 9315 | 16834 | 0.42 | 0.95 | 0.74 | 9.7943062684502E-74 | 3.3000935540916E-69 |
| 72 | 11 | NPCc | Nephron progenitor cells c | wk11 | OSR1 | 130497 | 8111 | 0.42 | 0.25 | 0.05 | 1.9431637776382E-77 | 6.5472960323741E-73 |
| 72 | 11 | NPCc | Nephron progenitor cells c | wk11 | FBLN1 | 2192 | 3600 | 0.42 | 0.63 | 0.35 | 3.7593924736122E-51 | 1.2666897000589E-46 |
| 72 | 11 | NPCc | Nephron progenitor cells c | wk11 | H2AFY | 9555 | 4740 | 0.42 | 0.82 | 0.63 | 2.8878179798707E-50 | 9.7302139013762E-46 |
| 72 | 11 | NPCc | Nephron progenitor cells c | wk11 | NPM3 | 10360 | 7931 | 0.42 | 0.47 | 0.25 | 3.9717185798417E-41 | 1.3382308582919E-36 |
| 72 | 11 | NPCc | Nephron progenitor cells c | wk11 | PARP1 | 142 | 270 | 0.41 | 0.71 | 0.52 | 4.1176949128469E-37 | 1.3874161239346E-32 |
| 72 | 11 | NPCc | Nephron progenitor cells c | wk11 | HOXB2 | 3212 | 5113 | 0.41 | 0.5 | 0.28 | 3.9913802056608E-38 | 1.3448556464953E-33 |
| 72 | 11 | NPCc | Nephron progenitor cells c | wk11 | G6PD | 2539 | 4057 | 0.41 | 0.39 | 0.18 | 3.8377311798234E-43 | 1.2930851437297E-38 |
| 72 | 11 | NPCc | Nephron progenitor cells c | wk11 | ENSG00000272763 | NULL | 0.41 | 0.25 | 0.04 | 3.0511652856906E-88 | 1.0280596313606E-83 | |
| 72 | 11 | NPCc | Nephron progenitor cells c | wk11 | BCL7A | 605 | 1004 | 0.41 | 0.42 | 0.21 | 2.8262521139323E-41 | 9.5227738726835E-37 |
| 72 | 11 | NPCc | Nephron progenitor cells c | wk11 | TNFRSF19 | 55504 | 11915 | 0.41 | 0.36 | 0.15 | 8.743382353919E-46 | 2.9459952503295E-41 |
| 72 | 11 | NPCc | Nephron progenitor cells c | wk11 | CTSB | 1508 | 2527 | 0.41 | 0.67 | 0.47 | 1.7193333197588E-30 | 5.7931216875953E-26 |
| 72 | 11 | NPCc | Nephron progenitor cells c | wk11 | RANBP1 | 5902 | 9847 | 0.41 | 0.89 | 0.72 | 1.2575481635393E-57 | 4.2371827822294E-53 |
| 72 | 11 | NPCc | Nephron progenitor cells c | wk11 | HELLS | 3070 | 4861 | 0.41 | 0.38 | 0.18 | 4.8729479741497E-38 | 1.64189109041E-33 |