Marker Genes
Dataset: Single-cell transcriptomics reveals gene expression dynamics of human fetal kidney development
- tissue: Kidney
- ontology: Kidney
- genotype: -
- stage: Fetal
- treatment condition: WT
- cell/nucleus: Cells
- pmid: 30789893
- subset name: wk11
- total genes: Not reported
- clustering: scran
- pseudotime: Monocle 2
- link: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE114530
Rows:100
dataset id | cluster id | cluster name | cell type name | sample id | gene symbol | entrez geneid | species specific geneid |
avg log fc (?)
|
pct 1 | pct 2 | p value | padj |
---|---|---|---|---|---|---|---|---|---|---|---|---|
72 | 0 | CnT | Connecting tubule | wk11 | CXCL3 | 2921 | 4604 | 1.8 | 0.32 | 0.01 | 5.03727827700698e-30 | 1.69726054265473e-25 |
72 | 0 | CnT | Connecting tubule | wk11 | ALDH1A1 | 216 | 402 | 1.73 | 0.88 | 0.12 | 5.22330728409458e-34 | 1.75994115630283e-29 |
72 | 0 | CnT | Connecting tubule | wk11 | CLDN4 | 1364 | 2046 | 1.68 | 0.92 | 0.13 | 2.00098372339327e-35 | 6.74211455760128e-31 |
72 | 0 | CnT | Connecting tubule | wk11 | GATA3 | 2625 | 4172 | 1.61 | 0.88 | 0.02 | 1.5429092420753e-132 | 5.19867840024853e-128 |
72 | 0 | CnT | Connecting tubule | wk11 | ATF3 | 467 | 785 | 1.48 | 0.84 | 0.16 | 1.01305811089875e-23 | 3.41339799886226e-19 |
72 | 0 | CnT | Connecting tubule | wk11 | BCAT1 | 586 | 976 | 1.42 | 0.76 | 0.04 | 9.20182520402947e-63 | 3.10046298424569e-58 |
72 | 0 | CnT | Connecting tubule | wk11 | WFDC2 | 10406 | 15939 | 1.32 | 0.84 | 0.19 | 4.6523218550244e-19 | 1.56755332583192e-14 |
72 | 0 | CnT | Connecting tubule | wk11 | CCN1 | 3491 | 2654 | 1.28 | 0.92 | 0.61 | 1.09638407946871e-10 | 3.69415651736188e-06 |
72 | 0 | CnT | Connecting tubule | wk11 | TFAP2A | 7020 | 11742 | 1.26 | 0.76 | 0.02 | 1.19795943388922e-130 | 4.03640451654635e-126 |
72 | 0 | CnT | Connecting tubule | wk11 | KRT18 | 3875 | 6430 | 1.23 | 0.92 | 0.3 | 1.29799557474406e-16 | 4.37346628954263e-12 |
72 | 0 | CnT | Connecting tubule | wk11 | ELF3 | 1999 | 3318 | 1.21 | 0.84 | 0.13 | 2.02761847520467e-25 | 6.83185769035462e-21 |
72 | 0 | CnT | Connecting tubule | wk11 | MAL | 4118 | 6817 | 1.13 | 0.68 | 0.09 | 5.36980352272738e-23 | 1.80930159894776e-18 |
72 | 0 | CnT | Connecting tubule | wk11 | KRT8 | 3856 | 6446 | 1.13 | 0.92 | 0.25 | 2.07914871347636e-18 | 7.00548367518724e-14 |
72 | 0 | CnT | Connecting tubule | wk11 | NFKBIA | 4792 | 7797 | 1.11 | 0.84 | 0.48 | 2.52100889956705e-07 | 0.00849428738620122 |
72 | 0 | CnT | Connecting tubule | wk11 | CLDN3 | 1365 | 2045 | 1.06 | 0.88 | 0.24 | 4.38597600735385e-16 | 1.4778107559178e-11 |
72 | 0 | CnT | Connecting tubule | wk11 | RDH10 | 157506 | 19975 | 1.04 | 0.76 | 0.12 | 6.65092084665178e-24 | 2.24096127007085e-19 |
72 | 0 | CnT | Connecting tubule | wk11 | RASL11B | 65997 | 23804 | 1.04 | 0.64 | 0.15 | 5.16715419863355e-12 | 1.74102093568759e-07 |
72 | 0 | CnT | Connecting tubule | wk11 | TACSTD2 | 4070 | 11530 | 1.02 | 0.56 | 0.01 | 3.82403505276733e-96 | 1.28847037067942e-91 |
72 | 0 | CnT | Connecting tubule | wk11 | EPCAM | 4072 | 11529 | 0.98 | 0.8 | 0.39 | 1.74083056763514e-08 | 0.000586555451458983 |
72 | 0 | CnT | Connecting tubule | wk11 | AKR1B1 | 231 | 381 | 0.97 | 0.96 | 0.41 | 1.65668196563661e-10 | 5.58202421501599e-06 |
72 | 0 | CnT | Connecting tubule | wk11 | ZFP36 | 7538 | 12862 | 0.97 | 0.76 | 0.2 | 8.10271489681096e-13 | 2.73012875733149e-08 |
72 | 0 | CnT | Connecting tubule | wk11 | TUBB2B | 347733 | 30829 | 0.96 | 0.92 | 0.41 | 2.48078414208567e-11 | 8.35875408834346e-07 |
72 | 0 | CnT | Connecting tubule | wk11 | GATA2 | 2624 | 4171 | 0.93 | 0.6 | 0.03 | 1.34395417858288e-44 | 4.52831920931715e-40 |
72 | 0 | CnT | Connecting tubule | wk11 | CXCL2 | 2920 | 4603 | 0.9 | 0.2 | 0.01 | 2.9091255104835e-14 | 9.80200749502309e-10 |
72 | 0 | CnT | Connecting tubule | wk11 | SOCS3 | 9021 | 19391 | 0.9 | 0.76 | 0.37 | 9.81460292797534e-07 | 0.03 |
72 | 0 | CnT | Connecting tubule | wk11 | HMGA1 | 3159 | 5010 | 0.9 | 0.92 | 0.65 | 1.22479626063356e-08 | 0.000412682852057872 |
72 | 0 | CnT | Connecting tubule | wk11 | ADH1C | 126 | 251 | 0.89 | 0.6 | 0.005 | 4.79770249482059e-243 | 1.61653787860485e-238 |
72 | 0 | CnT | Connecting tubule | wk11 | ASCL2 | 430 | 739 | 0.86 | 0.32 | 0.006 | 8.24665882916864e-71 | 2.77862922590008e-66 |
72 | 0 | CnT | Connecting tubule | wk11 | MYO6 | 4646 | 7605 | 0.85 | 0.84 | 0.26 | 1.69506675583142e-12 | 5.71135792709839e-08 |
72 | 0 | CnT | Connecting tubule | wk11 | SH3YL1 | 26751 | 29546 | 0.83 | 0.68 | 0.14 | 4.12715298560951e-15 | 1.39060292697127e-10 |
72 | 0 | CnT | Connecting tubule | wk11 | MAL2 | 114569 | 13634 | 0.82 | 0.68 | 0.22 | 9.32614702386677e-09 | 0.000314235197822167 |
72 | 0 | CnT | Connecting tubule | wk11 | EMX2OS | 196047 | 18511 | 0.79 | 0.6 | 0.08 | 1.25326457923338e-19 | 4.22274967326895e-15 |
72 | 0 | CnT | Connecting tubule | wk11 | GSTM3 | 2947 | 4635 | 0.76 | 0.88 | 0.25 | 1.63659210413997e-12 | 5.5143334356892e-08 |
72 | 0 | CnT | Connecting tubule | wk11 | MECOM | 2122 | 3498 | 0.74 | 0.8 | 0.05 | 3.11486747118043e-50 | 1.04952344573953e-45 |
72 | 0 | CnT | Connecting tubule | wk11 | TPD52L1 | 7164 | 12006 | 0.73 | 0.72 | 0.11 | 7.01654043941787e-19 | 2.36415313565746e-14 |
72 | 0 | CnT | Connecting tubule | wk11 | EPB41L4A-AS1 | 114915 | 30749 | 0.73 | 0.96 | 0.38 | 1.21023356198647e-09 | 4.07776096375722e-05 |
72 | 0 | CnT | Connecting tubule | wk11 | CLDN7 | 1366 | 2049 | 0.72 | 0.72 | 0.13 | 3.2702447482024e-17 | 1.10187626545932e-12 |
72 | 0 | CnT | Connecting tubule | wk11 | LYPD6B | 130576 | 27018 | 0.71 | 0.56 | 0.05 | 4.62605362546371e-26 | 1.55870250856374e-21 |
72 | 0 | CnT | Connecting tubule | wk11 | EMX2 | 2018 | 3341 | 0.71 | 0.64 | 0.2 | 4.29918334124526e-08 | 0.00144856683499918 |
72 | 0 | CnT | Connecting tubule | wk11 | AP1M2 | 10053 | 558 | 0.7 | 0.68 | 0.07 | 1.73118814592319e-30 | 5.83306533887359e-26 |
72 | 0 | CnT | Connecting tubule | wk11 | SPINT1 | 6692 | 11246 | 0.68 | 0.6 | 0.12 | 5.81551755293779e-13 | 1.95948048428686e-08 |
72 | 0 | CnT | Connecting tubule | wk11 | EGR1 | 1958 | 3238 | 0.67 | 0.96 | 0.47 | 1.46824260616519e-07 | 0.00494709663721298 |
72 | 0 | CnT | Connecting tubule | wk11 | LINC01116 | 375295 | 49259 | 0.67 | 0.68 | 0.12 | 8.01509261796497e-16 | 2.70060530669712e-11 |
72 | 0 | CnT | Connecting tubule | wk11 | FAM181B | 220382 | 28512 | 0.67 | 0.48 | 0.01 | 2.12114976015773e-78 | 7.14700200187544e-74 |
72 | 0 | CnT | Connecting tubule | wk11 | RAB25 | 57111 | 18238 | 0.66 | 0.56 | 0.06 | 1.49029999755345e-23 | 5.02141681175658e-19 |
72 | 0 | CnT | Connecting tubule | wk11 | TBC1D9 | 23158 | 21710 | 0.66 | 0.48 | 0.04 | 6.24014459732997e-23 | 2.10255432062436e-18 |
72 | 0 | CnT | Connecting tubule | wk11 | MYC | 4609 | 7553 | 0.66 | 0.76 | 0.25 | 1.00747792526255e-08 | 0.000339459612137964 |
72 | 0 | CnT | Connecting tubule | wk11 | GPR160 | 26996 | 23693 | 0.65 | 0.4 | 0.01 | 1.15156335612693e-41 | 3.88007757213409e-37 |
72 | 0 | CnT | Connecting tubule | wk11 | PLEKHA1 | 59338 | 14335 | 0.65 | 0.8 | 0.31 | 2.00232159047266e-07 | 0.00674662236693859 |
72 | 0 | CnT | Connecting tubule | wk11 | ANXA11 | 311 | 535 | 0.65 | 0.72 | 0.19 | 7.9723506521707e-12 | 2.6862038287424e-07 |
72 | 0 | CnT | Connecting tubule | wk11 | FOS | 2353 | 3796 | 0.64 | 1 | 0.83 | 2.66530510121083e-07 | 0.00898047900801978 |
72 | 0 | CnT | Connecting tubule | wk11 | SLC12A2 | 6558 | 10911 | 0.64 | 0.52 | 0.12 | 2.45945636451876e-09 | 8.2868922746095e-05 |
72 | 0 | CnT | Connecting tubule | wk11 | MAFF | 23764 | 6780 | 0.64 | 0.68 | 0.17 | 2.78631352640805e-11 | 9.38820479587929e-07 |
72 | 0 | CnT | Connecting tubule | wk11 | ANXA3 | 306 | 541 | 0.63 | 0.24 | 0.04 | 6.01247743265895e-07 | 0.02 |
72 | 0 | CnT | Connecting tubule | wk11 | CEBPB | 1051 | 1834 | 0.63 | 0.76 | 0.15 | 1.30919008866167e-15 | 4.41118508473663e-11 |
72 | 0 | CnT | Connecting tubule | wk11 | RAC2 | 5880 | 9802 | 0.63 | 0.32 | 0.01 | 6.02487392552091e-49 | 2.03002102046501e-44 |
72 | 0 | CnT | Connecting tubule | wk11 | PRSS8 | 5652 | 9491 | 0.62 | 0.56 | 0.08 | 1.94865584850855e-17 | 6.5658010159647e-13 |
72 | 0 | CnT | Connecting tubule | wk11 | TBX3 | 6926 | 11602 | 0.62 | 0.56 | 0.05 | 7.28692840380847e-25 | 2.45525765637923e-20 |
72 | 0 | CnT | Connecting tubule | wk11 | OAT | 4942 | 8091 | 0.6 | 0.72 | 0.19 | 1.99147875894351e-10 | 6.71008853038427e-06 |
72 | 0 | CnT | Connecting tubule | wk11 | KRT17 | 3872 | 6427 | 0.6 | 0.24 | 0.002 | 5.7232655201593e-85 | 1.92839708436247e-80 |
72 | 0 | CnT | Connecting tubule | wk11 | DMKN | 93099 | 25063 | 0.6 | 0.68 | 0.15 | 1.86960825762112e-12 | 6.29945806322862e-08 |
72 | 0 | CnT | Connecting tubule | wk11 | RPS18 | 6222 | 10401 | 0.59 | 1 | 0.99 | 8.72384949166204e-11 | 2.93941384772061e-06 |
72 | 0 | CnT | Connecting tubule | wk11 | CNKSR3 | 154043 | 23034 | 0.59 | 0.68 | 0.25 | 5.19594323293893e-07 | 0.01 |
72 | 0 | CnT | Connecting tubule | wk11 | SOSTDC1 | 25928 | 21748 | 0.59 | 0.52 | 0.09 | 4.55109606526104e-12 | 1.53344630822905e-07 |
72 | 0 | CnT | Connecting tubule | wk11 | CCNL1 | 57018 | 20569 | 0.59 | 0.96 | 0.65 | 7.86139944836247e-07 | 0.02 |
72 | 0 | CnT | Connecting tubule | wk11 | POU3F4 | 5456 | 9217 | 0.58 | 0.4 | 0.003 | 1.87150038498694e-175 | 6.30583339717501e-171 |
72 | 0 | CnT | Connecting tubule | wk11 | LIMCH1 | 22998 | 29191 | 0.58 | 0.64 | 0.1 | 7.51235628313407e-16 | 2.53121332603919e-11 |
72 | 0 | CnT | Connecting tubule | wk11 | LHX1-DT | 102723471 | 53778 | 0.58 | 0.52 | 0.11 | 9.69826579415676e-11 | 3.26773367668318e-06 |
72 | 0 | CnT | Connecting tubule | wk11 | RASSF3 | 283349 | 14271 | 0.57 | 0.48 | 0.03 | 9.38615300892117e-30 | 3.1625703948259e-25 |
72 | 0 | CnT | Connecting tubule | wk11 | PHLDA1 | 22822 | 8933 | 0.57 | 0.8 | 0.32 | 6.273423023794e-07 | 0.02 |
72 | 0 | CnT | Connecting tubule | wk11 | HOXD8 | 3234 | 5139 | 0.57 | 0.64 | 0.2 | 1.27346188061713e-07 | 0.00429080246055135 |
72 | 0 | CnT | Connecting tubule | wk11 | RPS3 | 6188 | 10420 | 0.56 | 1 | 0.99 | 1.75758475995043e-10 | 5.92200609017699e-06 |
72 | 0 | CnT | Connecting tubule | wk11 | TESMIN | 9633 | 7446 | 0.56 | 0.48 | 0.04 | 9.78084437549974e-24 | 3.29555770388088e-19 |
72 | 0 | CnT | Connecting tubule | wk11 | CFI | 3426 | 5394 | 0.55 | 0.48 | 0.02 | 2.80686377225681e-39 | 9.45744679424211e-35 |
72 | 0 | CnT | Connecting tubule | wk11 | GAD2 | 2572 | 4093 | 0.55 | 0.36 | 0.006 | 9.88529962583472e-85 | 3.33075285592875e-80 |
72 | 0 | CnT | Connecting tubule | wk11 | EMX1 | 2016 | 3340 | 0.55 | 0.4 | 0.02 | 6.03892354452759e-30 | 2.03475489909313e-25 |
72 | 0 | CnT | Connecting tubule | wk11 | LHX1 | 3975 | 6593 | 0.55 | 0.64 | 0.19 | 6.35652105433944e-08 | 0.00214176620404913 |
72 | 0 | CnT | Connecting tubule | wk11 | RPLP1 | 6176 | 10372 | 0.55 | 1 | 0.99 | 2.79885023694915e-09 | 9.43044598837647e-05 |
72 | 0 | CnT | Connecting tubule | wk11 | TPD52 | 7163 | 12005 | 0.54 | 0.56 | 0.15 | 3.91052815687081e-08 | 0.00131761335717605 |
72 | 0 | CnT | Connecting tubule | wk11 | TMEM45B | 120224 | 25194 | 0.53 | 0.4 | 0.005 | 6.67299543775759e-120 | 2.24839908279804e-115 |
72 | 0 | CnT | Connecting tubule | wk11 | SCUBE3 | 222663 | 13655 | 0.53 | 0.4 | 0.1 | 5.86662218539963e-07 | 0.01 |
72 | 0 | CnT | Connecting tubule | wk11 | MRPL54 | 116541 | 16685 | 0.52 | 0.72 | 0.24 | 1.03251581081952e-07 | 0.00347895877297531 |
72 | 0 | CnT | Connecting tubule | wk11 | KLF3 | 51274 | 16516 | 0.52 | 0.56 | 0.16 | 3.74365129835677e-07 | 0.01 |
72 | 0 | CnT | Connecting tubule | wk11 | HSP90AB1 | 3326 | 5258 | 0.52 | 1 | 0.98 | 2.96687332033519e-08 | 0.00099965829655374 |
72 | 0 | CnT | Connecting tubule | wk11 | NPM1 | 4869 | 7910 | 0.51 | 1 | 0.98 | 2.93675976845251e-08 | 0.000989511836382389 |
72 | 0 | CnT | Connecting tubule | wk11 | CYYR1 | 116159 | 16274 | 0.5 | 0.68 | 0.24 | 3.92925031621011e-07 | 0.01 |
72 | 0 | CnT | Connecting tubule | wk11 | BLNK | 29760 | 14211 | 0.5 | 0.32 | 0.02 | 2.03270369862945e-21 | 6.84899184216206e-17 |
72 | 0 | CnT | Connecting tubule | wk11 | B3GNT2 | 10678 | 15629 | 0.5 | 0.44 | 0.07 | 2.8286110854171e-12 | 9.53072219120438e-08 |
72 | 0 | CnT | Connecting tubule | wk11 | RAB11FIP2 | 22841 | 29152 | 0.5 | 0.56 | 0.11 | 3.78852670326505e-11 | 1.27650618739812e-06 |
72 | 0 | CnT | Connecting tubule | wk11 | SLIT2 | 9353 | 11086 | 0.5 | 0.48 | 0.08 | 4.51407965199642e-12 | 1.52097399794367e-07 |
72 | 0 | CnT | Connecting tubule | wk11 | ST14 | 6768 | 11344 | 0.5 | 0.48 | 0.04 | 4.67458287815559e-23 | 1.57505395496575e-18 |
72 | 0 | CnT | Connecting tubule | wk11 | SORD | 6652 | 11184 | 0.49 | 0.64 | 0.11 | 7.82602207461377e-15 | 2.63689987782036e-10 |
72 | 0 | CnT | Connecting tubule | wk11 | RPL12 | 6136 | 10302 | 0.48 | 1 | 0.98 | 2.55111722538766e-07 | 0.00859573437922118 |
72 | 0 | CnT | Connecting tubule | wk11 | NEDD9 | 4739 | 7733 | 0.48 | 0.6 | 0.16 | 2.50674030988484e-08 | 0.0008446210800126 |
72 | 0 | CnT | Connecting tubule | wk11 | PRPS2 | 5634 | 9465 | 0.48 | 0.6 | 0.09 | 2.52555283321231e-16 | 8.50959771622557e-12 |
72 | 0 | CnT | Connecting tubule | wk11 | MOXD1 | 26002 | 21063 | 0.48 | 0.52 | 0.08 | 1.04107458108515e-12 | 3.50779669350832e-08 |
72 | 0 | CnT | Connecting tubule | wk11 | SPRY1 | 10252 | 11269 | 0.48 | 0.68 | 0.19 | 1.94224725189545e-08 | 0.000654420789053651 |
72 | 0 | CnT | Connecting tubule | wk11 | TSPAN1 | 10103 | 20657 | 0.48 | 0.4 | 0.01 | 1.03072402792996e-64 | 3.4729215397072e-60 |
72 | 0 | CnT | Connecting tubule | wk11 | TOP2B | 7155 | 11990 | 0.47 | 0.76 | 0.26 | 8.42120924859475e-08 | 0.00283744224422152 |
72 | 0 | CnT | Connecting tubule | wk11 | RPL31 | 6160 | 10334 | 0.47 | 1 | 0.94 | 1.04126810039891e-07 | 0.00350844873748409 |