Marker Genes
Dataset: Single-cell transcriptomics reveals gene expression dynamics of human fetal kidney development
- tissue: Kidney
- ontology: Kidney
- genotype: -
- stage: Fetal
- treatment condition: WT
- cell/nucleus: Cells
- pmid: 30789893
- subset name: wk11
- total genes: Not reported
- clustering: scran
- pseudotime: Monocle 2
- link: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE114530
Rows:100
| dataset id | cluster id | cluster name | cell type name | sample id | gene symbol | entrez geneid | species specific geneid |
avg log fc (?)
|
pct 1 | pct 2 | p value | padj |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 72 | 0 | CnT | Connecting tubule | wk11 | CXCL3 | 2921 | 4604 | 1.8 | 0.32 | 0.01 | 5.037278277007E-30 | 1.6972605426547E-25 |
| 72 | 0 | CnT | Connecting tubule | wk11 | ALDH1A1 | 216 | 402 | 1.73 | 0.88 | 0.12 | 5.2233072840946E-34 | 1.7599411563028E-29 |
| 72 | 0 | CnT | Connecting tubule | wk11 | CLDN4 | 1364 | 2046 | 1.68 | 0.92 | 0.13 | 2.0009837233933E-35 | 6.7421145576013E-31 |
| 72 | 0 | CnT | Connecting tubule | wk11 | GATA3 | 2625 | 4172 | 1.61 | 0.88 | 0.02 | 1.5429092420753E-132 | 5.1986784002485E-128 |
| 72 | 0 | CnT | Connecting tubule | wk11 | ATF3 | 467 | 785 | 1.48 | 0.84 | 0.16 | 1.0130581108987E-23 | 3.4133979988623E-19 |
| 72 | 0 | CnT | Connecting tubule | wk11 | BCAT1 | 586 | 976 | 1.42 | 0.76 | 0.04 | 9.2018252040295E-63 | 3.1004629842457E-58 |
| 72 | 0 | CnT | Connecting tubule | wk11 | WFDC2 | 10406 | 15939 | 1.32 | 0.84 | 0.19 | 4.6523218550244E-19 | 1.5675533258319E-14 |
| 72 | 0 | CnT | Connecting tubule | wk11 | CCN1 | 3491 | 2654 | 1.28 | 0.92 | 0.61 | 1.0963840794687E-10 | 3.6941565173619E-6 |
| 72 | 0 | CnT | Connecting tubule | wk11 | TFAP2A | 7020 | 11742 | 1.26 | 0.76 | 0.02 | 1.1979594338892E-130 | 4.0364045165464E-126 |
| 72 | 0 | CnT | Connecting tubule | wk11 | KRT18 | 3875 | 6430 | 1.23 | 0.92 | 0.3 | 1.2979955747441E-16 | 4.3734662895426E-12 |
| 72 | 0 | CnT | Connecting tubule | wk11 | ELF3 | 1999 | 3318 | 1.21 | 0.84 | 0.13 | 2.0276184752047E-25 | 6.8318576903546E-21 |
| 72 | 0 | CnT | Connecting tubule | wk11 | MAL | 4118 | 6817 | 1.13 | 0.68 | 0.09 | 5.3698035227274E-23 | 1.8093015989478E-18 |
| 72 | 0 | CnT | Connecting tubule | wk11 | KRT8 | 3856 | 6446 | 1.13 | 0.92 | 0.25 | 2.0791487134764E-18 | 7.0054836751872E-14 |
| 72 | 0 | CnT | Connecting tubule | wk11 | NFKBIA | 4792 | 7797 | 1.11 | 0.84 | 0.48 | 2.5210088995671E-7 | 0.0084942873862012 |
| 72 | 0 | CnT | Connecting tubule | wk11 | CLDN3 | 1365 | 2045 | 1.06 | 0.88 | 0.24 | 4.3859760073539E-16 | 1.4778107559178E-11 |
| 72 | 0 | CnT | Connecting tubule | wk11 | RDH10 | 157506 | 19975 | 1.04 | 0.76 | 0.12 | 6.6509208466518E-24 | 2.2409612700709E-19 |
| 72 | 0 | CnT | Connecting tubule | wk11 | RASL11B | 65997 | 23804 | 1.04 | 0.64 | 0.15 | 5.1671541986336E-12 | 1.7410209356876E-7 |
| 72 | 0 | CnT | Connecting tubule | wk11 | TACSTD2 | 4070 | 11530 | 1.02 | 0.56 | 0.01 | 3.8240350527673E-96 | 1.2884703706794E-91 |
| 72 | 0 | CnT | Connecting tubule | wk11 | EPCAM | 4072 | 11529 | 0.98 | 0.8 | 0.39 | 1.7408305676351E-8 | 0.00058655545145898 |
| 72 | 0 | CnT | Connecting tubule | wk11 | AKR1B1 | 231 | 381 | 0.97 | 0.96 | 0.41 | 1.6566819656366E-10 | 5.582024215016E-6 |
| 72 | 0 | CnT | Connecting tubule | wk11 | ZFP36 | 7538 | 12862 | 0.97 | 0.76 | 0.2 | 8.102714896811E-13 | 2.7301287573315E-8 |
| 72 | 0 | CnT | Connecting tubule | wk11 | TUBB2B | 347733 | 30829 | 0.96 | 0.92 | 0.41 | 2.4807841420857E-11 | 8.3587540883435E-7 |
| 72 | 0 | CnT | Connecting tubule | wk11 | GATA2 | 2624 | 4171 | 0.93 | 0.6 | 0.03 | 1.3439541785829E-44 | 4.5283192093172E-40 |
| 72 | 0 | CnT | Connecting tubule | wk11 | CXCL2 | 2920 | 4603 | 0.9 | 0.2 | 0.01 | 2.9091255104835E-14 | 9.8020074950231E-10 |
| 72 | 0 | CnT | Connecting tubule | wk11 | SOCS3 | 9021 | 19391 | 0.9 | 0.76 | 0.37 | 9.8146029279753E-7 | 0.03 |
| 72 | 0 | CnT | Connecting tubule | wk11 | HMGA1 | 3159 | 5010 | 0.9 | 0.92 | 0.65 | 1.2247962606336E-8 | 0.00041268285205787 |
| 72 | 0 | CnT | Connecting tubule | wk11 | ADH1C | 126 | 251 | 0.89 | 0.6 | 0.005 | 4.7977024948206E-243 | 1.6165378786048E-238 |
| 72 | 0 | CnT | Connecting tubule | wk11 | ASCL2 | 430 | 739 | 0.86 | 0.32 | 0.006 | 8.2466588291686E-71 | 2.7786292259001E-66 |
| 72 | 0 | CnT | Connecting tubule | wk11 | MYO6 | 4646 | 7605 | 0.85 | 0.84 | 0.26 | 1.6950667558314E-12 | 5.7113579270984E-8 |
| 72 | 0 | CnT | Connecting tubule | wk11 | SH3YL1 | 26751 | 29546 | 0.83 | 0.68 | 0.14 | 4.1271529856095E-15 | 1.3906029269713E-10 |
| 72 | 0 | CnT | Connecting tubule | wk11 | MAL2 | 114569 | 13634 | 0.82 | 0.68 | 0.22 | 9.3261470238668E-9 | 0.00031423519782217 |
| 72 | 0 | CnT | Connecting tubule | wk11 | EMX2OS | 196047 | 18511 | 0.79 | 0.6 | 0.08 | 1.2532645792334E-19 | 4.2227496732689E-15 |
| 72 | 0 | CnT | Connecting tubule | wk11 | GSTM3 | 2947 | 4635 | 0.76 | 0.88 | 0.25 | 1.63659210414E-12 | 5.5143334356892E-8 |
| 72 | 0 | CnT | Connecting tubule | wk11 | MECOM | 2122 | 3498 | 0.74 | 0.8 | 0.05 | 3.1148674711804E-50 | 1.0495234457395E-45 |
| 72 | 0 | CnT | Connecting tubule | wk11 | TPD52L1 | 7164 | 12006 | 0.73 | 0.72 | 0.11 | 7.0165404394179E-19 | 2.3641531356575E-14 |
| 72 | 0 | CnT | Connecting tubule | wk11 | EPB41L4A-AS1 | 114915 | 30749 | 0.73 | 0.96 | 0.38 | 1.2102335619865E-9 | 4.0777609637572E-5 |
| 72 | 0 | CnT | Connecting tubule | wk11 | CLDN7 | 1366 | 2049 | 0.72 | 0.72 | 0.13 | 3.2702447482024E-17 | 1.1018762654593E-12 |
| 72 | 0 | CnT | Connecting tubule | wk11 | LYPD6B | 130576 | 27018 | 0.71 | 0.56 | 0.05 | 4.6260536254637E-26 | 1.5587025085637E-21 |
| 72 | 0 | CnT | Connecting tubule | wk11 | EMX2 | 2018 | 3341 | 0.71 | 0.64 | 0.2 | 4.2991833412453E-8 | 0.0014485668349992 |
| 72 | 0 | CnT | Connecting tubule | wk11 | AP1M2 | 10053 | 558 | 0.7 | 0.68 | 0.07 | 1.7311881459232E-30 | 5.8330653388736E-26 |
| 72 | 0 | CnT | Connecting tubule | wk11 | SPINT1 | 6692 | 11246 | 0.68 | 0.6 | 0.12 | 5.8155175529378E-13 | 1.9594804842869E-8 |
| 72 | 0 | CnT | Connecting tubule | wk11 | EGR1 | 1958 | 3238 | 0.67 | 0.96 | 0.47 | 1.4682426061652E-7 | 0.004947096637213 |
| 72 | 0 | CnT | Connecting tubule | wk11 | LINC01116 | 375295 | 49259 | 0.67 | 0.68 | 0.12 | 8.015092617965E-16 | 2.7006053066971E-11 |
| 72 | 0 | CnT | Connecting tubule | wk11 | FAM181B | 220382 | 28512 | 0.67 | 0.48 | 0.01 | 2.1211497601577E-78 | 7.1470020018754E-74 |
| 72 | 0 | CnT | Connecting tubule | wk11 | RAB25 | 57111 | 18238 | 0.66 | 0.56 | 0.06 | 1.4902999975535E-23 | 5.0214168117566E-19 |
| 72 | 0 | CnT | Connecting tubule | wk11 | TBC1D9 | 23158 | 21710 | 0.66 | 0.48 | 0.04 | 6.24014459733E-23 | 2.1025543206244E-18 |
| 72 | 0 | CnT | Connecting tubule | wk11 | MYC | 4609 | 7553 | 0.66 | 0.76 | 0.25 | 1.0074779252626E-8 | 0.00033945961213796 |
| 72 | 0 | CnT | Connecting tubule | wk11 | GPR160 | 26996 | 23693 | 0.65 | 0.4 | 0.01 | 1.1515633561269E-41 | 3.8800775721341E-37 |
| 72 | 0 | CnT | Connecting tubule | wk11 | PLEKHA1 | 59338 | 14335 | 0.65 | 0.8 | 0.31 | 2.0023215904727E-7 | 0.0067466223669386 |
| 72 | 0 | CnT | Connecting tubule | wk11 | ANXA11 | 311 | 535 | 0.65 | 0.72 | 0.19 | 7.9723506521707E-12 | 2.6862038287424E-7 |
| 72 | 0 | CnT | Connecting tubule | wk11 | FOS | 2353 | 3796 | 0.64 | 1 | 0.83 | 2.6653051012108E-7 | 0.0089804790080198 |
| 72 | 0 | CnT | Connecting tubule | wk11 | SLC12A2 | 6558 | 10911 | 0.64 | 0.52 | 0.12 | 2.4594563645188E-9 | 8.2868922746095E-5 |
| 72 | 0 | CnT | Connecting tubule | wk11 | MAFF | 23764 | 6780 | 0.64 | 0.68 | 0.17 | 2.7863135264081E-11 | 9.3882047958793E-7 |
| 72 | 0 | CnT | Connecting tubule | wk11 | ANXA3 | 306 | 541 | 0.63 | 0.24 | 0.04 | 6.012477432659E-7 | 0.02 |
| 72 | 0 | CnT | Connecting tubule | wk11 | CEBPB | 1051 | 1834 | 0.63 | 0.76 | 0.15 | 1.3091900886617E-15 | 4.4111850847366E-11 |
| 72 | 0 | CnT | Connecting tubule | wk11 | RAC2 | 5880 | 9802 | 0.63 | 0.32 | 0.01 | 6.0248739255209E-49 | 2.030021020465E-44 |
| 72 | 0 | CnT | Connecting tubule | wk11 | PRSS8 | 5652 | 9491 | 0.62 | 0.56 | 0.08 | 1.9486558485085E-17 | 6.5658010159647E-13 |
| 72 | 0 | CnT | Connecting tubule | wk11 | TBX3 | 6926 | 11602 | 0.62 | 0.56 | 0.05 | 7.2869284038085E-25 | 2.4552576563792E-20 |
| 72 | 0 | CnT | Connecting tubule | wk11 | OAT | 4942 | 8091 | 0.6 | 0.72 | 0.19 | 1.9914787589435E-10 | 6.7100885303843E-6 |
| 72 | 0 | CnT | Connecting tubule | wk11 | KRT17 | 3872 | 6427 | 0.6 | 0.24 | 0.002 | 5.7232655201593E-85 | 1.9283970843625E-80 |
| 72 | 0 | CnT | Connecting tubule | wk11 | DMKN | 93099 | 25063 | 0.6 | 0.68 | 0.15 | 1.8696082576211E-12 | 6.2994580632286E-8 |
| 72 | 0 | CnT | Connecting tubule | wk11 | RPS18 | 6222 | 10401 | 0.59 | 1 | 0.99 | 8.723849491662E-11 | 2.9394138477206E-6 |
| 72 | 0 | CnT | Connecting tubule | wk11 | CNKSR3 | 154043 | 23034 | 0.59 | 0.68 | 0.25 | 5.1959432329389E-7 | 0.01 |
| 72 | 0 | CnT | Connecting tubule | wk11 | SOSTDC1 | 25928 | 21748 | 0.59 | 0.52 | 0.09 | 4.551096065261E-12 | 1.5334463082291E-7 |
| 72 | 0 | CnT | Connecting tubule | wk11 | CCNL1 | 57018 | 20569 | 0.59 | 0.96 | 0.65 | 7.8613994483625E-7 | 0.02 |
| 72 | 0 | CnT | Connecting tubule | wk11 | POU3F4 | 5456 | 9217 | 0.58 | 0.4 | 0.003 | 1.8715003849869E-175 | 6.305833397175E-171 |
| 72 | 0 | CnT | Connecting tubule | wk11 | LIMCH1 | 22998 | 29191 | 0.58 | 0.64 | 0.1 | 7.5123562831341E-16 | 2.5312133260392E-11 |
| 72 | 0 | CnT | Connecting tubule | wk11 | LHX1-DT | 102723471 | 53778 | 0.58 | 0.52 | 0.11 | 9.6982657941568E-11 | 3.2677336766832E-6 |
| 72 | 0 | CnT | Connecting tubule | wk11 | RASSF3 | 283349 | 14271 | 0.57 | 0.48 | 0.03 | 9.3861530089212E-30 | 3.1625703948259E-25 |
| 72 | 0 | CnT | Connecting tubule | wk11 | PHLDA1 | 22822 | 8933 | 0.57 | 0.8 | 0.32 | 6.273423023794E-7 | 0.02 |
| 72 | 0 | CnT | Connecting tubule | wk11 | HOXD8 | 3234 | 5139 | 0.57 | 0.64 | 0.2 | 1.2734618806171E-7 | 0.0042908024605514 |
| 72 | 0 | CnT | Connecting tubule | wk11 | RPS3 | 6188 | 10420 | 0.56 | 1 | 0.99 | 1.7575847599504E-10 | 5.922006090177E-6 |
| 72 | 0 | CnT | Connecting tubule | wk11 | TESMIN | 9633 | 7446 | 0.56 | 0.48 | 0.04 | 9.7808443754997E-24 | 3.2955577038809E-19 |
| 72 | 0 | CnT | Connecting tubule | wk11 | CFI | 3426 | 5394 | 0.55 | 0.48 | 0.02 | 2.8068637722568E-39 | 9.4574467942421E-35 |
| 72 | 0 | CnT | Connecting tubule | wk11 | GAD2 | 2572 | 4093 | 0.55 | 0.36 | 0.006 | 9.8852996258347E-85 | 3.3307528559288E-80 |
| 72 | 0 | CnT | Connecting tubule | wk11 | EMX1 | 2016 | 3340 | 0.55 | 0.4 | 0.02 | 6.0389235445276E-30 | 2.0347548990931E-25 |
| 72 | 0 | CnT | Connecting tubule | wk11 | LHX1 | 3975 | 6593 | 0.55 | 0.64 | 0.19 | 6.3565210543394E-8 | 0.0021417662040491 |
| 72 | 0 | CnT | Connecting tubule | wk11 | RPLP1 | 6176 | 10372 | 0.55 | 1 | 0.99 | 2.7988502369491E-9 | 9.4304459883765E-5 |
| 72 | 0 | CnT | Connecting tubule | wk11 | TPD52 | 7163 | 12005 | 0.54 | 0.56 | 0.15 | 3.9105281568708E-8 | 0.0013176133571761 |
| 72 | 0 | CnT | Connecting tubule | wk11 | TMEM45B | 120224 | 25194 | 0.53 | 0.4 | 0.005 | 6.6729954377576E-120 | 2.248399082798E-115 |
| 72 | 0 | CnT | Connecting tubule | wk11 | SCUBE3 | 222663 | 13655 | 0.53 | 0.4 | 0.1 | 5.8666221853996E-7 | 0.01 |
| 72 | 0 | CnT | Connecting tubule | wk11 | MRPL54 | 116541 | 16685 | 0.52 | 0.72 | 0.24 | 1.0325158108195E-7 | 0.0034789587729753 |
| 72 | 0 | CnT | Connecting tubule | wk11 | KLF3 | 51274 | 16516 | 0.52 | 0.56 | 0.16 | 3.7436512983568E-7 | 0.01 |
| 72 | 0 | CnT | Connecting tubule | wk11 | HSP90AB1 | 3326 | 5258 | 0.52 | 1 | 0.98 | 2.9668733203352E-8 | 0.00099965829655374 |
| 72 | 0 | CnT | Connecting tubule | wk11 | NPM1 | 4869 | 7910 | 0.51 | 1 | 0.98 | 2.9367597684525E-8 | 0.00098951183638239 |
| 72 | 0 | CnT | Connecting tubule | wk11 | CYYR1 | 116159 | 16274 | 0.5 | 0.68 | 0.24 | 3.9292503162101E-7 | 0.01 |
| 72 | 0 | CnT | Connecting tubule | wk11 | BLNK | 29760 | 14211 | 0.5 | 0.32 | 0.02 | 2.0327036986295E-21 | 6.8489918421621E-17 |
| 72 | 0 | CnT | Connecting tubule | wk11 | B3GNT2 | 10678 | 15629 | 0.5 | 0.44 | 0.07 | 2.8286110854171E-12 | 9.5307221912044E-8 |
| 72 | 0 | CnT | Connecting tubule | wk11 | RAB11FIP2 | 22841 | 29152 | 0.5 | 0.56 | 0.11 | 3.788526703265E-11 | 1.2765061873981E-6 |
| 72 | 0 | CnT | Connecting tubule | wk11 | SLIT2 | 9353 | 11086 | 0.5 | 0.48 | 0.08 | 4.5140796519964E-12 | 1.5209739979437E-7 |
| 72 | 0 | CnT | Connecting tubule | wk11 | ST14 | 6768 | 11344 | 0.5 | 0.48 | 0.04 | 4.6745828781556E-23 | 1.5750539549658E-18 |
| 72 | 0 | CnT | Connecting tubule | wk11 | SORD | 6652 | 11184 | 0.49 | 0.64 | 0.11 | 7.8260220746138E-15 | 2.6368998778204E-10 |
| 72 | 0 | CnT | Connecting tubule | wk11 | RPL12 | 6136 | 10302 | 0.48 | 1 | 0.98 | 2.5511172253877E-7 | 0.0085957343792212 |
| 72 | 0 | CnT | Connecting tubule | wk11 | NEDD9 | 4739 | 7733 | 0.48 | 0.6 | 0.16 | 2.5067403098848E-8 | 0.0008446210800126 |
| 72 | 0 | CnT | Connecting tubule | wk11 | PRPS2 | 5634 | 9465 | 0.48 | 0.6 | 0.09 | 2.5255528332123E-16 | 8.5095977162256E-12 |
| 72 | 0 | CnT | Connecting tubule | wk11 | MOXD1 | 26002 | 21063 | 0.48 | 0.52 | 0.08 | 1.0410745810852E-12 | 3.5077966935083E-8 |
| 72 | 0 | CnT | Connecting tubule | wk11 | SPRY1 | 10252 | 11269 | 0.48 | 0.68 | 0.19 | 1.9422472518954E-8 | 0.00065442078905365 |
| 72 | 0 | CnT | Connecting tubule | wk11 | TSPAN1 | 10103 | 20657 | 0.48 | 0.4 | 0.01 | 1.03072402793E-64 | 3.4729215397072E-60 |
| 72 | 0 | CnT | Connecting tubule | wk11 | TOP2B | 7155 | 11990 | 0.47 | 0.76 | 0.26 | 8.4212092485948E-8 | 0.0028374422442215 |
| 72 | 0 | CnT | Connecting tubule | wk11 | RPL31 | 6160 | 10334 | 0.47 | 1 | 0.94 | 1.0412681003989E-7 | 0.0035084487374841 |