Marker Genes
Dataset: Single-cell transcriptomics reveals gene expression dynamics of human fetal kidney development
- tissue: Kidney
- ontology: Kidney
- genotype: -
- stage: Fetal
- treatment condition: WT
- cell/nucleus: Cells
- pmid: 30789893
- subset name: wk09
- total genes: Not reported
- clustering: scran
- pseudotime: Monocle 2
- link: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE114530
Rows:18
| dataset id | cluster id | cluster name | cell type name | sample id | gene symbol | entrez geneid | species specific geneid |
avg log fc (?)
|
pct 1 | pct 2 | p value | padj |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 71 | 6 | IPC | Interstitial progenitor cell | wk09 | CLSPN | 63967 | 19715 | 0.97 | 1 | 0.14 | 1.09229757605745e-06 | 0.03 |
| 71 | 6 | IPC | Interstitial progenitor cell | wk09 | RUNX1T1 | 862 | 1535 | 0.9 | 0.75 | 0.03 | 3.52443670304411e-08 | 0.00118752370272368 |
| 71 | 6 | IPC | Interstitial progenitor cell | wk09 | RECQL4 | 9401 | 9949 | 0.85 | 0.75 | 0.02 | 6.41506333676392e-10 | 2.16149144068923e-05 |
| 71 | 6 | IPC | Interstitial progenitor cell | wk09 | ITPR2 | 3709 | 6181 | 0.8 | 0.75 | 0.04 | 9.67969241477546e-07 | 0.03 |
| 71 | 6 | IPC | Interstitial progenitor cell | wk09 | CPED1 | 79974 | 26159 | 0.73 | 1 | 0.1 | 1.21894880481312e-06 | 0.04 |
| 71 | 6 | IPC | Interstitial progenitor cell | wk09 | TATDN2 | 9797 | 28988 | 0.73 | 0.75 | 0.02 | 1.20638016467733e-09 | 4.0647773268638e-05 |
| 71 | 6 | IPC | Interstitial progenitor cell | wk09 | SMARCA2 | 6595 | 11098 | 0.73 | 0.75 | 0.03 | 2.7086315032298e-08 | 0.000912646298698248 |
| 71 | 6 | IPC | Interstitial progenitor cell | wk09 | BRCA1 | 672 | 1100 | 0.69 | 0.75 | 0.04 | 3.98020778363742e-07 | 0.01 |
| 71 | 6 | IPC | Interstitial progenitor cell | wk09 | CRYBG3 | 131544 | 34427 | 0.66 | 0.5 | 0 | 1.19188575826957e-10 | 4.0159398739135e-06 |
| 71 | 6 | IPC | Interstitial progenitor cell | wk09 | ENSG00000278276 | NULL | 0.64 | 0.5 | 0 | 1.19188575826957e-10 | 4.0159398739135e-06 | |
| 71 | 6 | IPC | Interstitial progenitor cell | wk09 | VSTM4 | 196740 | 26470 | 0.64 | 0.75 | 0.01 | 5.31266473405536e-12 | 1.79004925549261e-07 |
| 71 | 6 | IPC | Interstitial progenitor cell | wk09 | PMEPA1 | 56937 | 14107 | 0.6 | 0.75 | 0.04 | 6.22923002189442e-07 | 0.02 |
| 71 | 6 | IPC | Interstitial progenitor cell | wk09 | ENSG00000261353 | NULL | 0.52 | 0.5 | 0 | 1.19188575826957e-10 | 4.0159398739135e-06 | |
| 71 | 6 | IPC | Interstitial progenitor cell | wk09 | ENSG00000225889 | NULL | 0.51 | 0.5 | 0.01 | 2.45747913373548e-07 | 0.00828023019320831 | |
| 71 | 6 | IPC | Interstitial progenitor cell | wk09 | TCF19 | 6941 | 11629 | 0.48 | 0.75 | 0.04 | 1.20340848122365e-06 | 0.04 |
| 71 | 6 | IPC | Interstitial progenitor cell | wk09 | RFLNA | 144347 | 27051 | 0.38 | 0.5 | 0.01 | 3.45438154652068e-07 | 0.01 |
| 71 | 6 | IPC | Interstitial progenitor cell | wk09 | PHLDA2 | 7262 | 12385 | 0.37 | 0.5 | 0.01 | 1.74132451264902e-07 | 0.00586721881291962 |
| 71 | 6 | IPC | Interstitial progenitor cell | wk09 | TH | 7054 | 11782 | 0.37 | 0.5 | 0.01 | 1.74132451264902e-07 | 0.00586721881291962 |