Marker Genes
Dataset: Single-cell transcriptomics reveals gene expression dynamics of human fetal kidney development
- tissue: Kidney
- ontology: Kidney
- genotype: -
- stage: Fetal
- treatment condition: WT
- cell/nucleus: Cells
- pmid: 30789893
- subset name: wk09
- total genes: Not reported
- clustering: scran
- pseudotime: Monocle 2
- link: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE114530
Rows:18
| dataset id | cluster id | cluster name | cell type name | sample id | gene symbol | entrez geneid | species specific geneid |
avg log fc (?)
|
pct 1 | pct 2 | p value | padj |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 71 | 6 | IPC | Interstitial progenitor cell | wk09 | CLSPN | 63967 | 19715 | 0.97 | 1 | 0.14 | 1.0922975760575E-6 | 0.03 |
| 71 | 6 | IPC | Interstitial progenitor cell | wk09 | RUNX1T1 | 862 | 1535 | 0.9 | 0.75 | 0.03 | 3.5244367030441E-8 | 0.0011875237027237 |
| 71 | 6 | IPC | Interstitial progenitor cell | wk09 | RECQL4 | 9401 | 9949 | 0.85 | 0.75 | 0.02 | 6.4150633367639E-10 | 2.1614914406892E-5 |
| 71 | 6 | IPC | Interstitial progenitor cell | wk09 | ITPR2 | 3709 | 6181 | 0.8 | 0.75 | 0.04 | 9.6796924147755E-7 | 0.03 |
| 71 | 6 | IPC | Interstitial progenitor cell | wk09 | CPED1 | 79974 | 26159 | 0.73 | 1 | 0.1 | 1.2189488048131E-6 | 0.04 |
| 71 | 6 | IPC | Interstitial progenitor cell | wk09 | TATDN2 | 9797 | 28988 | 0.73 | 0.75 | 0.02 | 1.2063801646773E-9 | 4.0647773268638E-5 |
| 71 | 6 | IPC | Interstitial progenitor cell | wk09 | SMARCA2 | 6595 | 11098 | 0.73 | 0.75 | 0.03 | 2.7086315032298E-8 | 0.00091264629869825 |
| 71 | 6 | IPC | Interstitial progenitor cell | wk09 | BRCA1 | 672 | 1100 | 0.69 | 0.75 | 0.04 | 3.9802077836374E-7 | 0.01 |
| 71 | 6 | IPC | Interstitial progenitor cell | wk09 | CRYBG3 | 131544 | 34427 | 0.66 | 0.5 | 0 | 1.1918857582696E-10 | 4.0159398739135E-6 |
| 71 | 6 | IPC | Interstitial progenitor cell | wk09 | ENSG00000278276 | NULL | 0.64 | 0.5 | 0 | 1.1918857582696E-10 | 4.0159398739135E-6 | |
| 71 | 6 | IPC | Interstitial progenitor cell | wk09 | VSTM4 | 196740 | 26470 | 0.64 | 0.75 | 0.01 | 5.3126647340554E-12 | 1.7900492554926E-7 |
| 71 | 6 | IPC | Interstitial progenitor cell | wk09 | PMEPA1 | 56937 | 14107 | 0.6 | 0.75 | 0.04 | 6.2292300218944E-7 | 0.02 |
| 71 | 6 | IPC | Interstitial progenitor cell | wk09 | ENSG00000261353 | NULL | 0.52 | 0.5 | 0 | 1.1918857582696E-10 | 4.0159398739135E-6 | |
| 71 | 6 | IPC | Interstitial progenitor cell | wk09 | ENSG00000225889 | NULL | 0.51 | 0.5 | 0.01 | 2.4574791337355E-7 | 0.0082802301932083 | |
| 71 | 6 | IPC | Interstitial progenitor cell | wk09 | TCF19 | 6941 | 11629 | 0.48 | 0.75 | 0.04 | 1.2034084812237E-6 | 0.04 |
| 71 | 6 | IPC | Interstitial progenitor cell | wk09 | RFLNA | 144347 | 27051 | 0.38 | 0.5 | 0.01 | 3.4543815465207E-7 | 0.01 |
| 71 | 6 | IPC | Interstitial progenitor cell | wk09 | PHLDA2 | 7262 | 12385 | 0.37 | 0.5 | 0.01 | 1.741324512649E-7 | 0.0058672188129196 |
| 71 | 6 | IPC | Interstitial progenitor cell | wk09 | TH | 7054 | 11782 | 0.37 | 0.5 | 0.01 | 1.741324512649E-7 | 0.0058672188129196 |