Marker Genes
Dataset: Single-cell transcriptomics reveals gene expression dynamics of human fetal kidney development
- tissue: Kidney
- ontology: Kidney
- genotype: -
- stage: Fetal
- treatment condition: WT
- cell/nucleus: Cells
- pmid: 30789893
- subset name: wk09
- total genes: Not reported
- clustering: scran
- pseudotime: Monocle 2
- link: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE114530
Rows:78
dataset id | cluster id | cluster name | cell type name | sample id | gene symbol | entrez geneid | species specific geneid |
avg log fc (?)
|
pct 1 | pct 2 | p value | padj |
---|---|---|---|---|---|---|---|---|---|---|---|---|
71 | 3 | ErPrT | Early proximal tubule | wk09 | APOM | 55937 | 13916 | 1.77 | 1 | 0.09 | 2.17872083458934e-09 | 7.34098198006533e-05 |
71 | 3 | ErPrT | Early proximal tubule | wk09 | GATM | 2628 | 4175 | 1.72 | 1 | 0.06 | 1.6514803815532e-11 | 5.56449799760536e-07 |
71 | 3 | ErPrT | Early proximal tubule | wk09 | CLEC18A | 348174 | 30388 | 1.71 | 1 | 0.18 | 1.02614239033897e-06 | 0.03 |
71 | 3 | ErPrT | Early proximal tubule | wk09 | GLYATL1 | 92292 | 30519 | 1.61 | 1 | 0.06 | 1.86935080011632e-10 | 6.29859058591191e-06 |
71 | 3 | ErPrT | Early proximal tubule | wk09 | HNF4A | 3172 | 5024 | 1.58 | 0.8 | 0.04 | 1.00491407162593e-08 | 0.000338595747293641 |
71 | 3 | ErPrT | Early proximal tubule | wk09 | CDH6 | 1004 | 1765 | 1.46 | 1 | 0.14 | 1.95708034856918e-07 | 0.00659418652646899 |
71 | 3 | ErPrT | Early proximal tubule | wk09 | SMIM24 | 284422 | 37244 | 1.42 | 1 | 0.13 | 4.17182263782294e-07 | 0.01 |
71 | 3 | ErPrT | Early proximal tubule | wk09 | UGT3A1 | 133688 | 26625 | 1.42 | 0.8 | 0.09 | 1.22047898926574e-06 | 0.04 |
71 | 3 | ErPrT | Early proximal tubule | wk09 | PDZK1 | 5174 | 8821 | 1.41 | 1 | 0.07 | 2.62172114266368e-09 | 8.83362721809099e-05 |
71 | 3 | ErPrT | Early proximal tubule | wk09 | APOA1 | 335 | 600 | 1.4 | 0.6 | 0.02 | 5.09323830476893e-08 | 0.00171611571440884 |
71 | 3 | ErPrT | Early proximal tubule | wk09 | SLC13A1 | 6561 | 10916 | 1.38 | 1 | 0.01 | 5.99280084234273e-17 | 2.01921431581896e-12 |
71 | 3 | ErPrT | Early proximal tubule | wk09 | SLC27A2 | 11001 | 10996 | 1.36 | 1 | 0.12 | 1.3035984165757e-07 | 0.00439234450481018 |
71 | 3 | ErPrT | Early proximal tubule | wk09 | LRP2 | 4036 | 6694 | 1.32 | 0.8 | 0.01 | 4.69347590433886e-13 | 1.58141977120793e-08 |
71 | 3 | ErPrT | Early proximal tubule | wk09 | CA2 | 760 | 1373 | 1.31 | 1 | 0.13 | 2.03727225008777e-07 | 0.00686438511944574 |
71 | 3 | ErPrT | Early proximal tubule | wk09 | CLEC18C | 283971 | 28538 | 1.28 | 1 | 0.17 | 4.82528208983634e-07 | 0.01 |
71 | 3 | ErPrT | Early proximal tubule | wk09 | BHMT | 635 | 1047 | 1.28 | 0.8 | 0 | 2.09566721795182e-16 | 7.06114112416685e-12 |
71 | 3 | ErPrT | Early proximal tubule | wk09 | CUBN | 8029 | 2548 | 1.24 | 0.8 | 0.02 | 2.01753711910624e-11 | 6.79788956911658e-07 |
71 | 3 | ErPrT | Early proximal tubule | wk09 | AMN | 81693 | 14604 | 1.22 | 0.8 | 0.06 | 6.05739131231753e-08 | 0.00204097742877227 |
71 | 3 | ErPrT | Early proximal tubule | wk09 | LGALS2 | 3957 | 6562 | 1.16 | 0.8 | 0.06 | 1.07487939913693e-07 | 0.00362169864745197 |
71 | 3 | ErPrT | Early proximal tubule | wk09 | AFP | 174 | 317 | 1.07 | 0.8 | 0.06 | 4.99179383017666e-08 | 0.00168193501313972 |
71 | 3 | ErPrT | Early proximal tubule | wk09 | FMO1 | 2326 | 3769 | 1.03 | 0.8 | 0.02 | 2.01753711910624e-11 | 6.79788956911658e-07 |
71 | 3 | ErPrT | Early proximal tubule | wk09 | HNF4G | 3174 | 5026 | 1.02 | 1 | 0.03 | 3.93233140302352e-13 | 1.32495974293474e-08 |
71 | 3 | ErPrT | Early proximal tubule | wk09 | SLC3A1 | 6519 | 11025 | 1.02 | 0.8 | 0.07 | 4.31387043688122e-07 | 0.01 |
71 | 3 | ErPrT | Early proximal tubule | wk09 | HGD | 3081 | 4892 | 0.96 | 1 | 0.06 | 5.39836338421157e-10 | 1.81892455867625e-05 |
71 | 3 | ErPrT | Early proximal tubule | wk09 | GLYCTK | 132158 | 24247 | 0.93 | 1 | 0.09 | 8.99588544806801e-09 | 0.000303107364287203 |
71 | 3 | ErPrT | Early proximal tubule | wk09 | VIL1 | 7429 | 12690 | 0.93 | 1 | 0.02 | 9.05164894102221e-15 | 3.04986259418802e-10 |
71 | 3 | ErPrT | Early proximal tubule | wk09 | RAB29 | 8934 | 9789 | 0.92 | 0.8 | 0.02 | 3.55049260818698e-11 | 1.19630297940252e-06 |
71 | 3 | ErPrT | Early proximal tubule | wk09 | SLC16A4 | 9122 | 10925 | 0.9 | 1 | 0.09 | 1.50989460096132e-08 | 0.000508743886847907 |
71 | 3 | ErPrT | Early proximal tubule | wk09 | CDHR5 | 53841 | 7521 | 0.88 | 0.8 | 0.03 | 3.76689132247913e-10 | 1.26921636219612e-05 |
71 | 3 | ErPrT | Early proximal tubule | wk09 | ADH6 | 130 | 255 | 0.87 | 0.6 | 0.02 | 5.09323830476893e-08 | 0.00171611571440884 |
71 | 3 | ErPrT | Early proximal tubule | wk09 | LINC02532 | 100422737 | 53549 | 0.84 | 1 | 0.06 | 9.76832106435261e-11 | 3.29133809942297e-06 |
71 | 3 | ErPrT | Early proximal tubule | wk09 | PRODH2 | 58510 | 17325 | 0.83 | 0.6 | 0.03 | 1.32110566873218e-06 | 0.04 |
71 | 3 | ErPrT | Early proximal tubule | wk09 | ADAMTS9-AS1 | 101929335 | 40625 | 0.83 | 0.8 | 0.08 | 9.8004954403128e-07 | 0.03 |
71 | 3 | ErPrT | Early proximal tubule | wk09 | TMEM176B | 28959 | 29596 | 0.81 | 1 | 0.04 | 4.93192703176453e-11 | 1.66176349408274e-06 |
71 | 3 | ErPrT | Early proximal tubule | wk09 | FABP1 | 2168 | 3555 | 0.81 | 0.6 | 0.01 | 1.02272187007128e-09 | 3.44595906901819e-05 |
71 | 3 | ErPrT | Early proximal tubule | wk09 | GIPC2 | 54810 | 18177 | 0.8 | 0.6 | 0.03 | 7.00955807080706e-07 | 0.02 |
71 | 3 | ErPrT | Early proximal tubule | wk09 | UGT2A3 | 79799 | 28528 | 0.78 | 0.4 | 0 | 1.03308618696396e-08 | 0.000348088059835636 |
71 | 3 | ErPrT | Early proximal tubule | wk09 | DRAM1 | 55332 | 25645 | 0.77 | 1 | 0.02 | 1.22650835500355e-14 | 4.13259725134897e-10 |
71 | 3 | ErPrT | Early proximal tubule | wk09 | C1QTNF12 | 388581 | 32308 | 0.75 | 1 | 0.06 | 1.50728267782442e-10 | 5.0786382546616e-06 |
71 | 3 | ErPrT | Early proximal tubule | wk09 | TFEC | 22797 | 11754 | 0.75 | 0.4 | 0 | 1.03308618696396e-08 | 0.000348088059835636 |
71 | 3 | ErPrT | Early proximal tubule | wk09 | LINC02675 | 112267862 | 54169 | 0.71 | 0.6 | 0 | 1.58155764791843e-12 | 5.32890033889637e-08 |
71 | 3 | ErPrT | Early proximal tubule | wk09 | SCHIP1 | 29970 | 15678 | 0.7 | 0.6 | 0.03 | 1.07130154393252e-06 | 0.03 |
71 | 3 | ErPrT | Early proximal tubule | wk09 | PANCR | 110231149 | 52282 | 0.7 | 0.6 | 0 | 1.58155764791843e-12 | 5.32890033889637e-08 |
71 | 3 | ErPrT | Early proximal tubule | wk09 | HAO2 | 51179 | 4810 | 0.69 | 0.6 | 0 | 1.58155764791843e-12 | 5.32890033889637e-08 |
71 | 3 | ErPrT | Early proximal tubule | wk09 | ACY3 | 91703 | 24104 | 0.69 | 0.6 | 0 | 1.58155764791843e-12 | 5.32890033889637e-08 |
71 | 3 | ErPrT | Early proximal tubule | wk09 | AGXT2 | 64902 | 14412 | 0.67 | 0.6 | 0 | 1.58155764791843e-12 | 5.32890033889637e-08 |
71 | 3 | ErPrT | Early proximal tubule | wk09 | SLC34A1 | 6569 | 11019 | 0.64 | 0.8 | 0.01 | 6.54209626429019e-13 | 2.20429391528994e-08 |
71 | 3 | ErPrT | Early proximal tubule | wk09 | SLC5A8 | 160728 | 19119 | 0.63 | 0.8 | 0.03 | 2.61523104237717e-09 | 8.81175947418564e-05 |
71 | 3 | ErPrT | Early proximal tubule | wk09 | GLTPD2 | 388323 | 33756 | 0.63 | 0.8 | 0 | 2.09566721795182e-16 | 7.06114112416685e-12 |
71 | 3 | ErPrT | Early proximal tubule | wk09 | SMIM32 | 389332 | 53640 | 0.62 | 0.6 | 0.01 | 1.02272187007128e-09 | 3.44595906901819e-05 |
71 | 3 | ErPrT | Early proximal tubule | wk09 | CLRN3 | 119467 | 20795 | 0.62 | 0.6 | 0 | 1.58155764791843e-12 | 5.32890033889637e-08 |
71 | 3 | ErPrT | Early proximal tubule | wk09 | ALDH8A1 | 64577 | 15471 | 0.61 | 0.8 | 0.02 | 2.01753711910624e-11 | 6.79788956911658e-07 |
71 | 3 | ErPrT | Early proximal tubule | wk09 | GLYAT | 10249 | 13734 | 0.59 | 0.6 | 0 | 1.58155764791843e-12 | 5.32890033889637e-08 |
71 | 3 | ErPrT | Early proximal tubule | wk09 | ADAMTS16 | 170690 | 17108 | 0.58 | 0.8 | 0.07 | 8.52955220154899e-07 | 0.02 |
71 | 3 | ErPrT | Early proximal tubule | wk09 | SH2D3A | 10045 | 16885 | 0.56 | 0.6 | 0.02 | 8.43343552995379e-08 | 0.00284156176746263 |
71 | 3 | ErPrT | Early proximal tubule | wk09 | PGPEP1 | 54858 | 13568 | 0.55 | 0.6 | 0.02 | 1.08197390060159e-07 | 0.00364560286068699 |
71 | 3 | ErPrT | Early proximal tubule | wk09 | ERICH5 | 203111 | 26823 | 0.55 | 0.6 | 0.02 | 1.08197390060159e-07 | 0.00364560286068699 |
71 | 3 | ErPrT | Early proximal tubule | wk09 | F2RL1 | 2150 | 3538 | 0.49 | 0.6 | 0.03 | 1.32110566873218e-06 | 0.04 |
71 | 3 | ErPrT | Early proximal tubule | wk09 | SERPINA1 | 5265 | 8941 | 0.49 | 0.4 | 0 | 1.03308618696396e-08 | 0.000348088059835636 |
71 | 3 | ErPrT | Early proximal tubule | wk09 | AKR1C3 | 8644 | 386 | 0.48 | 0.6 | 0.03 | 8.67287078039649e-07 | 0.02 |
71 | 3 | ErPrT | Early proximal tubule | wk09 | PAH | 5053 | 8582 | 0.46 | 0.4 | 0 | 1.03308618696396e-08 | 0.000348088059835636 |
71 | 3 | ErPrT | Early proximal tubule | wk09 | PALM3 | 342979 | 33274 | 0.46 | 0.6 | 0 | 1.58155764791843e-12 | 5.32890033889637e-08 |
71 | 3 | ErPrT | Early proximal tubule | wk09 | CAV2 | 858 | 1528 | 0.42 | 0.6 | 0.02 | 2.25780276797444e-07 | 0.00760744064641307 |
71 | 3 | ErPrT | Early proximal tubule | wk09 | PDZD3 | 79849 | 19891 | 0.41 | 0.4 | 0 | 1.03308618696396e-08 | 0.000348088059835636 |
71 | 3 | ErPrT | Early proximal tubule | wk09 | MEIOC | 284071 | 26670 | 0.41 | 0.4 | 0 | 1.03308618696396e-08 | 0.000348088059835636 |
71 | 3 | ErPrT | Early proximal tubule | wk09 | GPT | 2875 | 4552 | 0.4 | 0.4 | 0 | 1.03308618696396e-08 | 0.000348088059835636 |
71 | 3 | ErPrT | Early proximal tubule | wk09 | NUDT8 | 254552 | 8055 | 0.36 | 0.4 | 0 | 1.03308618696396e-08 | 0.000348088059835636 |
71 | 3 | ErPrT | Early proximal tubule | wk09 | AXDND1 | 126859 | 26564 | 0.36 | 0.4 | 0 | 1.03308618696396e-08 | 0.000348088059835636 |
71 | 3 | ErPrT | Early proximal tubule | wk09 | GPHA2 | 170589 | 18054 | 0.36 | 0.4 | 0 | 1.03308618696396e-08 | 0.000348088059835636 |
71 | 3 | ErPrT | Early proximal tubule | wk09 | CCDC88B | 283234 | 26757 | 0.36 | 0.4 | 0 | 1.03308618696396e-08 | 0.000348088059835636 |
71 | 3 | ErPrT | Early proximal tubule | wk09 | AQP6 | 363 | 639 | 0.36 | 0.4 | 0 | 1.03308618696396e-08 | 0.000348088059835636 |
71 | 3 | ErPrT | Early proximal tubule | wk09 | LOC101927322 | 101927322 | NULL | 0.3 | 0.4 | 0 | 1.03308618696396e-08 | 0.000348088059835636 |
71 | 3 | ErPrT | Early proximal tubule | wk09 | ENSG00000260578 | NULL | 0.3 | 0.4 | 0 | 1.03308618696396e-08 | 0.000348088059835636 | |
71 | 3 | ErPrT | Early proximal tubule | wk09 | SLC7A9 | 11136 | 11067 | 0.3 | 0.4 | 0 | 1.03308618696396e-08 | 0.000348088059835636 |
71 | 3 | ErPrT | Early proximal tubule | wk09 | COBL | 23242 | 22199 | 0.3 | 0.4 | 0 | 1.03308618696396e-08 | 0.000348088059835636 |
71 | 3 | ErPrT | Early proximal tubule | wk09 | PTK2B | 2185 | 9612 | 0.3 | 0.4 | 0 | 1.03308618696396e-08 | 0.000348088059835636 |
71 | 3 | ErPrT | Early proximal tubule | wk09 | DOCK8-AS1 | 157983 | 26436 | 0.3 | 0.4 | 0 | 1.03308618696396e-08 | 0.000348088059835636 |
71 | 3 | ErPrT | Early proximal tubule | wk09 | TENM1 | 10178 | 8117 | 0.3 | 0.4 | 0 | 1.03308618696396e-08 | 0.000348088059835636 |