Marker Genes
Dataset: Single-cell transcriptomics reveals gene expression dynamics of human fetal kidney development
- tissue: Kidney
- ontology: Kidney
- genotype: -
- stage: Fetal
- treatment condition: WT
- cell/nucleus: Cells
- pmid: 30789893
- subset name: wk09
- total genes: Not reported
- clustering: scran
- pseudotime: Monocle 2
- link: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE114530
Rows:78
| dataset id | cluster id | cluster name | cell type name | sample id | gene symbol | entrez geneid | species specific geneid |
avg log fc (?)
|
pct 1 | pct 2 | p value | padj |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 71 | 3 | ErPrT | Early proximal tubule | wk09 | APOM | 55937 | 13916 | 1.77 | 1 | 0.09 | 2.1787208345893E-9 | 7.3409819800653E-5 |
| 71 | 3 | ErPrT | Early proximal tubule | wk09 | GATM | 2628 | 4175 | 1.72 | 1 | 0.06 | 1.6514803815532E-11 | 5.5644979976054E-7 |
| 71 | 3 | ErPrT | Early proximal tubule | wk09 | CLEC18A | 348174 | 30388 | 1.71 | 1 | 0.18 | 1.026142390339E-6 | 0.03 |
| 71 | 3 | ErPrT | Early proximal tubule | wk09 | GLYATL1 | 92292 | 30519 | 1.61 | 1 | 0.06 | 1.8693508001163E-10 | 6.2985905859119E-6 |
| 71 | 3 | ErPrT | Early proximal tubule | wk09 | HNF4A | 3172 | 5024 | 1.58 | 0.8 | 0.04 | 1.0049140716259E-8 | 0.00033859574729364 |
| 71 | 3 | ErPrT | Early proximal tubule | wk09 | CDH6 | 1004 | 1765 | 1.46 | 1 | 0.14 | 1.9570803485692E-7 | 0.006594186526469 |
| 71 | 3 | ErPrT | Early proximal tubule | wk09 | SMIM24 | 284422 | 37244 | 1.42 | 1 | 0.13 | 4.1718226378229E-7 | 0.01 |
| 71 | 3 | ErPrT | Early proximal tubule | wk09 | UGT3A1 | 133688 | 26625 | 1.42 | 0.8 | 0.09 | 1.2204789892657E-6 | 0.04 |
| 71 | 3 | ErPrT | Early proximal tubule | wk09 | PDZK1 | 5174 | 8821 | 1.41 | 1 | 0.07 | 2.6217211426637E-9 | 8.833627218091E-5 |
| 71 | 3 | ErPrT | Early proximal tubule | wk09 | APOA1 | 335 | 600 | 1.4 | 0.6 | 0.02 | 5.0932383047689E-8 | 0.0017161157144088 |
| 71 | 3 | ErPrT | Early proximal tubule | wk09 | SLC13A1 | 6561 | 10916 | 1.38 | 1 | 0.01 | 5.9928008423427E-17 | 2.019214315819E-12 |
| 71 | 3 | ErPrT | Early proximal tubule | wk09 | SLC27A2 | 11001 | 10996 | 1.36 | 1 | 0.12 | 1.3035984165757E-7 | 0.0043923445048102 |
| 71 | 3 | ErPrT | Early proximal tubule | wk09 | LRP2 | 4036 | 6694 | 1.32 | 0.8 | 0.01 | 4.6934759043389E-13 | 1.5814197712079E-8 |
| 71 | 3 | ErPrT | Early proximal tubule | wk09 | CA2 | 760 | 1373 | 1.31 | 1 | 0.13 | 2.0372722500878E-7 | 0.0068643851194457 |
| 71 | 3 | ErPrT | Early proximal tubule | wk09 | CLEC18C | 283971 | 28538 | 1.28 | 1 | 0.17 | 4.8252820898363E-7 | 0.01 |
| 71 | 3 | ErPrT | Early proximal tubule | wk09 | BHMT | 635 | 1047 | 1.28 | 0.8 | 0 | 2.0956672179518E-16 | 7.0611411241669E-12 |
| 71 | 3 | ErPrT | Early proximal tubule | wk09 | CUBN | 8029 | 2548 | 1.24 | 0.8 | 0.02 | 2.0175371191062E-11 | 6.7978895691166E-7 |
| 71 | 3 | ErPrT | Early proximal tubule | wk09 | AMN | 81693 | 14604 | 1.22 | 0.8 | 0.06 | 6.0573913123175E-8 | 0.0020409774287723 |
| 71 | 3 | ErPrT | Early proximal tubule | wk09 | LGALS2 | 3957 | 6562 | 1.16 | 0.8 | 0.06 | 1.0748793991369E-7 | 0.003621698647452 |
| 71 | 3 | ErPrT | Early proximal tubule | wk09 | AFP | 174 | 317 | 1.07 | 0.8 | 0.06 | 4.9917938301767E-8 | 0.0016819350131397 |
| 71 | 3 | ErPrT | Early proximal tubule | wk09 | FMO1 | 2326 | 3769 | 1.03 | 0.8 | 0.02 | 2.0175371191062E-11 | 6.7978895691166E-7 |
| 71 | 3 | ErPrT | Early proximal tubule | wk09 | HNF4G | 3174 | 5026 | 1.02 | 1 | 0.03 | 3.9323314030235E-13 | 1.3249597429347E-8 |
| 71 | 3 | ErPrT | Early proximal tubule | wk09 | SLC3A1 | 6519 | 11025 | 1.02 | 0.8 | 0.07 | 4.3138704368812E-7 | 0.01 |
| 71 | 3 | ErPrT | Early proximal tubule | wk09 | HGD | 3081 | 4892 | 0.96 | 1 | 0.06 | 5.3983633842116E-10 | 1.8189245586762E-5 |
| 71 | 3 | ErPrT | Early proximal tubule | wk09 | GLYCTK | 132158 | 24247 | 0.93 | 1 | 0.09 | 8.995885448068E-9 | 0.0003031073642872 |
| 71 | 3 | ErPrT | Early proximal tubule | wk09 | VIL1 | 7429 | 12690 | 0.93 | 1 | 0.02 | 9.0516489410222E-15 | 3.049862594188E-10 |
| 71 | 3 | ErPrT | Early proximal tubule | wk09 | RAB29 | 8934 | 9789 | 0.92 | 0.8 | 0.02 | 3.550492608187E-11 | 1.1963029794025E-6 |
| 71 | 3 | ErPrT | Early proximal tubule | wk09 | SLC16A4 | 9122 | 10925 | 0.9 | 1 | 0.09 | 1.5098946009613E-8 | 0.00050874388684791 |
| 71 | 3 | ErPrT | Early proximal tubule | wk09 | CDHR5 | 53841 | 7521 | 0.88 | 0.8 | 0.03 | 3.7668913224791E-10 | 1.2692163621961E-5 |
| 71 | 3 | ErPrT | Early proximal tubule | wk09 | ADH6 | 130 | 255 | 0.87 | 0.6 | 0.02 | 5.0932383047689E-8 | 0.0017161157144088 |
| 71 | 3 | ErPrT | Early proximal tubule | wk09 | LINC02532 | 100422737 | 53549 | 0.84 | 1 | 0.06 | 9.7683210643526E-11 | 3.291338099423E-6 |
| 71 | 3 | ErPrT | Early proximal tubule | wk09 | PRODH2 | 58510 | 17325 | 0.83 | 0.6 | 0.03 | 1.3211056687322E-6 | 0.04 |
| 71 | 3 | ErPrT | Early proximal tubule | wk09 | ADAMTS9-AS1 | 101929335 | 40625 | 0.83 | 0.8 | 0.08 | 9.8004954403128E-7 | 0.03 |
| 71 | 3 | ErPrT | Early proximal tubule | wk09 | TMEM176B | 28959 | 29596 | 0.81 | 1 | 0.04 | 4.9319270317645E-11 | 1.6617634940827E-6 |
| 71 | 3 | ErPrT | Early proximal tubule | wk09 | FABP1 | 2168 | 3555 | 0.81 | 0.6 | 0.01 | 1.0227218700713E-9 | 3.4459590690182E-5 |
| 71 | 3 | ErPrT | Early proximal tubule | wk09 | GIPC2 | 54810 | 18177 | 0.8 | 0.6 | 0.03 | 7.0095580708071E-7 | 0.02 |
| 71 | 3 | ErPrT | Early proximal tubule | wk09 | UGT2A3 | 79799 | 28528 | 0.78 | 0.4 | 0 | 1.033086186964E-8 | 0.00034808805983564 |
| 71 | 3 | ErPrT | Early proximal tubule | wk09 | DRAM1 | 55332 | 25645 | 0.77 | 1 | 0.02 | 1.2265083550035E-14 | 4.132597251349E-10 |
| 71 | 3 | ErPrT | Early proximal tubule | wk09 | C1QTNF12 | 388581 | 32308 | 0.75 | 1 | 0.06 | 1.5072826778244E-10 | 5.0786382546616E-6 |
| 71 | 3 | ErPrT | Early proximal tubule | wk09 | TFEC | 22797 | 11754 | 0.75 | 0.4 | 0 | 1.033086186964E-8 | 0.00034808805983564 |
| 71 | 3 | ErPrT | Early proximal tubule | wk09 | LINC02675 | 112267862 | 54169 | 0.71 | 0.6 | 0 | 1.5815576479184E-12 | 5.3289003388964E-8 |
| 71 | 3 | ErPrT | Early proximal tubule | wk09 | SCHIP1 | 29970 | 15678 | 0.7 | 0.6 | 0.03 | 1.0713015439325E-6 | 0.03 |
| 71 | 3 | ErPrT | Early proximal tubule | wk09 | PANCR | 110231149 | 52282 | 0.7 | 0.6 | 0 | 1.5815576479184E-12 | 5.3289003388964E-8 |
| 71 | 3 | ErPrT | Early proximal tubule | wk09 | HAO2 | 51179 | 4810 | 0.69 | 0.6 | 0 | 1.5815576479184E-12 | 5.3289003388964E-8 |
| 71 | 3 | ErPrT | Early proximal tubule | wk09 | ACY3 | 91703 | 24104 | 0.69 | 0.6 | 0 | 1.5815576479184E-12 | 5.3289003388964E-8 |
| 71 | 3 | ErPrT | Early proximal tubule | wk09 | AGXT2 | 64902 | 14412 | 0.67 | 0.6 | 0 | 1.5815576479184E-12 | 5.3289003388964E-8 |
| 71 | 3 | ErPrT | Early proximal tubule | wk09 | SLC34A1 | 6569 | 11019 | 0.64 | 0.8 | 0.01 | 6.5420962642902E-13 | 2.2042939152899E-8 |
| 71 | 3 | ErPrT | Early proximal tubule | wk09 | SLC5A8 | 160728 | 19119 | 0.63 | 0.8 | 0.03 | 2.6152310423772E-9 | 8.8117594741856E-5 |
| 71 | 3 | ErPrT | Early proximal tubule | wk09 | GLTPD2 | 388323 | 33756 | 0.63 | 0.8 | 0 | 2.0956672179518E-16 | 7.0611411241669E-12 |
| 71 | 3 | ErPrT | Early proximal tubule | wk09 | SMIM32 | 389332 | 53640 | 0.62 | 0.6 | 0.01 | 1.0227218700713E-9 | 3.4459590690182E-5 |
| 71 | 3 | ErPrT | Early proximal tubule | wk09 | CLRN3 | 119467 | 20795 | 0.62 | 0.6 | 0 | 1.5815576479184E-12 | 5.3289003388964E-8 |
| 71 | 3 | ErPrT | Early proximal tubule | wk09 | ALDH8A1 | 64577 | 15471 | 0.61 | 0.8 | 0.02 | 2.0175371191062E-11 | 6.7978895691166E-7 |
| 71 | 3 | ErPrT | Early proximal tubule | wk09 | GLYAT | 10249 | 13734 | 0.59 | 0.6 | 0 | 1.5815576479184E-12 | 5.3289003388964E-8 |
| 71 | 3 | ErPrT | Early proximal tubule | wk09 | ADAMTS16 | 170690 | 17108 | 0.58 | 0.8 | 0.07 | 8.529552201549E-7 | 0.02 |
| 71 | 3 | ErPrT | Early proximal tubule | wk09 | SH2D3A | 10045 | 16885 | 0.56 | 0.6 | 0.02 | 8.4334355299538E-8 | 0.0028415617674626 |
| 71 | 3 | ErPrT | Early proximal tubule | wk09 | PGPEP1 | 54858 | 13568 | 0.55 | 0.6 | 0.02 | 1.0819739006016E-7 | 0.003645602860687 |
| 71 | 3 | ErPrT | Early proximal tubule | wk09 | ERICH5 | 203111 | 26823 | 0.55 | 0.6 | 0.02 | 1.0819739006016E-7 | 0.003645602860687 |
| 71 | 3 | ErPrT | Early proximal tubule | wk09 | F2RL1 | 2150 | 3538 | 0.49 | 0.6 | 0.03 | 1.3211056687322E-6 | 0.04 |
| 71 | 3 | ErPrT | Early proximal tubule | wk09 | SERPINA1 | 5265 | 8941 | 0.49 | 0.4 | 0 | 1.033086186964E-8 | 0.00034808805983564 |
| 71 | 3 | ErPrT | Early proximal tubule | wk09 | AKR1C3 | 8644 | 386 | 0.48 | 0.6 | 0.03 | 8.6728707803965E-7 | 0.02 |
| 71 | 3 | ErPrT | Early proximal tubule | wk09 | PAH | 5053 | 8582 | 0.46 | 0.4 | 0 | 1.033086186964E-8 | 0.00034808805983564 |
| 71 | 3 | ErPrT | Early proximal tubule | wk09 | PALM3 | 342979 | 33274 | 0.46 | 0.6 | 0 | 1.5815576479184E-12 | 5.3289003388964E-8 |
| 71 | 3 | ErPrT | Early proximal tubule | wk09 | CAV2 | 858 | 1528 | 0.42 | 0.6 | 0.02 | 2.2578027679744E-7 | 0.0076074406464131 |
| 71 | 3 | ErPrT | Early proximal tubule | wk09 | PDZD3 | 79849 | 19891 | 0.41 | 0.4 | 0 | 1.033086186964E-8 | 0.00034808805983564 |
| 71 | 3 | ErPrT | Early proximal tubule | wk09 | MEIOC | 284071 | 26670 | 0.41 | 0.4 | 0 | 1.033086186964E-8 | 0.00034808805983564 |
| 71 | 3 | ErPrT | Early proximal tubule | wk09 | GPT | 2875 | 4552 | 0.4 | 0.4 | 0 | 1.033086186964E-8 | 0.00034808805983564 |
| 71 | 3 | ErPrT | Early proximal tubule | wk09 | NUDT8 | 254552 | 8055 | 0.36 | 0.4 | 0 | 1.033086186964E-8 | 0.00034808805983564 |
| 71 | 3 | ErPrT | Early proximal tubule | wk09 | AXDND1 | 126859 | 26564 | 0.36 | 0.4 | 0 | 1.033086186964E-8 | 0.00034808805983564 |
| 71 | 3 | ErPrT | Early proximal tubule | wk09 | GPHA2 | 170589 | 18054 | 0.36 | 0.4 | 0 | 1.033086186964E-8 | 0.00034808805983564 |
| 71 | 3 | ErPrT | Early proximal tubule | wk09 | CCDC88B | 283234 | 26757 | 0.36 | 0.4 | 0 | 1.033086186964E-8 | 0.00034808805983564 |
| 71 | 3 | ErPrT | Early proximal tubule | wk09 | AQP6 | 363 | 639 | 0.36 | 0.4 | 0 | 1.033086186964E-8 | 0.00034808805983564 |
| 71 | 3 | ErPrT | Early proximal tubule | wk09 | LOC101927322 | 101927322 | NULL | 0.3 | 0.4 | 0 | 1.033086186964E-8 | 0.00034808805983564 |
| 71 | 3 | ErPrT | Early proximal tubule | wk09 | ENSG00000260578 | NULL | 0.3 | 0.4 | 0 | 1.033086186964E-8 | 0.00034808805983564 | |
| 71 | 3 | ErPrT | Early proximal tubule | wk09 | SLC7A9 | 11136 | 11067 | 0.3 | 0.4 | 0 | 1.033086186964E-8 | 0.00034808805983564 |
| 71 | 3 | ErPrT | Early proximal tubule | wk09 | COBL | 23242 | 22199 | 0.3 | 0.4 | 0 | 1.033086186964E-8 | 0.00034808805983564 |
| 71 | 3 | ErPrT | Early proximal tubule | wk09 | PTK2B | 2185 | 9612 | 0.3 | 0.4 | 0 | 1.033086186964E-8 | 0.00034808805983564 |
| 71 | 3 | ErPrT | Early proximal tubule | wk09 | DOCK8-AS1 | 157983 | 26436 | 0.3 | 0.4 | 0 | 1.033086186964E-8 | 0.00034808805983564 |
| 71 | 3 | ErPrT | Early proximal tubule | wk09 | TENM1 | 10178 | 8117 | 0.3 | 0.4 | 0 | 1.033086186964E-8 | 0.00034808805983564 |