Marker Genes
Dataset: Single-cell transcriptomics reveals gene expression dynamics of human fetal kidney development
- tissue: Kidney
- ontology: Kidney
- genotype: -
- stage: Fetal
- treatment condition: WT
- cell/nucleus: Cells
- pmid: 30789893
- subset name: wk09
- total genes: Not reported
- clustering: scran
- pseudotime: Monocle 2
- link: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE114530
Rows:67
| dataset id | cluster id | cluster name | cell type name | sample id | gene symbol | entrez geneid | species specific geneid |
avg log fc (?)
|
pct 1 | pct 2 | p value | padj |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 71 | 15 | PTA | Pretubular aggregate | wk09 | UBE2C | 11065 | 15937 | 1.87 | 0.93 | 0.15 | 1.2897010085466E-10 | 4.345518578197E-6 |
| 71 | 15 | PTA | Pretubular aggregate | wk09 | HMGB2 | 3148 | 5000 | 1.51 | 1 | 0.65 | 8.2310347784624E-8 | 0.0027733648582551 |
| 71 | 15 | PTA | Pretubular aggregate | wk09 | TOP2A | 7153 | 11989 | 1.48 | 0.8 | 0.05 | 7.7264190468328E-12 | 2.6033396336398E-7 |
| 71 | 15 | PTA | Pretubular aggregate | wk09 | TUBA1B | 10376 | 18809 | 1.38 | 1 | 0.91 | 8.4259027900803E-9 | 0.00028390236860897 |
| 71 | 15 | PTA | Pretubular aggregate | wk09 | CKS1B | 1163 | 19083 | 1.33 | 0.93 | 0.52 | 1.4520208109906E-7 | 0.0048924389205517 |
| 71 | 15 | PTA | Pretubular aggregate | wk09 | NUSAP1 | 51203 | 18538 | 1.23 | 0.8 | 0.19 | 2.168319648935E-7 | 0.0073059362251215 |
| 71 | 15 | PTA | Pretubular aggregate | wk09 | CDK1 | 983 | 1722 | 1.16 | 0.73 | 0.08 | 5.3287275302071E-10 | 1.795461454028E-5 |
| 71 | 15 | PTA | Pretubular aggregate | wk09 | CENPF | 1063 | 1857 | 1.09 | 0.8 | 0.11 | 2.1838653366977E-9 | 7.3583158654693E-5 |
| 71 | 15 | PTA | Pretubular aggregate | wk09 | PCLAF | 9768 | 28961 | 1.08 | 0.93 | 0.31 | 1.0553616189444E-6 | 0.03 |
| 71 | 15 | PTA | Pretubular aggregate | wk09 | BIRC5 | 332 | 593 | 1.05 | 1 | 0.23 | 1.9928876265293E-9 | 6.7148355688277E-5 |
| 71 | 15 | PTA | Pretubular aggregate | wk09 | MAD2L1 | 4085 | 6763 | 1.03 | 0.93 | 0.23 | 1.5556953913528E-8 | 0.0005241760051624 |
| 71 | 15 | PTA | Pretubular aggregate | wk09 | H2AFZ | 3015 | 4741 | 1.02 | 1 | 0.95 | 2.1240759385609E-8 | 0.0007156861467387 |
| 71 | 15 | PTA | Pretubular aggregate | wk09 | HMGB1 | 3146 | 4983 | 1.01 | 1 | 1 | 4.0396275303622E-8 | 0.0013611121000802 |
| 71 | 15 | PTA | Pretubular aggregate | wk09 | UBE2T | 29089 | 25009 | 0.96 | 0.73 | 0.11 | 1.6006550836835E-8 | 0.00053932472389632 |
| 71 | 15 | PTA | Pretubular aggregate | wk09 | AURKB | 9212 | 11390 | 0.9 | 0.66 | 0.11 | 1.2404736116707E-6 | 0.04 |
| 71 | 15 | PTA | Pretubular aggregate | wk09 | RRM2 | 6241 | 10452 | 0.88 | 0.73 | 0.08 | 1.3997666126613E-8 | 0.0004716373624701 |
| 71 | 15 | PTA | Pretubular aggregate | wk09 | CDCA3 | 83461 | 14624 | 0.82 | 0.53 | 0.02 | 1.8008087083688E-8 | 0.00060676448619779 |
| 71 | 15 | PTA | Pretubular aggregate | wk09 | PBK | 55872 | 18282 | 0.79 | 0.66 | 0.09 | 6.2438889203733E-7 | 0.02 |
| 71 | 15 | PTA | Pretubular aggregate | wk09 | MKI67 | 4288 | 7107 | 0.76 | 0.73 | 0.06 | 5.5740714182559E-9 | 0.00018781276236671 |
| 71 | 15 | PTA | Pretubular aggregate | wk09 | STMN1 | 3925 | 6510 | 0.74 | 1 | 0.98 | 5.55918103874E-7 | 0.01 |
| 71 | 15 | PTA | Pretubular aggregate | wk09 | ZWINT | 11130 | 13195 | 0.73 | 0.86 | 0.2 | 7.8405881658993E-8 | 0.0026418077766181 |
| 71 | 15 | PTA | Pretubular aggregate | wk09 | PRC1 | 9055 | 9341 | 0.72 | 0.73 | 0.16 | 1.4678204415559E-6 | 0.04 |
| 71 | 15 | PTA | Pretubular aggregate | wk09 | PIMREG | 54478 | 25483 | 0.72 | 0.66 | 0.04 | 1.6080423764037E-9 | 5.4181379830547E-5 |
| 71 | 15 | PTA | Pretubular aggregate | wk09 | NUF2 | 83540 | 14621 | 0.71 | 0.66 | 0.08 | 2.2133693825006E-7 | 0.0074577267973975 |
| 71 | 15 | PTA | Pretubular aggregate | wk09 | CCNA2 | 890 | 1578 | 0.71 | 0.66 | 0.11 | 1.4550232046832E-6 | 0.04 |
| 71 | 15 | PTA | Pretubular aggregate | wk09 | RNASEH2A | 10535 | 18518 | 0.69 | 0.86 | 0.16 | 3.6494499159587E-8 | 0.0012296456546831 |
| 71 | 15 | PTA | Pretubular aggregate | wk09 | CENPU | 79682 | 21348 | 0.68 | 0.66 | 0.08 | 8.1669995907619E-8 | 0.0027517888421113 |
| 71 | 15 | PTA | Pretubular aggregate | wk09 | CDCA4 | 55038 | 14625 | 0.67 | 0.93 | 0.25 | 2.3846693420425E-7 | 0.0080349048810781 |
| 71 | 15 | PTA | Pretubular aggregate | wk09 | HIST1H2BH | 8345 | 4755 | 0.66 | 0.6 | 0.05 | 1.4161224023158E-7 | 0.0047714828223628 |
| 71 | 15 | PTA | Pretubular aggregate | wk09 | TACC3 | 10460 | 11524 | 0.65 | 0.66 | 0.09 | 5.276307405004E-7 | 0.01 |
| 71 | 15 | PTA | Pretubular aggregate | wk09 | HJURP | 55355 | 25444 | 0.63 | 0.6 | 0.02 | 1.9302390114646E-9 | 6.5037473252287E-5 |
| 71 | 15 | PTA | Pretubular aggregate | wk09 | KIF23 | 9493 | 6392 | 0.63 | 0.66 | 0.08 | 1.5460860493767E-7 | 0.0052093823347698 |
| 71 | 15 | PTA | Pretubular aggregate | wk09 | CDCA5 | 113130 | 14626 | 0.62 | 0.6 | 0.06 | 4.4242241475905E-7 | 0.01 |
| 71 | 15 | PTA | Pretubular aggregate | wk09 | NCAPG | 64151 | 24304 | 0.61 | 0.73 | 0.06 | 1.6535781192114E-9 | 5.571566114871E-5 |
| 71 | 15 | PTA | Pretubular aggregate | wk09 | RACGAP1 | 29127 | 9804 | 0.58 | 0.66 | 0.06 | 4.251178816723E-8 | 0.0014323921905067 |
| 71 | 15 | PTA | Pretubular aggregate | wk09 | GTSE1 | 51512 | 13698 | 0.58 | 0.6 | 0.06 | 5.3142022814921E-7 | 0.01 |
| 71 | 15 | PTA | Pretubular aggregate | wk09 | MIS18BP1 | 55320 | 20190 | 0.57 | 0.8 | 0.13 | 8.8229656837586E-8 | 0.0029728100574856 |
| 71 | 15 | PTA | Pretubular aggregate | wk09 | DEPDC1 | 55635 | 22949 | 0.56 | 0.6 | 0.04 | 1.4271197989761E-8 | 0.00048085374506702 |
| 71 | 15 | PTA | Pretubular aggregate | wk09 | SMC2 | 10592 | 14011 | 0.56 | 0.86 | 0.16 | 1.0141924824435E-7 | 0.0034172201503452 |
| 71 | 15 | PTA | Pretubular aggregate | wk09 | CDC45 | 8318 | 1739 | 0.55 | 0.73 | 0.04 | 1.7182136280514E-10 | 5.7893489983565E-6 |
| 71 | 15 | PTA | Pretubular aggregate | wk09 | RFC3 | 5983 | 9971 | 0.55 | 0.66 | 0.11 | 6.489784743051E-7 | 0.02 |
| 71 | 15 | PTA | Pretubular aggregate | wk09 | NEK2 | 4751 | 7745 | 0.52 | 0.46 | 0.02 | 6.9046765370853E-7 | 0.02 |
| 71 | 15 | PTA | Pretubular aggregate | wk09 | SPC25 | 57405 | 24031 | 0.52 | 0.66 | 0.05 | 2.0024097705696E-8 | 0.00067469194809572 |
| 71 | 15 | PTA | Pretubular aggregate | wk09 | KIFC1 | 3833 | 6389 | 0.52 | 0.66 | 0.02 | 1.5423708117211E-10 | 5.196864213013E-6 |
| 71 | 15 | PTA | Pretubular aggregate | wk09 | BUB1 | 699 | 1148 | 0.51 | 0.53 | 0.04 | 3.420717173483E-7 | 0.01 |
| 71 | 15 | PTA | Pretubular aggregate | wk09 | VRK1 | 7443 | 12718 | 0.5 | 0.73 | 0.12 | 5.9570014032164E-7 | 0.02 |
| 71 | 15 | PTA | Pretubular aggregate | wk09 | SPAG5 | 10615 | 13452 | 0.5 | 0.6 | 0.06 | 2.1001215483146E-7 | 0.0070761495448912 |
| 71 | 15 | PTA | Pretubular aggregate | wk09 | DLGAP5 | 9787 | 16864 | 0.49 | 0.53 | 0.04 | 3.420717173483E-7 | 0.01 |
| 71 | 15 | PTA | Pretubular aggregate | wk09 | TTK | 7272 | 12401 | 0.48 | 0.46 | 0 | 2.0831797671905E-9 | 7.0190659075717E-5 |
| 71 | 15 | PTA | Pretubular aggregate | wk09 | C21orf58 | 54058 | 1300 | 0.47 | 0.66 | 0.04 | 2.8061848652868E-9 | 9.4551592850974E-5 |
| 71 | 15 | PTA | Pretubular aggregate | wk09 | OIP5 | 11339 | 20300 | 0.45 | 0.53 | 0.05 | 9.5062686883853E-7 | 0.03 |
| 71 | 15 | PTA | Pretubular aggregate | wk09 | UBR7 | 55148 | 20344 | 0.43 | 0.66 | 0.05 | 7.9331958408509E-9 | 0.00026730110066163 |
| 71 | 15 | PTA | Pretubular aggregate | wk09 | SKA3 | 221150 | 20262 | 0.43 | 0.53 | 0.04 | 1.6509148061963E-7 | 0.0055625923479978 |
| 71 | 15 | PTA | Pretubular aggregate | wk09 | CENPP | 401541 | 32933 | 0.4 | 0.4 | 0.01 | 7.2354102653488E-7 | 0.02 |
| 71 | 15 | PTA | Pretubular aggregate | wk09 | KIF18A | 81930 | 29441 | 0.4 | 0.53 | 0.01 | 2.6394946406557E-9 | 8.8935132422253E-5 |
| 71 | 15 | PTA | Pretubular aggregate | wk09 | NDUFAF6 | 137682 | 28625 | 0.4 | 0.66 | 0.05 | 3.3142136871497E-8 | 0.0011166911597482 |
| 71 | 15 | PTA | Pretubular aggregate | wk09 | CHTF18 | 63922 | 18435 | 0.37 | 0.6 | 0.04 | 4.1897481358181E-8 | 0.0014116937368825 |
| 71 | 15 | PTA | Pretubular aggregate | wk09 | ESPL1 | 9700 | 16856 | 0.37 | 0.46 | 0.01 | 5.4571761208037E-8 | 0.0018387409221436 |
| 71 | 15 | PTA | Pretubular aggregate | wk09 | KIF15 | 56992 | 17273 | 0.34 | 0.46 | 0.02 | 6.1870541492266E-7 | 0.02 |
| 71 | 15 | PTA | Pretubular aggregate | wk09 | TRIP13 | 9319 | 12307 | 0.33 | 0.53 | 0.04 | 5.692895166171E-7 | 0.01 |
| 71 | 15 | PTA | Pretubular aggregate | wk09 | BUB1B | 701 | 1149 | 0.32 | 0.33 | 0 | 5.7239686157358E-7 | 0.01 |
| 71 | 15 | PTA | Pretubular aggregate | wk09 | SKA1 | 220134 | 28109 | 0.32 | 0.53 | 0.05 | 1.3887230141193E-6 | 0.04 |
| 71 | 15 | PTA | Pretubular aggregate | wk09 | FOXM1 | 2305 | 3818 | 0.3 | 0.46 | 0.01 | 4.8112672769125E-8 | 0.0016211083962829 |
| 71 | 15 | PTA | Pretubular aggregate | wk09 | ARHGEF39 | 84904 | 25909 | 0.3 | 0.4 | 0.01 | 7.2354102653488E-7 | 0.02 |
| 71 | 15 | PTA | Pretubular aggregate | wk09 | CCDC74B | 91409 | 25267 | 0.3 | 0.4 | 0.01 | 7.2354102653488E-7 | 0.02 |
| 71 | 15 | PTA | Pretubular aggregate | wk09 | ZNF726 | 730087 | 32462 | 0.29 | 0.4 | 0.01 | 6.3993662354605E-7 | 0.02 |
| 71 | 15 | PTA | Pretubular aggregate | wk09 | TAF5 | 6877 | 11539 | 0.26 | 0.4 | 0.01 | 8.1761920644838E-7 | 0.02 |