Marker Genes
Dataset: Single-cell transcriptomics reveals gene expression dynamics of human fetal kidney development
- tissue: Kidney
- ontology: Kidney
- genotype: -
- stage: Fetal
- treatment condition: WT
- cell/nucleus: Cells
- pmid: 30789893
- subset name: wk09
- total genes: Not reported
- clustering: scran
- pseudotime: Monocle 2
- link: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE114530
Rows:67
dataset id | cluster id | cluster name | cell type name | sample id | gene symbol | entrez geneid | species specific geneid |
avg log fc (?)
|
pct 1 | pct 2 | p value | padj |
---|---|---|---|---|---|---|---|---|---|---|---|---|
71 | 15 | PTA | Pretubular aggregate | wk09 | UBE2C | 11065 | 15937 | 1.87 | 0.93 | 0.15 | 1.28970100854662e-10 | 4.34551857819697e-06 |
71 | 15 | PTA | Pretubular aggregate | wk09 | HMGB2 | 3148 | 5000 | 1.51 | 1 | 0.65 | 8.2310347784624e-08 | 0.00277336485825512 |
71 | 15 | PTA | Pretubular aggregate | wk09 | TOP2A | 7153 | 11989 | 1.48 | 0.8 | 0.05 | 7.72641904683278e-12 | 2.60333963363984e-07 |
71 | 15 | PTA | Pretubular aggregate | wk09 | TUBA1B | 10376 | 18809 | 1.38 | 1 | 0.91 | 8.42590279008027e-09 | 0.000283902368608965 |
71 | 15 | PTA | Pretubular aggregate | wk09 | CKS1B | 1163 | 19083 | 1.33 | 0.93 | 0.52 | 1.45202081099058e-07 | 0.00489243892055166 |
71 | 15 | PTA | Pretubular aggregate | wk09 | NUSAP1 | 51203 | 18538 | 1.23 | 0.8 | 0.19 | 2.16831964893497e-07 | 0.0073059362251215 |
71 | 15 | PTA | Pretubular aggregate | wk09 | CDK1 | 983 | 1722 | 1.16 | 0.73 | 0.08 | 5.32872753020713e-10 | 1.79546145402799e-05 |
71 | 15 | PTA | Pretubular aggregate | wk09 | CENPF | 1063 | 1857 | 1.09 | 0.8 | 0.11 | 2.18386533669771e-09 | 7.35831586546927e-05 |
71 | 15 | PTA | Pretubular aggregate | wk09 | PCLAF | 9768 | 28961 | 1.08 | 0.93 | 0.31 | 1.0553616189444e-06 | 0.03 |
71 | 15 | PTA | Pretubular aggregate | wk09 | BIRC5 | 332 | 593 | 1.05 | 1 | 0.23 | 1.99288762652927e-09 | 6.71483556882771e-05 |
71 | 15 | PTA | Pretubular aggregate | wk09 | MAD2L1 | 4085 | 6763 | 1.03 | 0.93 | 0.23 | 1.55569539135276e-08 | 0.000524176005162399 |
71 | 15 | PTA | Pretubular aggregate | wk09 | H2AFZ | 3015 | 4741 | 1.02 | 1 | 0.95 | 2.12407593856086e-08 | 0.000715686146738696 |
71 | 15 | PTA | Pretubular aggregate | wk09 | HMGB1 | 3146 | 4983 | 1.01 | 1 | 1 | 4.03962753036219e-08 | 0.00136111210008024 |
71 | 15 | PTA | Pretubular aggregate | wk09 | UBE2T | 29089 | 25009 | 0.96 | 0.73 | 0.11 | 1.60065508368349e-08 | 0.000539324723896316 |
71 | 15 | PTA | Pretubular aggregate | wk09 | AURKB | 9212 | 11390 | 0.9 | 0.66 | 0.11 | 1.24047361167068e-06 | 0.04 |
71 | 15 | PTA | Pretubular aggregate | wk09 | RRM2 | 6241 | 10452 | 0.88 | 0.73 | 0.08 | 1.3997666126613e-08 | 0.000471637362470098 |
71 | 15 | PTA | Pretubular aggregate | wk09 | CDCA3 | 83461 | 14624 | 0.82 | 0.53 | 0.02 | 1.80080870836882e-08 | 0.000606764486197791 |
71 | 15 | PTA | Pretubular aggregate | wk09 | PBK | 55872 | 18282 | 0.79 | 0.66 | 0.09 | 6.24388892037326e-07 | 0.02 |
71 | 15 | PTA | Pretubular aggregate | wk09 | MKI67 | 4288 | 7107 | 0.76 | 0.73 | 0.06 | 5.57407141825588e-09 | 0.000187812762366714 |
71 | 15 | PTA | Pretubular aggregate | wk09 | STMN1 | 3925 | 6510 | 0.74 | 1 | 0.98 | 5.55918103873996e-07 | 0.01 |
71 | 15 | PTA | Pretubular aggregate | wk09 | ZWINT | 11130 | 13195 | 0.73 | 0.86 | 0.2 | 7.84058816589931e-08 | 0.00264180777661811 |
71 | 15 | PTA | Pretubular aggregate | wk09 | PRC1 | 9055 | 9341 | 0.72 | 0.73 | 0.16 | 1.46782044155592e-06 | 0.04 |
71 | 15 | PTA | Pretubular aggregate | wk09 | PIMREG | 54478 | 25483 | 0.72 | 0.66 | 0.04 | 1.60804237640372e-09 | 5.41813798305469e-05 |
71 | 15 | PTA | Pretubular aggregate | wk09 | NUF2 | 83540 | 14621 | 0.71 | 0.66 | 0.08 | 2.21336938250059e-07 | 0.00745772679739749 |
71 | 15 | PTA | Pretubular aggregate | wk09 | CCNA2 | 890 | 1578 | 0.71 | 0.66 | 0.11 | 1.45502320468323e-06 | 0.04 |
71 | 15 | PTA | Pretubular aggregate | wk09 | RNASEH2A | 10535 | 18518 | 0.69 | 0.86 | 0.16 | 3.64944991595872e-08 | 0.00122964565468313 |
71 | 15 | PTA | Pretubular aggregate | wk09 | CENPU | 79682 | 21348 | 0.68 | 0.66 | 0.08 | 8.1669995907619e-08 | 0.00275178884211132 |
71 | 15 | PTA | Pretubular aggregate | wk09 | CDCA4 | 55038 | 14625 | 0.67 | 0.93 | 0.25 | 2.38466934204252e-07 | 0.00803490488107806 |
71 | 15 | PTA | Pretubular aggregate | wk09 | HIST1H2BH | 8345 | 4755 | 0.66 | 0.6 | 0.05 | 1.41612240231579e-07 | 0.00477148282236283 |
71 | 15 | PTA | Pretubular aggregate | wk09 | TACC3 | 10460 | 11524 | 0.65 | 0.66 | 0.09 | 5.27630740500402e-07 | 0.01 |
71 | 15 | PTA | Pretubular aggregate | wk09 | HJURP | 55355 | 25444 | 0.63 | 0.6 | 0.02 | 1.93023901146457e-09 | 6.50374732522872e-05 |
71 | 15 | PTA | Pretubular aggregate | wk09 | KIF23 | 9493 | 6392 | 0.63 | 0.66 | 0.08 | 1.54608604937669e-07 | 0.00520938233476981 |
71 | 15 | PTA | Pretubular aggregate | wk09 | CDCA5 | 113130 | 14626 | 0.62 | 0.6 | 0.06 | 4.42422414759053e-07 | 0.01 |
71 | 15 | PTA | Pretubular aggregate | wk09 | NCAPG | 64151 | 24304 | 0.61 | 0.73 | 0.06 | 1.65357811921142e-09 | 5.57156611487095e-05 |
71 | 15 | PTA | Pretubular aggregate | wk09 | RACGAP1 | 29127 | 9804 | 0.58 | 0.66 | 0.06 | 4.25117881672304e-08 | 0.00143239219050666 |
71 | 15 | PTA | Pretubular aggregate | wk09 | GTSE1 | 51512 | 13698 | 0.58 | 0.6 | 0.06 | 5.31420228149209e-07 | 0.01 |
71 | 15 | PTA | Pretubular aggregate | wk09 | MIS18BP1 | 55320 | 20190 | 0.57 | 0.8 | 0.13 | 8.82296568375861e-08 | 0.00297281005748563 |
71 | 15 | PTA | Pretubular aggregate | wk09 | DEPDC1 | 55635 | 22949 | 0.56 | 0.6 | 0.04 | 1.42711979897614e-08 | 0.00048085374506702 |
71 | 15 | PTA | Pretubular aggregate | wk09 | SMC2 | 10592 | 14011 | 0.56 | 0.86 | 0.16 | 1.01419248244353e-07 | 0.00341722015034524 |
71 | 15 | PTA | Pretubular aggregate | wk09 | CDC45 | 8318 | 1739 | 0.55 | 0.73 | 0.04 | 1.71821362805143e-10 | 5.78934899835649e-06 |
71 | 15 | PTA | Pretubular aggregate | wk09 | RFC3 | 5983 | 9971 | 0.55 | 0.66 | 0.11 | 6.48978474305096e-07 | 0.02 |
71 | 15 | PTA | Pretubular aggregate | wk09 | NEK2 | 4751 | 7745 | 0.52 | 0.46 | 0.02 | 6.90467653708534e-07 | 0.02 |
71 | 15 | PTA | Pretubular aggregate | wk09 | SPC25 | 57405 | 24031 | 0.52 | 0.66 | 0.05 | 2.0024097705696e-08 | 0.000674691948095721 |
71 | 15 | PTA | Pretubular aggregate | wk09 | KIFC1 | 3833 | 6389 | 0.52 | 0.66 | 0.02 | 1.54237081172108e-10 | 5.19686421301302e-06 |
71 | 15 | PTA | Pretubular aggregate | wk09 | BUB1 | 699 | 1148 | 0.51 | 0.53 | 0.04 | 3.42071717348301e-07 | 0.01 |
71 | 15 | PTA | Pretubular aggregate | wk09 | VRK1 | 7443 | 12718 | 0.5 | 0.73 | 0.12 | 5.95700140321643e-07 | 0.02 |
71 | 15 | PTA | Pretubular aggregate | wk09 | SPAG5 | 10615 | 13452 | 0.5 | 0.6 | 0.06 | 2.1001215483146e-07 | 0.0070761495448912 |
71 | 15 | PTA | Pretubular aggregate | wk09 | DLGAP5 | 9787 | 16864 | 0.49 | 0.53 | 0.04 | 3.42071717348301e-07 | 0.01 |
71 | 15 | PTA | Pretubular aggregate | wk09 | TTK | 7272 | 12401 | 0.48 | 0.46 | 0 | 2.0831797671905e-09 | 7.01906590757167e-05 |
71 | 15 | PTA | Pretubular aggregate | wk09 | C21orf58 | 54058 | 1300 | 0.47 | 0.66 | 0.04 | 2.80618486528682e-09 | 9.45515928509741e-05 |
71 | 15 | PTA | Pretubular aggregate | wk09 | OIP5 | 11339 | 20300 | 0.45 | 0.53 | 0.05 | 9.50626868838531e-07 | 0.03 |
71 | 15 | PTA | Pretubular aggregate | wk09 | UBR7 | 55148 | 20344 | 0.43 | 0.66 | 0.05 | 7.93319584085094e-09 | 0.000267301100661632 |
71 | 15 | PTA | Pretubular aggregate | wk09 | SKA3 | 221150 | 20262 | 0.43 | 0.53 | 0.04 | 1.6509148061963e-07 | 0.0055625923479978 |
71 | 15 | PTA | Pretubular aggregate | wk09 | CENPP | 401541 | 32933 | 0.4 | 0.4 | 0.01 | 7.23541026534885e-07 | 0.02 |
71 | 15 | PTA | Pretubular aggregate | wk09 | KIF18A | 81930 | 29441 | 0.4 | 0.53 | 0.01 | 2.63949464065569e-09 | 8.89351324222529e-05 |
71 | 15 | PTA | Pretubular aggregate | wk09 | NDUFAF6 | 137682 | 28625 | 0.4 | 0.66 | 0.05 | 3.31421368714969e-08 | 0.00111669115974822 |
71 | 15 | PTA | Pretubular aggregate | wk09 | CHTF18 | 63922 | 18435 | 0.37 | 0.6 | 0.04 | 4.18974813581806e-08 | 0.00141169373688254 |
71 | 15 | PTA | Pretubular aggregate | wk09 | ESPL1 | 9700 | 16856 | 0.37 | 0.46 | 0.01 | 5.45717612080373e-08 | 0.00183874092214361 |
71 | 15 | PTA | Pretubular aggregate | wk09 | KIF15 | 56992 | 17273 | 0.34 | 0.46 | 0.02 | 6.18705414922657e-07 | 0.02 |
71 | 15 | PTA | Pretubular aggregate | wk09 | TRIP13 | 9319 | 12307 | 0.33 | 0.53 | 0.04 | 5.69289516617101e-07 | 0.01 |
71 | 15 | PTA | Pretubular aggregate | wk09 | BUB1B | 701 | 1149 | 0.32 | 0.33 | 0 | 5.72396861573583e-07 | 0.01 |
71 | 15 | PTA | Pretubular aggregate | wk09 | SKA1 | 220134 | 28109 | 0.32 | 0.53 | 0.05 | 1.38872301411932e-06 | 0.04 |
71 | 15 | PTA | Pretubular aggregate | wk09 | FOXM1 | 2305 | 3818 | 0.3 | 0.46 | 0.01 | 4.81126727691248e-08 | 0.00162110839628289 |
71 | 15 | PTA | Pretubular aggregate | wk09 | ARHGEF39 | 84904 | 25909 | 0.3 | 0.4 | 0.01 | 7.23541026534885e-07 | 0.02 |
71 | 15 | PTA | Pretubular aggregate | wk09 | CCDC74B | 91409 | 25267 | 0.3 | 0.4 | 0.01 | 7.23541026534885e-07 | 0.02 |
71 | 15 | PTA | Pretubular aggregate | wk09 | ZNF726 | 730087 | 32462 | 0.29 | 0.4 | 0.01 | 6.39936623546047e-07 | 0.02 |
71 | 15 | PTA | Pretubular aggregate | wk09 | TAF5 | 6877 | 11539 | 0.26 | 0.4 | 0.01 | 8.17619206448377e-07 | 0.02 |