Marker Genes
Dataset: Single-cell transcriptomics reveals gene expression dynamics of human fetal kidney development
- tissue: Kidney
- ontology: Kidney
- genotype: -
- stage: Fetal
- treatment condition: WT
- cell/nucleus: Cells
- pmid: 30789893
- subset name: wk09
- total genes: Not reported
- clustering: scran
- pseudotime: Monocle 2
- link: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE114530
Rows:100
| dataset id | cluster id | cluster name | cell type name | sample id | gene symbol | entrez geneid | species specific geneid |
avg log fc (?)
|
pct 1 | pct 2 | p value | padj |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 71 | 13 | Pod | Podocyte | wk09 | PODXL | 5420 | 9171 | 3.36 | 1 | 0.19 | 2.3261532163286E-9 | 7.8377406470976E-5 |
| 71 | 13 | Pod | Podocyte | wk09 | NPHS2 | 7827 | 13394 | 3 | 1 | 0.07 | 5.1559862275116E-13 | 1.7372579994978E-8 |
| 71 | 13 | Pod | Podocyte | wk09 | PTPRO | 5800 | 9678 | 2.74 | 1 | 0.02 | 5.8739179025708E-17 | 1.9791578980922E-12 |
| 71 | 13 | Pod | Podocyte | wk09 | MAFB | 9935 | 6408 | 2.7 | 1 | 0.16 | 2.2556042147247E-9 | 7.6000328410934E-5 |
| 71 | 13 | Pod | Podocyte | wk09 | CLIC5 | 53405 | 13517 | 2.63 | 1 | 0.02 | 5.8739179025708E-17 | 1.9791578980922E-12 |
| 71 | 13 | Pod | Podocyte | wk09 | TPPP3 | 51673 | 24162 | 2.51 | 1 | 0.06 | 7.8830305636431E-14 | 2.6561083181139E-9 |
| 71 | 13 | Pod | Podocyte | wk09 | S100A6 | 6277 | 10496 | 2.4 | 1 | 0.44 | 1.2941154793307E-6 | 0.04 |
| 71 | 13 | Pod | Podocyte | wk09 | MYL9 | 10398 | 15754 | 2.27 | 1 | 0.34 | 2.2683089799845E-7 | 0.0076428402771597 |
| 71 | 13 | Pod | Podocyte | wk09 | AIF1 | 199 | 352 | 2.16 | 1 | 0.05 | 1.0696540948577E-14 | 3.6040925072135E-10 |
| 71 | 13 | Pod | Podocyte | wk09 | MXRA8 | 54587 | 7542 | 2.13 | 1 | 0.26 | 5.9840407266341E-8 | 0.0020162626824321 |
| 71 | 13 | Pod | Podocyte | wk09 | PLTP | 5360 | 9093 | 2.11 | 1 | 0.27 | 4.5992570133798E-8 | 0.0015496736580882 |
| 71 | 13 | Pod | Podocyte | wk09 | ST6GALNAC3 | 256435 | 19343 | 2.1 | 1 | 0.03 | 1.0058018351007E-15 | 3.3889487031884E-11 |
| 71 | 13 | Pod | Podocyte | wk09 | DDN | 23109 | 24458 | 2.05 | 1 | 0.01 | 1.8189045771171E-18 | 6.1286170821385E-14 |
| 71 | 13 | Pod | Podocyte | wk09 | MPP5 | 64398 | 18669 | 2.03 | 1 | 0.24 | 1.5747487517419E-8 | 0.00053059584441191 |
| 71 | 13 | Pod | Podocyte | wk09 | MME | 4311 | 7154 | 1.99 | 1 | 0.03 | 1.0058018351007E-15 | 3.3889487031884E-11 |
| 71 | 13 | Pod | Podocyte | wk09 | SOST | 50964 | 13771 | 1.97 | 0.87 | 0.03 | 4.9277066684626E-13 | 1.6603414848718E-8 |
| 71 | 13 | Pod | Podocyte | wk09 | ENPEP | 2028 | 3355 | 1.95 | 0.87 | 0.05 | 4.5313672096659E-12 | 1.5267988676248E-7 |
| 71 | 13 | Pod | Podocyte | wk09 | TNNI1 | 7135 | 11945 | 1.93 | 0.75 | 0.08 | 5.4659558405878E-8 | 0.0018416991609276 |
| 71 | 13 | Pod | Podocyte | wk09 | HTRA1 | 5654 | 9476 | 1.93 | 1 | 0.05 | 1.0696540948577E-14 | 3.6040925072135E-10 |
| 71 | 13 | Pod | Podocyte | wk09 | SEMA3B | 7869 | 10724 | 1.9 | 1 | 0.16 | 1.5705753981198E-9 | 5.2918967464249E-5 |
| 71 | 13 | Pod | Podocyte | wk09 | VASN | 114990 | 18517 | 1.9 | 1 | 0.26 | 3.3073383777483E-8 | 0.0011143745929985 |
| 71 | 13 | Pod | Podocyte | wk09 | NPHS1 | 4868 | 7908 | 1.88 | 0.87 | 0.07 | 1.0083504293802E-10 | 3.3975359367536E-6 |
| 71 | 13 | Pod | Podocyte | wk09 | RIPOR1 | 79567 | 25836 | 1.88 | 1 | 0.07 | 4.3537159462118E-13 | 1.4669410509166E-8 |
| 71 | 13 | Pod | Podocyte | wk09 | LTBP4 | 8425 | 6717 | 1.83 | 1 | 0.44 | 8.6825275740696E-7 | 0.02 |
| 71 | 13 | Pod | Podocyte | wk09 | PDLIM2 | 64236 | 13992 | 1.83 | 0.87 | 0.13 | 2.2461262824272E-8 | 0.00075680978960102 |
| 71 | 13 | Pod | Podocyte | wk09 | THSD7A | 221981 | 22207 | 1.79 | 0.87 | 0.08 | 1.254712969756E-9 | 4.2276298802959E-5 |
| 71 | 13 | Pod | Podocyte | wk09 | TCF21 | 6943 | 11632 | 1.78 | 1 | 0.32 | 6.7896434256105E-7 | 0.02 |
| 71 | 13 | Pod | Podocyte | wk09 | WT1 | 7490 | 12796 | 1.74 | 1 | 0.4 | 9.3283319846669E-7 | 0.03 |
| 71 | 13 | Pod | Podocyte | wk09 | TYRO3 | 7301 | 12446 | 1.71 | 1 | 0.2 | 4.479028114177E-9 | 0.00015091637327908 |
| 71 | 13 | Pod | Podocyte | wk09 | TNNT2 | 7139 | 11949 | 1.71 | 0.75 | 0.01 | 2.2400186181627E-13 | 7.5475187320375E-9 |
| 71 | 13 | Pod | Podocyte | wk09 | TGFBR3 | 7049 | 11774 | 1.64 | 1 | 0.05 | 1.5701099005822E-14 | 5.2903282990217E-10 |
| 71 | 13 | Pod | Podocyte | wk09 | ANXA1 | 301 | 533 | 1.6 | 0.62 | 0.03 | 2.0073783500741E-8 | 0.00067636606127396 |
| 71 | 13 | Pod | Podocyte | wk09 | SPOCK2 | 9806 | 13564 | 1.57 | 1 | 0.32 | 1.6551870597127E-7 | 0.0055769872789961 |
| 71 | 13 | Pod | Podocyte | wk09 | P3H2 | 55214 | 19317 | 1.56 | 1 | 0.1 | 9.3899475367643E-12 | 3.1638489230374E-7 |
| 71 | 13 | Pod | Podocyte | wk09 | GSN | 2934 | 4620 | 1.54 | 0.87 | 0.16 | 3.1944498156453E-7 | 0.01 |
| 71 | 13 | Pod | Podocyte | wk09 | NTNG1 | 22854 | 23319 | 1.51 | 0.87 | 0 | 8.339040426514E-18 | 2.8097562813096E-13 |
| 71 | 13 | Pod | Podocyte | wk09 | ITGA3 | 3675 | 6139 | 1.51 | 0.75 | 0.06 | 7.1451645524969E-9 | 0.00024074917443183 |
| 71 | 13 | Pod | Podocyte | wk09 | MRGPRF | 116535 | 24828 | 1.46 | 0.87 | 0.05 | 3.1601559602509E-12 | 1.0647829492469E-7 |
| 71 | 13 | Pod | Podocyte | wk09 | EMP3 | 2014 | 3335 | 1.45 | 1 | 0.25 | 7.697261780547E-8 | 0.0025935153843375 |
| 71 | 13 | Pod | Podocyte | wk09 | LOXL1 | 4016 | 6665 | 1.45 | 1 | 0.26 | 3.9973948930986E-7 | 0.01 |
| 71 | 13 | Pod | Podocyte | wk09 | PTH1R | 5745 | 9608 | 1.45 | 1 | 0.08 | 1.9084854526662E-12 | 6.4304508842134E-8 |
| 71 | 13 | Pod | Podocyte | wk09 | TUBB2A | 7280 | 12412 | 1.45 | 1 | 0.31 | 5.453219242039E-7 | 0.01 |
| 71 | 13 | Pod | Podocyte | wk09 | ST3GAL6 | 10402 | 18080 | 1.45 | 0.87 | 0.08 | 9.4157136056005E-10 | 3.172530542271E-5 |
| 71 | 13 | Pod | Podocyte | wk09 | ARMH4 | 145407 | 19846 | 1.43 | 1 | 0.17 | 5.9040602327453E-9 | 0.00019893140548212 |
| 71 | 13 | Pod | Podocyte | wk09 | LEPROT | 54741 | 29477 | 1.41 | 1 | 0.46 | 8.6889275665714E-7 | 0.02 |
| 71 | 13 | Pod | Podocyte | wk09 | SRGAP1 | 57522 | 17382 | 1.4 | 1 | 0.29 | 1.9312100675643E-7 | 0.0065070192016513 |
| 71 | 13 | Pod | Podocyte | wk09 | ADM | 133 | 259 | 1.4 | 0.87 | 0.17 | 6.0372791583605E-7 | 0.02 |
| 71 | 13 | Pod | Podocyte | wk09 | SNCA | 6622 | 11138 | 1.39 | 1 | 0.22 | 4.4835822959008E-8 | 0.0015106982187808 |
| 71 | 13 | Pod | Podocyte | wk09 | AXL | 558 | 905 | 1.37 | 0.87 | 0.19 | 3.9954118937844E-7 | 0.01 |
| 71 | 13 | Pod | Podocyte | wk09 | AQP3 | 360 | 636 | 1.31 | 0.75 | 0.05 | 1.3586393782263E-9 | 4.5777995209956E-5 |
| 71 | 13 | Pod | Podocyte | wk09 | CRB2 | 286204 | 18688 | 1.29 | 0.75 | 0.11 | 3.8320606831081E-7 | 0.01 |
| 71 | 13 | Pod | Podocyte | wk09 | PDE4DIP | 9659 | 15580 | 1.29 | 1 | 0.16 | 2.5429607255177E-9 | 8.5682518685594E-5 |
| 71 | 13 | Pod | Podocyte | wk09 | CDC14A | 8556 | 1718 | 1.27 | 0.75 | 0.02 | 1.1733887586567E-11 | 3.9536160834179E-7 |
| 71 | 13 | Pod | Podocyte | wk09 | SLC9A3R2 | 9351 | 11076 | 1.25 | 1 | 0.34 | 1.3786453529548E-6 | 0.04 |
| 71 | 13 | Pod | Podocyte | wk09 | ITIH5 | 80760 | 21449 | 1.24 | 0.75 | 0 | 2.6125746820448E-15 | 8.8028091336816E-11 |
| 71 | 13 | Pod | Podocyte | wk09 | SERPIND1 | 3053 | 4838 | 1.2 | 0.62 | 0.01 | 6.2691698308695E-11 | 2.1123340828132E-6 |
| 71 | 13 | Pod | Podocyte | wk09 | LEFTY1 | 10637 | 6552 | 1.19 | 0.87 | 0.07 | 9.9359348860127E-10 | 3.3478139004931E-5 |
| 71 | 13 | Pod | Podocyte | wk09 | PALLD | 23022 | 17068 | 1.17 | 1 | 0.27 | 5.7819463475978E-7 | 0.01 |
| 71 | 13 | Pod | Podocyte | wk09 | SYNPO | 11346 | 30672 | 1.15 | 0.75 | 0.1 | 2.8713003208837E-7 | 0.0096745593011856 |
| 71 | 13 | Pod | Podocyte | wk09 | ARHGEF3 | 50650 | 683 | 1.13 | 0.87 | 0.17 | 7.3877366001488E-7 | 0.02 |
| 71 | 13 | Pod | Podocyte | wk09 | INF2 | 64423 | 23791 | 1.09 | 1 | 0.19 | 1.9827244544616E-8 | 0.00066805917768628 |
| 71 | 13 | Pod | Podocyte | wk09 | BGN | 633 | 1044 | 1.09 | 1 | 0.15 | 1.0909678816353E-7 | 0.0036759071803818 |
| 71 | 13 | Pod | Podocyte | wk09 | FGF1 | 2246 | 3665 | 1.08 | 0.62 | 0.01 | 6.2691698308695E-11 | 2.1123340828132E-6 |
| 71 | 13 | Pod | Podocyte | wk09 | APLP1 | 333 | 597 | 1.06 | 0.75 | 0.11 | 1.0811418405329E-6 | 0.03 |
| 71 | 13 | Pod | Podocyte | wk09 | MCUB | 55013 | 26076 | 1.05 | 0.62 | 0.06 | 5.7503071889371E-7 | 0.01 |
| 71 | 13 | Pod | Podocyte | wk09 | EPHX1 | 2052 | 3401 | 1.02 | 0.87 | 0.19 | 1.0782196061342E-6 | 0.03 |
| 71 | 13 | Pod | Podocyte | wk09 | RAB11FIP1 | 80223 | 30265 | 1 | 0.87 | 0.16 | 3.9419157463741E-7 | 0.01 |
| 71 | 13 | Pod | Podocyte | wk09 | NPR1 | 4881 | 7943 | 1 | 0.75 | 0.08 | 1.7672278310979E-7 | 0.0059544974541012 |
| 71 | 13 | Pod | Podocyte | wk09 | PPP2R2B | 5521 | 9305 | 1 | 0.62 | 0.03 | 3.9258445198914E-8 | 0.0013227740525322 |
| 71 | 13 | Pod | Podocyte | wk09 | HIST1H2AC | 8334 | 4733 | 0.99 | 0.87 | 0.12 | 4.3793314538019E-8 | 0.001475571940044 |
| 71 | 13 | Pod | Podocyte | wk09 | MAGI2 | 9863 | 18957 | 0.97 | 0.62 | 0.03 | 5.4627301758809E-8 | 0.0018406123054613 |
| 71 | 13 | Pod | Podocyte | wk09 | PTPRD | 5789 | 9668 | 0.97 | 0.75 | 0.11 | 9.6531505479884E-7 | 0.03 |
| 71 | 13 | Pod | Podocyte | wk09 | PHYHIP | 9796 | 16865 | 0.97 | 0.75 | 0 | 2.6125746820448E-15 | 8.8028091336816E-11 |
| 71 | 13 | Pod | Podocyte | wk09 | MIR22HG | 84981 | 28219 | 0.95 | 0.87 | 0.07 | 2.5555409960212E-10 | 8.6106398319939E-6 |
| 71 | 13 | Pod | Podocyte | wk09 | TSPAN5 | 10098 | 17753 | 0.94 | 1 | 0.21 | 1.681971079006E-7 | 0.0056672333536028 |
| 71 | 13 | Pod | Podocyte | wk09 | NRIP2 | 83714 | 23078 | 0.93 | 0.5 | 0.01 | 1.4909765751244E-8 | 0.00050236964722241 |
| 71 | 13 | Pod | Podocyte | wk09 | FRMD1 | 79981 | 21240 | 0.91 | 0.62 | 0.02 | 1.5288559953156E-9 | 5.1513273906164E-5 |
| 71 | 13 | Pod | Podocyte | wk09 | FAM89A | 375061 | 25057 | 0.91 | 0.62 | 0.03 | 3.9258445198914E-8 | 0.0013227740525322 |
| 71 | 13 | Pod | Podocyte | wk09 | STAC | 6769 | 11353 | 0.89 | 0.5 | 0 | 1.8293310701531E-10 | 6.1637481077738E-6 |
| 71 | 13 | Pod | Podocyte | wk09 | TMEM150C | 441027 | 37263 | 0.84 | 0.62 | 0.02 | 2.7165529370871E-9 | 9.1531534662213E-5 |
| 71 | 13 | Pod | Podocyte | wk09 | CHI3L1 | 1116 | 1932 | 0.82 | 0.5 | 0.01 | 2.8024243635737E-8 | 0.00094424886506253 |
| 71 | 13 | Pod | Podocyte | wk09 | NFASC | 23114 | 29866 | 0.76 | 0.5 | 0.02 | 4.0649103655463E-7 | 0.01 |
| 71 | 13 | Pod | Podocyte | wk09 | NAP1L5 | 266812 | 19968 | 0.76 | 0.5 | 0.02 | 3.4085631805599E-7 | 0.01 |
| 71 | 13 | Pod | Podocyte | wk09 | ATP6V1G2 | 534 | 862 | 0.76 | 0.62 | 0.02 | 3.2840779247636E-9 | 0.00011065372159698 |
| 71 | 13 | Pod | Podocyte | wk09 | RBFOX1 | 54715 | 18222 | 0.75 | 0.5 | 0.01 | 1.8424070910087E-8 | 0.00062078064524448 |
| 71 | 13 | Pod | Podocyte | wk09 | JAKMIP2 | 9832 | 29067 | 0.75 | 0.75 | 0.05 | 3.0721814756498E-9 | 0.00010351408264054 |
| 71 | 13 | Pod | Podocyte | wk09 | SQOR | 58472 | 20390 | 0.74 | 0.5 | 0.01 | 2.2737352716868E-8 | 0.00076611236244214 |
| 71 | 13 | Pod | Podocyte | wk09 | CORO2B | 10391 | 2256 | 0.71 | 0.62 | 0.01 | 6.2691698308695E-11 | 2.1123340828132E-6 |
| 71 | 13 | Pod | Podocyte | wk09 | COL4A4 | 1286 | 2206 | 0.69 | 0.5 | 0.01 | 1.8424070910087E-8 | 0.00062078064524448 |
| 71 | 13 | Pod | Podocyte | wk09 | TRIM54 | 57159 | 16008 | 0.69 | 0.5 | 0 | 1.8293310701531E-10 | 6.1637481077738E-6 |
| 71 | 13 | Pod | Podocyte | wk09 | PTPRQ | 374462 | 9679 | 0.67 | 0.37 | 0 | 4.180252237535E-8 | 0.001408494188915 |
| 71 | 13 | Pod | Podocyte | wk09 | ADORA1 | 134 | 262 | 0.66 | 0.5 | 0.02 | 2.855101150413E-7 | 0.0096199778162017 |
| 71 | 13 | Pod | Podocyte | wk09 | CSDC2 | 27254 | 30359 | 0.65 | 0.5 | 0.01 | 1.4909765751244E-8 | 0.00050236964722241 |
| 71 | 13 | Pod | Podocyte | wk09 | MYH3 | 4621 | 7573 | 0.62 | 0.5 | 0.02 | 4.842398689813E-7 | 0.01 |
| 71 | 13 | Pod | Podocyte | wk09 | SEMA3G | 56920 | 30400 | 0.62 | 0.5 | 0.01 | 1.4909765751244E-8 | 0.00050236964722241 |
| 71 | 13 | Pod | Podocyte | wk09 | CA10 | 56934 | 1369 | 0.6 | 0.5 | 0 | 1.8293310701531E-10 | 6.1637481077738E-6 |
| 71 | 13 | Pod | Podocyte | wk09 | MYOZ1 | 58529 | 13752 | 0.58 | 0.37 | 0 | 4.180252237535E-8 | 0.001408494188915 |
| 71 | 13 | Pod | Podocyte | wk09 | KLRB1 | 3820 | 6373 | 0.55 | 0.5 | 0 | 1.8293310701531E-10 | 6.1637481077738E-6 |
| 71 | 13 | Pod | Podocyte | wk09 | RRAS | 6237 | 10447 | 0.55 | 0.5 | 0.02 | 4.842398689813E-7 | 0.01 |
| 71 | 13 | Pod | Podocyte | wk09 | ENSG00000261250 | NULL | 0.54 | 0.37 | 0 | 4.180252237535E-8 | 0.001408494188915 |