Marker Genes
Dataset: Single-cell transcriptomics reveals gene expression dynamics of human fetal kidney development
- tissue: Kidney
- ontology: Kidney
- genotype: -
- stage: Fetal
- treatment condition: WT
- cell/nucleus: Cells
- pmid: 30789893
- subset name: wk09
- total genes: Not reported
- clustering: scran
- pseudotime: Monocle 2
- link: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE114530
Rows:100
dataset id | cluster id | cluster name | cell type name | sample id | gene symbol | entrez geneid | species specific geneid |
avg log fc (?)
|
pct 1 | pct 2 | p value | padj |
---|---|---|---|---|---|---|---|---|---|---|---|---|
71 | 13 | Pod | Podocyte | wk09 | PODXL | 5420 | 9171 | 3.36 | 1 | 0.19 | 2.32615321632862e-09 | 7.83774064709764e-05 |
71 | 13 | Pod | Podocyte | wk09 | NPHS2 | 7827 | 13394 | 3 | 1 | 0.07 | 5.15598622751162e-13 | 1.73725799949777e-08 |
71 | 13 | Pod | Podocyte | wk09 | PTPRO | 5800 | 9678 | 2.74 | 1 | 0.02 | 5.87391790257083e-17 | 1.97915789809222e-12 |
71 | 13 | Pod | Podocyte | wk09 | MAFB | 9935 | 6408 | 2.7 | 1 | 0.16 | 2.25560421472469e-09 | 7.60003284109337e-05 |
71 | 13 | Pod | Podocyte | wk09 | CLIC5 | 53405 | 13517 | 2.63 | 1 | 0.02 | 5.87391790257083e-17 | 1.97915789809222e-12 |
71 | 13 | Pod | Podocyte | wk09 | TPPP3 | 51673 | 24162 | 2.51 | 1 | 0.06 | 7.8830305636431e-14 | 2.65610831811391e-09 |
71 | 13 | Pod | Podocyte | wk09 | S100A6 | 6277 | 10496 | 2.4 | 1 | 0.44 | 1.29411547933065e-06 | 0.04 |
71 | 13 | Pod | Podocyte | wk09 | MYL9 | 10398 | 15754 | 2.27 | 1 | 0.34 | 2.26830897998449e-07 | 0.00764284027715973 |
71 | 13 | Pod | Podocyte | wk09 | AIF1 | 199 | 352 | 2.16 | 1 | 0.05 | 1.06965409485769e-14 | 3.6040925072135e-10 |
71 | 13 | Pod | Podocyte | wk09 | MXRA8 | 54587 | 7542 | 2.13 | 1 | 0.26 | 5.98404072663409e-08 | 0.00201626268243209 |
71 | 13 | Pod | Podocyte | wk09 | PLTP | 5360 | 9093 | 2.11 | 1 | 0.27 | 4.59925701337982e-08 | 0.00154967365808819 |
71 | 13 | Pod | Podocyte | wk09 | ST6GALNAC3 | 256435 | 19343 | 2.1 | 1 | 0.03 | 1.00580183510073e-15 | 3.38894870318841e-11 |
71 | 13 | Pod | Podocyte | wk09 | DDN | 23109 | 24458 | 2.05 | 1 | 0.01 | 1.81890457711714e-18 | 6.1286170821385e-14 |
71 | 13 | Pod | Podocyte | wk09 | MPP5 | 64398 | 18669 | 2.03 | 1 | 0.24 | 1.57474875174189e-08 | 0.000530595844411913 |
71 | 13 | Pod | Podocyte | wk09 | MME | 4311 | 7154 | 1.99 | 1 | 0.03 | 1.00580183510073e-15 | 3.38894870318841e-11 |
71 | 13 | Pod | Podocyte | wk09 | SOST | 50964 | 13771 | 1.97 | 0.87 | 0.03 | 4.92770666846261e-13 | 1.66034148487179e-08 |
71 | 13 | Pod | Podocyte | wk09 | ENPEP | 2028 | 3355 | 1.95 | 0.87 | 0.05 | 4.53136720966587e-12 | 1.52679886762482e-07 |
71 | 13 | Pod | Podocyte | wk09 | TNNI1 | 7135 | 11945 | 1.93 | 0.75 | 0.08 | 5.4659558405878e-08 | 0.00184169916092765 |
71 | 13 | Pod | Podocyte | wk09 | HTRA1 | 5654 | 9476 | 1.93 | 1 | 0.05 | 1.06965409485769e-14 | 3.6040925072135e-10 |
71 | 13 | Pod | Podocyte | wk09 | SEMA3B | 7869 | 10724 | 1.9 | 1 | 0.16 | 1.5705753981198e-09 | 5.29189674642486e-05 |
71 | 13 | Pod | Podocyte | wk09 | VASN | 114990 | 18517 | 1.9 | 1 | 0.26 | 3.30733837774826e-08 | 0.0011143745929985 |
71 | 13 | Pod | Podocyte | wk09 | NPHS1 | 4868 | 7908 | 1.88 | 0.87 | 0.07 | 1.00835042938019e-10 | 3.3975359367536e-06 |
71 | 13 | Pod | Podocyte | wk09 | RIPOR1 | 79567 | 25836 | 1.88 | 1 | 0.07 | 4.3537159462118e-13 | 1.4669410509166e-08 |
71 | 13 | Pod | Podocyte | wk09 | LTBP4 | 8425 | 6717 | 1.83 | 1 | 0.44 | 8.68252757406961e-07 | 0.02 |
71 | 13 | Pod | Podocyte | wk09 | PDLIM2 | 64236 | 13992 | 1.83 | 0.87 | 0.13 | 2.24612628242721e-08 | 0.000756809789601023 |
71 | 13 | Pod | Podocyte | wk09 | THSD7A | 221981 | 22207 | 1.79 | 0.87 | 0.08 | 1.25471296975601e-09 | 4.22762988029591e-05 |
71 | 13 | Pod | Podocyte | wk09 | TCF21 | 6943 | 11632 | 1.78 | 1 | 0.32 | 6.78964342561047e-07 | 0.02 |
71 | 13 | Pod | Podocyte | wk09 | WT1 | 7490 | 12796 | 1.74 | 1 | 0.4 | 9.3283319846669e-07 | 0.03 |
71 | 13 | Pod | Podocyte | wk09 | TYRO3 | 7301 | 12446 | 1.71 | 1 | 0.2 | 4.47902811417699e-09 | 0.00015091637327908 |
71 | 13 | Pod | Podocyte | wk09 | TNNT2 | 7139 | 11949 | 1.71 | 0.75 | 0.01 | 2.24001861816274e-13 | 7.54751873203753e-09 |
71 | 13 | Pod | Podocyte | wk09 | TGFBR3 | 7049 | 11774 | 1.64 | 1 | 0.05 | 1.57010990058221e-14 | 5.29032829902171e-10 |
71 | 13 | Pod | Podocyte | wk09 | ANXA1 | 301 | 533 | 1.6 | 0.62 | 0.03 | 2.00737835007407e-08 | 0.000676366061273956 |
71 | 13 | Pod | Podocyte | wk09 | SPOCK2 | 9806 | 13564 | 1.57 | 1 | 0.32 | 1.65518705971273e-07 | 0.00557698727899608 |
71 | 13 | Pod | Podocyte | wk09 | P3H2 | 55214 | 19317 | 1.56 | 1 | 0.1 | 9.38994753676433e-12 | 3.16384892303737e-07 |
71 | 13 | Pod | Podocyte | wk09 | GSN | 2934 | 4620 | 1.54 | 0.87 | 0.16 | 3.19444981564526e-07 | 0.01 |
71 | 13 | Pod | Podocyte | wk09 | NTNG1 | 22854 | 23319 | 1.51 | 0.87 | 0 | 8.33904042651401e-18 | 2.80975628130963e-13 |
71 | 13 | Pod | Podocyte | wk09 | ITGA3 | 3675 | 6139 | 1.51 | 0.75 | 0.06 | 7.1451645524969e-09 | 0.000240749174431831 |
71 | 13 | Pod | Podocyte | wk09 | MRGPRF | 116535 | 24828 | 1.46 | 0.87 | 0.05 | 3.16015596025087e-12 | 1.06478294924693e-07 |
71 | 13 | Pod | Podocyte | wk09 | EMP3 | 2014 | 3335 | 1.45 | 1 | 0.25 | 7.69726178054703e-08 | 0.00259351538433752 |
71 | 13 | Pod | Podocyte | wk09 | LOXL1 | 4016 | 6665 | 1.45 | 1 | 0.26 | 3.99739489309858e-07 | 0.01 |
71 | 13 | Pod | Podocyte | wk09 | PTH1R | 5745 | 9608 | 1.45 | 1 | 0.08 | 1.90848545266618e-12 | 6.43045088421343e-08 |
71 | 13 | Pod | Podocyte | wk09 | TUBB2A | 7280 | 12412 | 1.45 | 1 | 0.31 | 5.45321924203901e-07 | 0.01 |
71 | 13 | Pod | Podocyte | wk09 | ST3GAL6 | 10402 | 18080 | 1.45 | 0.87 | 0.08 | 9.4157136056005e-10 | 3.17253054227103e-05 |
71 | 13 | Pod | Podocyte | wk09 | ARMH4 | 145407 | 19846 | 1.43 | 1 | 0.17 | 5.90406023274528e-09 | 0.000198931405482119 |
71 | 13 | Pod | Podocyte | wk09 | LEPROT | 54741 | 29477 | 1.41 | 1 | 0.46 | 8.68892756657143e-07 | 0.02 |
71 | 13 | Pod | Podocyte | wk09 | SRGAP1 | 57522 | 17382 | 1.4 | 1 | 0.29 | 1.93121006756434e-07 | 0.00650701920165129 |
71 | 13 | Pod | Podocyte | wk09 | ADM | 133 | 259 | 1.4 | 0.87 | 0.17 | 6.03727915836047e-07 | 0.02 |
71 | 13 | Pod | Podocyte | wk09 | SNCA | 6622 | 11138 | 1.39 | 1 | 0.22 | 4.48358229590076e-08 | 0.0015106982187808 |
71 | 13 | Pod | Podocyte | wk09 | AXL | 558 | 905 | 1.37 | 0.87 | 0.19 | 3.99541189378437e-07 | 0.01 |
71 | 13 | Pod | Podocyte | wk09 | AQP3 | 360 | 636 | 1.31 | 0.75 | 0.05 | 1.35863937822626e-09 | 4.57779952099556e-05 |
71 | 13 | Pod | Podocyte | wk09 | CRB2 | 286204 | 18688 | 1.29 | 0.75 | 0.11 | 3.83206068310806e-07 | 0.01 |
71 | 13 | Pod | Podocyte | wk09 | PDE4DIP | 9659 | 15580 | 1.29 | 1 | 0.16 | 2.54296072551771e-09 | 8.56825186855939e-05 |
71 | 13 | Pod | Podocyte | wk09 | CDC14A | 8556 | 1718 | 1.27 | 0.75 | 0.02 | 1.1733887586567e-11 | 3.95361608341789e-07 |
71 | 13 | Pod | Podocyte | wk09 | SLC9A3R2 | 9351 | 11076 | 1.25 | 1 | 0.34 | 1.37864535295477e-06 | 0.04 |
71 | 13 | Pod | Podocyte | wk09 | ITIH5 | 80760 | 21449 | 1.24 | 0.75 | 0 | 2.61257468204476e-15 | 8.80280913368162e-11 |
71 | 13 | Pod | Podocyte | wk09 | SERPIND1 | 3053 | 4838 | 1.2 | 0.62 | 0.01 | 6.26916983086952e-11 | 2.11233408281318e-06 |
71 | 13 | Pod | Podocyte | wk09 | LEFTY1 | 10637 | 6552 | 1.19 | 0.87 | 0.07 | 9.9359348860127e-10 | 3.34781390049312e-05 |
71 | 13 | Pod | Podocyte | wk09 | PALLD | 23022 | 17068 | 1.17 | 1 | 0.27 | 5.78194634759781e-07 | 0.01 |
71 | 13 | Pod | Podocyte | wk09 | SYNPO | 11346 | 30672 | 1.15 | 0.75 | 0.1 | 2.87130032088373e-07 | 0.00967455930118563 |
71 | 13 | Pod | Podocyte | wk09 | ARHGEF3 | 50650 | 683 | 1.13 | 0.87 | 0.17 | 7.38773660014875e-07 | 0.02 |
71 | 13 | Pod | Podocyte | wk09 | INF2 | 64423 | 23791 | 1.09 | 1 | 0.19 | 1.98272445446155e-08 | 0.000668059177686275 |
71 | 13 | Pod | Podocyte | wk09 | BGN | 633 | 1044 | 1.09 | 1 | 0.15 | 1.09096788163525e-07 | 0.00367590718038182 |
71 | 13 | Pod | Podocyte | wk09 | FGF1 | 2246 | 3665 | 1.08 | 0.62 | 0.01 | 6.26916983086952e-11 | 2.11233408281318e-06 |
71 | 13 | Pod | Podocyte | wk09 | APLP1 | 333 | 597 | 1.06 | 0.75 | 0.11 | 1.08114184053293e-06 | 0.03 |
71 | 13 | Pod | Podocyte | wk09 | MCUB | 55013 | 26076 | 1.05 | 0.62 | 0.06 | 5.75030718893714e-07 | 0.01 |
71 | 13 | Pod | Podocyte | wk09 | EPHX1 | 2052 | 3401 | 1.02 | 0.87 | 0.19 | 1.07821960613416e-06 | 0.03 |
71 | 13 | Pod | Podocyte | wk09 | RAB11FIP1 | 80223 | 30265 | 1 | 0.87 | 0.16 | 3.94191574637406e-07 | 0.01 |
71 | 13 | Pod | Podocyte | wk09 | NPR1 | 4881 | 7943 | 1 | 0.75 | 0.08 | 1.76722783109788e-07 | 0.00595449745410118 |
71 | 13 | Pod | Podocyte | wk09 | PPP2R2B | 5521 | 9305 | 1 | 0.62 | 0.03 | 3.92584451989138e-08 | 0.0013227740525322 |
71 | 13 | Pod | Podocyte | wk09 | HIST1H2AC | 8334 | 4733 | 0.99 | 0.87 | 0.12 | 4.37933145380187e-08 | 0.001475571940044 |
71 | 13 | Pod | Podocyte | wk09 | MAGI2 | 9863 | 18957 | 0.97 | 0.62 | 0.03 | 5.46273017588089e-08 | 0.00184061230546131 |
71 | 13 | Pod | Podocyte | wk09 | PTPRD | 5789 | 9668 | 0.97 | 0.75 | 0.11 | 9.65315054798837e-07 | 0.03 |
71 | 13 | Pod | Podocyte | wk09 | PHYHIP | 9796 | 16865 | 0.97 | 0.75 | 0 | 2.61257468204476e-15 | 8.80280913368162e-11 |
71 | 13 | Pod | Podocyte | wk09 | MIR22HG | 84981 | 28219 | 0.95 | 0.87 | 0.07 | 2.55554099602122e-10 | 8.6106398319939e-06 |
71 | 13 | Pod | Podocyte | wk09 | TSPAN5 | 10098 | 17753 | 0.94 | 1 | 0.21 | 1.68197107900601e-07 | 0.00566723335360283 |
71 | 13 | Pod | Podocyte | wk09 | NRIP2 | 83714 | 23078 | 0.93 | 0.5 | 0.01 | 1.49097657512438e-08 | 0.000502369647222408 |
71 | 13 | Pod | Podocyte | wk09 | FRMD1 | 79981 | 21240 | 0.91 | 0.62 | 0.02 | 1.5288559953156e-09 | 5.1513273906164e-05 |
71 | 13 | Pod | Podocyte | wk09 | FAM89A | 375061 | 25057 | 0.91 | 0.62 | 0.03 | 3.92584451989138e-08 | 0.0013227740525322 |
71 | 13 | Pod | Podocyte | wk09 | STAC | 6769 | 11353 | 0.89 | 0.5 | 0 | 1.82933107015309e-10 | 6.16374810777381e-06 |
71 | 13 | Pod | Podocyte | wk09 | TMEM150C | 441027 | 37263 | 0.84 | 0.62 | 0.02 | 2.71655293708711e-09 | 9.15315346622131e-05 |
71 | 13 | Pod | Podocyte | wk09 | CHI3L1 | 1116 | 1932 | 0.82 | 0.5 | 0.01 | 2.80242436357372e-08 | 0.000944248865062529 |
71 | 13 | Pod | Podocyte | wk09 | NFASC | 23114 | 29866 | 0.76 | 0.5 | 0.02 | 4.06491036554632e-07 | 0.01 |
71 | 13 | Pod | Podocyte | wk09 | NAP1L5 | 266812 | 19968 | 0.76 | 0.5 | 0.02 | 3.40856318055991e-07 | 0.01 |
71 | 13 | Pod | Podocyte | wk09 | ATP6V1G2 | 534 | 862 | 0.76 | 0.62 | 0.02 | 3.28407792476359e-09 | 0.000110653721596984 |
71 | 13 | Pod | Podocyte | wk09 | RBFOX1 | 54715 | 18222 | 0.75 | 0.5 | 0.01 | 1.84240709100871e-08 | 0.000620780645244476 |
71 | 13 | Pod | Podocyte | wk09 | JAKMIP2 | 9832 | 29067 | 0.75 | 0.75 | 0.05 | 3.07218147564981e-09 | 0.000103514082640545 |
71 | 13 | Pod | Podocyte | wk09 | SQOR | 58472 | 20390 | 0.74 | 0.5 | 0.01 | 2.27373527168677e-08 | 0.000766112362442141 |
71 | 13 | Pod | Podocyte | wk09 | CORO2B | 10391 | 2256 | 0.71 | 0.62 | 0.01 | 6.26916983086952e-11 | 2.11233408281318e-06 |
71 | 13 | Pod | Podocyte | wk09 | COL4A4 | 1286 | 2206 | 0.69 | 0.5 | 0.01 | 1.84240709100871e-08 | 0.000620780645244476 |
71 | 13 | Pod | Podocyte | wk09 | TRIM54 | 57159 | 16008 | 0.69 | 0.5 | 0 | 1.82933107015309e-10 | 6.16374810777381e-06 |
71 | 13 | Pod | Podocyte | wk09 | PTPRQ | 374462 | 9679 | 0.67 | 0.37 | 0 | 4.18025223753501e-08 | 0.00140849418891505 |
71 | 13 | Pod | Podocyte | wk09 | ADORA1 | 134 | 262 | 0.66 | 0.5 | 0.02 | 2.85510115041305e-07 | 0.00961997781620173 |
71 | 13 | Pod | Podocyte | wk09 | CSDC2 | 27254 | 30359 | 0.65 | 0.5 | 0.01 | 1.49097657512438e-08 | 0.000502369647222408 |
71 | 13 | Pod | Podocyte | wk09 | MYH3 | 4621 | 7573 | 0.62 | 0.5 | 0.02 | 4.842398689813e-07 | 0.01 |
71 | 13 | Pod | Podocyte | wk09 | SEMA3G | 56920 | 30400 | 0.62 | 0.5 | 0.01 | 1.49097657512438e-08 | 0.000502369647222408 |
71 | 13 | Pod | Podocyte | wk09 | CA10 | 56934 | 1369 | 0.6 | 0.5 | 0 | 1.82933107015309e-10 | 6.16374810777381e-06 |
71 | 13 | Pod | Podocyte | wk09 | MYOZ1 | 58529 | 13752 | 0.58 | 0.37 | 0 | 4.18025223753501e-08 | 0.00140849418891505 |
71 | 13 | Pod | Podocyte | wk09 | KLRB1 | 3820 | 6373 | 0.55 | 0.5 | 0 | 1.82933107015309e-10 | 6.16374810777381e-06 |
71 | 13 | Pod | Podocyte | wk09 | RRAS | 6237 | 10447 | 0.55 | 0.5 | 0.02 | 4.842398689813e-07 | 0.01 |
71 | 13 | Pod | Podocyte | wk09 | ENSG00000261250 | NULL | 0.54 | 0.37 | 0 | 4.18025223753501e-08 | 0.00140849418891505 |