Marker Genes
Dataset: Single-cell transcriptomics reveals gene expression dynamics of human fetal kidney development
- tissue: Kidney
- ontology: Kidney
- genotype: -
- stage: Fetal
- treatment condition: WT
- cell/nucleus: Cells
- pmid: 30789893
- subset name: wk09
- total genes: Not reported
- clustering: scran
- pseudotime: Monocle 2
- link: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE114530
Rows:9
| dataset id | cluster id | cluster name | cell type name | sample id | gene symbol | entrez geneid | species specific geneid |
avg log fc (?)
|
pct 1 | pct 2 | p value | padj |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 71 | 11 | NPCc | Nephron progenitor cells c | wk09 | NKAIN3 | 286183 | 26829 | 1.28 | 0.87 | 0.12 | 3.88393015261022e-08 | 0.00130865142562049 |
| 71 | 11 | NPCc | Nephron progenitor cells c | wk09 | CITED1 | 4435 | 1986 | 1.19 | 0.87 | 0.15 | 7.11715498436883e-07 | 0.02 |
| 71 | 11 | NPCc | Nephron progenitor cells c | wk09 | CHRNA1 | 1134 | 1955 | 0.93 | 0.5 | 0.02 | 3.40856318055991e-07 | 0.01 |
| 71 | 11 | NPCc | Nephron progenitor cells c | wk09 | SCG5 | 6447 | 10816 | 0.88 | 0.87 | 0.16 | 1.10217766420528e-06 | 0.03 |
| 71 | 11 | NPCc | Nephron progenitor cells c | wk09 | SIX2 | 10736 | 10888 | 0.84 | 0.87 | 0.15 | 2.73248892267095e-07 | 0.0092068481760475 |
| 71 | 11 | NPCc | Nephron progenitor cells c | wk09 | VSTM2B | 342865 | 33595 | 0.64 | 0.37 | 0 | 4.18025223753501e-08 | 0.00140849418891505 |
| 71 | 11 | NPCc | Nephron progenitor cells c | wk09 | PBX3 | 5090 | 8634 | 0.6 | 0.75 | 0.1 | 7.49724655899073e-07 | 0.02 |
| 71 | 11 | NPCc | Nephron progenitor cells c | wk09 | HTR2B | 3357 | 5294 | 0.47 | 0.5 | 0.02 | 8.13337232069839e-07 | 0.02 |
| 71 | 11 | NPCc | Nephron progenitor cells c | wk09 | TFF3 | 7033 | 11757 | 0.37 | 0.37 | 0 | 4.18025223753501e-08 | 0.00140849418891505 |