Marker Genes
Dataset: Single-cell transcriptomics reveals gene expression dynamics of human fetal kidney development
- tissue: Kidney
- ontology: Kidney
- genotype: -
- stage: Fetal
- treatment condition: WT
- cell/nucleus: Cells
- pmid: 30789893
- subset name: combined
- total genes: Not reported
- clustering: scran
- pseudotime: Monocle 2
- link: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE114530
Rows:100
dataset id | cluster id | cluster name | cell type name | sample id | gene symbol | entrez geneid | species specific geneid |
avg log fc (?)
|
pct 1 | pct 2 | p value | padj |
---|---|---|---|---|---|---|---|---|---|---|---|---|
70 | 9 | NPCa | Nephron progenitor cells a | combined | TMEM100 | 55273 | 25607 | 1.54 | 0.75 | 0.17 | 0 | 0 |
70 | 9 | NPCa | Nephron progenitor cells a | combined | RSPO3 | 84870 | 20866 | 1.4 | 0.59 | 0.09 | 0 | 0 |
70 | 9 | NPCa | Nephron progenitor cells a | combined | NKAIN3 | 286183 | 26829 | 1.26 | 0.64 | 0.11 | 0 | 0 |
70 | 9 | NPCa | Nephron progenitor cells a | combined | NNAT | 4826 | 7860 | 1.2 | 0.76 | 0.22 | 0 | 0 |
70 | 9 | NPCa | Nephron progenitor cells a | combined | PHLDA1 | 22822 | 8933 | 1.16 | 0.6 | 0.22 | 1.76555423774092e-226 | 5.94885844864424e-222 |
70 | 9 | NPCa | Nephron progenitor cells a | combined | DAPL1 | 92196 | 21490 | 1.13 | 0.55 | 0.14 | 6.20405616798838e-271 | 2.090394685242e-266 |
70 | 9 | NPCa | Nephron progenitor cells a | combined | PRXL2A | 84293 | 28651 | 1.11 | 0.87 | 0.5 | 9.80412427449952e-296 | 3.30340163304987e-291 |
70 | 9 | NPCa | Nephron progenitor cells a | combined | CITED1 | 4435 | 1986 | 1.09 | 0.5 | 0.08 | 0 | 0 |
70 | 9 | NPCa | Nephron progenitor cells a | combined | LRATD1 | 151354 | 20743 | 1.07 | 0.51 | 0.14 | 5.15791183809077e-254 | 1.73790681472631e-249 |
70 | 9 | NPCa | Nephron progenitor cells a | combined | CRABP2 | 1382 | 2339 | 1.07 | 0.74 | 0.22 | 0 | 0 |
70 | 9 | NPCa | Nephron progenitor cells a | combined | MEOX1 | 4222 | 7013 | 1.02 | 0.47 | 0.06 | 0 | 0 |
70 | 9 | NPCa | Nephron progenitor cells a | combined | SLC15A1 | 6564 | 10920 | 0.95 | 0.41 | 0.07 | 0 | 0 |
70 | 9 | NPCa | Nephron progenitor cells a | combined | BMPER | 168667 | 24154 | 0.94 | 0.44 | 0.07 | 0 | 0 |
70 | 9 | NPCa | Nephron progenitor cells a | combined | NR2F1 | 7025 | 7975 | 0.93 | 0.78 | 0.45 | 1.16571795339918e-204 | 3.92777007218318e-200 |
70 | 9 | NPCa | Nephron progenitor cells a | combined | SHISA3 | 152573 | 25159 | 0.93 | 0.53 | 0.17 | 3.41893574075856e-189 | 1.15197620849119e-184 |
70 | 9 | NPCa | Nephron progenitor cells a | combined | EYA1 | 2138 | 3519 | 0.86 | 0.41 | 0.1 | 2.51692730299112e-219 | 8.48053485469829e-215 |
70 | 9 | NPCa | Nephron progenitor cells a | combined | TUBA1A | 7846 | 20766 | 0.86 | 0.96 | 0.7 | 9.1042908110955e-232 | 3.06759974589052e-227 |
70 | 9 | NPCa | Nephron progenitor cells a | combined | SCG5 | 6447 | 10816 | 0.86 | 0.5 | 0.16 | 3.93689634939859e-196 | 1.32649785596636e-191 |
70 | 9 | NPCa | Nephron progenitor cells a | combined | SIX1 | 6495 | 10887 | 0.84 | 0.46 | 0.12 | 1.3782923316625e-213 | 4.64401818230363e-209 |
70 | 9 | NPCa | Nephron progenitor cells a | combined | MMP23B | 8510 | 7171 | 0.83 | 0.7 | 0.32 | 1.13620050298674e-175 | 3.82831397476353e-171 |
70 | 9 | NPCa | Nephron progenitor cells a | combined | HOXB-AS3 | 404266 | 40283 | 0.8 | 0.38 | 0.12 | 2.47698471123843e-134 | 8.34595228604677e-130 |
70 | 9 | NPCa | Nephron progenitor cells a | combined | HLA-DQB1 | 3119 | 4944 | 0.8 | 0.42 | 0.12 | 5.70952297624873e-172 | 1.92376667161725e-167 |
70 | 9 | NPCa | Nephron progenitor cells a | combined | IGF2 | 3481 | 5466 | 0.79 | 0.89 | 0.49 | 4.86372452730247e-203 | 1.6387833422293e-198 |
70 | 9 | NPCa | Nephron progenitor cells a | combined | SOX4 | 6659 | 11200 | 0.78 | 0.94 | 0.75 | 2.52129187149999e-164 | 8.49524083183205e-160 |
70 | 9 | NPCa | Nephron progenitor cells a | combined | HSPA6 | 3310 | 5239 | 0.78 | 0.13 | 0.06 | 2.6794824653283e-21 | 9.02824821867716e-17 |
70 | 9 | NPCa | Nephron progenitor cells a | combined | LAMA4 | 3910 | 6484 | 0.77 | 0.42 | 0.14 | 2.36404223853196e-149 | 7.9654039185096e-145 |
70 | 9 | NPCa | Nephron progenitor cells a | combined | WASF3 | 10810 | 12734 | 0.77 | 0.44 | 0.18 | 6.33464715426816e-117 | 2.13439601215911e-112 |
70 | 9 | NPCa | Nephron progenitor cells a | combined | NR2F2 | 7026 | 7976 | 0.76 | 0.87 | 0.62 | 4.15063168381327e-167 | 1.39851383954404e-162 |
70 | 9 | NPCa | Nephron progenitor cells a | combined | PDGFC | 56034 | 8801 | 0.74 | 0.46 | 0.2 | 5.21983226342269e-121 | 1.75877028283764e-116 |
70 | 9 | NPCa | Nephron progenitor cells a | combined | CHRNA1 | 1134 | 1955 | 0.72 | 0.28 | 0.02 | 0 | 0 |
70 | 9 | NPCa | Nephron progenitor cells a | combined | ENSG00000273015 | NULL | 0.72 | 0.48 | 0.24 | 4.51998241970992e-97 | 1.52296287649706e-92 | |
70 | 9 | NPCa | Nephron progenitor cells a | combined | HOXB9 | 3219 | 5120 | 0.71 | 0.39 | 0.14 | 2.93671765028595e-123 | 9.89497645087346e-119 |
70 | 9 | NPCa | Nephron progenitor cells a | combined | NREP | 9315 | 16834 | 0.7 | 0.83 | 0.66 | 8.67870819720432e-126 | 2.92420393996602e-121 |
70 | 9 | NPCa | Nephron progenitor cells a | combined | NBL1 | 4681 | 7650 | 0.7 | 0.35 | 0.13 | 3.69032576324362e-105 | 1.2434183626673e-100 |
70 | 9 | NPCa | Nephron progenitor cells a | combined | SEPTIN6 | 23157 | 15848 | 0.68 | 0.54 | 0.29 | 4.16209191589091e-105 | 1.40237525014028e-100 |
70 | 9 | NPCa | Nephron progenitor cells a | combined | HOXA10 | 3206 | 5100 | 0.67 | 0.73 | 0.51 | 2.37416962849434e-109 | 7.99952714624882e-105 |
70 | 9 | NPCa | Nephron progenitor cells a | combined | MEIS2 | 4212 | 7001 | 0.67 | 0.62 | 0.32 | 1.31354556103638e-121 | 4.42586041335599e-117 |
70 | 9 | NPCa | Nephron progenitor cells a | combined | ECEL1 | 9427 | 3147 | 0.65 | 0.27 | 0.05 | 1.09870992870803e-184 | 3.70199323378885e-180 |
70 | 9 | NPCa | Nephron progenitor cells a | combined | DDIT4 | 54541 | 24944 | 0.65 | 0.61 | 0.37 | 1.04738563141779e-90 | 3.52906114649909e-86 |
70 | 9 | NPCa | Nephron progenitor cells a | combined | COL2A1 | 1280 | 2200 | 0.63 | 0.38 | 0.14 | 3.02501556307439e-105 | 1.01924874382229e-100 |
70 | 9 | NPCa | Nephron progenitor cells a | combined | ELAVL4 | 1996 | 3315 | 0.63 | 0.24 | 0.04 | 7.9228895874927e-179 | 2.66953841760979e-174 |
70 | 9 | NPCa | Nephron progenitor cells a | combined | SIX2 | 10736 | 10888 | 0.63 | 0.3 | 0.08 | 5.86476396351117e-133 | 1.97607356986545e-128 |
70 | 9 | NPCa | Nephron progenitor cells a | combined | ITGA8 | 8516 | 6144 | 0.62 | 0.33 | 0.11 | 7.83183371242373e-108 | 2.63885805106405e-103 |
70 | 9 | NPCa | Nephron progenitor cells a | combined | HOXC6 | 3223 | 5128 | 0.61 | 0.36 | 0.14 | 3.1976076187451e-85 | 1.07740191105998e-80 |
70 | 9 | NPCa | Nephron progenitor cells a | combined | FAT3 | 120114 | 23112 | 0.61 | 0.25 | 0.04 | 1.13260884013143e-191 | 3.81621222593884e-187 |
70 | 9 | NPCa | Nephron progenitor cells a | combined | NRXN1 | 9378 | 8008 | 0.6 | 0.23 | 0.03 | 1.034501057422e-196 | 3.4856478628777e-192 |
70 | 9 | NPCa | Nephron progenitor cells a | combined | MARCKSL1 | 65108 | 7142 | 0.59 | 0.98 | 0.86 | 9.84005563446324e-174 | 3.31550834547604e-169 |
70 | 9 | NPCa | Nephron progenitor cells a | combined | AP1S2 | 8905 | 560 | 0.59 | 0.4 | 0.19 | 1.25266379953723e-74 | 4.22072540616075e-70 |
70 | 9 | NPCa | Nephron progenitor cells a | combined | NCAM1 | 4684 | 7656 | 0.58 | 0.37 | 0.17 | 7.10345705693156e-76 | 2.39343882076252e-71 |
70 | 9 | NPCa | Nephron progenitor cells a | combined | CCDC80 | 151887 | 30649 | 0.57 | 0.4 | 0.23 | 2.16511068848877e-49 | 7.29512395379406e-45 |
70 | 9 | NPCa | Nephron progenitor cells a | combined | TCF7L2 | 6934 | 11641 | 0.57 | 0.44 | 0.25 | 3.25362176926165e-65 | 1.09627531893502e-60 |
70 | 9 | NPCa | Nephron progenitor cells a | combined | CDH7 | 1005 | 1766 | 0.57 | 0.3 | 0.1 | 1.46874885144528e-97 | 4.94880238005973e-93 |
70 | 9 | NPCa | Nephron progenitor cells a | combined | UBE2E3 | 10477 | 12479 | 0.56 | 0.78 | 0.66 | 2.6770947355782e-87 | 9.02020300205718e-83 |
70 | 9 | NPCa | Nephron progenitor cells a | combined | PCBP4 | 57060 | 8652 | 0.55 | 0.34 | 0.17 | 1.27201585775569e-58 | 4.28593023112203e-54 |
70 | 9 | NPCa | Nephron progenitor cells a | combined | ITM2C | 81618 | 6175 | 0.55 | 0.96 | 0.88 | 1.53679323747958e-144 | 5.1780711343637e-140 |
70 | 9 | NPCa | Nephron progenitor cells a | combined | PEG10 | 23089 | 14005 | 0.55 | 0.49 | 0.34 | 1.90134952844507e-45 | 6.40640710114281e-41 |
70 | 9 | NPCa | Nephron progenitor cells a | combined | SOX11 | 6664 | 11191 | 0.55 | 0.46 | 0.33 | 9.44888881686602e-35 | 3.18370859795484e-30 |
70 | 9 | NPCa | Nephron progenitor cells a | combined | OSR1 | 130497 | 8111 | 0.54 | 0.21 | 0.03 | 9.18775343816969e-167 | 3.0957216434569e-162 |
70 | 9 | NPCa | Nephron progenitor cells a | combined | TPM1 | 7168 | 12010 | 0.54 | 0.86 | 0.58 | 9.94123442111093e-127 | 3.34959952584912e-122 |
70 | 9 | NPCa | Nephron progenitor cells a | combined | COL9A2 | 1298 | 2218 | 0.54 | 0.28 | 0.1 | 5.42988168826607e-75 | 1.82954433604437e-70 |
70 | 9 | NPCa | Nephron progenitor cells a | combined | CADM1 | 23705 | 5951 | 0.54 | 0.65 | 0.41 | 2.03771775385562e-75 | 6.86588619984112e-71 |
70 | 9 | NPCa | Nephron progenitor cells a | combined | MFAP2 | 4237 | 7033 | 0.53 | 0.47 | 0.3 | 2.11442946364588e-52 | 7.12435863480842e-48 |
70 | 9 | NPCa | Nephron progenitor cells a | combined | NPTX2 | 4885 | 7953 | 0.53 | 0.19 | 0.02 | 1.3342161224113e-171 | 4.49550780285264e-167 |
70 | 9 | NPCa | Nephron progenitor cells a | combined | DDAH2 | 23564 | 2716 | 0.53 | 0.79 | 0.65 | 2.08818246541906e-84 | 7.03592199898299e-80 |
70 | 9 | NPCa | Nephron progenitor cells a | combined | TCF4 | 6925 | 11634 | 0.53 | 0.43 | 0.28 | 1.10053726166008e-44 | 3.70815024943746e-40 |
70 | 9 | NPCa | Nephron progenitor cells a | combined | ST8SIA4 | 7903 | 10871 | 0.53 | 0.2 | 0.03 | 2.24232644098918e-148 | 7.55529471026895e-144 |
70 | 9 | NPCa | Nephron progenitor cells a | combined | RBPJ | 3516 | 5724 | 0.52 | 0.54 | 0.42 | 3.69116028561455e-46 | 1.24369954663497e-41 |
70 | 9 | NPCa | Nephron progenitor cells a | combined | MEIS1 | 4211 | 7000 | 0.52 | 0.34 | 0.17 | 1.28795922431466e-55 | 4.3396498104058e-51 |
70 | 9 | NPCa | Nephron progenitor cells a | combined | GAS1 | 2619 | 4165 | 0.51 | 0.46 | 0.27 | 1.3962239445857e-53 | 4.70443695888705e-49 |
70 | 9 | NPCa | Nephron progenitor cells a | combined | RSPO1 | 284654 | 21679 | 0.51 | 0.2 | 0.04 | 7.26919608112334e-102 | 2.4492829275737e-97 |
70 | 9 | NPCa | Nephron progenitor cells a | combined | HOXB5 | 3215 | 5116 | 0.51 | 0.26 | 0.1 | 1.34835203436266e-58 | 4.54313734458156e-54 |
70 | 9 | NPCa | Nephron progenitor cells a | combined | YBX3 | 8531 | 2428 | 0.51 | 0.74 | 0.56 | 1.77197952108561e-80 | 5.97050779834584e-76 |
70 | 9 | NPCa | Nephron progenitor cells a | combined | GFRA1 | 2674 | 4243 | 0.51 | 0.21 | 0.04 | 9.58380165378427e-118 | 3.22916612922607e-113 |
70 | 9 | NPCa | Nephron progenitor cells a | combined | SINHCAF | 58516 | 30702 | 0.5 | 0.69 | 0.51 | 1.51102127149356e-66 | 5.0912350721704e-62 |
70 | 9 | NPCa | Nephron progenitor cells a | combined | NTRK2 | 4915 | 8032 | 0.5 | 0.6 | 0.41 | 2.01078067770376e-56 | 6.77512441545505e-52 |
70 | 9 | NPCa | Nephron progenitor cells a | combined | ETV1 | 2115 | 3490 | 0.49 | 0.23 | 0.07 | 7.83372940150804e-73 | 2.63949678454412e-68 |
70 | 9 | NPCa | Nephron progenitor cells a | combined | ETV5 | 2119 | 3494 | 0.49 | 0.25 | 0.09 | 1.9520946082479e-74 | 6.57738757303046e-70 |
70 | 9 | NPCa | Nephron progenitor cells a | combined | NLRP1 | 22861 | 14374 | 0.49 | 0.53 | 0.35 | 6.02858669364377e-55 | 2.03127200055633e-50 |
70 | 9 | NPCa | Nephron progenitor cells a | combined | ABCA5 | 23461 | 35 | 0.49 | 0.26 | 0.11 | 1.82944993803243e-46 | 6.16414862120646e-42 |
70 | 9 | NPCa | Nephron progenitor cells a | combined | CASC15 | 401237 | 28245 | 0.49 | 0.24 | 0.1 | 2.61173311070492e-52 | 8.79997354320915e-48 |
70 | 9 | NPCa | Nephron progenitor cells a | combined | MEST | 4232 | 7028 | 0.49 | 0.91 | 0.78 | 3.87577498232808e-99 | 1.30590362254562e-94 |
70 | 9 | NPCa | Nephron progenitor cells a | combined | PCSK1N | 27344 | 17301 | 0.49 | 0.39 | 0.21 | 2.03915313131299e-52 | 6.87072256064598e-48 |
70 | 9 | NPCa | Nephron progenitor cells a | combined | NUDT4 | 11163 | 8051 | 0.48 | 0.41 | 0.3 | 5.58368838474175e-31 | 1.88136796435488e-26 |
70 | 9 | NPCa | Nephron progenitor cells a | combined | UNC5B | 219699 | 12568 | 0.48 | 0.28 | 0.12 | 5.41977638357895e-55 | 1.82613945468309e-50 |
70 | 9 | NPCa | Nephron progenitor cells a | combined | CNTFR | 1271 | 2170 | 0.47 | 0.3 | 0.14 | 5.83661905169153e-51 | 1.96659042327694e-46 |
70 | 9 | NPCa | Nephron progenitor cells a | combined | PDLIM1 | 9124 | 2067 | 0.47 | 0.39 | 0.24 | 1.96235667451615e-43 | 6.61196457911471e-39 |
70 | 9 | NPCa | Nephron progenitor cells a | combined | SOCS3 | 9021 | 19391 | 0.47 | 0.36 | 0.27 | 2.42495400249315e-18 | 8.17064001600042e-14 |
70 | 9 | NPCa | Nephron progenitor cells a | combined | NKAIN3-IT1 | 643763 | 48595 | 0.46 | 0.19 | 0.03 | 1.08110170436143e-122 | 3.64266408267541e-118 |
70 | 9 | NPCa | Nephron progenitor cells a | combined | HOXA11 | 3207 | 5101 | 0.46 | 0.25 | 0.11 | 1.1092733694808e-50 | 3.7375856911286e-46 |
70 | 9 | NPCa | Nephron progenitor cells a | combined | WSB1 | 26118 | 19221 | 0.45 | 0.8 | 0.74 | 2.04221161044035e-68 | 6.88102780021771e-64 |
70 | 9 | NPCa | Nephron progenitor cells a | combined | MAP2 | 4133 | 6839 | 0.45 | 0.21 | 0.07 | 1.43348962403646e-63 | 4.82999993922844e-59 |
70 | 9 | NPCa | Nephron progenitor cells a | combined | SPRY1 | 10252 | 11269 | 0.45 | 0.32 | 0.19 | 3.67292276789048e-34 | 1.23755459741302e-29 |
70 | 9 | NPCa | Nephron progenitor cells a | combined | RBFOX2 | 23543 | 9906 | 0.45 | 0.43 | 0.3 | 1.17540198257979e-36 | 3.96039944010434e-32 |
70 | 9 | NPCa | Nephron progenitor cells a | combined | REC8 | 9985 | 16879 | 0.44 | 0.28 | 0.17 | 4.50095007476814e-29 | 1.51655011819238e-24 |
70 | 9 | NPCa | Nephron progenitor cells a | combined | ACSL3 | 2181 | 3570 | 0.44 | 0.39 | 0.27 | 6.42057652498891e-29 | 2.16334905432976e-24 |
70 | 9 | NPCa | Nephron progenitor cells a | combined | HOXC10 | 3226 | 5122 | 0.44 | 0.26 | 0.13 | 1.77582490940075e-36 | 5.9834644497349e-32 |
70 | 9 | NPCa | Nephron progenitor cells a | combined | STAT3 | 6774 | 11364 | 0.44 | 0.46 | 0.35 | 4.49725097089514e-26 | 1.51530374213341e-21 |
70 | 9 | NPCa | Nephron progenitor cells a | combined | HOXB2 | 3212 | 5113 | 0.44 | 0.37 | 0.23 | 4.30403335640013e-36 | 1.45020099910546e-31 |
70 | 9 | NPCa | Nephron progenitor cells a | combined | RHPN1 | 114822 | 19973 | 0.43 | 0.21 | 0.08 | 1.63283329870898e-56 | 5.50166851667003e-52 |
70 | 9 | NPCa | Nephron progenitor cells a | combined | CCNG2 | 901 | 1593 | 0.43 | 0.38 | 0.27 | 8.64366344804273e-28 | 2.91239596218352e-23 |