Marker Genes
Dataset: Single-cell transcriptomics reveals gene expression dynamics of human fetal kidney development
- tissue: Kidney
- ontology: Kidney
- genotype: -
- stage: Fetal
- treatment condition: WT
- cell/nucleus: Cells
- pmid: 30789893
- subset name: combined
- total genes: Not reported
- clustering: scran
- pseudotime: Monocle 2
- link: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE114530
Rows:100
| dataset id | cluster id | cluster name | cell type name | sample id | gene symbol | entrez geneid | species specific geneid |
avg log fc (?)
|
pct 1 | pct 2 | p value | padj |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 70 | 7 | Leu | Leukocyte | combined | HLA-DRA | 3122 | 4947 | 3.68 | 0.83 | 0.02 | 0 | 0 |
| 70 | 7 | Leu | Leukocyte | combined | CD74 | 972 | 1697 | 3.51 | 0.93 | 0.17 | 1.0757394644651E-129 | 3.6245965515687E-125 |
| 70 | 7 | Leu | Leukocyte | combined | HLA-DPA1 | 3113 | 4938 | 3.13 | 0.78 | 0.01 | 0 | 0 |
| 70 | 7 | Leu | Leukocyte | combined | HLA-DPB1 | 3115 | 4940 | 3.11 | 0.81 | 0.04 | 6.5497900839325E-298 | 2.2068862708802E-293 |
| 70 | 7 | Leu | Leukocyte | combined | SRGN | 5552 | 9361 | 3.02 | 0.91 | 0.004 | 0 | 0 |
| 70 | 7 | Leu | Leukocyte | combined | CCL3 | 6348 | 10627 | 2.73 | 0.52 | 0.002 | 0 | 0 |
| 70 | 7 | Leu | Leukocyte | combined | CXCL8 | 3576 | 6025 | 2.71 | 0.57 | 0.006 | 0 | 0 |
| 70 | 7 | Leu | Leukocyte | combined | CCL4 | 6351 | 10630 | 2.64 | 0.41 | 0.002 | 0 | 0 |
| 70 | 7 | Leu | Leukocyte | combined | CST3 | 1471 | 2475 | 2.54 | 0.8 | 0.66 | 9.7573952481194E-31 | 3.2876567549014E-26 |
| 70 | 7 | Leu | Leukocyte | combined | TYROBP | 7305 | 12449 | 2.46 | 0.76 | 0.002 | 0 | 0 |
| 70 | 7 | Leu | Leukocyte | combined | HLA-DRB1 | 3123 | 4948 | 2.38 | 0.77 | 0.04 | 2.5430530877682E-282 | 8.5685630739263E-278 |
| 70 | 7 | Leu | Leukocyte | combined | CORO1A | 11151 | 2252 | 2.2 | 0.89 | 0.02 | 0 | 0 |
| 70 | 7 | Leu | Leukocyte | combined | LST1 | 7940 | 14189 | 2.16 | 0.82 | 0.005 | 0 | 0 |
| 70 | 7 | Leu | Leukocyte | combined | SAT1 | 6303 | 10540 | 2.13 | 0.85 | 0.45 | 6.6366368159928E-41 | 2.2361484087806E-36 |
| 70 | 7 | Leu | Leukocyte | combined | S100A4 | 6275 | 10494 | 2.13 | 0.72 | 0.1 | 3.0042166944972E-107 | 1.0122407730439E-102 |
| 70 | 7 | Leu | Leukocyte | combined | LYZ | 4069 | 6740 | 2.13 | 0.46 | 0.002 | 0 | 0 |
| 70 | 7 | Leu | Leukocyte | combined | HLA-B | 3106 | 4932 | 2.09 | 0.88 | 0.12 | 1.8905560353501E-137 | 6.3700395055085E-133 |
| 70 | 7 | Leu | Leukocyte | combined | ARHGDIB | 397 | 679 | 2.06 | 0.88 | 0.04 | 0 | 0 |
| 70 | 7 | Leu | Leukocyte | combined | LTB | 4050 | 6711 | 2.03 | 0.22 | 0.005 | 1.1436158045415E-170 | 3.8532990918221E-166 |
| 70 | 7 | Leu | Leukocyte | combined | B2M | 567 | 914 | 1.97 | 1 | 0.71 | 2.9534113288604E-66 | 9.9512241314622E-62 |
| 70 | 7 | Leu | Leukocyte | combined | FCER1G | 2207 | 3611 | 1.9 | 0.78 | 0.005 | 0 | 0 |
| 70 | 7 | Leu | Leukocyte | combined | SOD2 | 6648 | 11180 | 1.88 | 0.83 | 0.18 | 5.8736390923667E-88 | 1.979063955782E-83 |
| 70 | 7 | Leu | Leukocyte | combined | FTL | 2512 | 3999 | 1.83 | 1 | 0.97 | 9.3200440230182E-36 | 3.1402956331158E-31 |
| 70 | 7 | Leu | Leukocyte | combined | HLA-DRB5 | 3127 | 4953 | 1.78 | 0.59 | 0.02 | 0 | 0 |
| 70 | 7 | Leu | Leukocyte | combined | CCL3L3 | 414062 | 30554 | 1.76 | 0.24 | 0.002 | 0 | 0 |
| 70 | 7 | Leu | Leukocyte | combined | C15orf48 | 84419 | 29898 | 1.75 | 0.41 | 0.005 | 0 | 0 |
| 70 | 7 | Leu | Leukocyte | combined | CD83 | 9308 | 1703 | 1.75 | 0.76 | 0.07 | 3.6168491763962E-178 | 1.2186611614949E-173 |
| 70 | 7 | Leu | Leukocyte | combined | CCL4L2 | 9560 | 24066 | 1.74 | 0.27 | 0.002 | 0 | 0 |
| 70 | 7 | Leu | Leukocyte | combined | LAPTM5 | 7805 | 29612 | 1.73 | 0.74 | 0.005 | 0 | 0 |
| 70 | 7 | Leu | Leukocyte | combined | GPR183 | 1880 | 3128 | 1.71 | 0.64 | 0.003 | 0 | 0 |
| 70 | 7 | Leu | Leukocyte | combined | S100A9 | 6280 | 10499 | 1.64 | 0.19 | 0.003 | 5.2234914993557E-212 | 1.7600032257929E-207 |
| 70 | 7 | Leu | Leukocyte | combined | ARPC1B | 10095 | 704 | 1.63 | 0.89 | 0.17 | 7.9894828730307E-109 | 2.691976359239E-104 |
| 70 | 7 | Leu | Leukocyte | combined | IL1B | 3553 | 5992 | 1.58 | 0.42 | 0.002 | 0 | 0 |
| 70 | 7 | Leu | Leukocyte | combined | CD44 | 960 | 1681 | 1.57 | 0.7 | 0.01 | 0 | 0 |
| 70 | 7 | Leu | Leukocyte | combined | HLA-DQA1 | 3117 | 4942 | 1.51 | 0.5 | 0.002 | 0 | 0 |
| 70 | 7 | Leu | Leukocyte | combined | HLA-DQB1 | 3119 | 4944 | 1.51 | 0.65 | 0.13 | 4.6809416555027E-62 | 1.5771964814051E-57 |
| 70 | 7 | Leu | Leukocyte | combined | FTH1 | 2495 | 3976 | 1.49 | 1 | 0.99 | 3.8667894130958E-41 | 1.3028760248485E-36 |
| 70 | 7 | Leu | Leukocyte | combined | C1QA | 712 | 1241 | 1.48 | 0.21 | 0.001 | 0 | 0 |
| 70 | 7 | Leu | Leukocyte | combined | GPX1 | 2876 | 4553 | 1.47 | 0.88 | 0.52 | 8.9498594588036E-44 | 3.0155656460493E-39 |
| 70 | 7 | Leu | Leukocyte | combined | ANXA1 | 301 | 533 | 1.45 | 0.69 | 0.08 | 5.7011034626968E-107 | 1.9209298007211E-102 |
| 70 | 7 | Leu | Leukocyte | combined | TYMP | 1890 | 3148 | 1.45 | 0.62 | 0.02 | 6.3183780803814E-279 | 2.1289143104037E-274 |
| 70 | 7 | Leu | Leukocyte | combined | LSP1 | 4046 | 6707 | 1.45 | 0.65 | 0.008 | 0 | 0 |
| 70 | 7 | Leu | Leukocyte | combined | NEAT1 | 283131 | 30815 | 1.44 | 0.91 | 0.48 | 3.0625468510974E-43 | 1.0318945360088E-38 |
| 70 | 7 | Leu | Leukocyte | combined | COTL1 | 23406 | 18304 | 1.44 | 0.85 | 0.39 | 3.0427243544326E-48 | 1.0252155439825E-43 |
| 70 | 7 | Leu | Leukocyte | combined | HLA-DMA | 3108 | 4934 | 1.44 | 0.61 | 0.02 | 9.7545220101247E-307 | 3.2866886460914E-302 |
| 70 | 7 | Leu | Leukocyte | combined | PLAUR | 5329 | 9053 | 1.43 | 0.52 | 0.02 | 5.6869604751877E-218 | 1.9161644625097E-213 |
| 70 | 7 | Leu | Leukocyte | combined | RILPL2 | 196383 | 28787 | 1.42 | 0.68 | 0.1 | 3.1470123429481E-98 | 1.0603543388329E-93 |
| 70 | 7 | Leu | Leukocyte | combined | SH3BGRL3 | 83442 | 15568 | 1.41 | 0.94 | 0.52 | 1.6825740437592E-44 | 5.6692649830421E-40 |
| 70 | 7 | Leu | Leukocyte | combined | CYBA | 1535 | 2577 | 1.4 | 0.98 | 0.47 | 1.3020352779205E-55 | 4.3870776654253E-51 |
| 70 | 7 | Leu | Leukocyte | combined | CREM | 1390 | 2352 | 1.39 | 0.63 | 0.24 | 3.7321094849189E-31 | 1.2574969698486E-26 |
| 70 | 7 | Leu | Leukocyte | combined | ALOX5AP | 241 | 436 | 1.38 | 0.61 | 0.004 | 0 | 0 |
| 70 | 7 | Leu | Leukocyte | combined | ITGB2 | 3689 | 6155 | 1.36 | 0.62 | 0.007 | 0 | 0 |
| 70 | 7 | Leu | Leukocyte | combined | HLA-C | 3107 | 4933 | 1.34 | 0.82 | 0.18 | 5.5770460841501E-76 | 1.8791299075935E-71 |
| 70 | 7 | Leu | Leukocyte | combined | CD52 | 1043 | 1804 | 1.34 | 0.41 | 0.005 | 0 | 0 |
| 70 | 7 | Leu | Leukocyte | combined | CD37 | 951 | 1666 | 1.34 | 0.64 | 0.005 | 0 | 0 |
| 70 | 7 | Leu | Leukocyte | combined | DUSP2 | 1844 | 3068 | 1.33 | 0.49 | 0.03 | 2.4086653375135E-160 | 8.1157569882179E-156 |
| 70 | 7 | Leu | Leukocyte | combined | AIF1 | 199 | 352 | 1.32 | 0.87 | 0.24 | 5.7886412052693E-59 | 1.9504247677034E-54 |
| 70 | 7 | Leu | Leukocyte | combined | NR4A2 | 4929 | 7981 | 1.31 | 0.48 | 0.02 | 7.8244299590857E-230 | 2.6363634304143E-225 |
| 70 | 7 | Leu | Leukocyte | combined | CLEC10A | 10462 | 16916 | 1.29 | 0.41 | 0 | 0 | 0 |
| 70 | 7 | Leu | Leukocyte | combined | PLAC8 | 51316 | 19254 | 1.29 | 0.52 | 0.004 | 0 | 0 |
| 70 | 7 | Leu | Leukocyte | combined | RGCC | 28984 | 20369 | 1.28 | 0.49 | 0.04 | 1.0583665239995E-103 | 3.5660601659638E-99 |
| 70 | 7 | Leu | Leukocyte | combined | REL | 5966 | 9954 | 1.25 | 0.78 | 0.19 | 4.4146611083512E-65 | 1.4874759138478E-60 |
| 70 | 7 | Leu | Leukocyte | combined | RNASE6 | 6039 | 10048 | 1.25 | 0.56 | 0.002 | 0 | 0 |
| 70 | 7 | Leu | Leukocyte | combined | CD48 | 962 | 1683 | 1.24 | 0.62 | 0.001 | 0 | 0 |
| 70 | 7 | Leu | Leukocyte | combined | CTSS | 1520 | 2545 | 1.23 | 0.6 | 0.003 | 0 | 0 |
| 70 | 7 | Leu | Leukocyte | combined | PLEK | 5341 | 9070 | 1.21 | 0.55 | 0.002 | 0 | 0 |
| 70 | 7 | Leu | Leukocyte | combined | LIMD2 | 80774 | 28142 | 1.21 | 0.74 | 0.18 | 2.2649837830714E-62 | 7.6316363586809E-58 |
| 70 | 7 | Leu | Leukocyte | combined | CXCL2 | 2920 | 4603 | 1.2 | 0.28 | 0.02 | 4.5027610236029E-69 | 1.5171602992928E-64 |
| 70 | 7 | Leu | Leukocyte | combined | BID | 637 | 1050 | 1.19 | 0.61 | 0.1 | 2.1930724080651E-69 | 7.3893381717344E-65 |
| 70 | 7 | Leu | Leukocyte | combined | HCST | 10870 | 16977 | 1.17 | 0.57 | 0.003 | 0 | 0 |
| 70 | 7 | Leu | Leukocyte | combined | LCP1 | 3936 | 6528 | 1.15 | 0.6 | 0.004 | 0 | 0 |
| 70 | 7 | Leu | Leukocyte | combined | PYCARD | 29108 | 16608 | 1.14 | 0.61 | 0.05 | 6.7298604041855E-133 | 2.2675591645862E-128 |
| 70 | 7 | Leu | Leukocyte | combined | CCR7 | 1236 | 1608 | 1.14 | 0.32 | 0.001 | 0 | 0 |
| 70 | 7 | Leu | Leukocyte | combined | TSPO | 706 | 1158 | 1.13 | 0.55 | 0.16 | 5.3867716383813E-33 | 1.8150188358362E-28 |
| 70 | 7 | Leu | Leukocyte | combined | GMFG | 9535 | 4374 | 1.13 | 0.66 | 0.01 | 0 | 0 |
| 70 | 7 | Leu | Leukocyte | combined | RGS1 | 5996 | 9991 | 1.12 | 0.45 | 0.001 | 0 | 0 |
| 70 | 7 | Leu | Leukocyte | combined | FXYD5 | 53827 | 4029 | 1.12 | 0.66 | 0.04 | 8.504502045082E-207 | 2.8655069190699E-202 |
| 70 | 7 | Leu | Leukocyte | combined | S100A8 | 6279 | 10498 | 1.12 | 0.1 | 0 | 0 | 0 |
| 70 | 7 | Leu | Leukocyte | combined | CD53 | 963 | 1686 | 1.11 | 0.61 | 0.001 | 0 | 0 |
| 70 | 7 | Leu | Leukocyte | combined | PTPRE | 5791 | 9669 | 1.11 | 0.61 | 0.01 | 0 | 0 |
| 70 | 7 | Leu | Leukocyte | combined | NFKBIA | 4792 | 7797 | 1.1 | 0.84 | 0.48 | 6.3706516370668E-22 | 2.1465273625933E-17 |
| 70 | 7 | Leu | Leukocyte | combined | EMP3 | 2014 | 3335 | 1.09 | 0.76 | 0.22 | 1.1404912569863E-44 | 3.8427712412895E-40 |
| 70 | 7 | Leu | Leukocyte | combined | SPI1 | 6688 | 11241 | 1.09 | 0.49 | 0.008 | 0 | 0 |
| 70 | 7 | Leu | Leukocyte | combined | TNFAIP3 | 7128 | 11896 | 1.09 | 0.43 | 0.03 | 2.1278327678562E-123 | 7.1695197280146E-119 |
| 70 | 7 | Leu | Leukocyte | combined | RNASET2 | 8635 | 21686 | 1.08 | 0.65 | 0.17 | 2.0570134111944E-48 | 6.9309009876784E-44 |
| 70 | 7 | Leu | Leukocyte | combined | C1orf162 | 128346 | 28344 | 1.05 | 0.48 | 0.004 | 0 | 0 |
| 70 | 7 | Leu | Leukocyte | combined | MS4A6A | 64231 | 13375 | 1.05 | 0.34 | 0.001 | 0 | 0 |
| 70 | 7 | Leu | Leukocyte | combined | C1QC | 714 | 1245 | 1.04 | 0.17 | 0 | 0 | 0 |
| 70 | 7 | Leu | Leukocyte | combined | RETN | 56729 | 20389 | 1.03 | 0.38 | 0 | 0 | 0 |
| 70 | 7 | Leu | Leukocyte | combined | NAMPT | 10135 | 30092 | 1.01 | 0.63 | 0.16 | 1.0931931633069E-46 | 3.6834050444463E-42 |
| 70 | 7 | Leu | Leukocyte | combined | RPL28 | 6158 | 10330 | 1 | 1 | 0.92 | 2.5819805825575E-45 | 8.6997253748692E-41 |
| 70 | 7 | Leu | Leukocyte | combined | FCN1 | 2219 | 3623 | 0.99 | 0.24 | 0.001 | 0 | 0 |
| 70 | 7 | Leu | Leukocyte | combined | GPSM3 | 63940 | 13945 | 0.98 | 0.58 | 0.03 | 1.3699090283724E-217 | 4.6157714801981E-213 |
| 70 | 7 | Leu | Leukocyte | combined | PFN1 | 5216 | 8881 | 0.97 | 0.98 | 0.81 | 2.0855565505455E-35 | 7.0270742414079E-31 |
| 70 | 7 | Leu | Leukocyte | combined | STX11 | 8676 | 11429 | 0.97 | 0.47 | 0.005 | 0 | 0 |
| 70 | 7 | Leu | Leukocyte | combined | CXCR4 | 7852 | 2561 | 0.96 | 0.56 | 0.14 | 3.0854848142805E-35 | 1.0396232533236E-30 |
| 70 | 7 | Leu | Leukocyte | combined | HLA-E | 3133 | 4962 | 0.96 | 0.7 | 0.18 | 1.3624890226065E-47 | 4.5907705127703E-43 |
| 70 | 7 | Leu | Leukocyte | combined | RAC2 | 5880 | 9802 | 0.96 | 0.41 | 0.01 | 1.222951259788E-304 | 4.1206119747298E-300 |
| 70 | 7 | Leu | Leukocyte | combined | CD68 | 968 | 1693 | 0.96 | 0.41 | 0.01 | 2.6656749100572E-253 | 8.9817250419469E-249 |
| 70 | 7 | Leu | Leukocyte | combined | RGS2 | 5997 | 9998 | 0.95 | 0.5 | 0.25 | 9.8971653489651E-11 | 3.3347508926803E-6 |