Marker Genes
Dataset: Single-cell transcriptomics reveals gene expression dynamics of human fetal kidney development
- tissue: Kidney
- ontology: Kidney
- genotype: -
- stage: Fetal
- treatment condition: WT
- cell/nucleus: Cells
- pmid: 30789893
- subset name: combined
- total genes: Not reported
- clustering: scran
- pseudotime: Monocle 2
- link: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE114530
Rows:100
dataset id | cluster id | cluster name | cell type name | sample id | gene symbol | entrez geneid | species specific geneid |
avg log fc (?)
|
pct 1 | pct 2 | p value | padj |
---|---|---|---|---|---|---|---|---|---|---|---|---|
70 | 6 | IPC | Interstitial progenitor cell | combined | LGALS1 | 3956 | 6561 | 1.79 | 0.96 | 0.23 | 1.4195205116456e-242 | 4.78293241193867e-238 |
70 | 6 | IPC | Interstitial progenitor cell | combined | UBE2C | 11065 | 15937 | 1.65 | 0.77 | 0.11 | 2.31752219477872e-282 | 7.80865928308742e-278 |
70 | 6 | IPC | Interstitial progenitor cell | combined | PTN | 5764 | 9630 | 1.64 | 0.89 | 0.34 | 5.0406171107866e-151 | 1.69838552930844e-146 |
70 | 6 | IPC | Interstitial progenitor cell | combined | PCLAF | 9768 | 28961 | 1.54 | 0.92 | 0.25 | 6.33248721597664e-218 | 2.13366824255117e-213 |
70 | 6 | IPC | Interstitial progenitor cell | combined | HMGB2 | 3148 | 5000 | 1.51 | 0.94 | 0.47 | 1.14031380066627e-145 | 3.84217331996493e-141 |
70 | 6 | IPC | Interstitial progenitor cell | combined | HIST1H4C | 8364 | 4787 | 1.42 | 0.6 | 0.22 | 3.5944459944295e-80 | 1.21111263336308e-75 |
70 | 6 | IPC | Interstitial progenitor cell | combined | TOP2A | 7153 | 11989 | 1.4 | 0.66 | 0.11 | 7.41671916387424e-209 | 2.49898935507579e-204 |
70 | 6 | IPC | Interstitial progenitor cell | combined | CENPF | 1063 | 1857 | 1.4 | 0.68 | 0.11 | 9.79764307458797e-221 | 3.30121785755167e-216 |
70 | 6 | IPC | Interstitial progenitor cell | combined | PTTG1 | 9232 | 9690 | 1.34 | 0.7 | 0.22 | 2.40613356886327e-114 | 8.10722644692791e-110 |
70 | 6 | IPC | Interstitial progenitor cell | combined | COL1A1 | 1277 | 2197 | 1.32 | 0.88 | 0.21 | 1.80228068320533e-193 | 6.07260453399202e-189 |
70 | 6 | IPC | Interstitial progenitor cell | combined | COL1A2 | 1278 | 2198 | 1.28 | 0.86 | 0.19 | 1.91726581658916e-204 | 6.4600354424155e-200 |
70 | 6 | IPC | Interstitial progenitor cell | combined | TYMS | 7298 | 12441 | 1.25 | 0.78 | 0.21 | 3.13431724569508e-159 | 1.0560768527645e-154 |
70 | 6 | IPC | Interstitial progenitor cell | combined | PCOLCE | 5118 | 8738 | 1.23 | 0.81 | 0.12 | 1.93661828874793e-279 | 6.52524166210726e-275 |
70 | 6 | IPC | Interstitial progenitor cell | combined | NUSAP1 | 51203 | 18538 | 1.22 | 0.68 | 0.13 | 9.32391389847242e-185 | 3.1415995489513e-180 |
70 | 6 | IPC | Interstitial progenitor cell | combined | CDK1 | 983 | 1722 | 1.22 | 0.65 | 0.1 | 5.12609371026779e-218 | 1.72718601473763e-213 |
70 | 6 | IPC | Interstitial progenitor cell | combined | TPM2 | 7169 | 12011 | 1.21 | 0.86 | 0.22 | 7.76825265012866e-182 | 2.61743504793435e-177 |
70 | 6 | IPC | Interstitial progenitor cell | combined | MKI67 | 4288 | 7107 | 1.2 | 0.59 | 0.08 | 3.07281470334693e-217 | 1.03535418614571e-212 |
70 | 6 | IPC | Interstitial progenitor cell | combined | SMC4 | 10051 | 14013 | 1.19 | 0.79 | 0.24 | 1.25499166618427e-146 | 4.22856892004129e-142 |
70 | 6 | IPC | Interstitial progenitor cell | combined | TUBA1B | 10376 | 18809 | 1.17 | 1 | 0.82 | 2.52447742028975e-135 | 8.5059742199243e-131 |
70 | 6 | IPC | Interstitial progenitor cell | combined | EMILIN1 | 11117 | 19880 | 1.17 | 0.75 | 0.12 | 1.32450054670241e-234 | 4.46277214205911e-230 |
70 | 6 | IPC | Interstitial progenitor cell | combined | COL3A1 | 1281 | 2201 | 1.1 | 0.89 | 0.33 | 3.14366888906792e-114 | 1.05922779548254e-109 |
70 | 6 | IPC | Interstitial progenitor cell | combined | TNC | 3371 | 5318 | 1.06 | 0.61 | 0.09 | 1.77687324822053e-208 | 5.98699672255425e-204 |
70 | 6 | IPC | Interstitial progenitor cell | combined | BIRC5 | 332 | 593 | 1.05 | 0.62 | 0.11 | 3.08481620385129e-173 | 1.03939797172565e-168 |
70 | 6 | IPC | Interstitial progenitor cell | combined | SULT1E1 | 6783 | 11377 | 1.04 | 0.71 | 0.15 | 7.31126623741621e-155 | 2.46345804603502e-150 |
70 | 6 | IPC | Interstitial progenitor cell | combined | TUBB6 | 84617 | 20776 | 1.02 | 0.68 | 0.14 | 3.76599558186681e-166 | 1.2689145513542e-161 |
70 | 6 | IPC | Interstitial progenitor cell | combined | CALD1 | 800 | 1441 | 1.02 | 0.93 | 0.54 | 1.48315475713025e-106 | 4.99734163867467e-102 |
70 | 6 | IPC | Interstitial progenitor cell | combined | RARRES2 | 5919 | 9868 | 1.01 | 0.64 | 0.14 | 1.66645404198003e-150 | 5.6149502490475e-146 |
70 | 6 | IPC | Interstitial progenitor cell | combined | CLDN11 | 5010 | 8514 | 1.01 | 0.56 | 0.11 | 1.00301488909936e-131 | 3.37955836733137e-127 |
70 | 6 | IPC | Interstitial progenitor cell | combined | H2AFX | 3014 | 4739 | 0.99 | 0.69 | 0.24 | 1.18662343013578e-98 | 3.9982089854995e-94 |
70 | 6 | IPC | Interstitial progenitor cell | combined | H2AFZ | 3015 | 4741 | 0.99 | 0.99 | 0.82 | 2.26294160483659e-116 | 7.6247554433364e-112 |
70 | 6 | IPC | Interstitial progenitor cell | combined | ARL6IP1 | 23204 | 697 | 0.98 | 0.79 | 0.61 | 1.96583795416935e-32 | 6.62369440277821e-28 |
70 | 6 | IPC | Interstitial progenitor cell | combined | CCNB1 | 891 | 1579 | 0.98 | 0.43 | 0.11 | 6.31612819482395e-75 | 2.12815623396398e-70 |
70 | 6 | IPC | Interstitial progenitor cell | combined | UBE2S | 27338 | 17895 | 0.97 | 0.65 | 0.3 | 2.29172848846596e-59 | 7.7217499690372e-55 |
70 | 6 | IPC | Interstitial progenitor cell | combined | RRM2 | 6241 | 10452 | 0.97 | 0.49 | 0.08 | 3.67313738519774e-148 | 1.23762691056853e-143 |
70 | 6 | IPC | Interstitial progenitor cell | combined | PRC1 | 9055 | 9341 | 0.95 | 0.54 | 0.09 | 5.24652330605049e-160 | 1.76776356274065e-155 |
70 | 6 | IPC | Interstitial progenitor cell | combined | MFAP4 | 4239 | 7035 | 0.95 | 0.72 | 0.15 | 2.17154893547021e-160 | 7.31681698317332e-156 |
70 | 6 | IPC | Interstitial progenitor cell | combined | OLFML3 | 56944 | 24956 | 0.94 | 0.67 | 0.11 | 1.20200555577322e-195 | 4.05003751962228e-191 |
70 | 6 | IPC | Interstitial progenitor cell | combined | AURKB | 9212 | 11390 | 0.94 | 0.56 | 0.08 | 7.92334397856471e-197 | 2.66969152013759e-192 |
70 | 6 | IPC | Interstitial progenitor cell | combined | MAD2L1 | 4085 | 6763 | 0.94 | 0.74 | 0.19 | 1.26378147370383e-139 | 4.25818529749769e-135 |
70 | 6 | IPC | Interstitial progenitor cell | combined | CKS1B | 1163 | 19083 | 0.93 | 0.8 | 0.34 | 3.04274575158027e-93 | 1.02522275353746e-88 |
70 | 6 | IPC | Interstitial progenitor cell | combined | CTSC | 1075 | 2528 | 0.93 | 0.79 | 0.26 | 4.69639064556416e-119 | 1.58240186411639e-114 |
70 | 6 | IPC | Interstitial progenitor cell | combined | CKS2 | 1164 | 2000 | 0.93 | 0.64 | 0.35 | 5.83425217121827e-44 | 1.96579292657028e-39 |
70 | 6 | IPC | Interstitial progenitor cell | combined | TK1 | 7083 | 11830 | 0.93 | 0.6 | 0.12 | 7.78408785220473e-152 | 2.62277056092186e-147 |
70 | 6 | IPC | Interstitial progenitor cell | combined | FBLN1 | 2192 | 3600 | 0.93 | 0.78 | 0.3 | 8.32696952080796e-98 | 2.80568911034103e-93 |
70 | 6 | IPC | Interstitial progenitor cell | combined | CYP1B1 | 1545 | 2597 | 0.91 | 0.62 | 0.13 | 4.57543552205796e-137 | 1.54164724480221e-132 |
70 | 6 | IPC | Interstitial progenitor cell | combined | ZWINT | 11130 | 13195 | 0.9 | 0.63 | 0.16 | 5.81223046440125e-119 | 1.95837293267536e-114 |
70 | 6 | IPC | Interstitial progenitor cell | combined | UBE2T | 29089 | 25009 | 0.9 | 0.64 | 0.14 | 7.06533730534367e-146 | 2.3805947516625e-141 |
70 | 6 | IPC | Interstitial progenitor cell | combined | TUBA1C | 84790 | 20768 | 0.9 | 0.53 | 0.2 | 1.39986905301805e-57 | 4.71671878723903e-53 |
70 | 6 | IPC | Interstitial progenitor cell | combined | MXD3 | 83463 | 14008 | 0.89 | 0.45 | 0.05 | 2.18306686505504e-204 | 7.35562549511647e-200 |
70 | 6 | IPC | Interstitial progenitor cell | combined | CDC20 | 991 | 1723 | 0.89 | 0.4 | 0.07 | 5.22425533404469e-100 | 1.76026059225302e-95 |
70 | 6 | IPC | Interstitial progenitor cell | combined | B2M | 567 | 914 | 0.89 | 0.99 | 0.7 | 3.68189369227596e-108 | 1.24057726067546e-103 |
70 | 6 | IPC | Interstitial progenitor cell | combined | MEG3 | 55384 | 14575 | 0.86 | 0.68 | 0.19 | 6.30850905692104e-100 | 2.12558904163898e-95 |
70 | 6 | IPC | Interstitial progenitor cell | combined | ASPM | 259266 | 19048 | 0.86 | 0.4 | 0.05 | 9.6505366049743e-165 | 3.25165180368004e-160 |
70 | 6 | IPC | Interstitial progenitor cell | combined | TMSB15A | 11013 | 30744 | 0.86 | 0.8 | 0.27 | 1.20238727609042e-106 | 4.05132368805905e-102 |
70 | 6 | IPC | Interstitial progenitor cell | combined | PIMREG | 54478 | 25483 | 0.85 | 0.43 | 0.08 | 4.6229572261332e-115 | 1.55765920777332e-110 |
70 | 6 | IPC | Interstitial progenitor cell | combined | HMGN2 | 3151 | 4986 | 0.84 | 0.99 | 0.91 | 3.66786517552264e-112 | 1.2358504922406e-107 |
70 | 6 | IPC | Interstitial progenitor cell | combined | COL6A3 | 1293 | 2213 | 0.84 | 0.6 | 0.12 | 8.78379402454997e-140 | 2.95961155863187e-135 |
70 | 6 | IPC | Interstitial progenitor cell | combined | KPNA2 | 3838 | 6395 | 0.82 | 0.6 | 0.32 | 1.2511527185604e-37 | 4.21563396991741e-33 |
70 | 6 | IPC | Interstitial progenitor cell | combined | CENPK | 64105 | 29479 | 0.82 | 0.54 | 0.1 | 2.94480307700019e-152 | 9.92221948764446e-148 |
70 | 6 | IPC | Interstitial progenitor cell | combined | TPX2 | 22974 | 1249 | 0.82 | 0.42 | 0.07 | 3.54670328253705e-123 | 1.19502620401804e-118 |
70 | 6 | IPC | Interstitial progenitor cell | combined | FBLN5 | 10516 | 3602 | 0.82 | 0.49 | 0.08 | 3.87425547285834e-143 | 1.30539163902489e-138 |
70 | 6 | IPC | Interstitial progenitor cell | combined | NUF2 | 83540 | 14621 | 0.81 | 0.43 | 0.07 | 2.1312799500719e-131 | 7.18113466377227e-127 |
70 | 6 | IPC | Interstitial progenitor cell | combined | EMCN | 51705 | 16041 | 0.81 | 0.57 | 0.08 | 5.40033946104749e-186 | 1.81959037800534e-181 |
70 | 6 | IPC | Interstitial progenitor cell | combined | SMC2 | 10592 | 14011 | 0.81 | 0.64 | 0.2 | 3.013174578165e-92 | 1.01525904236692e-87 |
70 | 6 | IPC | Interstitial progenitor cell | combined | MOXD1 | 26002 | 21063 | 0.8 | 0.55 | 0.1 | 2.52199821305182e-131 | 8.49762077905681e-127 |
70 | 6 | IPC | Interstitial progenitor cell | combined | KIF20B | 9585 | 7212 | 0.8 | 0.49 | 0.12 | 4.367275794634e-93 | 1.47150990624398e-88 |
70 | 6 | IPC | Interstitial progenitor cell | combined | CDKN3 | 1033 | 1791 | 0.79 | 0.4 | 0.07 | 1.30369359661594e-110 | 4.39266520443776e-106 |
70 | 6 | IPC | Interstitial progenitor cell | combined | CCNB2 | 9133 | 1580 | 0.79 | 0.46 | 0.11 | 9.12972933581208e-88 | 3.07617100240852e-83 |
70 | 6 | IPC | Interstitial progenitor cell | combined | SERPINH1 | 871 | 1546 | 0.78 | 0.9 | 0.57 | 1.04145603412923e-74 | 3.50908196139502e-70 |
70 | 6 | IPC | Interstitial progenitor cell | combined | GTSE1 | 51512 | 13698 | 0.77 | 0.44 | 0.07 | 4.75511327652155e-141 | 1.60218786739117e-136 |
70 | 6 | IPC | Interstitial progenitor cell | combined | IGF2 | 3481 | 5466 | 0.77 | 0.9 | 0.5 | 5.10674591888327e-60 | 1.72066696990853e-55 |
70 | 6 | IPC | Interstitial progenitor cell | combined | MARCKS | 4082 | 6759 | 0.77 | 0.94 | 0.64 | 1.13085522951581e-68 | 3.81030361033056e-64 |
70 | 6 | IPC | Interstitial progenitor cell | combined | TUBB | 203068 | 20778 | 0.77 | 0.99 | 0.9 | 4.56062781293554e-92 | 1.5366579352905e-87 |
70 | 6 | IPC | Interstitial progenitor cell | combined | CENPE | 1062 | 1856 | 0.76 | 0.37 | 0.04 | 6.07217941645001e-163 | 2.04596013257867e-158 |
70 | 6 | IPC | Interstitial progenitor cell | combined | CENPA | 1058 | 1851 | 0.76 | 0.31 | 0.04 | 9.5623918358149e-101 | 3.22195230515947e-96 |
70 | 6 | IPC | Interstitial progenitor cell | combined | TGFBI | 7045 | 11771 | 0.76 | 0.54 | 0.09 | 1.61972466501464e-149 | 5.45750028630032e-145 |
70 | 6 | IPC | Interstitial progenitor cell | combined | CENPW | 387103 | 21488 | 0.76 | 0.63 | 0.19 | 6.07792323331372e-93 | 2.04789545423273e-88 |
70 | 6 | IPC | Interstitial progenitor cell | combined | SGO2 | 151246 | 30812 | 0.74 | 0.39 | 0.07 | 2.12136047851286e-107 | 7.14771199630124e-103 |
70 | 6 | IPC | Interstitial progenitor cell | combined | KIF20A | 10112 | 9787 | 0.74 | 0.33 | 0.03 | 4.8420531849258e-160 | 1.6314814001289e-155 |
70 | 6 | IPC | Interstitial progenitor cell | combined | DUT | 1854 | 3078 | 0.74 | 0.78 | 0.56 | 1.40222614960439e-33 | 4.72466078847703e-29 |
70 | 6 | IPC | Interstitial progenitor cell | combined | DCN | 1634 | 2705 | 0.73 | 0.49 | 0.15 | 4.02220452734379e-61 | 1.35524159344322e-56 |
70 | 6 | IPC | Interstitial progenitor cell | combined | PCDH18 | 54510 | 14268 | 0.73 | 0.5 | 0.11 | 2.00415623180869e-103 | 6.75280400745621e-99 |
70 | 6 | IPC | Interstitial progenitor cell | combined | HMGB1 | 3146 | 4983 | 0.73 | 1 | 0.96 | 7.01574241598649e-100 | 2.36388424964249e-95 |
70 | 6 | IPC | Interstitial progenitor cell | combined | H2AFV | 94239 | 20664 | 0.73 | 0.83 | 0.47 | 1.53978066460678e-70 | 5.18813697132607e-66 |
70 | 6 | IPC | Interstitial progenitor cell | combined | PDGFRA | 5156 | 8803 | 0.73 | 0.52 | 0.07 | 8.04304132501404e-172 | 2.71002234405023e-167 |
70 | 6 | IPC | Interstitial progenitor cell | combined | CENPU | 79682 | 21348 | 0.73 | 0.5 | 0.12 | 1.30259725800838e-98 | 4.38897120113344e-94 |
70 | 6 | IPC | Interstitial progenitor cell | combined | MYH10 | 4628 | 7568 | 0.72 | 0.7 | 0.33 | 7.614377527374e-64 | 2.5655883640734e-59 |
70 | 6 | IPC | Interstitial progenitor cell | combined | C12orf57 | 113246 | 29521 | 0.72 | 0.83 | 0.45 | 2.87366155987684e-68 | 9.68251525984903e-64 |
70 | 6 | IPC | Interstitial progenitor cell | combined | NUCKS1 | 64710 | 29923 | 0.72 | 0.96 | 0.8 | 2.12579060628964e-71 | 7.16263886883231e-67 |
70 | 6 | IPC | Interstitial progenitor cell | combined | AKAP12 | 9590 | 370 | 0.71 | 0.81 | 0.39 | 2.85867157454825e-64 | 9.63200800328288e-60 |
70 | 6 | IPC | Interstitial progenitor cell | combined | KIF23 | 9493 | 6392 | 0.7 | 0.38 | 0.05 | 8.79015200438109e-144 | 2.96175381635616e-139 |
70 | 6 | IPC | Interstitial progenitor cell | combined | SNAI2 | 6591 | 11094 | 0.7 | 0.53 | 0.11 | 1.52447647526295e-109 | 5.13657103575098e-105 |
70 | 6 | IPC | Interstitial progenitor cell | combined | EPB41L2 | 2037 | 3379 | 0.7 | 0.48 | 0.12 | 1.81828082269605e-84 | 6.12651540399208e-80 |
70 | 6 | IPC | Interstitial progenitor cell | combined | COL6A2 | 1292 | 2212 | 0.7 | 0.57 | 0.14 | 6.81592652600837e-106 | 2.29655828367326e-101 |
70 | 6 | IPC | Interstitial progenitor cell | combined | CCNA2 | 890 | 1578 | 0.69 | 0.42 | 0.07 | 5.39107660643939e-117 | 1.81646935177369e-112 |
70 | 6 | IPC | Interstitial progenitor cell | combined | PCNA | 5111 | 8729 | 0.68 | 0.66 | 0.32 | 1.65274045029582e-45 | 5.56874367322674e-41 |
70 | 6 | IPC | Interstitial progenitor cell | combined | TPM4 | 7171 | 12013 | 0.68 | 0.75 | 0.39 | 2.15412486506541e-55 | 7.2581083203514e-51 |
70 | 6 | IPC | Interstitial progenitor cell | combined | PSRC1 | 84722 | 24472 | 0.68 | 0.36 | 0.07 | 5.53657594605188e-91 | 1.86549389926272e-86 |
70 | 6 | IPC | Interstitial progenitor cell | combined | EDNRA | 1909 | 3179 | 0.68 | 0.41 | 0.07 | 3.52891379868458e-100 | 1.18903221532878e-95 |
70 | 6 | IPC | Interstitial progenitor cell | combined | DEPDC1 | 55635 | 22949 | 0.67 | 0.35 | 0.04 | 2.78120297981895e-156 | 9.37098532020197e-152 |