Marker Genes
Dataset: Single-cell transcriptomics reveals gene expression dynamics of human fetal kidney development
- tissue: Kidney
- ontology: Kidney
- genotype: -
- stage: Fetal
- treatment condition: WT
- cell/nucleus: Cells
- pmid: 30789893
- subset name: combined
- total genes: Not reported
- clustering: scran
- pseudotime: Monocle 2
- link: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE114530
Rows:100
| dataset id | cluster id | cluster name | cell type name | sample id | gene symbol | entrez geneid | species specific geneid |
avg log fc (?)
|
pct 1 | pct 2 | p value | padj |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 70 | 6 | IPC | Interstitial progenitor cell | combined | LGALS1 | 3956 | 6561 | 1.79 | 0.96 | 0.23 | 1.4195205116456E-242 | 4.7829324119387E-238 |
| 70 | 6 | IPC | Interstitial progenitor cell | combined | UBE2C | 11065 | 15937 | 1.65 | 0.77 | 0.11 | 2.3175221947787E-282 | 7.8086592830874E-278 |
| 70 | 6 | IPC | Interstitial progenitor cell | combined | PTN | 5764 | 9630 | 1.64 | 0.89 | 0.34 | 5.0406171107866E-151 | 1.6983855293084E-146 |
| 70 | 6 | IPC | Interstitial progenitor cell | combined | PCLAF | 9768 | 28961 | 1.54 | 0.92 | 0.25 | 6.3324872159766E-218 | 2.1336682425512E-213 |
| 70 | 6 | IPC | Interstitial progenitor cell | combined | HMGB2 | 3148 | 5000 | 1.51 | 0.94 | 0.47 | 1.1403138006663E-145 | 3.8421733199649E-141 |
| 70 | 6 | IPC | Interstitial progenitor cell | combined | HIST1H4C | 8364 | 4787 | 1.42 | 0.6 | 0.22 | 3.5944459944295E-80 | 1.2111126333631E-75 |
| 70 | 6 | IPC | Interstitial progenitor cell | combined | TOP2A | 7153 | 11989 | 1.4 | 0.66 | 0.11 | 7.4167191638742E-209 | 2.4989893550758E-204 |
| 70 | 6 | IPC | Interstitial progenitor cell | combined | CENPF | 1063 | 1857 | 1.4 | 0.68 | 0.11 | 9.797643074588E-221 | 3.3012178575517E-216 |
| 70 | 6 | IPC | Interstitial progenitor cell | combined | PTTG1 | 9232 | 9690 | 1.34 | 0.7 | 0.22 | 2.4061335688633E-114 | 8.1072264469279E-110 |
| 70 | 6 | IPC | Interstitial progenitor cell | combined | COL1A1 | 1277 | 2197 | 1.32 | 0.88 | 0.21 | 1.8022806832053E-193 | 6.072604533992E-189 |
| 70 | 6 | IPC | Interstitial progenitor cell | combined | COL1A2 | 1278 | 2198 | 1.28 | 0.86 | 0.19 | 1.9172658165892E-204 | 6.4600354424155E-200 |
| 70 | 6 | IPC | Interstitial progenitor cell | combined | TYMS | 7298 | 12441 | 1.25 | 0.78 | 0.21 | 3.1343172456951E-159 | 1.0560768527645E-154 |
| 70 | 6 | IPC | Interstitial progenitor cell | combined | PCOLCE | 5118 | 8738 | 1.23 | 0.81 | 0.12 | 1.9366182887479E-279 | 6.5252416621073E-275 |
| 70 | 6 | IPC | Interstitial progenitor cell | combined | NUSAP1 | 51203 | 18538 | 1.22 | 0.68 | 0.13 | 9.3239138984724E-185 | 3.1415995489513E-180 |
| 70 | 6 | IPC | Interstitial progenitor cell | combined | CDK1 | 983 | 1722 | 1.22 | 0.65 | 0.1 | 5.1260937102678E-218 | 1.7271860147376E-213 |
| 70 | 6 | IPC | Interstitial progenitor cell | combined | TPM2 | 7169 | 12011 | 1.21 | 0.86 | 0.22 | 7.7682526501287E-182 | 2.6174350479344E-177 |
| 70 | 6 | IPC | Interstitial progenitor cell | combined | MKI67 | 4288 | 7107 | 1.2 | 0.59 | 0.08 | 3.0728147033469E-217 | 1.0353541861457E-212 |
| 70 | 6 | IPC | Interstitial progenitor cell | combined | SMC4 | 10051 | 14013 | 1.19 | 0.79 | 0.24 | 1.2549916661843E-146 | 4.2285689200413E-142 |
| 70 | 6 | IPC | Interstitial progenitor cell | combined | TUBA1B | 10376 | 18809 | 1.17 | 1 | 0.82 | 2.5244774202898E-135 | 8.5059742199243E-131 |
| 70 | 6 | IPC | Interstitial progenitor cell | combined | EMILIN1 | 11117 | 19880 | 1.17 | 0.75 | 0.12 | 1.3245005467024E-234 | 4.4627721420591E-230 |
| 70 | 6 | IPC | Interstitial progenitor cell | combined | COL3A1 | 1281 | 2201 | 1.1 | 0.89 | 0.33 | 3.1436688890679E-114 | 1.0592277954825E-109 |
| 70 | 6 | IPC | Interstitial progenitor cell | combined | TNC | 3371 | 5318 | 1.06 | 0.61 | 0.09 | 1.7768732482205E-208 | 5.9869967225543E-204 |
| 70 | 6 | IPC | Interstitial progenitor cell | combined | BIRC5 | 332 | 593 | 1.05 | 0.62 | 0.11 | 3.0848162038513E-173 | 1.0393979717256E-168 |
| 70 | 6 | IPC | Interstitial progenitor cell | combined | SULT1E1 | 6783 | 11377 | 1.04 | 0.71 | 0.15 | 7.3112662374162E-155 | 2.463458046035E-150 |
| 70 | 6 | IPC | Interstitial progenitor cell | combined | TUBB6 | 84617 | 20776 | 1.02 | 0.68 | 0.14 | 3.7659955818668E-166 | 1.2689145513542E-161 |
| 70 | 6 | IPC | Interstitial progenitor cell | combined | CALD1 | 800 | 1441 | 1.02 | 0.93 | 0.54 | 1.4831547571303E-106 | 4.9973416386747E-102 |
| 70 | 6 | IPC | Interstitial progenitor cell | combined | RARRES2 | 5919 | 9868 | 1.01 | 0.64 | 0.14 | 1.66645404198E-150 | 5.6149502490475E-146 |
| 70 | 6 | IPC | Interstitial progenitor cell | combined | CLDN11 | 5010 | 8514 | 1.01 | 0.56 | 0.11 | 1.0030148890994E-131 | 3.3795583673314E-127 |
| 70 | 6 | IPC | Interstitial progenitor cell | combined | H2AFX | 3014 | 4739 | 0.99 | 0.69 | 0.24 | 1.1866234301358E-98 | 3.9982089854995E-94 |
| 70 | 6 | IPC | Interstitial progenitor cell | combined | H2AFZ | 3015 | 4741 | 0.99 | 0.99 | 0.82 | 2.2629416048366E-116 | 7.6247554433364E-112 |
| 70 | 6 | IPC | Interstitial progenitor cell | combined | ARL6IP1 | 23204 | 697 | 0.98 | 0.79 | 0.61 | 1.9658379541694E-32 | 6.6236944027782E-28 |
| 70 | 6 | IPC | Interstitial progenitor cell | combined | CCNB1 | 891 | 1579 | 0.98 | 0.43 | 0.11 | 6.3161281948239E-75 | 2.128156233964E-70 |
| 70 | 6 | IPC | Interstitial progenitor cell | combined | UBE2S | 27338 | 17895 | 0.97 | 0.65 | 0.3 | 2.291728488466E-59 | 7.7217499690372E-55 |
| 70 | 6 | IPC | Interstitial progenitor cell | combined | RRM2 | 6241 | 10452 | 0.97 | 0.49 | 0.08 | 3.6731373851977E-148 | 1.2376269105685E-143 |
| 70 | 6 | IPC | Interstitial progenitor cell | combined | PRC1 | 9055 | 9341 | 0.95 | 0.54 | 0.09 | 5.2465233060505E-160 | 1.7677635627406E-155 |
| 70 | 6 | IPC | Interstitial progenitor cell | combined | MFAP4 | 4239 | 7035 | 0.95 | 0.72 | 0.15 | 2.1715489354702E-160 | 7.3168169831733E-156 |
| 70 | 6 | IPC | Interstitial progenitor cell | combined | OLFML3 | 56944 | 24956 | 0.94 | 0.67 | 0.11 | 1.2020055557732E-195 | 4.0500375196223E-191 |
| 70 | 6 | IPC | Interstitial progenitor cell | combined | AURKB | 9212 | 11390 | 0.94 | 0.56 | 0.08 | 7.9233439785647E-197 | 2.6696915201376E-192 |
| 70 | 6 | IPC | Interstitial progenitor cell | combined | MAD2L1 | 4085 | 6763 | 0.94 | 0.74 | 0.19 | 1.2637814737038E-139 | 4.2581852974977E-135 |
| 70 | 6 | IPC | Interstitial progenitor cell | combined | CKS1B | 1163 | 19083 | 0.93 | 0.8 | 0.34 | 3.0427457515803E-93 | 1.0252227535375E-88 |
| 70 | 6 | IPC | Interstitial progenitor cell | combined | CTSC | 1075 | 2528 | 0.93 | 0.79 | 0.26 | 4.6963906455642E-119 | 1.5824018641164E-114 |
| 70 | 6 | IPC | Interstitial progenitor cell | combined | CKS2 | 1164 | 2000 | 0.93 | 0.64 | 0.35 | 5.8342521712183E-44 | 1.9657929265703E-39 |
| 70 | 6 | IPC | Interstitial progenitor cell | combined | TK1 | 7083 | 11830 | 0.93 | 0.6 | 0.12 | 7.7840878522047E-152 | 2.6227705609219E-147 |
| 70 | 6 | IPC | Interstitial progenitor cell | combined | FBLN1 | 2192 | 3600 | 0.93 | 0.78 | 0.3 | 8.326969520808E-98 | 2.805689110341E-93 |
| 70 | 6 | IPC | Interstitial progenitor cell | combined | CYP1B1 | 1545 | 2597 | 0.91 | 0.62 | 0.13 | 4.575435522058E-137 | 1.5416472448022E-132 |
| 70 | 6 | IPC | Interstitial progenitor cell | combined | ZWINT | 11130 | 13195 | 0.9 | 0.63 | 0.16 | 5.8122304644012E-119 | 1.9583729326754E-114 |
| 70 | 6 | IPC | Interstitial progenitor cell | combined | UBE2T | 29089 | 25009 | 0.9 | 0.64 | 0.14 | 7.0653373053437E-146 | 2.3805947516625E-141 |
| 70 | 6 | IPC | Interstitial progenitor cell | combined | TUBA1C | 84790 | 20768 | 0.9 | 0.53 | 0.2 | 1.399869053018E-57 | 4.716718787239E-53 |
| 70 | 6 | IPC | Interstitial progenitor cell | combined | MXD3 | 83463 | 14008 | 0.89 | 0.45 | 0.05 | 2.183066865055E-204 | 7.3556254951165E-200 |
| 70 | 6 | IPC | Interstitial progenitor cell | combined | CDC20 | 991 | 1723 | 0.89 | 0.4 | 0.07 | 5.2242553340447E-100 | 1.760260592253E-95 |
| 70 | 6 | IPC | Interstitial progenitor cell | combined | B2M | 567 | 914 | 0.89 | 0.99 | 0.7 | 3.681893692276E-108 | 1.2405772606755E-103 |
| 70 | 6 | IPC | Interstitial progenitor cell | combined | MEG3 | 55384 | 14575 | 0.86 | 0.68 | 0.19 | 6.308509056921E-100 | 2.125589041639E-95 |
| 70 | 6 | IPC | Interstitial progenitor cell | combined | ASPM | 259266 | 19048 | 0.86 | 0.4 | 0.05 | 9.6505366049743E-165 | 3.25165180368E-160 |
| 70 | 6 | IPC | Interstitial progenitor cell | combined | TMSB15A | 11013 | 30744 | 0.86 | 0.8 | 0.27 | 1.2023872760904E-106 | 4.0513236880591E-102 |
| 70 | 6 | IPC | Interstitial progenitor cell | combined | PIMREG | 54478 | 25483 | 0.85 | 0.43 | 0.08 | 4.6229572261332E-115 | 1.5576592077733E-110 |
| 70 | 6 | IPC | Interstitial progenitor cell | combined | HMGN2 | 3151 | 4986 | 0.84 | 0.99 | 0.91 | 3.6678651755226E-112 | 1.2358504922406E-107 |
| 70 | 6 | IPC | Interstitial progenitor cell | combined | COL6A3 | 1293 | 2213 | 0.84 | 0.6 | 0.12 | 8.78379402455E-140 | 2.9596115586319E-135 |
| 70 | 6 | IPC | Interstitial progenitor cell | combined | KPNA2 | 3838 | 6395 | 0.82 | 0.6 | 0.32 | 1.2511527185604E-37 | 4.2156339699174E-33 |
| 70 | 6 | IPC | Interstitial progenitor cell | combined | CENPK | 64105 | 29479 | 0.82 | 0.54 | 0.1 | 2.9448030770002E-152 | 9.9222194876445E-148 |
| 70 | 6 | IPC | Interstitial progenitor cell | combined | TPX2 | 22974 | 1249 | 0.82 | 0.42 | 0.07 | 3.5467032825371E-123 | 1.195026204018E-118 |
| 70 | 6 | IPC | Interstitial progenitor cell | combined | FBLN5 | 10516 | 3602 | 0.82 | 0.49 | 0.08 | 3.8742554728583E-143 | 1.3053916390249E-138 |
| 70 | 6 | IPC | Interstitial progenitor cell | combined | NUF2 | 83540 | 14621 | 0.81 | 0.43 | 0.07 | 2.1312799500719E-131 | 7.1811346637723E-127 |
| 70 | 6 | IPC | Interstitial progenitor cell | combined | EMCN | 51705 | 16041 | 0.81 | 0.57 | 0.08 | 5.4003394610475E-186 | 1.8195903780053E-181 |
| 70 | 6 | IPC | Interstitial progenitor cell | combined | SMC2 | 10592 | 14011 | 0.81 | 0.64 | 0.2 | 3.013174578165E-92 | 1.0152590423669E-87 |
| 70 | 6 | IPC | Interstitial progenitor cell | combined | MOXD1 | 26002 | 21063 | 0.8 | 0.55 | 0.1 | 2.5219982130518E-131 | 8.4976207790568E-127 |
| 70 | 6 | IPC | Interstitial progenitor cell | combined | KIF20B | 9585 | 7212 | 0.8 | 0.49 | 0.12 | 4.367275794634E-93 | 1.471509906244E-88 |
| 70 | 6 | IPC | Interstitial progenitor cell | combined | CDKN3 | 1033 | 1791 | 0.79 | 0.4 | 0.07 | 1.3036935966159E-110 | 4.3926652044378E-106 |
| 70 | 6 | IPC | Interstitial progenitor cell | combined | CCNB2 | 9133 | 1580 | 0.79 | 0.46 | 0.11 | 9.1297293358121E-88 | 3.0761710024085E-83 |
| 70 | 6 | IPC | Interstitial progenitor cell | combined | SERPINH1 | 871 | 1546 | 0.78 | 0.9 | 0.57 | 1.0414560341292E-74 | 3.509081961395E-70 |
| 70 | 6 | IPC | Interstitial progenitor cell | combined | GTSE1 | 51512 | 13698 | 0.77 | 0.44 | 0.07 | 4.7551132765215E-141 | 1.6021878673912E-136 |
| 70 | 6 | IPC | Interstitial progenitor cell | combined | IGF2 | 3481 | 5466 | 0.77 | 0.9 | 0.5 | 5.1067459188833E-60 | 1.7206669699085E-55 |
| 70 | 6 | IPC | Interstitial progenitor cell | combined | MARCKS | 4082 | 6759 | 0.77 | 0.94 | 0.64 | 1.1308552295158E-68 | 3.8103036103306E-64 |
| 70 | 6 | IPC | Interstitial progenitor cell | combined | TUBB | 203068 | 20778 | 0.77 | 0.99 | 0.9 | 4.5606278129355E-92 | 1.5366579352905E-87 |
| 70 | 6 | IPC | Interstitial progenitor cell | combined | CENPE | 1062 | 1856 | 0.76 | 0.37 | 0.04 | 6.07217941645E-163 | 2.0459601325787E-158 |
| 70 | 6 | IPC | Interstitial progenitor cell | combined | CENPA | 1058 | 1851 | 0.76 | 0.31 | 0.04 | 9.5623918358149E-101 | 3.2219523051595E-96 |
| 70 | 6 | IPC | Interstitial progenitor cell | combined | TGFBI | 7045 | 11771 | 0.76 | 0.54 | 0.09 | 1.6197246650146E-149 | 5.4575002863003E-145 |
| 70 | 6 | IPC | Interstitial progenitor cell | combined | CENPW | 387103 | 21488 | 0.76 | 0.63 | 0.19 | 6.0779232333137E-93 | 2.0478954542327E-88 |
| 70 | 6 | IPC | Interstitial progenitor cell | combined | SGO2 | 151246 | 30812 | 0.74 | 0.39 | 0.07 | 2.1213604785129E-107 | 7.1477119963012E-103 |
| 70 | 6 | IPC | Interstitial progenitor cell | combined | KIF20A | 10112 | 9787 | 0.74 | 0.33 | 0.03 | 4.8420531849258E-160 | 1.6314814001289E-155 |
| 70 | 6 | IPC | Interstitial progenitor cell | combined | DUT | 1854 | 3078 | 0.74 | 0.78 | 0.56 | 1.4022261496044E-33 | 4.724660788477E-29 |
| 70 | 6 | IPC | Interstitial progenitor cell | combined | DCN | 1634 | 2705 | 0.73 | 0.49 | 0.15 | 4.0222045273438E-61 | 1.3552415934432E-56 |
| 70 | 6 | IPC | Interstitial progenitor cell | combined | PCDH18 | 54510 | 14268 | 0.73 | 0.5 | 0.11 | 2.0041562318087E-103 | 6.7528040074562E-99 |
| 70 | 6 | IPC | Interstitial progenitor cell | combined | HMGB1 | 3146 | 4983 | 0.73 | 1 | 0.96 | 7.0157424159865E-100 | 2.3638842496425E-95 |
| 70 | 6 | IPC | Interstitial progenitor cell | combined | H2AFV | 94239 | 20664 | 0.73 | 0.83 | 0.47 | 1.5397806646068E-70 | 5.1881369713261E-66 |
| 70 | 6 | IPC | Interstitial progenitor cell | combined | PDGFRA | 5156 | 8803 | 0.73 | 0.52 | 0.07 | 8.043041325014E-172 | 2.7100223440502E-167 |
| 70 | 6 | IPC | Interstitial progenitor cell | combined | CENPU | 79682 | 21348 | 0.73 | 0.5 | 0.12 | 1.3025972580084E-98 | 4.3889712011334E-94 |
| 70 | 6 | IPC | Interstitial progenitor cell | combined | MYH10 | 4628 | 7568 | 0.72 | 0.7 | 0.33 | 7.614377527374E-64 | 2.5655883640734E-59 |
| 70 | 6 | IPC | Interstitial progenitor cell | combined | C12orf57 | 113246 | 29521 | 0.72 | 0.83 | 0.45 | 2.8736615598768E-68 | 9.682515259849E-64 |
| 70 | 6 | IPC | Interstitial progenitor cell | combined | NUCKS1 | 64710 | 29923 | 0.72 | 0.96 | 0.8 | 2.1257906062896E-71 | 7.1626388688323E-67 |
| 70 | 6 | IPC | Interstitial progenitor cell | combined | AKAP12 | 9590 | 370 | 0.71 | 0.81 | 0.39 | 2.8586715745482E-64 | 9.6320080032829E-60 |
| 70 | 6 | IPC | Interstitial progenitor cell | combined | KIF23 | 9493 | 6392 | 0.7 | 0.38 | 0.05 | 8.7901520043811E-144 | 2.9617538163562E-139 |
| 70 | 6 | IPC | Interstitial progenitor cell | combined | SNAI2 | 6591 | 11094 | 0.7 | 0.53 | 0.11 | 1.5244764752629E-109 | 5.136571035751E-105 |
| 70 | 6 | IPC | Interstitial progenitor cell | combined | EPB41L2 | 2037 | 3379 | 0.7 | 0.48 | 0.12 | 1.818280822696E-84 | 6.1265154039921E-80 |
| 70 | 6 | IPC | Interstitial progenitor cell | combined | COL6A2 | 1292 | 2212 | 0.7 | 0.57 | 0.14 | 6.8159265260084E-106 | 2.2965582836733E-101 |
| 70 | 6 | IPC | Interstitial progenitor cell | combined | CCNA2 | 890 | 1578 | 0.69 | 0.42 | 0.07 | 5.3910766064394E-117 | 1.8164693517737E-112 |
| 70 | 6 | IPC | Interstitial progenitor cell | combined | PCNA | 5111 | 8729 | 0.68 | 0.66 | 0.32 | 1.6527404502958E-45 | 5.5687436732267E-41 |
| 70 | 6 | IPC | Interstitial progenitor cell | combined | TPM4 | 7171 | 12013 | 0.68 | 0.75 | 0.39 | 2.1541248650654E-55 | 7.2581083203514E-51 |
| 70 | 6 | IPC | Interstitial progenitor cell | combined | PSRC1 | 84722 | 24472 | 0.68 | 0.36 | 0.07 | 5.5365759460519E-91 | 1.8654938992627E-86 |
| 70 | 6 | IPC | Interstitial progenitor cell | combined | EDNRA | 1909 | 3179 | 0.68 | 0.41 | 0.07 | 3.5289137986846E-100 | 1.1890322153288E-95 |
| 70 | 6 | IPC | Interstitial progenitor cell | combined | DEPDC1 | 55635 | 22949 | 0.67 | 0.35 | 0.04 | 2.7812029798189E-156 | 9.370985320202E-152 |