Marker Genes
Dataset: Single-cell transcriptomics reveals gene expression dynamics of human fetal kidney development
- tissue: Kidney
- ontology: Kidney
- genotype: -
- stage: Fetal
- treatment condition: WT
- cell/nucleus: Cells
- pmid: 30789893
- subset name: combined
- total genes: Not reported
- clustering: scran
- pseudotime: Monocle 2
- link: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE114530
Rows:100
| dataset id | cluster id | cluster name | cell type name | sample id | gene symbol | entrez geneid | species specific geneid |
avg log fc (?)
|
pct 1 | pct 2 | p value | padj |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 70 | 21 | UBCD | Ureteric bud/collecting duct | combined | PHLDA2 | 7262 | 12385 | 2.38 | 0.8 | 0.01 | 0 | 0 |
| 70 | 21 | UBCD | Ureteric bud/collecting duct | combined | WFDC2 | 10406 | 15939 | 2.35 | 0.97 | 0.2 | 0 | 0 |
| 70 | 21 | UBCD | Ureteric bud/collecting duct | combined | AQP2 | 359 | 634 | 2.2 | 0.8 | 0.003 | 0 | 0 |
| 70 | 21 | UBCD | Ureteric bud/collecting duct | combined | SPINK1 | 6690 | 11244 | 2.12 | 0.3 | 0.002 | 0 | 0 |
| 70 | 21 | UBCD | Ureteric bud/collecting duct | combined | CLDN4 | 1364 | 2046 | 2.07 | 0.96 | 0.12 | 0 | 0 |
| 70 | 21 | UBCD | Ureteric bud/collecting duct | combined | CYB5A | 1528 | 2570 | 1.91 | 0.99 | 0.44 | 1.032511903915E-233 | 3.4789456090513E-229 |
| 70 | 21 | UBCD | Ureteric bud/collecting duct | combined | ADH1C | 126 | 251 | 1.91 | 0.78 | 0.009 | 0 | 0 |
| 70 | 21 | UBCD | Ureteric bud/collecting duct | combined | KRT8 | 3856 | 6446 | 1.88 | 0.97 | 0.23 | 0 | 0 |
| 70 | 21 | UBCD | Ureteric bud/collecting duct | combined | S100A6 | 6277 | 10496 | 1.83 | 0.94 | 0.46 | 2.8750370582802E-129 | 9.6871498641693E-125 |
| 70 | 21 | UBCD | Ureteric bud/collecting duct | combined | KRT18 | 3875 | 6430 | 1.79 | 0.97 | 0.33 | 3.6267915088434E-237 | 1.2220111309897E-232 |
| 70 | 21 | UBCD | Ureteric bud/collecting duct | combined | S100A11 | 6282 | 10488 | 1.79 | 0.97 | 0.42 | 4.5266883486677E-219 | 1.5252223722001E-214 |
| 70 | 21 | UBCD | Ureteric bud/collecting duct | combined | SAT1 | 6303 | 10540 | 1.78 | 0.97 | 0.44 | 1.3313199931E-202 | 4.485749584751E-198 |
| 70 | 21 | UBCD | Ureteric bud/collecting duct | combined | KRT19 | 3880 | 6436 | 1.77 | 0.96 | 0.32 | 4.8321154395992E-233 | 1.6281329762186E-228 |
| 70 | 21 | UBCD | Ureteric bud/collecting duct | combined | CLU | 1191 | 2095 | 1.76 | 0.9 | 0.22 | 1.0051994251567E-263 | 3.386918943123E-259 |
| 70 | 21 | UBCD | Ureteric bud/collecting duct | combined | TACSTD2 | 4070 | 11530 | 1.68 | 0.8 | 0.03 | 0 | 0 |
| 70 | 21 | UBCD | Ureteric bud/collecting duct | combined | ATF3 | 467 | 785 | 1.61 | 0.92 | 0.23 | 1.3454197623398E-254 | 4.5332573472277E-250 |
| 70 | 21 | UBCD | Ureteric bud/collecting duct | combined | ELF3 | 1999 | 3318 | 1.54 | 0.89 | 0.17 | 1.6778018456556E-292 | 5.6531855387519E-288 |
| 70 | 21 | UBCD | Ureteric bud/collecting duct | combined | CTSH | 1512 | 2535 | 1.47 | 0.85 | 0.08 | 0 | 0 |
| 70 | 21 | UBCD | Ureteric bud/collecting duct | combined | ELF5 | 2001 | 3320 | 1.47 | 0.77 | 0.003 | 0 | 0 |
| 70 | 21 | UBCD | Ureteric bud/collecting duct | combined | AGR2 | 10551 | 328 | 1.47 | 0.75 | 0.007 | 0 | 0 |
| 70 | 21 | UBCD | Ureteric bud/collecting duct | combined | CAPS | 828 | 1487 | 1.45 | 0.8 | 0.02 | 0 | 0 |
| 70 | 21 | UBCD | Ureteric bud/collecting duct | combined | TMEM176A | 55365 | 24930 | 1.42 | 0.85 | 0.09 | 0 | 0 |
| 70 | 21 | UBCD | Ureteric bud/collecting duct | combined | GSTM3 | 2947 | 4635 | 1.41 | 0.93 | 0.24 | 2.1709402768851E-259 | 7.3147661689365E-255 |
| 70 | 21 | UBCD | Ureteric bud/collecting duct | combined | CLDN3 | 1365 | 2045 | 1.33 | 0.86 | 0.28 | 1.320871979919E-165 | 4.4505460491391E-161 |
| 70 | 21 | UBCD | Ureteric bud/collecting duct | combined | HMGCS2 | 3158 | 5008 | 1.31 | 0.61 | 0.009 | 0 | 0 |
| 70 | 21 | UBCD | Ureteric bud/collecting duct | combined | DHRS2 | 10202 | 18349 | 1.3 | 0.31 | 0.02 | 6.1629091600621E-197 | 2.0765306123913E-192 |
| 70 | 21 | UBCD | Ureteric bud/collecting duct | combined | FXYD3 | 5349 | 4027 | 1.29 | 0.61 | 0.006 | 0 | 0 |
| 70 | 21 | UBCD | Ureteric bud/collecting duct | combined | GATA3 | 2625 | 4172 | 1.29 | 0.73 | 0.03 | 0 | 0 |
| 70 | 21 | UBCD | Ureteric bud/collecting duct | combined | SDF2L1 | 23753 | 10676 | 1.28 | 0.79 | 0.24 | 7.7595624082919E-157 | 2.6145069578499E-152 |
| 70 | 21 | UBCD | Ureteric bud/collecting duct | combined | CALB1 | 793 | 1434 | 1.28 | 0.5 | 0.003 | 0 | 0 |
| 70 | 21 | UBCD | Ureteric bud/collecting duct | combined | TNFRSF12A | 51330 | 18152 | 1.26 | 0.76 | 0.12 | 1.5746091368238E-259 | 5.3054880256142E-255 |
| 70 | 21 | UBCD | Ureteric bud/collecting duct | combined | HPGD | 3248 | 5154 | 1.25 | 0.57 | 0.05 | 0 | 0 |
| 70 | 21 | UBCD | Ureteric bud/collecting duct | combined | MMP7 | 4316 | 7174 | 1.24 | 0.59 | 0.009 | 0 | 0 |
| 70 | 21 | UBCD | Ureteric bud/collecting duct | combined | HERPUD1 | 9709 | 13744 | 1.23 | 0.95 | 0.56 | 2.3869129472817E-127 | 8.0424644845709E-123 |
| 70 | 21 | UBCD | Ureteric bud/collecting duct | combined | ADIRF | 10974 | 24043 | 1.2 | 0.21 | 0.01 | 3.4109592308662E-223 | 1.1492886032481E-218 |
| 70 | 21 | UBCD | Ureteric bud/collecting duct | combined | TMEM176B | 28959 | 29596 | 1.18 | 0.8 | 0.09 | 0 | 0 |
| 70 | 21 | UBCD | Ureteric bud/collecting duct | combined | KLF6 | 1316 | 2235 | 1.17 | 0.92 | 0.43 | 1.2911310884004E-136 | 4.3503370892562E-132 |
| 70 | 21 | UBCD | Ureteric bud/collecting duct | combined | SCIN | 85477 | 21695 | 1.15 | 0.73 | 0.04 | 0 | 0 |
| 70 | 21 | UBCD | Ureteric bud/collecting duct | combined | BTG2 | 7832 | 1131 | 1.13 | 0.92 | 0.35 | 1.9276496915205E-148 | 6.4950228706091E-144 |
| 70 | 21 | UBCD | Ureteric bud/collecting duct | combined | CD9 | 928 | 1709 | 1.13 | 0.89 | 0.35 | 6.3687128263211E-138 | 2.1458740997006E-133 |
| 70 | 21 | UBCD | Ureteric bud/collecting duct | combined | AOC1 | 26 | 80 | 1.09 | 0.62 | 0.004 | 0 | 0 |
| 70 | 21 | UBCD | Ureteric bud/collecting duct | combined | GDF15 | 9518 | 30142 | 1.07 | 0.43 | 0.01 | 0 | 0 |
| 70 | 21 | UBCD | Ureteric bud/collecting duct | combined | KRT7 | 3855 | 6445 | 1.07 | 0.3 | 0.002 | 0 | 0 |
| 70 | 21 | UBCD | Ureteric bud/collecting duct | combined | SNCG | 6623 | 11141 | 1.05 | 0.22 | 0.01 | 5.2019095343903E-216 | 1.7527313985175E-211 |
| 70 | 21 | UBCD | Ureteric bud/collecting duct | combined | AHI1 | 54806 | 21575 | 1.05 | 0.76 | 0.13 | 1.2034668769451E-252 | 4.0549612951788E-248 |
| 70 | 21 | UBCD | Ureteric bud/collecting duct | combined | S100A10 | 6281 | 10487 | 1.04 | 0.92 | 0.29 | 1.5669401671496E-159 | 5.2796481991937E-155 |
| 70 | 21 | UBCD | Ureteric bud/collecting duct | combined | LMNA | 4000 | 6636 | 1.04 | 0.93 | 0.44 | 1.7080964048934E-129 | 5.7552600266478E-125 |
| 70 | 21 | UBCD | Ureteric bud/collecting duct | combined | MAL | 4118 | 6817 | 1.03 | 0.68 | 0.1 | 3.5309193579953E-234 | 1.1897079684829E-229 |
| 70 | 21 | UBCD | Ureteric bud/collecting duct | combined | GATA2 | 2624 | 4171 | 1.02 | 0.57 | 0.03 | 0 | 0 |
| 70 | 21 | UBCD | Ureteric bud/collecting duct | combined | STC1 | 6781 | 11373 | 1.01 | 0.53 | 0.03 | 0 | 0 |
| 70 | 21 | UBCD | Ureteric bud/collecting duct | combined | MAFF | 23764 | 6780 | 1 | 0.79 | 0.21 | 1.3847841397856E-157 | 4.6658916805936E-153 |
| 70 | 21 | UBCD | Ureteric bud/collecting duct | combined | TSPAN1 | 10103 | 20657 | 1 | 0.63 | 0.01 | 0 | 0 |
| 70 | 21 | UBCD | Ureteric bud/collecting duct | combined | LOC102724889 | 102724889 | NULL | 0.99 | 0.58 | 0.04 | 0 | 0 |
| 70 | 21 | UBCD | Ureteric bud/collecting duct | combined | CYSTM1 | 84418 | 30239 | 0.99 | 0.87 | 0.28 | 5.0099489322618E-158 | 1.6880521932363E-153 |
| 70 | 21 | UBCD | Ureteric bud/collecting duct | combined | ZNF44 | 51710 | 13110 | 0.98 | 0.71 | 0.08 | 0 | 0 |
| 70 | 21 | UBCD | Ureteric bud/collecting duct | combined | ND3 | 4537 | 7458 | 0.96 | 0.99 | 0.77 | 5.732573373124E-130 | 1.9315332723404E-125 |
| 70 | 21 | UBCD | Ureteric bud/collecting duct | combined | PTGER1 | 5731 | 9593 | 0.94 | 0.49 | 0.006 | 0 | 0 |
| 70 | 21 | UBCD | Ureteric bud/collecting duct | combined | SMIM22 | 440335 | 48329 | 0.93 | 0.59 | 0.003 | 0 | 0 |
| 70 | 21 | UBCD | Ureteric bud/collecting duct | combined | C9orf16 | 79095 | 17823 | 0.92 | 0.89 | 0.43 | 5.1312394043685E-98 | 1.7289198049079E-93 |
| 70 | 21 | UBCD | Ureteric bud/collecting duct | combined | JUND | 3727 | 6206 | 0.92 | 0.76 | 0.17 | 1.9243723774001E-172 | 6.4839802884119E-168 |
| 70 | 21 | UBCD | Ureteric bud/collecting duct | combined | GMNN | 51053 | 17493 | 0.92 | 0.77 | 0.23 | 2.4634130600211E-129 | 8.300223964435E-125 |
| 70 | 21 | UBCD | Ureteric bud/collecting duct | combined | UQCRQ | 27089 | 29594 | 0.92 | 0.95 | 0.64 | 2.7912766973985E-97 | 9.4049277042144E-93 |
| 70 | 21 | UBCD | Ureteric bud/collecting duct | combined | BLVRB | 645 | 1063 | 0.89 | 0.74 | 0.13 | 4.5694835471912E-223 | 1.5396417863906E-218 |
| 70 | 21 | UBCD | Ureteric bud/collecting duct | combined | PRPS2 | 5634 | 9465 | 0.89 | 0.58 | 0.08 | 6.0396812195422E-212 | 2.0350101901126E-207 |
| 70 | 21 | UBCD | Ureteric bud/collecting duct | combined | TSPO | 706 | 1158 | 0.88 | 0.75 | 0.15 | 1.4181345211388E-196 | 4.778262455525E-192 |
| 70 | 21 | UBCD | Ureteric bud/collecting duct | combined | S100A14 | 57402 | 18901 | 0.86 | 0.57 | 0.02 | 0 | 0 |
| 70 | 21 | UBCD | Ureteric bud/collecting duct | combined | CAPG | 822 | 1474 | 0.86 | 0.71 | 0.09 | 1.7143660279474E-297 | 5.7763848945659E-293 |
| 70 | 21 | UBCD | Ureteric bud/collecting duct | combined | COX1 | 4512 | 7419 | 0.86 | 1 | 0.99 | 1.5999729879632E-168 | 5.3909489856434E-164 |
| 70 | 21 | UBCD | Ureteric bud/collecting duct | combined | MAL2 | 114569 | 13634 | 0.85 | 0.79 | 0.18 | 2.2072509596441E-178 | 7.4371113834248E-174 |
| 70 | 21 | UBCD | Ureteric bud/collecting duct | combined | CREM | 1390 | 2352 | 0.85 | 0.68 | 0.23 | 7.0905027895271E-95 | 2.3890740099033E-90 |
| 70 | 21 | UBCD | Ureteric bud/collecting duct | combined | SELENOK | 58515 | 30394 | 0.85 | 0.95 | 0.59 | 7.8693955856366E-100 | 2.6515141486244E-95 |
| 70 | 21 | UBCD | Ureteric bud/collecting duct | combined | DBI | 1622 | 2690 | 0.84 | 0.92 | 0.45 | 2.1852722512401E-105 | 7.3630563233285E-101 |
| 70 | 21 | UBCD | Ureteric bud/collecting duct | combined | S100A4 | 6275 | 10494 | 0.84 | 0.46 | 0.1 | 2.172289040431E-92 | 7.3193106928282E-88 |
| 70 | 21 | UBCD | Ureteric bud/collecting duct | combined | ENSG00000262920 | NULL | 0.84 | 0.47 | 0.02 | 0 | 0 | |
| 70 | 21 | UBCD | Ureteric bud/collecting duct | combined | PRKCA | 5578 | 9393 | 0.84 | 0.6 | 0.07 | 1.3197319092522E-257 | 4.4467046950343E-253 |
| 70 | 21 | UBCD | Ureteric bud/collecting duct | combined | KLF4 | 9314 | 6348 | 0.83 | 0.76 | 0.22 | 6.261220425995E-124 | 2.1096556103348E-119 |
| 70 | 21 | UBCD | Ureteric bud/collecting duct | combined | CLDN7 | 1366 | 2049 | 0.82 | 0.72 | 0.12 | 1.5425477714399E-214 | 5.1974604610895E-210 |
| 70 | 21 | UBCD | Ureteric bud/collecting duct | combined | CDK2AP2 | 10263 | 30833 | 0.82 | 0.7 | 0.22 | 4.9404421740967E-101 | 1.6646325861401E-96 |
| 70 | 21 | UBCD | Ureteric bud/collecting duct | combined | KLF5 | 688 | 6349 | 0.81 | 0.62 | 0.07 | 4.586859407739E-281 | 1.5454964088436E-276 |
| 70 | 21 | UBCD | Ureteric bud/collecting duct | combined | RDH10 | 157506 | 19975 | 0.8 | 0.61 | 0.09 | 1.2407989881258E-204 | 4.1807481105911E-200 |
| 70 | 21 | UBCD | Ureteric bud/collecting duct | combined | RALBP1 | 10928 | 9841 | 0.8 | 0.78 | 0.3 | 8.9712268554955E-98 | 3.0227651766906E-93 |
| 70 | 21 | UBCD | Ureteric bud/collecting duct | combined | S100P | 6286 | 10504 | 0.8 | 0.16 | 0.001 | 0 | 0 |
| 70 | 21 | UBCD | Ureteric bud/collecting duct | combined | CYTOR | 112597 | 28717 | 0.79 | 0.4 | 0.02 | 0 | 0 |
| 70 | 21 | UBCD | Ureteric bud/collecting duct | combined | NEAT1 | 283131 | 30815 | 0.78 | 0.86 | 0.47 | 3.7131175795059E-64 | 1.2510978372387E-59 |
| 70 | 21 | UBCD | Ureteric bud/collecting duct | combined | DMKN | 93099 | 25063 | 0.78 | 0.73 | 0.16 | 9.9801365267346E-166 | 3.362707201318E-161 |
| 70 | 21 | UBCD | Ureteric bud/collecting duct | combined | PLP2 | 5355 | 9087 | 0.77 | 0.64 | 0.08 | 1.0103583578784E-252 | 3.4043014510354E-248 |
| 70 | 21 | UBCD | Ureteric bud/collecting duct | combined | FOSB | 2354 | 3797 | 0.76 | 0.85 | 0.33 | 3.5151848666932E-94 | 1.1844063889836E-89 |
| 70 | 21 | UBCD | Ureteric bud/collecting duct | combined | FAM3B | 54097 | 1253 | 0.76 | 0.5 | 0.01 | 0 | 0 |
| 70 | 21 | UBCD | Ureteric bud/collecting duct | combined | PTP4A2 | 8073 | 9635 | 0.75 | 0.84 | 0.37 | 8.5357543727625E-94 | 2.8760370783586E-89 |
| 70 | 21 | UBCD | Ureteric bud/collecting duct | combined | KRT17 | 3872 | 6427 | 0.74 | 0.22 | 0.007 | 1.4004222273407E-304 | 4.7185826528016E-300 |
| 70 | 21 | UBCD | Ureteric bud/collecting duct | combined | PERP | 64065 | 17637 | 0.74 | 0.61 | 0.1 | 1.6470383545722E-191 | 5.5495310318956E-187 |
| 70 | 21 | UBCD | Ureteric bud/collecting duct | combined | FXYD5 | 53827 | 4029 | 0.74 | 0.52 | 0.03 | 0 | 0 |
| 70 | 21 | UBCD | Ureteric bud/collecting duct | combined | GPR160 | 26996 | 23693 | 0.73 | 0.52 | 0.02 | 0 | 0 |
| 70 | 21 | UBCD | Ureteric bud/collecting duct | combined | HSPB1 | 3315 | 5246 | 0.73 | 0.93 | 0.56 | 9.7965587112419E-76 | 3.3008524921658E-71 |
| 70 | 21 | UBCD | Ureteric bud/collecting duct | combined | RPL28 | 6158 | 10330 | 0.73 | 0.99 | 0.92 | 9.1928064803674E-112 | 3.097424215495E-107 |
| 70 | 21 | UBCD | Ureteric bud/collecting duct | combined | DNAJB1 | 3337 | 5270 | 0.73 | 0.87 | 0.42 | 1.8397174410671E-73 | 6.1987439459317E-69 |
| 70 | 21 | UBCD | Ureteric bud/collecting duct | combined | CSTB | 1476 | 2482 | 0.72 | 0.95 | 0.63 | 1.4362126635496E-82 | 4.8391749485639E-78 |
| 70 | 21 | UBCD | Ureteric bud/collecting duct | combined | COX17 | 10063 | 2264 | 0.72 | 0.73 | 0.23 | 1.6268629973547E-105 | 5.4815521832868E-101 |
| 70 | 21 | UBCD | Ureteric bud/collecting duct | combined | PIM3 | 415116 | 19310 | 0.71 | 0.6 | 0.15 | 1.1502524115157E-111 | 3.8756604753611E-107 |
| 70 | 21 | UBCD | Ureteric bud/collecting duct | combined | LRRFIP1 | 9208 | 6702 | 0.7 | 0.8 | 0.3 | 8.3226196318281E-93 | 2.8042234587482E-88 |