Marker Genes
Dataset: Single-cell transcriptomics reveals gene expression dynamics of human fetal kidney development
- tissue: Kidney
- ontology: Kidney
- genotype: -
- stage: Fetal
- treatment condition: WT
- cell/nucleus: Cells
- pmid: 30789893
- subset name: combined
- total genes: Not reported
- clustering: scran
- pseudotime: Monocle 2
- link: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE114530
Rows:100
dataset id | cluster id | cluster name | cell type name | sample id | gene symbol | entrez geneid | species specific geneid |
avg log fc (?)
|
pct 1 | pct 2 | p value | padj |
---|---|---|---|---|---|---|---|---|---|---|---|---|
70 | 2 | End | Endothelial cells | combined | PLVAP | 83483 | 13635 | 2.54 | 0.9 | 0.06 | 0 | 0 |
70 | 2 | End | Endothelial cells | combined | RAMP2 | 10266 | 9844 | 2.47 | 0.92 | 0.08 | 0 | 0 |
70 | 2 | End | Endothelial cells | combined | IGFBP5 | 3488 | 5474 | 2.46 | 0.85 | 0.13 | 0 | 0 |
70 | 2 | End | Endothelial cells | combined | RNASE1 | 6035 | 10044 | 2.27 | 0.8 | 0.005 | 0 | 0 |
70 | 2 | End | Endothelial cells | combined | EGFL7 | 51162 | 20594 | 2.16 | 0.89 | 0.12 | 0 | 0 |
70 | 2 | End | Endothelial cells | combined | CD74 | 972 | 1697 | 2.12 | 0.82 | 0.16 | 1.01833063802786e-291 | 3.43116325177107e-287 |
70 | 2 | End | Endothelial cells | combined | TM4SF1 | 4071 | 11853 | 2.05 | 0.79 | 0.03 | 0 | 0 |
70 | 2 | End | Endothelial cells | combined | GNG11 | 2791 | 4403 | 1.98 | 0.94 | 0.21 | 0 | 0 |
70 | 2 | End | Endothelial cells | combined | B2M | 567 | 914 | 1.87 | 1 | 0.7 | 1.4161307724295e-193 | 4.77151102462396e-189 |
70 | 2 | End | Endothelial cells | combined | PRCP | 5547 | 9344 | 1.8 | 0.89 | 0.25 | 1.44517779871015e-239 | 4.86938207497397e-235 |
70 | 2 | End | Endothelial cells | combined | CAVIN2 | 8436 | 10690 | 1.72 | 0.75 | 0.03 | 0 | 0 |
70 | 2 | End | Endothelial cells | combined | APLNR | 187 | 339 | 1.69 | 0.73 | 0.003 | 0 | 0 |
70 | 2 | End | Endothelial cells | combined | TMEM88 | 92162 | 32371 | 1.69 | 0.72 | 0.02 | 0 | 0 |
70 | 2 | End | Endothelial cells | combined | HLA-E | 3133 | 4962 | 1.69 | 0.83 | 0.17 | 1.84594449001292e-266 | 6.21972536464955e-262 |
70 | 2 | End | Endothelial cells | combined | ICAM2 | 3384 | 5345 | 1.66 | 0.72 | 0.006 | 0 | 0 |
70 | 2 | End | Endothelial cells | combined | HLA-B | 3106 | 4932 | 1.65 | 0.79 | 0.12 | 0 | 0 |
70 | 2 | End | Endothelial cells | combined | ESAM | 90952 | 17474 | 1.61 | 0.75 | 0.05 | 0 | 0 |
70 | 2 | End | Endothelial cells | combined | HSPB1 | 3315 | 5246 | 1.6 | 0.96 | 0.56 | 1.31776842123934e-157 | 4.44008891852385e-153 |
70 | 2 | End | Endothelial cells | combined | HLA-DRA | 3122 | 4947 | 1.57 | 0.57 | 0.01 | 0 | 0 |
70 | 2 | End | Endothelial cells | combined | CD34 | 947 | 1662 | 1.55 | 0.68 | 0.007 | 0 | 0 |
70 | 2 | End | Endothelial cells | combined | EMCN | 51705 | 16041 | 1.52 | 0.73 | 0.08 | 0 | 0 |
70 | 2 | End | Endothelial cells | combined | HSPG2 | 3339 | 5273 | 1.51 | 0.67 | 0.08 | 0 | 0 |
70 | 2 | End | Endothelial cells | combined | ECSCR | 641700 | 35454 | 1.49 | 0.64 | 0.004 | 0 | 0 |
70 | 2 | End | Endothelial cells | combined | VAMP5 | 10791 | 12646 | 1.49 | 0.85 | 0.25 | 1.76560984291749e-190 | 5.94904580472618e-186 |
70 | 2 | End | Endothelial cells | combined | GMFG | 9535 | 4374 | 1.48 | 0.66 | 0.01 | 0 | 0 |
70 | 2 | End | Endothelial cells | combined | RBP5 | 83758 | 15847 | 1.47 | 0.63 | 0.01 | 0 | 0 |
70 | 2 | End | Endothelial cells | combined | TCIM | 56892 | 1357 | 1.45 | 0.66 | 0.14 | 2.79345057086721e-176 | 9.41225235347996e-172 |
70 | 2 | End | Endothelial cells | combined | CCDC85B | 11007 | 24926 | 1.45 | 0.8 | 0.19 | 1.80467078371484e-230 | 6.08065773864879e-226 |
70 | 2 | End | Endothelial cells | combined | HLA-DRB1 | 3123 | 4948 | 1.43 | 0.6 | 0.03 | 0 | 0 |
70 | 2 | End | Endothelial cells | combined | HLA-C | 3107 | 4933 | 1.42 | 0.74 | 0.17 | 2.83835491785845e-196 | 9.56355306023225e-192 |
70 | 2 | End | Endothelial cells | combined | ITM2A | 9452 | 6173 | 1.42 | 0.7 | 0.06 | 0 | 0 |
70 | 2 | End | Endothelial cells | combined | SLC2A3 | 6515 | 11007 | 1.42 | 0.57 | 0.09 | 1.33771800633093e-197 | 4.50730705053144e-193 |
70 | 2 | End | Endothelial cells | combined | S100A10 | 6281 | 10487 | 1.41 | 0.86 | 0.29 | 2.16831303782578e-168 | 7.30591394965019e-164 |
70 | 2 | End | Endothelial cells | combined | CCL2 | 6347 | 10618 | 1.41 | 0.41 | 0.03 | 6.03326747693963e-236 | 2.03284914368004e-231 |
70 | 2 | End | Endothelial cells | combined | FN1 | 2335 | 3778 | 1.4 | 0.68 | 0.11 | 7.71693331953e-243 | 2.60014351268244e-238 |
70 | 2 | End | Endothelial cells | combined | MEF2C | 4208 | 6996 | 1.39 | 0.66 | 0.03 | 0 | 0 |
70 | 2 | End | Endothelial cells | combined | S100A16 | 140576 | 20441 | 1.34 | 0.81 | 0.29 | 5.07296752676273e-151 | 1.70928567846744e-146 |
70 | 2 | End | Endothelial cells | combined | THY1 | 7070 | 11801 | 1.33 | 0.64 | 0.09 | 6.92527731619027e-248 | 2.33340293891715e-243 |
70 | 2 | End | Endothelial cells | combined | PECAM1 | 5175 | 8823 | 1.32 | 0.6 | 0.003 | 0 | 0 |
70 | 2 | End | Endothelial cells | combined | COTL1 | 23406 | 18304 | 1.32 | 0.83 | 0.38 | 5.22209336884535e-121 | 1.75953213969875e-116 |
70 | 2 | End | Endothelial cells | combined | A2M | 2 | 7 | 1.31 | 0.62 | 0.02 | 0 | 0 |
70 | 2 | End | Endothelial cells | combined | TM4SF18 | 116441 | 25181 | 1.31 | 0.58 | 0.003 | 0 | 0 |
70 | 2 | End | Endothelial cells | combined | RHOC | 389 | 669 | 1.3 | 0.86 | 0.35 | 6.71156765129766e-154 | 2.26139560442823e-149 |
70 | 2 | End | Endothelial cells | combined | ENG | 2022 | 3349 | 1.28 | 0.55 | 0.03 | 0 | 0 |
70 | 2 | End | Endothelial cells | combined | LGALS1 | 3956 | 6561 | 1.26 | 0.79 | 0.23 | 1.33790457308551e-127 | 4.50793566855431e-123 |
70 | 2 | End | Endothelial cells | combined | NRP2 | 8828 | 8005 | 1.25 | 0.68 | 0.16 | 9.95339918917067e-165 | 3.35369832279916e-160 |
70 | 2 | End | Endothelial cells | combined | KANK3 | 256949 | 24796 | 1.25 | 0.59 | 0.007 | 0 | 0 |
70 | 2 | End | Endothelial cells | combined | CDH5 | 1003 | 1764 | 1.25 | 0.59 | 0.003 | 0 | 0 |
70 | 2 | End | Endothelial cells | combined | TMSB10 | 9168 | 11879 | 1.25 | 0.99 | 0.94 | 9.3996742858719e-157 | 3.16712625388168e-152 |
70 | 2 | End | Endothelial cells | combined | FAM167B | 84734 | 28133 | 1.25 | 0.49 | 0.004 | 0 | 0 |
70 | 2 | End | Endothelial cells | combined | PLPP3 | 8613 | 9229 | 1.25 | 0.76 | 0.23 | 3.55085198473374e-144 | 1.19642406773619e-139 |
70 | 2 | End | Endothelial cells | combined | CRHBP | 1393 | 2356 | 1.21 | 0.43 | 0.003 | 0 | 0 |
70 | 2 | End | Endothelial cells | combined | CRIP2 | 1397 | 2361 | 1.2 | 0.81 | 0.36 | 1.31122899225367e-112 | 4.41805496649951e-108 |
70 | 2 | End | Endothelial cells | combined | GYPC | 2995 | 4704 | 1.19 | 0.74 | 0.25 | 4.83822535416867e-135 | 1.63019165083359e-130 |
70 | 2 | End | Endothelial cells | combined | IL32 | 9235 | 16830 | 1.17 | 0.32 | 0.01 | 0 | 0 |
70 | 2 | End | Endothelial cells | combined | NPDC1 | 56654 | 7899 | 1.15 | 0.63 | 0.13 | 8.99318306501176e-176 | 3.03016310192506e-171 |
70 | 2 | End | Endothelial cells | combined | GIMAP7 | 168537 | 22404 | 1.12 | 0.48 | 0.002 | 0 | 0 |
70 | 2 | End | Endothelial cells | combined | SPTBN1 | 6711 | 11275 | 1.11 | 0.68 | 0.21 | 1.33285701114653e-121 | 4.49092841335712e-117 |
70 | 2 | End | Endothelial cells | combined | HLA-A | 3105 | 4931 | 1.09 | 0.87 | 0.42 | 3.07460221909294e-112 | 1.03595647170117e-107 |
70 | 2 | End | Endothelial cells | combined | CLEC14A | 161198 | 19832 | 1.09 | 0.43 | 0.005 | 0 | 0 |
70 | 2 | End | Endothelial cells | combined | KLF2 | 10365 | 6347 | 1.08 | 0.52 | 0.06 | 6.70664982570086e-235 | 2.25973859227165e-230 |
70 | 2 | End | Endothelial cells | combined | PCAT19 | 100505495 | 49593 | 1.07 | 0.51 | 0.002 | 0 | 0 |
70 | 2 | End | Endothelial cells | combined | TIE1 | 7075 | 11809 | 1.06 | 0.5 | 0.003 | 0 | 0 |
70 | 2 | End | Endothelial cells | combined | RAMP3 | 10268 | 9845 | 1.05 | 0.38 | 0.006 | 0 | 0 |
70 | 2 | End | Endothelial cells | combined | HLA-DRB5 | 3127 | 4953 | 1.04 | 0.4 | 0.01 | 0 | 0 |
70 | 2 | End | Endothelial cells | combined | CAVIN1 | 284119 | 9688 | 1.04 | 0.54 | 0.07 | 8.80225229820087e-219 | 2.9658308893558e-214 |
70 | 2 | End | Endothelial cells | combined | CCL21 | 6366 | 10620 | 1.03 | 0.44 | 0.002 | 0 | 0 |
70 | 2 | End | Endothelial cells | combined | CALM1 | 801 | 1442 | 1.03 | 0.91 | 0.61 | 9.1336098259576e-98 | 3.07747849475815e-93 |
70 | 2 | End | Endothelial cells | combined | FKBP1A | 2280 | 3711 | 1.02 | 0.95 | 0.7 | 1.35742254423163e-107 | 4.57369952053406e-103 |
70 | 2 | End | Endothelial cells | combined | FXYD6 | 53826 | 4030 | 1 | 0.73 | 0.3 | 2.36360555123178e-98 | 7.96393254432034e-94 |
70 | 2 | End | Endothelial cells | combined | GIMAP4 | 55303 | 21872 | 1 | 0.4 | 0.002 | 0 | 0 |
70 | 2 | End | Endothelial cells | combined | FCGRT | 2217 | 3621 | 1 | 0.76 | 0.33 | 2.66015454658695e-93 | 8.96312472927008e-89 |
70 | 2 | End | Endothelial cells | combined | NOSTRIN | 115677 | 20203 | 0.99 | 0.46 | 0.006 | 0 | 0 |
70 | 2 | End | Endothelial cells | combined | FLT1 | 2321 | 3763 | 0.99 | 0.41 | 0.006 | 0 | 0 |
70 | 2 | End | Endothelial cells | combined | MARCKS | 4082 | 6759 | 0.98 | 0.89 | 0.64 | 3.31773747187551e-82 | 1.11787846377373e-77 |
70 | 2 | End | Endothelial cells | combined | LMO2 | 4005 | 6642 | 0.98 | 0.47 | 0.02 | 0 | 0 |
70 | 2 | End | Endothelial cells | combined | PCDH17 | 27253 | 14267 | 0.98 | 0.5 | 0.07 | 8.5685185831587e-180 | 2.88707665140949e-175 |
70 | 2 | End | Endothelial cells | combined | IFITM3 | 10410 | 5414 | 0.98 | 0.93 | 0.68 | 1.21791987023763e-97 | 4.10365921077868e-93 |
70 | 2 | End | Endothelial cells | combined | TFPI | 7035 | 11760 | 0.97 | 0.42 | 0.04 | 4.61934826613231e-212 | 1.55644320479062e-207 |
70 | 2 | End | Endothelial cells | combined | ADGRL4 | 64123 | 20822 | 0.96 | 0.38 | 0.002 | 0 | 0 |
70 | 2 | End | Endothelial cells | combined | SH3BP5 | 9467 | 10827 | 0.95 | 0.59 | 0.17 | 2.89935207278172e-105 | 9.76907687403073e-101 |
70 | 2 | End | Endothelial cells | combined | ARHGDIB | 397 | 679 | 0.94 | 0.49 | 0.04 | 0 | 0 |
70 | 2 | End | Endothelial cells | combined | LDB2 | 9079 | 6533 | 0.94 | 0.5 | 0.07 | 5.04206614521232e-176 | 1.69887376696784e-171 |
70 | 2 | End | Endothelial cells | combined | MSN | 4478 | 7373 | 0.94 | 0.58 | 0.18 | 1.12560927854761e-96 | 3.79262790313833e-92 |
70 | 2 | End | Endothelial cells | combined | ARHGAP29 | 9411 | 30207 | 0.93 | 0.7 | 0.28 | 1.04059803362861e-85 | 3.50619101450825e-81 |
70 | 2 | End | Endothelial cells | combined | MYL12A | 10627 | 16701 | 0.93 | 0.96 | 0.73 | 2.22247706755352e-102 | 7.48841423141483e-98 |
70 | 2 | End | Endothelial cells | combined | NTS | 4922 | 8038 | 0.92 | 0.19 | 0.005 | 1.06402372504097e-286 | 3.58512153915305e-282 |
70 | 2 | End | Endothelial cells | combined | GUK1 | 2987 | 4693 | 0.92 | 0.86 | 0.54 | 1.45462334443649e-89 | 4.90120789674432e-85 |
70 | 2 | End | Endothelial cells | combined | CD93 | 22918 | 15855 | 0.92 | 0.39 | 0.002 | 0 | 0 |
70 | 2 | End | Endothelial cells | combined | ELK3 | 2004 | 3325 | 0.91 | 0.47 | 0.03 | 0 | 0 |
70 | 2 | End | Endothelial cells | combined | KDR | 3791 | 6307 | 0.91 | 0.39 | 0.002 | 0 | 0 |
70 | 2 | End | Endothelial cells | combined | PLXND1 | 23129 | 9107 | 0.9 | 0.45 | 0.04 | 3.50341800562033e-237 | 1.18044166281372e-232 |
70 | 2 | End | Endothelial cells | combined | LYL1 | 4066 | 6734 | 0.89 | 0.44 | 0.005 | 0 | 0 |
70 | 2 | End | Endothelial cells | combined | CAVIN3 | 112464 | 9400 | 0.89 | 0.47 | 0.08 | 1.71610724213162e-128 | 5.78225174163828e-124 |
70 | 2 | End | Endothelial cells | combined | PLAT | 5327 | 9051 | 0.89 | 0.45 | 0.14 | 2.94645637156497e-54 | 9.92779009835101e-50 |
70 | 2 | End | Endothelial cells | combined | TSPO | 706 | 1158 | 0.89 | 0.58 | 0.15 | 1.29402682014923e-108 | 4.36009396781082e-104 |
70 | 2 | End | Endothelial cells | combined | TMEM204 | 79652 | 14158 | 0.89 | 0.43 | 0.03 | 0 | 0 |
70 | 2 | End | Endothelial cells | combined | LINC00305 | 221241 | 28597 | 0.88 | 0.3 | 0.002 | 0 | 0 |
70 | 2 | End | Endothelial cells | combined | ISG15 | 9636 | 4053 | 0.88 | 0.52 | 0.07 | 1.09979252847438e-207 | 3.70564094544156e-203 |
70 | 2 | End | Endothelial cells | combined | DNASE1L3 | 1776 | 2959 | 0.87 | 0.22 | 0.001 | 0 | 0 |