Marker Genes
Dataset: Single-cell transcriptomics reveals gene expression dynamics of human fetal kidney development
- tissue: Kidney
- ontology: Kidney
- genotype: -
- stage: Fetal
- treatment condition: WT
- cell/nucleus: Cells
- pmid: 30789893
- subset name: combined
- total genes: Not reported
- clustering: scran
- pseudotime: Monocle 2
- link: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE114530
Rows:100
| dataset id | cluster id | cluster name | cell type name | sample id | gene symbol | entrez geneid | species specific geneid |
avg log fc (?)
|
pct 1 | pct 2 | p value | padj |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 70 | 2 | End | Endothelial cells | combined | PLVAP | 83483 | 13635 | 2.54 | 0.9 | 0.06 | 0 | 0 |
| 70 | 2 | End | Endothelial cells | combined | RAMP2 | 10266 | 9844 | 2.47 | 0.92 | 0.08 | 0 | 0 |
| 70 | 2 | End | Endothelial cells | combined | IGFBP5 | 3488 | 5474 | 2.46 | 0.85 | 0.13 | 0 | 0 |
| 70 | 2 | End | Endothelial cells | combined | RNASE1 | 6035 | 10044 | 2.27 | 0.8 | 0.005 | 0 | 0 |
| 70 | 2 | End | Endothelial cells | combined | EGFL7 | 51162 | 20594 | 2.16 | 0.89 | 0.12 | 0 | 0 |
| 70 | 2 | End | Endothelial cells | combined | CD74 | 972 | 1697 | 2.12 | 0.82 | 0.16 | 1.0183306380279E-291 | 3.4311632517711E-287 |
| 70 | 2 | End | Endothelial cells | combined | TM4SF1 | 4071 | 11853 | 2.05 | 0.79 | 0.03 | 0 | 0 |
| 70 | 2 | End | Endothelial cells | combined | GNG11 | 2791 | 4403 | 1.98 | 0.94 | 0.21 | 0 | 0 |
| 70 | 2 | End | Endothelial cells | combined | B2M | 567 | 914 | 1.87 | 1 | 0.7 | 1.4161307724295E-193 | 4.771511024624E-189 |
| 70 | 2 | End | Endothelial cells | combined | PRCP | 5547 | 9344 | 1.8 | 0.89 | 0.25 | 1.4451777987101E-239 | 4.869382074974E-235 |
| 70 | 2 | End | Endothelial cells | combined | CAVIN2 | 8436 | 10690 | 1.72 | 0.75 | 0.03 | 0 | 0 |
| 70 | 2 | End | Endothelial cells | combined | APLNR | 187 | 339 | 1.69 | 0.73 | 0.003 | 0 | 0 |
| 70 | 2 | End | Endothelial cells | combined | TMEM88 | 92162 | 32371 | 1.69 | 0.72 | 0.02 | 0 | 0 |
| 70 | 2 | End | Endothelial cells | combined | HLA-E | 3133 | 4962 | 1.69 | 0.83 | 0.17 | 1.8459444900129E-266 | 6.2197253646495E-262 |
| 70 | 2 | End | Endothelial cells | combined | ICAM2 | 3384 | 5345 | 1.66 | 0.72 | 0.006 | 0 | 0 |
| 70 | 2 | End | Endothelial cells | combined | HLA-B | 3106 | 4932 | 1.65 | 0.79 | 0.12 | 0 | 0 |
| 70 | 2 | End | Endothelial cells | combined | ESAM | 90952 | 17474 | 1.61 | 0.75 | 0.05 | 0 | 0 |
| 70 | 2 | End | Endothelial cells | combined | HSPB1 | 3315 | 5246 | 1.6 | 0.96 | 0.56 | 1.3177684212393E-157 | 4.4400889185238E-153 |
| 70 | 2 | End | Endothelial cells | combined | HLA-DRA | 3122 | 4947 | 1.57 | 0.57 | 0.01 | 0 | 0 |
| 70 | 2 | End | Endothelial cells | combined | CD34 | 947 | 1662 | 1.55 | 0.68 | 0.007 | 0 | 0 |
| 70 | 2 | End | Endothelial cells | combined | EMCN | 51705 | 16041 | 1.52 | 0.73 | 0.08 | 0 | 0 |
| 70 | 2 | End | Endothelial cells | combined | HSPG2 | 3339 | 5273 | 1.51 | 0.67 | 0.08 | 0 | 0 |
| 70 | 2 | End | Endothelial cells | combined | ECSCR | 641700 | 35454 | 1.49 | 0.64 | 0.004 | 0 | 0 |
| 70 | 2 | End | Endothelial cells | combined | VAMP5 | 10791 | 12646 | 1.49 | 0.85 | 0.25 | 1.7656098429175E-190 | 5.9490458047262E-186 |
| 70 | 2 | End | Endothelial cells | combined | GMFG | 9535 | 4374 | 1.48 | 0.66 | 0.01 | 0 | 0 |
| 70 | 2 | End | Endothelial cells | combined | RBP5 | 83758 | 15847 | 1.47 | 0.63 | 0.01 | 0 | 0 |
| 70 | 2 | End | Endothelial cells | combined | TCIM | 56892 | 1357 | 1.45 | 0.66 | 0.14 | 2.7934505708672E-176 | 9.41225235348E-172 |
| 70 | 2 | End | Endothelial cells | combined | CCDC85B | 11007 | 24926 | 1.45 | 0.8 | 0.19 | 1.8046707837148E-230 | 6.0806577386488E-226 |
| 70 | 2 | End | Endothelial cells | combined | HLA-DRB1 | 3123 | 4948 | 1.43 | 0.6 | 0.03 | 0 | 0 |
| 70 | 2 | End | Endothelial cells | combined | HLA-C | 3107 | 4933 | 1.42 | 0.74 | 0.17 | 2.8383549178584E-196 | 9.5635530602323E-192 |
| 70 | 2 | End | Endothelial cells | combined | ITM2A | 9452 | 6173 | 1.42 | 0.7 | 0.06 | 0 | 0 |
| 70 | 2 | End | Endothelial cells | combined | SLC2A3 | 6515 | 11007 | 1.42 | 0.57 | 0.09 | 1.3377180063309E-197 | 4.5073070505314E-193 |
| 70 | 2 | End | Endothelial cells | combined | S100A10 | 6281 | 10487 | 1.41 | 0.86 | 0.29 | 2.1683130378258E-168 | 7.3059139496502E-164 |
| 70 | 2 | End | Endothelial cells | combined | CCL2 | 6347 | 10618 | 1.41 | 0.41 | 0.03 | 6.0332674769396E-236 | 2.03284914368E-231 |
| 70 | 2 | End | Endothelial cells | combined | FN1 | 2335 | 3778 | 1.4 | 0.68 | 0.11 | 7.71693331953E-243 | 2.6001435126824E-238 |
| 70 | 2 | End | Endothelial cells | combined | MEF2C | 4208 | 6996 | 1.39 | 0.66 | 0.03 | 0 | 0 |
| 70 | 2 | End | Endothelial cells | combined | S100A16 | 140576 | 20441 | 1.34 | 0.81 | 0.29 | 5.0729675267627E-151 | 1.7092856784674E-146 |
| 70 | 2 | End | Endothelial cells | combined | THY1 | 7070 | 11801 | 1.33 | 0.64 | 0.09 | 6.9252773161903E-248 | 2.3334029389172E-243 |
| 70 | 2 | End | Endothelial cells | combined | PECAM1 | 5175 | 8823 | 1.32 | 0.6 | 0.003 | 0 | 0 |
| 70 | 2 | End | Endothelial cells | combined | COTL1 | 23406 | 18304 | 1.32 | 0.83 | 0.38 | 5.2220933688454E-121 | 1.7595321396987E-116 |
| 70 | 2 | End | Endothelial cells | combined | A2M | 2 | 7 | 1.31 | 0.62 | 0.02 | 0 | 0 |
| 70 | 2 | End | Endothelial cells | combined | TM4SF18 | 116441 | 25181 | 1.31 | 0.58 | 0.003 | 0 | 0 |
| 70 | 2 | End | Endothelial cells | combined | RHOC | 389 | 669 | 1.3 | 0.86 | 0.35 | 6.7115676512977E-154 | 2.2613956044282E-149 |
| 70 | 2 | End | Endothelial cells | combined | ENG | 2022 | 3349 | 1.28 | 0.55 | 0.03 | 0 | 0 |
| 70 | 2 | End | Endothelial cells | combined | LGALS1 | 3956 | 6561 | 1.26 | 0.79 | 0.23 | 1.3379045730855E-127 | 4.5079356685543E-123 |
| 70 | 2 | End | Endothelial cells | combined | NRP2 | 8828 | 8005 | 1.25 | 0.68 | 0.16 | 9.9533991891707E-165 | 3.3536983227992E-160 |
| 70 | 2 | End | Endothelial cells | combined | KANK3 | 256949 | 24796 | 1.25 | 0.59 | 0.007 | 0 | 0 |
| 70 | 2 | End | Endothelial cells | combined | CDH5 | 1003 | 1764 | 1.25 | 0.59 | 0.003 | 0 | 0 |
| 70 | 2 | End | Endothelial cells | combined | TMSB10 | 9168 | 11879 | 1.25 | 0.99 | 0.94 | 9.3996742858719E-157 | 3.1671262538817E-152 |
| 70 | 2 | End | Endothelial cells | combined | FAM167B | 84734 | 28133 | 1.25 | 0.49 | 0.004 | 0 | 0 |
| 70 | 2 | End | Endothelial cells | combined | PLPP3 | 8613 | 9229 | 1.25 | 0.76 | 0.23 | 3.5508519847337E-144 | 1.1964240677362E-139 |
| 70 | 2 | End | Endothelial cells | combined | CRHBP | 1393 | 2356 | 1.21 | 0.43 | 0.003 | 0 | 0 |
| 70 | 2 | End | Endothelial cells | combined | CRIP2 | 1397 | 2361 | 1.2 | 0.81 | 0.36 | 1.3112289922537E-112 | 4.4180549664995E-108 |
| 70 | 2 | End | Endothelial cells | combined | GYPC | 2995 | 4704 | 1.19 | 0.74 | 0.25 | 4.8382253541687E-135 | 1.6301916508336E-130 |
| 70 | 2 | End | Endothelial cells | combined | IL32 | 9235 | 16830 | 1.17 | 0.32 | 0.01 | 0 | 0 |
| 70 | 2 | End | Endothelial cells | combined | NPDC1 | 56654 | 7899 | 1.15 | 0.63 | 0.13 | 8.9931830650118E-176 | 3.0301631019251E-171 |
| 70 | 2 | End | Endothelial cells | combined | GIMAP7 | 168537 | 22404 | 1.12 | 0.48 | 0.002 | 0 | 0 |
| 70 | 2 | End | Endothelial cells | combined | SPTBN1 | 6711 | 11275 | 1.11 | 0.68 | 0.21 | 1.3328570111465E-121 | 4.4909284133571E-117 |
| 70 | 2 | End | Endothelial cells | combined | HLA-A | 3105 | 4931 | 1.09 | 0.87 | 0.42 | 3.0746022190929E-112 | 1.0359564717012E-107 |
| 70 | 2 | End | Endothelial cells | combined | CLEC14A | 161198 | 19832 | 1.09 | 0.43 | 0.005 | 0 | 0 |
| 70 | 2 | End | Endothelial cells | combined | KLF2 | 10365 | 6347 | 1.08 | 0.52 | 0.06 | 6.7066498257009E-235 | 2.2597385922716E-230 |
| 70 | 2 | End | Endothelial cells | combined | PCAT19 | 100505495 | 49593 | 1.07 | 0.51 | 0.002 | 0 | 0 |
| 70 | 2 | End | Endothelial cells | combined | TIE1 | 7075 | 11809 | 1.06 | 0.5 | 0.003 | 0 | 0 |
| 70 | 2 | End | Endothelial cells | combined | RAMP3 | 10268 | 9845 | 1.05 | 0.38 | 0.006 | 0 | 0 |
| 70 | 2 | End | Endothelial cells | combined | HLA-DRB5 | 3127 | 4953 | 1.04 | 0.4 | 0.01 | 0 | 0 |
| 70 | 2 | End | Endothelial cells | combined | CAVIN1 | 284119 | 9688 | 1.04 | 0.54 | 0.07 | 8.8022522982009E-219 | 2.9658308893558E-214 |
| 70 | 2 | End | Endothelial cells | combined | CCL21 | 6366 | 10620 | 1.03 | 0.44 | 0.002 | 0 | 0 |
| 70 | 2 | End | Endothelial cells | combined | CALM1 | 801 | 1442 | 1.03 | 0.91 | 0.61 | 9.1336098259576E-98 | 3.0774784947581E-93 |
| 70 | 2 | End | Endothelial cells | combined | FKBP1A | 2280 | 3711 | 1.02 | 0.95 | 0.7 | 1.3574225442316E-107 | 4.5736995205341E-103 |
| 70 | 2 | End | Endothelial cells | combined | FXYD6 | 53826 | 4030 | 1 | 0.73 | 0.3 | 2.3636055512318E-98 | 7.9639325443203E-94 |
| 70 | 2 | End | Endothelial cells | combined | GIMAP4 | 55303 | 21872 | 1 | 0.4 | 0.002 | 0 | 0 |
| 70 | 2 | End | Endothelial cells | combined | FCGRT | 2217 | 3621 | 1 | 0.76 | 0.33 | 2.660154546587E-93 | 8.9631247292701E-89 |
| 70 | 2 | End | Endothelial cells | combined | NOSTRIN | 115677 | 20203 | 0.99 | 0.46 | 0.006 | 0 | 0 |
| 70 | 2 | End | Endothelial cells | combined | FLT1 | 2321 | 3763 | 0.99 | 0.41 | 0.006 | 0 | 0 |
| 70 | 2 | End | Endothelial cells | combined | MARCKS | 4082 | 6759 | 0.98 | 0.89 | 0.64 | 3.3177374718755E-82 | 1.1178784637737E-77 |
| 70 | 2 | End | Endothelial cells | combined | LMO2 | 4005 | 6642 | 0.98 | 0.47 | 0.02 | 0 | 0 |
| 70 | 2 | End | Endothelial cells | combined | PCDH17 | 27253 | 14267 | 0.98 | 0.5 | 0.07 | 8.5685185831587E-180 | 2.8870766514095E-175 |
| 70 | 2 | End | Endothelial cells | combined | IFITM3 | 10410 | 5414 | 0.98 | 0.93 | 0.68 | 1.2179198702376E-97 | 4.1036592107787E-93 |
| 70 | 2 | End | Endothelial cells | combined | TFPI | 7035 | 11760 | 0.97 | 0.42 | 0.04 | 4.6193482661323E-212 | 1.5564432047906E-207 |
| 70 | 2 | End | Endothelial cells | combined | ADGRL4 | 64123 | 20822 | 0.96 | 0.38 | 0.002 | 0 | 0 |
| 70 | 2 | End | Endothelial cells | combined | SH3BP5 | 9467 | 10827 | 0.95 | 0.59 | 0.17 | 2.8993520727817E-105 | 9.7690768740307E-101 |
| 70 | 2 | End | Endothelial cells | combined | ARHGDIB | 397 | 679 | 0.94 | 0.49 | 0.04 | 0 | 0 |
| 70 | 2 | End | Endothelial cells | combined | LDB2 | 9079 | 6533 | 0.94 | 0.5 | 0.07 | 5.0420661452123E-176 | 1.6988737669678E-171 |
| 70 | 2 | End | Endothelial cells | combined | MSN | 4478 | 7373 | 0.94 | 0.58 | 0.18 | 1.1256092785476E-96 | 3.7926279031383E-92 |
| 70 | 2 | End | Endothelial cells | combined | ARHGAP29 | 9411 | 30207 | 0.93 | 0.7 | 0.28 | 1.0405980336286E-85 | 3.5061910145083E-81 |
| 70 | 2 | End | Endothelial cells | combined | MYL12A | 10627 | 16701 | 0.93 | 0.96 | 0.73 | 2.2224770675535E-102 | 7.4884142314148E-98 |
| 70 | 2 | End | Endothelial cells | combined | NTS | 4922 | 8038 | 0.92 | 0.19 | 0.005 | 1.064023725041E-286 | 3.5851215391531E-282 |
| 70 | 2 | End | Endothelial cells | combined | GUK1 | 2987 | 4693 | 0.92 | 0.86 | 0.54 | 1.4546233444365E-89 | 4.9012078967443E-85 |
| 70 | 2 | End | Endothelial cells | combined | CD93 | 22918 | 15855 | 0.92 | 0.39 | 0.002 | 0 | 0 |
| 70 | 2 | End | Endothelial cells | combined | ELK3 | 2004 | 3325 | 0.91 | 0.47 | 0.03 | 0 | 0 |
| 70 | 2 | End | Endothelial cells | combined | KDR | 3791 | 6307 | 0.91 | 0.39 | 0.002 | 0 | 0 |
| 70 | 2 | End | Endothelial cells | combined | PLXND1 | 23129 | 9107 | 0.9 | 0.45 | 0.04 | 3.5034180056203E-237 | 1.1804416628137E-232 |
| 70 | 2 | End | Endothelial cells | combined | LYL1 | 4066 | 6734 | 0.89 | 0.44 | 0.005 | 0 | 0 |
| 70 | 2 | End | Endothelial cells | combined | CAVIN3 | 112464 | 9400 | 0.89 | 0.47 | 0.08 | 1.7161072421316E-128 | 5.7822517416383E-124 |
| 70 | 2 | End | Endothelial cells | combined | PLAT | 5327 | 9051 | 0.89 | 0.45 | 0.14 | 2.946456371565E-54 | 9.927790098351E-50 |
| 70 | 2 | End | Endothelial cells | combined | TSPO | 706 | 1158 | 0.89 | 0.58 | 0.15 | 1.2940268201492E-108 | 4.3600939678108E-104 |
| 70 | 2 | End | Endothelial cells | combined | TMEM204 | 79652 | 14158 | 0.89 | 0.43 | 0.03 | 0 | 0 |
| 70 | 2 | End | Endothelial cells | combined | LINC00305 | 221241 | 28597 | 0.88 | 0.3 | 0.002 | 0 | 0 |
| 70 | 2 | End | Endothelial cells | combined | ISG15 | 9636 | 4053 | 0.88 | 0.52 | 0.07 | 1.0997925284744E-207 | 3.7056409454416E-203 |
| 70 | 2 | End | Endothelial cells | combined | DNASE1L3 | 1776 | 2959 | 0.87 | 0.22 | 0.001 | 0 | 0 |