Marker Genes
Dataset: Single-cell transcriptomics reveals gene expression dynamics of human fetal kidney development
- tissue: Kidney
- ontology: Kidney
- genotype: -
- stage: Fetal
- treatment condition: WT
- cell/nucleus: Cells
- pmid: 30789893
- subset name: combined
- total genes: Not reported
- clustering: scran
- pseudotime: Monocle 2
- link: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE114530
Rows:100
dataset id | cluster id | cluster name | cell type name | sample id | gene symbol | entrez geneid | species specific geneid |
avg log fc (?)
|
pct 1 | pct 2 | p value | padj |
---|---|---|---|---|---|---|---|---|---|---|---|---|
70 | 19 | SSBpod | S-shaped body podocyte precursor cells | combined | OLFM3 | 118427 | 17990 | 1.73 | 0.89 | 0.13 | 0 | 0 |
70 | 19 | SSBpod | S-shaped body podocyte precursor cells | combined | CCN2 | 1490 | 2500 | 1.35 | 0.95 | 0.63 | 8.15140038319344e-214 | 2.7465328451132e-209 |
70 | 19 | SSBpod | S-shaped body podocyte precursor cells | combined | MAFB | 9935 | 6408 | 1.21 | 0.99 | 0.43 | 1.36757766931764e-288 | 4.60791619899887e-284 |
70 | 19 | SSBpod | S-shaped body podocyte precursor cells | combined | BST2 | 684 | 1119 | 1.07 | 0.92 | 0.5 | 3.81968979299624e-193 | 1.28700627885215e-188 |
70 | 19 | SSBpod | S-shaped body podocyte precursor cells | combined | COL13A1 | 1305 | 2190 | 1.06 | 0.6 | 0.12 | 5.98527807918837e-298 | 2.01667959600173e-293 |
70 | 19 | SSBpod | S-shaped body podocyte precursor cells | combined | SLC16A1 | 6566 | 10922 | 0.98 | 0.63 | 0.23 | 1.40725693625914e-169 | 4.74161152103153e-165 |
70 | 19 | SSBpod | S-shaped body podocyte precursor cells | combined | LOXL1 | 4016 | 6665 | 0.92 | 0.81 | 0.31 | 9.73076629226788e-200 | 3.27868439451674e-195 |
70 | 19 | SSBpod | S-shaped body podocyte precursor cells | combined | EIF3M | 10480 | 24460 | 0.91 | 0.99 | 0.8 | 2.34037387763025e-230 | 7.88565574328738e-226 |
70 | 19 | SSBpod | S-shaped body podocyte precursor cells | combined | FBLN2 | 2199 | 3601 | 0.87 | 0.44 | 0.07 | 9.68664704990046e-266 | 3.26381885699346e-261 |
70 | 19 | SSBpod | S-shaped body podocyte precursor cells | combined | IGFBP4 | 3487 | 5473 | 0.84 | 0.84 | 0.43 | 1.22347147563438e-158 | 4.12236479000248e-154 |
70 | 19 | SSBpod | S-shaped body podocyte precursor cells | combined | TSC22D3 | 1831 | 3051 | 0.84 | 0.88 | 0.49 | 2.10761866987598e-157 | 7.10141034628012e-153 |
70 | 19 | SSBpod | S-shaped body podocyte precursor cells | combined | C17orf58 | 284018 | 27568 | 0.82 | 0.57 | 0.17 | 1.94230290855304e-175 | 6.54439542007862e-171 |
70 | 19 | SSBpod | S-shaped body podocyte precursor cells | combined | PCDH9 | 5101 | 8661 | 0.81 | 0.63 | 0.21 | 8.52587582780108e-168 | 2.8727086014193e-163 |
70 | 19 | SSBpod | S-shaped body podocyte precursor cells | combined | LEFTY1 | 10637 | 6552 | 0.81 | 0.44 | 0.11 | 3.38837235356304e-143 | 1.14167818080953e-138 |
70 | 19 | SSBpod | S-shaped body podocyte precursor cells | combined | TESC | 54997 | 26065 | 0.81 | 0.47 | 0.07 | 2.86224255117512e-305 | 9.64404005192946e-301 |
70 | 19 | SSBpod | S-shaped body podocyte precursor cells | combined | KRT19 | 3880 | 6436 | 0.8 | 0.62 | 0.32 | 2.82358445671031e-92 | 9.51378546843971e-88 |
70 | 19 | SSBpod | S-shaped body podocyte precursor cells | combined | MVB12A | 93343 | 25153 | 0.79 | 0.77 | 0.37 | 9.21404978441538e-140 | 3.10458193436092e-135 |
70 | 19 | SSBpod | S-shaped body podocyte precursor cells | combined | TPM1 | 7168 | 12010 | 0.76 | 0.84 | 0.59 | 2.37449574924219e-83 | 8.00062597749664e-79 |
70 | 19 | SSBpod | S-shaped body podocyte precursor cells | combined | TSPAN8 | 7103 | 11855 | 0.74 | 0.37 | 0.08 | 1.55080228507801e-155 | 5.22527321934183e-151 |
70 | 19 | SSBpod | S-shaped body podocyte precursor cells | combined | PLPP3 | 8613 | 9229 | 0.74 | 0.6 | 0.23 | 3.05898756468006e-136 | 1.0306952700433e-131 |
70 | 19 | SSBpod | S-shaped body podocyte precursor cells | combined | ORC4 | 5000 | 8490 | 0.73 | 0.74 | 0.35 | 8.21102182775957e-134 | 2.76662169464531e-129 |
70 | 19 | SSBpod | S-shaped body podocyte precursor cells | combined | CLDN5 | 7122 | 2047 | 0.73 | 0.83 | 0.31 | 1.75290442224965e-170 | 5.90623616032797e-166 |
70 | 19 | SSBpod | S-shaped body podocyte precursor cells | combined | PAX8 | 7849 | 8622 | 0.72 | 0.76 | 0.37 | 9.45519976279459e-122 | 3.18583500807601e-117 |
70 | 19 | SSBpod | S-shaped body podocyte precursor cells | combined | PLOD2 | 5352 | 9082 | 0.71 | 0.77 | 0.38 | 7.60126660243523e-128 | 2.56117076902453e-123 |
70 | 19 | SSBpod | S-shaped body podocyte precursor cells | combined | NTRK2 | 4915 | 8032 | 0.71 | 0.8 | 0.4 | 1.11191048999436e-127 | 3.74647120498699e-123 |
70 | 19 | SSBpod | S-shaped body podocyte precursor cells | combined | EFNB2 | 1948 | 3227 | 0.69 | 0.64 | 0.29 | 8.54452689892195e-110 | 2.87899289332276e-105 |
70 | 19 | SSBpod | S-shaped body podocyte precursor cells | combined | LHX1 | 3975 | 6593 | 0.67 | 0.59 | 0.23 | 1.65217875871736e-114 | 5.56685110962229e-110 |
70 | 19 | SSBpod | S-shaped body podocyte precursor cells | combined | EFNB1 | 1947 | 3226 | 0.65 | 0.79 | 0.43 | 8.21488165397919e-109 | 2.76792222449175e-104 |
70 | 19 | SSBpod | S-shaped body podocyte precursor cells | combined | CTTNBP2 | 83992 | 15679 | 0.65 | 0.54 | 0.18 | 8.46189650713199e-132 | 2.85115140911305e-127 |
70 | 19 | SSBpod | S-shaped body podocyte precursor cells | combined | SOST | 50964 | 13771 | 0.64 | 0.83 | 0.26 | 3.18977304558838e-193 | 1.07476212998055e-188 |
70 | 19 | SSBpod | S-shaped body podocyte precursor cells | combined | IL1R1 | 3554 | 5993 | 0.64 | 0.34 | 0.05 | 1.86983027185001e-234 | 6.30020611797143e-230 |
70 | 19 | SSBpod | S-shaped body podocyte precursor cells | combined | HS3ST3B1 | 9953 | 5198 | 0.64 | 0.52 | 0.17 | 4.83824518837417e-124 | 1.63019833377079e-119 |
70 | 19 | SSBpod | S-shaped body podocyte precursor cells | combined | DSC2 | 1824 | 3036 | 0.64 | 0.51 | 0.17 | 5.1893381755192e-120 | 1.74849560485944e-115 |
70 | 19 | SSBpod | S-shaped body podocyte precursor cells | combined | IL18 | 3606 | 5986 | 0.63 | 0.29 | 0.02 | 0 | 0 |
70 | 19 | SSBpod | S-shaped body podocyte precursor cells | combined | BISPR | 105221694 | 51290 | 0.62 | 0.38 | 0.07 | 4.09113485641109e-172 | 1.37846697851915e-167 |
70 | 19 | SSBpod | S-shaped body podocyte precursor cells | combined | SPINT2 | 10653 | 11247 | 0.61 | 0.93 | 0.61 | 1.53483944463606e-112 | 5.17148802475672e-108 |
70 | 19 | SSBpod | S-shaped body podocyte precursor cells | combined | SQOR | 58472 | 20390 | 0.61 | 0.46 | 0.11 | 2.71644485392679e-157 | 9.15278929082094e-153 |
70 | 19 | SSBpod | S-shaped body podocyte precursor cells | combined | WT1 | 7490 | 12796 | 0.61 | 0.94 | 0.53 | 5.11398352125467e-131 | 1.72310560765155e-126 |
70 | 19 | SSBpod | S-shaped body podocyte precursor cells | combined | PPIB | 5479 | 9255 | 0.61 | 0.95 | 0.78 | 4.77658929815175e-113 | 1.60942399811925e-108 |
70 | 19 | SSBpod | S-shaped body podocyte precursor cells | combined | CRTAC1 | 55118 | 14882 | 0.6 | 0.31 | 0.05 | 2.331609089161e-166 | 7.85612366501909e-162 |
70 | 19 | SSBpod | S-shaped body podocyte precursor cells | combined | PMP22 | 5376 | 9118 | 0.59 | 0.34 | 0.15 | 5.63514591860177e-48 | 1.89870606581368e-43 |
70 | 19 | SSBpod | S-shaped body podocyte precursor cells | combined | HSP90B1 | 7184 | 12028 | 0.58 | 0.96 | 0.82 | 8.05960423885312e-105 | 2.71560305223917e-100 |
70 | 19 | SSBpod | S-shaped body podocyte precursor cells | combined | PDIA4 | 9601 | 30167 | 0.58 | 0.76 | 0.49 | 4.52733928959238e-79 | 1.52544170023526e-74 |
70 | 19 | SSBpod | S-shaped body podocyte precursor cells | combined | MIR503HG | 84848 | 28258 | 0.57 | 0.37 | 0.1 | 5.78865680683931e-113 | 1.95043002449644e-108 |
70 | 19 | SSBpod | S-shaped body podocyte precursor cells | combined | ITIH5 | 80760 | 21449 | 0.57 | 0.37 | 0.09 | 3.57504252817696e-127 | 1.20457482944394e-122 |
70 | 19 | SSBpod | S-shaped body podocyte precursor cells | combined | NID2 | 22795 | 13389 | 0.56 | 0.34 | 0.08 | 7.43957282242942e-120 | 2.50668966678937e-115 |
70 | 19 | SSBpod | S-shaped body podocyte precursor cells | combined | FOXC2 | 2303 | 3801 | 0.55 | 0.68 | 0.34 | 1.40079203590434e-81 | 4.71982868577609e-77 |
70 | 19 | SSBpod | S-shaped body podocyte precursor cells | combined | GALNT2 | 2590 | 4124 | 0.54 | 0.44 | 0.14 | 1.22912639681665e-108 | 4.14141848143402e-104 |
70 | 19 | SSBpod | S-shaped body podocyte precursor cells | combined | PPP1R9A | 55607 | 14946 | 0.54 | 0.44 | 0.18 | 4.49792032579668e-72 | 1.51552927457393e-67 |
70 | 19 | SSBpod | S-shaped body podocyte precursor cells | combined | CELF2 | 10659 | 2550 | 0.54 | 0.38 | 0.12 | 6.010496317402e-90 | 2.02517662918543e-85 |
70 | 19 | SSBpod | S-shaped body podocyte precursor cells | combined | UQCRFS1 | 7386 | 12587 | 0.53 | 0.83 | 0.61 | 4.69948773775218e-75 | 1.58344539835822e-70 |
70 | 19 | SSBpod | S-shaped body podocyte precursor cells | combined | HIPK2 | 28996 | 14402 | 0.53 | 0.65 | 0.36 | 6.59289180978436e-76 | 2.22140896638874e-71 |
70 | 19 | SSBpod | S-shaped body podocyte precursor cells | combined | NPHS1 | 4868 | 7908 | 0.53 | 0.65 | 0.22 | 1.3887902736503e-125 | 4.67938994803731e-121 |
70 | 19 | SSBpod | S-shaped body podocyte precursor cells | combined | EMID1 | 129080 | 18036 | 0.53 | 0.48 | 0.22 | 1.07733419203202e-71 | 3.62996982663269e-67 |
70 | 19 | SSBpod | S-shaped body podocyte precursor cells | combined | TSPAN5 | 10098 | 17753 | 0.52 | 0.49 | 0.17 | 4.1717085559686e-96 | 1.40561548084806e-91 |
70 | 19 | SSBpod | S-shaped body podocyte precursor cells | combined | FBXO21 | 23014 | 13592 | 0.51 | 0.59 | 0.34 | 3.76927576222695e-58 | 1.27001977532475e-53 |
70 | 19 | SSBpod | S-shaped body podocyte precursor cells | combined | SFXN2 | 118980 | 16086 | 0.51 | 0.37 | 0.1 | 3.0382020157425e-109 | 1.02369178718428e-104 |
70 | 19 | SSBpod | S-shaped body podocyte precursor cells | combined | NDUFB9 | 4715 | 7704 | 0.51 | 0.89 | 0.68 | 3.49807519045247e-84 | 1.17864145467105e-79 |
70 | 19 | SSBpod | S-shaped body podocyte precursor cells | combined | E2F3 | 1871 | 3115 | 0.51 | 0.31 | 0.09 | 2.67187674454847e-89 | 9.0026215030816e-85 |
70 | 19 | SSBpod | S-shaped body podocyte precursor cells | combined | NRP2 | 8828 | 8005 | 0.5 | 0.44 | 0.16 | 2.7412442976759e-83 | 9.23634853658919e-79 |
70 | 19 | SSBpod | S-shaped body podocyte precursor cells | combined | TSPAN3 | 10099 | 17752 | 0.5 | 0.87 | 0.61 | 4.07029366646516e-79 | 1.37144474797877e-74 |
70 | 19 | SSBpod | S-shaped body podocyte precursor cells | combined | ATP1A1 | 476 | 799 | 0.49 | 0.67 | 0.45 | 2.1570285763537e-50 | 7.26789208516615e-46 |
70 | 19 | SSBpod | S-shaped body podocyte precursor cells | combined | C5orf15 | 56951 | 20656 | 0.49 | 0.7 | 0.44 | 2.40209365240412e-62 | 8.09361435241045e-58 |
70 | 19 | SSBpod | S-shaped body podocyte precursor cells | combined | REXO2 | 25996 | 17851 | 0.48 | 0.54 | 0.31 | 5.57457269507486e-47 | 1.87829652387852e-42 |
70 | 19 | SSBpod | S-shaped body podocyte precursor cells | combined | LAMB1 | 3912 | 6486 | 0.48 | 0.42 | 0.2 | 1.18276786861368e-55 | 3.98521805650693e-51 |
70 | 19 | SSBpod | S-shaped body podocyte precursor cells | combined | PSMD8 | 5714 | 9566 | 0.48 | 0.83 | 0.64 | 1.75261557264851e-66 | 5.90526291048187e-62 |
70 | 19 | SSBpod | S-shaped body podocyte precursor cells | combined | WT1-AS | 51352 | 18135 | 0.48 | 0.55 | 0.25 | 5.18482619259505e-67 | 1.74697533733297e-62 |
70 | 19 | SSBpod | S-shaped body podocyte precursor cells | combined | CAVIN2 | 8436 | 10690 | 0.47 | 0.25 | 0.04 | 1.01932852297179e-142 | 3.43452552530114e-138 |
70 | 19 | SSBpod | S-shaped body podocyte precursor cells | combined | CREG1 | 8804 | 2351 | 0.47 | 0.52 | 0.29 | 1.19431823244529e-51 | 4.02413585240115e-47 |
70 | 19 | SSBpod | S-shaped body podocyte precursor cells | combined | VAMP5 | 10791 | 12646 | 0.47 | 0.55 | 0.25 | 2.67284739811532e-65 | 9.00589202320977e-61 |
70 | 19 | SSBpod | S-shaped body podocyte precursor cells | combined | IGFBP2 | 3485 | 5471 | 0.46 | 0.66 | 0.47 | 9.39313951521759e-35 | 3.16492442825742e-30 |
70 | 19 | SSBpod | S-shaped body podocyte precursor cells | combined | CANX | 821 | 1473 | 0.46 | 0.81 | 0.59 | 3.16387371896979e-63 | 1.06603561086968e-58 |
70 | 19 | SSBpod | S-shaped body podocyte precursor cells | combined | GPC6 | 10082 | 4454 | 0.46 | 0.42 | 0.16 | 1.72422693773043e-72 | 5.8096102439889e-68 |
70 | 19 | SSBpod | S-shaped body podocyte precursor cells | combined | NES | 10763 | 7756 | 0.46 | 0.75 | 0.33 | 4.26413154762804e-97 | 1.43675648365779e-92 |
70 | 19 | SSBpod | S-shaped body podocyte precursor cells | combined | PSMA4 | 5685 | 9533 | 0.46 | 0.94 | 0.77 | 3.6545040594056e-83 | 1.23134859777612e-78 |
70 | 19 | SSBpod | S-shaped body podocyte precursor cells | combined | SYTL1 | 84958 | 15584 | 0.45 | 0.34 | 0.09 | 1.74545954811685e-100 | 5.88115140142491e-96 |
70 | 19 | SSBpod | S-shaped body podocyte precursor cells | combined | DNMT3A | 1788 | 2978 | 0.45 | 0.43 | 0.2 | 4.39880458391478e-57 | 1.48213321650425e-52 |
70 | 19 | SSBpod | S-shaped body podocyte precursor cells | combined | EFEMP1 | 2202 | 3218 | 0.44 | 0.49 | 0.23 | 4.89980838600217e-60 | 1.65094143757957e-55 |
70 | 19 | SSBpod | S-shaped body podocyte precursor cells | combined | MXRA8 | 54587 | 7542 | 0.44 | 0.9 | 0.44 | 5.67971421267883e-114 | 1.91372290682001e-109 |
70 | 19 | SSBpod | S-shaped body podocyte precursor cells | combined | PDIA6 | 10130 | 30168 | 0.44 | 0.95 | 0.81 | 2.96694241946787e-72 | 9.99681578815504e-68 |
70 | 19 | SSBpod | S-shaped body podocyte precursor cells | combined | RGS3 | 5998 | 9999 | 0.44 | 0.48 | 0.22 | 1.83619630905756e-57 | 6.18687984373854e-53 |
70 | 19 | SSBpod | S-shaped body podocyte precursor cells | combined | STMP1 | 647087 | 41909 | 0.44 | 0.73 | 0.54 | 7.94052052994474e-45 | 2.67547898735958e-40 |
70 | 19 | SSBpod | S-shaped body podocyte precursor cells | combined | COX6C | 1345 | 2285 | 0.44 | 0.92 | 0.78 | 2.2774655332196e-64 | 7.67369236763013e-60 |
70 | 19 | SSBpod | S-shaped body podocyte precursor cells | combined | PSMB6 | 5694 | 9543 | 0.44 | 0.86 | 0.65 | 1.98345858215202e-63 | 6.68306534670302e-59 |
70 | 19 | SSBpod | S-shaped body podocyte precursor cells | combined | HEY1 | 23462 | 4880 | 0.44 | 0.42 | 0.25 | 2.0208925974781e-27 | 6.8091955179427e-23 |
70 | 19 | SSBpod | S-shaped body podocyte precursor cells | combined | PPP1R1A | 5502 | 9286 | 0.43 | 0.28 | 0.1 | 3.58461768443188e-55 | 1.20780108259248e-50 |
70 | 19 | SSBpod | S-shaped body podocyte precursor cells | combined | MYDGF | 56005 | 16948 | 0.43 | 0.74 | 0.54 | 1.5915724836216e-43 | 5.36264432631462e-39 |
70 | 19 | SSBpod | S-shaped body podocyte precursor cells | combined | FYN | 2534 | 4037 | 0.43 | 0.51 | 0.27 | 1.06155476951335e-50 | 3.5768026403983e-46 |
70 | 19 | SSBpod | S-shaped body podocyte precursor cells | combined | CNDP2 | 55748 | 24437 | 0.43 | 0.53 | 0.3 | 4.65670314037121e-46 | 1.56902955611668e-41 |
70 | 19 | SSBpod | S-shaped body podocyte precursor cells | combined | SORL1 | 6653 | 11185 | 0.43 | 0.29 | 0.08 | 1.02636121429845e-78 | 3.4582214754572e-74 |
70 | 19 | SSBpod | S-shaped body podocyte precursor cells | combined | GOLM1 | 51280 | 15451 | 0.42 | 0.51 | 0.29 | 4.93170738255229e-43 | 1.66168948547717e-38 |
70 | 19 | SSBpod | S-shaped body podocyte precursor cells | combined | TRAM2 | 9697 | 16855 | 0.42 | 0.38 | 0.15 | 4.19780418102214e-62 | 1.4144081407536e-57 |
70 | 19 | SSBpod | S-shaped body podocyte precursor cells | combined | ADI1 | 55256 | 30576 | 0.42 | 0.64 | 0.4 | 3.29200372922485e-49 | 1.10920773652502e-44 |
70 | 19 | SSBpod | S-shaped body podocyte precursor cells | combined | NOTCH2 | 4853 | 7882 | 0.42 | 0.46 | 0.25 | 1.55357829042647e-42 | 5.23462669176296e-38 |
70 | 19 | SSBpod | S-shaped body podocyte precursor cells | combined | SEC61B | 10952 | 16993 | 0.42 | 0.87 | 0.72 | 2.96645483601631e-54 | 9.99517292447334e-50 |
70 | 19 | SSBpod | S-shaped body podocyte precursor cells | combined | CHST2 | 9435 | 1970 | 0.42 | 0.27 | 0.08 | 3.35039143347547e-68 | 1.12888088959523e-63 |
70 | 19 | SSBpod | S-shaped body podocyte precursor cells | combined | ATP5F1A | 498 | 823 | 0.41 | 0.94 | 0.81 | 2.02220576193328e-67 | 6.81362009425799e-63 |
70 | 19 | SSBpod | S-shaped body podocyte precursor cells | combined | MTPN | 136319 | 15667 | 0.41 | 0.52 | 0.3 | 7.2083720871854e-42 | 2.42878889105625e-37 |
70 | 19 | SSBpod | S-shaped body podocyte precursor cells | combined | ENSG00000260469 | NULL | 0.41 | 0.21 | 0.03 | 5.07166416257681e-144 | 1.70884652293863e-139 | |
70 | 19 | SSBpod | S-shaped body podocyte precursor cells | combined | CLDN1 | 9076 | 2032 | 0.41 | 0.25 | 0.08 | 4.38314957882194e-61 | 1.47685841908827e-56 |